BCL3-1

Overview
NameBCL3-1
Smed IDSMED30019886
Length (bp)4395
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of BCL3-1 (SMED30019886) t-SNE clustered cells

Violin plots show distribution of expression levels for BCL3-1 (SMED30019886) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of BCL3-1 (SMED30019886) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for BCL3-1 (SMED30019886) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30019886

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 8

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30019886SMESG000023987.1 SMESG000017232.1 SMESG000080953.1 SMESG000080618.1 SMESG000072700.1 SMESG000069163.1 SMESG000065358.1 SMESG000064426.1 SMESG000062577.1 SMESG000062150.1 SMESG000060043.1 SMESG000057576.1 SMESG000056292.1 SMESG000054362.1 SMESG000052870.1 SMESG000051517.1 SMESG000050768.1 SMESG000050005.1 SMESG000049698.1 SMESG000045813.1 SMESG000041318.1 SMESG000040743.1 SMESG000039279.1 SMESG000038973.1 SMESG000038321.1 SMESG000029893.1 SMESG000028198.1 SMESG000023025.1 SMESG000021897.1 SMESG000018432.1 SMESG000018410.1 SMESG000017430.1 SMESG000006729.1 SMESG000005334.1 dd_Smed_v4_1692_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30019886SMESG000023987.1 SMESG000017232.1 SMESG000080953.1 SMESG000080618.1 SMESG000072700.1 SMESG000069163.1 SMESG000065358.1 SMESG000064426.1 SMESG000062577.1 SMESG000062150.1 SMESG000060043.1 SMESG000057576.1 SMESG000056292.1 SMESG000054362.1 SMESG000052870.1 SMESG000051517.1 SMESG000050768.1 SMESG000050005.1 SMESG000049698.1 SMESG000045813.1 SMESG000041318.1 SMESG000040743.1 SMESG000039279.1 SMESG000038973.1 SMESG000038321.1 SMESG000029893.1 SMESG000028198.1 SMESG000023025.1 SMESG000021897.1 SMESG000018432.1 SMESG000018410.1 SMESG000017430.1 SMESG000006729.1 SMESG000005334.1 dd_Smed_v4_1692_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30019886SMESG000023987.1 SMESG000017232.1 SMESG000080953.1 SMESG000080618.1 SMESG000072700.1 SMESG000069163.1 SMESG000065358.1 SMESG000064426.1 SMESG000062577.1 SMESG000062150.1 SMESG000060043.1 SMESG000057576.1 SMESG000056292.1 SMESG000054362.1 SMESG000052870.1 SMESG000051517.1 SMESG000050768.1 SMESG000050005.1 SMESG000049698.1 SMESG000045813.1 SMESG000041318.1 SMESG000040743.1 SMESG000039279.1 SMESG000038973.1 SMESG000038321.1 SMESG000029893.1 SMESG000028198.1 SMESG000023025.1 SMESG000021897.1 SMESG000018432.1 SMESG000018410.1 SMESG000017430.1 SMESG000006729.1 SMESG000005334.1 dd_Smed_v4_1692_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30019886SMESG000023987.1 SMESG000017232.1 SMESG000080953.1 SMESG000080618.1 SMESG000072700.1 SMESG000069163.1 SMESG000065358.1 SMESG000064426.1 SMESG000062577.1 SMESG000062150.1 SMESG000060043.1 SMESG000057576.1 SMESG000056292.1 SMESG000054362.1 SMESG000052870.1 SMESG000051517.1 SMESG000050768.1 SMESG000050005.1 SMESG000049698.1 SMESG000045813.1 SMESG000041318.1 SMESG000040743.1 SMESG000039279.1 SMESG000038973.1 SMESG000038321.1 SMESG000029893.1 SMESG000028198.1 SMESG000023025.1 SMESG000021897.1 SMESG000018432.1 SMESG000018410.1 SMESG000017430.1 SMESG000006729.1 SMESG000005334.1 dd_Smed_v4_1692_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30019886SMESG000023987.1 SMESG000017232.1 SMESG000080953.1 SMESG000080618.1 SMESG000072700.1 SMESG000069163.1 SMESG000065358.1 SMESG000064426.1 SMESG000062577.1 SMESG000062150.1 SMESG000060043.1 SMESG000057576.1 SMESG000056292.1 SMESG000054362.1 SMESG000052870.1 SMESG000051517.1 SMESG000050768.1 SMESG000050005.1 SMESG000049698.1 SMESG000045813.1 SMESG000041318.1 SMESG000040743.1 SMESG000039279.1 SMESG000038973.1 SMESG000038321.1 SMESG000029893.1 SMESG000028198.1 SMESG000023025.1 SMESG000021897.1 SMESG000018432.1 SMESG000018410.1 SMESG000017430.1 SMESG000006729.1 SMESG000005334.1 dd_Smed_v4_1692_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30019886SMESG000023987.1 SMESG000017232.1 SMESG000080953.1 SMESG000080618.1 SMESG000072700.1 SMESG000069163.1 SMESG000065358.1 SMESG000064426.1 SMESG000062577.1 SMESG000062150.1 SMESG000060043.1 SMESG000057576.1 SMESG000056292.1 SMESG000054362.1 SMESG000052870.1 SMESG000051517.1 SMESG000050768.1 SMESG000050005.1 SMESG000049698.1 SMESG000045813.1 SMESG000041318.1 SMESG000040743.1 SMESG000039279.1 SMESG000038973.1 SMESG000038321.1 SMESG000029893.1 SMESG000028198.1 SMESG000023025.1 SMESG000021897.1 SMESG000018432.1 SMESG000018410.1 SMESG000017430.1 SMESG000006729.1 SMESG000005334.1 dd_Smed_v4_1692_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30019886SMESG000023987.1 SMESG000017232.1 SMESG000080953.1 SMESG000080618.1 SMESG000072700.1 SMESG000069163.1 SMESG000065358.1 SMESG000064426.1 SMESG000062577.1 SMESG000062150.1 SMESG000060043.1 SMESG000057576.1 SMESG000056292.1 SMESG000054362.1 SMESG000052870.1 SMESG000051517.1 SMESG000050768.1 SMESG000050005.1 SMESG000049698.1 SMESG000045813.1 SMESG000041318.1 SMESG000040743.1 SMESG000039279.1 SMESG000038973.1 SMESG000038321.1 SMESG000029893.1 SMESG000028198.1 SMESG000023025.1 SMESG000021897.1 SMESG000018432.1 SMESG000018410.1 SMESG000017430.1 SMESG000006729.1 SMESG000005334.1 dd_Smed_v4_1692_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30019886SMESG000023987.1 SMESG000017232.1 SMESG000080953.1 SMESG000080618.1 SMESG000072700.1 SMESG000069163.1 SMESG000065358.1 SMESG000064426.1 SMESG000062577.1 SMESG000062150.1 SMESG000060043.1 SMESG000057576.1 SMESG000056292.1 SMESG000054362.1 SMESG000052870.1 SMESG000051517.1 SMESG000050768.1 SMESG000050005.1 SMESG000049698.1 SMESG000045813.1 SMESG000041318.1 SMESG000040743.1 SMESG000039279.1 SMESG000038973.1 SMESG000038321.1 SMESG000029893.1 SMESG000028198.1 SMESG000023025.1 SMESG000021897.1 SMESG000018432.1 SMESG000018410.1 SMESG000017430.1 SMESG000006729.1 SMESG000005334.1 dd_Smed_v4_1692_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of BCL3-1 vs. TrEMBL
Match: T1E117 (BCL3-1 OS=Dendrocoelum lacteum OX=27895 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.231e-7
Identity = 51/185 (27.57%), Postives = 96/185 (51.89%), Query Frame = 2 
Query: 3461 RNKLKE--PQT-TKRQKSKY*SNQAKQEREYNEIYNDRMNYRKQMEAIIKIAKEIMPKWTRNKNITE--ILEGVTKMITNYAKG*KSTAEISILKKRMPILFTIIDIAGNTPLHHAIESENEERTMEIIEIMNQ-CGQHTNIRNEKGQTPMMIAVSRDASTKILRELLKTGSTLKENDNKGKTML 3997
            RNK  E  PQ    RQ +   S     E ++++ ++D  +     +  +   K+++      KN+ E  +L  + ++  ++A G K T  +  + K++P++F I D  G++PLH+AI    EER M+I++I++    +    +N    T +++A + DAS + + +LL  G +LK+ D  G   L
Sbjct:  261 RNKDDEGCPQYKIPRQITPAISENGISEYDFDDYFSDPASSLDSFQ-YVATNKQLL------KNVYEKKMLSKIARVGHDFAFGLKVTKFMDNVLKKLPVVFIIQDDVGDSPLHNAILKNQEERAMQILDIVSTWYPEDLFTKNTSDHTALILAPACDASPQFVTKLLSLGFSLKDKDIDGNNAL 438
[Close]
BLAST of BCL3-1 vs. TrEMBL
Match: A0A160JDQ5 (Ankyrin repeat domain-containing protein OS=Azospirillum humicireducens OX=1226968 GN=A6A40_02425 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 2.130e-7
Identity = 34/89 (38.20%), Postives = 52/89 (58.43%), Query Frame = 2 
Query: 3761 DIAGNTPLHHAIESENEERTMEIIEIMNQCGQHTNIRNEKGQTPMMIAVSRDASTKILRELLKTGSTLKENDNKGKTMLNYVMMSREAR 4027
            D AGNTPL  A ES N +    +IE++ + G   ++ N +G TP+M+A +R     ++  LLK G+ +  +D  G+T LN+   SR AR
Sbjct:   93 DKAGNTPLLAAAESGNPD----LIELLLKKGAKVDMENREGMTPLMVA-ARAGRADVVERLLKAGAKVDRSDFTGRTALNWAQESRNAR 176
[Close]
BLAST of BCL3-1 vs. TrEMBL
Match: G7Z3I1 (ANK_REP_REGION domain-containing protein OS=Azospirillum lipoferum (strain 4B) OX=862719 GN=AZOLI_0568 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.504e-7
Identity = 34/89 (38.20%), Postives = 52/89 (58.43%), Query Frame = 2 
Query: 3761 DIAGNTPLHHAIESENEERTMEIIEIMNQCGQHTNIRNEKGQTPMMIAVSRDASTKILRELLKTGSTLKENDNKGKTMLNYVMMSREAR 4027
            D AGNTPL  A ES N E    +I+++ + G   ++ N +G TP+M+A +R     ++  LLK G+ +  +D  G+T LN+   SR AR
Sbjct:   93 DKAGNTPLLAAAESGNPE----LIDLLLKKGAKVDMENREGMTPLMVA-ARAGRADVVERLLKAGAKVDRSDFTGRTALNWAQESRNAR 176
[Close]
BLAST of BCL3-1 vs. TrEMBL
Match: A0A5A9GAN1 (Ankyrin repeat domain-containing protein OS=Azospirillum oryzae OX=286727 GN=FZ938_04975 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 7.621e-7
Identity = 33/89 (37.08%), Postives = 53/89 (59.55%), Query Frame = 2 
Query: 3761 DIAGNTPLHHAIESENEERTMEIIEIMNQCGQHTNIRNEKGQTPMMIAVSRDASTKILRELLKTGSTLKENDNKGKTMLNYVMMSREAR 4027
            D AGNTPL  A E+ N E    +I+++ + G   ++ N +G TP+M+A +R+    ++  LLK G+ +  +D  G+T LN+   SR AR
Sbjct:   93 DKAGNTPLLAAAENGNPE----LIDLLLKKGAKVDMENREGMTPLMVA-ARNGRADVVDRLLKAGAQVDRSDFTGRTALNWAQDSRNAR 176
[Close]
BLAST of BCL3-1 vs. TrEMBL
Match: A0A1X7GH52 (Ankyrin repeat-containing protein OS=Azospirillum oryzae OX=286727 GN=SAMN02982917_3811 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 7.917e-7
Identity = 33/89 (37.08%), Postives = 52/89 (58.43%), Query Frame = 2 
Query: 3761 DIAGNTPLHHAIESENEERTMEIIEIMNQCGQHTNIRNEKGQTPMMIAVSRDASTKILRELLKTGSTLKENDNKGKTMLNYVMMSREAR 4027
            D AGNTPL  A E+ N E    +I+++ + G   ++ N +G TP+M+A +R     ++  LLK G+ +  +D  G+T LN+   SR AR
Sbjct:   93 DKAGNTPLLAAAENGNPE----LIDLLLKKGAKVDMENREGMTPLMVA-ARSGRADVVERLLKAGAQVDRSDFTGRTALNWAQDSRNAR 176
[Close]
BLAST of BCL3-1 vs. Planmine SMEST
Match: SMESG000025524.1 (SMESG000025524.1)

HSP 1 Score: 345.51 bits (885), Expect = 5.830e-160
Identity = 172/202 (85.15%), Postives = 181/202 (89.60%), Query Frame = 2 
Query: 3500 KSKY*SNQAKQEREYNEIYNDRMNYRKQMEAIIKIAKEIMPKWTRNKNITEILEGVTKMITNYAKG*KSTAEISILKKRMPILFTIIDIAGNTPLHHAIESENEERTMEIIEIMNQCGQHTNIRNEKGQTPMMIAVSRDASTKILRELLKTGSTLKENDNKGKTMLNYVMMSREAREIDLVTINGIKENIEVIGKI*TQFLE 4105
            KSKY +NQAKQEREYNEIYNDRMNYRKQMEAIIKI KEIMPKWT NKNITEILEGVTKMITNYAKG KSTAEISIL+ RMP LFT+IDIAGN   HHAIESENEERTMEIIEIMNQCGQHTNIRNEKGQTPMMIAVSRD  TKILRELLKTGSTL E DNKGKTMLNY+MMSREAR ID VTIN I+++IE+IG+     LE
Sbjct:  386 KSKYYNNQAKQEREYNEIYNDRMNYRKQMEAIIKITKEIMPKWTGNKNITEILEGVTKMITNYAKGSKSTAEISILRNRMPTLFTMIDIAGNKLPHHAIESENEERTMEIIEIMNQCGQHTNIRNEKGQTPMMIAVSRDTPTKILRELLKTGSTLNEKDNKGKTMLNYIMMSREARAIDFVTINAIQDDIEIIGQNLNPILE 587

HSP 2 Score: 166.392 bits (420), Expect = 5.830e-160
Identity = 85/105 (80.95%), Postives = 88/105 (83.81%), Query Frame = 1 
Query: 4081 KNLNPILGAIGRGYDEAAAKLIKWRKRKSDNEIIDVNKLESNENILVKRAMKSEYALPKTIKALLKR*EIKFTDNKREPERIVSRKEELETLVGEWHRIQGKPSG 4395
            +NLNPIL AI RGY+EAA KLIKWRKRKSDNEIIDVNK ESNENILVKRAMKSEYALPKTIKAL             EPERIVSRKEEL+TLVGEWHRIQGKPSG
Sbjct:  580 QNLNPILEAIERGYEEAAEKLIKWRKRKSDNEIIDVNKFESNENILVKRAMKSEYALPKTIKAL-------------EPERIVSRKEELDTLVGEWHRIQGKPSG 671

HSP 3 Score: 96.6709 bits (239), Expect = 5.830e-160
Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 1 
Query: 3331 SNRKSNEIKTNTRIKPANDTNVESSYEPGKDMTTGRQKNLLDMTKQIKGATNNQETKIK 3507
             N K +EI TNTRIKPANDT+V+SSYEPGKDMTTGRQKNLLDMTKQI GA N+QETK K
Sbjct:  330 CNWKPDEINTNTRIKPANDTSVKSSYEPGKDMTTGRQKNLLDMTKQINGAANSQETKSK 388

HSP 4 Score: 252.292 bits (643), Expect = 7.044e-89
Identity = 141/204 (69.12%), Postives = 157/204 (76.96%), Query Frame = 1 
Query: 1075 RLESLETEAEKYDKLTEKLTDKGNNVKSPELGIPIQLKTSTSKEMEKLREEMNQELPSKNTDKTEIFLRESTMYEIVRDEPEMRGREPISSSLKRNVQEMHSKRECNEEDLNDKKETGNSEIKTVGTKIAETWQTEIVLEEKILXXXXXXXXXXXXXXXLKD*VSEPMKVVMEITRQTKDIYSQTNQYIEKPSRIYDMPVKRIQ 1686
            RLESLETEAEKYDKLTEKLTDKGNNVKSPE  IPIQLKTST             +LPSKNTD+TEI+LRESTMYEI RDEPEMR +E I SSLKRNVQEMHS+R+CN EDLND+KETGN E KTV TKIAETW+TEI+ +                 TELKD VS+ +KV ME TRQTKD++ QTNQYI+KPSRI D+PVKRIQ
Sbjct:    5 RLESLETEAEKYDKLTEKLTDKGNNVKSPEPEIPIQLKTST-------------KLPSKNTDETEIYLRESTMYEITRDEPEMRKQESIHSSLKRNVQEMHSERKCNGEDLNDEKETGNLETKTVETKIAETWKTEIIRDR----------------TELKDQVSDLIKVSMETTRQTKDMHPQTNQYIKKPSRICDIPVKRIQ 179

HSP 5 Score: 97.0561 bits (240), Expect = 7.044e-89
Identity = 64/78 (82.05%), Postives = 67/78 (85.90%), Query Frame = 3 
Query: 1689 SRGKFIKCXXXXXXXXXXXXQICDIYSKEGCRTDRGYQLKNCQGYDRIVRTEREGMIKCFNRNQSGHTSKNCRMRRIQ 1922
            SRGKFI  NNYFRINNANYNQ+C+IYSKEGC+TDRGYQLKNCQG DR V TE E MI CFN NQS H SKNCRMRRIQ
Sbjct:  181 SRGKFINYNNYFRINNANYNQVCNIYSKEGCQTDRGYQLKNCQGCDRRVCTEGEEMIICFNCNQSSHMSKNCRMRRIQ 258

HSP 6 Score: 77.0258 bits (188), Expect = 7.317e-14
Identity = 41/54 (75.93%), Postives = 46/54 (85.19%), Query Frame = 2 
Query: 2855 QRGELIKKRIQRQQTRNLNTQYRSKTVSELIIETKEDVIEELSKITNVERKIAM 3016
            Q GELI+KRIQRQQ RNLN Q RSKTVSEL IETKEDVI+EL+  T+VERKI +
Sbjct:  276 QEGELIEKRIQRQQMRNLNMQDRSKTVSELKIETKEDVIDELNNTTHVERKITI 329
[Close]
BLAST of BCL3-1 vs. Planmine SMEST
Match: SMESG000009321.1 (SMESG000009321.1)

HSP 1 Score: 338.576 bits (867), Expect = 2.756e-126
Identity = 174/212 (82.08%), Postives = 185/212 (87.26%), Query Frame = 2 
Query: 3461 RNKLKEPQTTKRQKS----KY*SNQAKQEREYNEIYNDRMNYRKQMEAIIKIAKEIMPKWTRNKNITEILEGVTKMITNYAKG*KSTAEISILKKRMPILFTIIDIAGNTPLHHAIESENEERTMEIIEIMNQCGQHTNIRNEKGQTPMMIAVSRDASTKILRELLKTGSTLKENDNKGKTMLNYVMMSREAREIDLVTINGIKENIEVIGK 4084
            +N   +PQ TK+       K  +NQAKQEREYNEIYNDRMNYRKQMEAIIKI KEIMPKWTRNKNITEILEGVTKMI +YAKG KSTAEISILKK MPILFTIIDIAGNTPLHHAIESENEERTMEIIE MNQ GQHTNIRNEKGQTPM IAVSRDASTK LRELLKTGSTL E DNKGKTMLNY+MMSREA  I+ VTIN I+E+IE+IG+
Sbjct:  247 QNTTTKPQQTKKVYGQSIRKLTNNQAKQEREYNEIYNDRMNYRKQMEAIIKITKEIMPKWTRNKNITEILEGVTKMIKSYAKGSKSTAEISILKKIMPILFTIIDIAGNTPLHHAIESENEERTMEIIEAMNQGGQHTNIRNEKGQTPMNIAVSRDASTKTLRELLKTGSTLNEKDNKGKTMLNYIMMSREASAIEFVTINAIQEDIEIIGQ 458

HSP 2 Score: 135.576 bits (340), Expect = 2.756e-126
Identity = 66/81 (81.48%), Postives = 73/81 (90.12%), Query Frame = 1 
Query: 4081 KNLNPILGAIGRGYDEAAAKLIKWRKRKSDNEIIDVNKLESNENILVKRAMKSEYALPKTIKALLKR*EIKFTDNKREPER 4323
            +NL  ILG IGRGYD+AAAKLIKWRKRKSDN+IIDVNK ESNENIL+KRA+ SEYALP+TIKAL+KR EIKF DNKREP R
Sbjct:  458 QNLKTILGEIGRGYDKAAAKLIKWRKRKSDNKIIDVNKFESNENILLKRAINSEYALPRTIKALIKRGEIKFMDNKREPRR 538

HSP 3 Score: 158.688 bits (400), Expect = 1.911e-40
Identity = 126/156 (80.77%), Postives = 131/156 (83.97%), Query Frame = 3 
Query: 1689 SRGKFIKCXXXXXXXXXXXXQICDIYSKEGCRTDRGYQLKNCQGYDRIVRTER---------------EGMIKCFNRNQSGHTSKNCRMRRIQSXXXXXXXXXXXXXXXT*GVXXXXXXXXXXXXXXYESRTCYNCNLNGHIAANCPIERKSRQPK 2111
            +RGKFIKCNNYFRINNANYNQ+ DIYSKEGCRTDRGYQLKNCQGYDR VRTE                E MIKCFN +Q+GHTSKNCRMRRIQSQQKPNQFKKNPQNNPT  VRH RD+ IMRTTTRYESRTCYNCNLNGHIAANCPIERKSRQ K
Sbjct:    9 NRGKFIKCNNYFRINNANYNQVFDIYSKEGCRTDRGYQLKNCQGYDRRVRTESINRQPILMNSTRNVGEEMIKCFNCDQTGHTSKNCRMRRIQSQQKPNQFKKNPQNNPTQEVRHLRDMAIMRTTTRYESRTCYNCNLNGHIAANCPIERKSRQTK 164

HSP 4 Score: 77.7962 bits (190), Expect = 3.845e-16
Identity = 53/102 (51.96%), Postives = 66/102 (64.71%), Query Frame = 2 
Query: 2753 LESKSIQTTGDNIEIGVMSIKQEVIDILMVLLKFQRGELIKKRIQRQQTRNLNTQY--RSKTVSELIIETKEDVIEELSKITNVERKIAMQHEYAQQNTTRK 3052
            +E KS QT  +N    + S + + I+ L  ++     + I    QRQ+T    ++Y  + KTVSELIIETKEDV EELSK TNVERKI MQHEYAQQNTT K
Sbjct:  156 IERKSRQTKPNNYSQSIQSDQIQEIEQLGGMI-----QRISANNQRQRTTKDKSEYARQIKTVSELIIETKEDVREELSKTTNVERKITMQHEYAQQNTTTK 252

HSP 5 Score: 27.7202 bits (60), Expect = 3.845e-16
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 3 
Query: 3051 KPQRTKKVSGQSILKL 3098
            KPQ+TKKV GQSI KL
Sbjct:  252 KPQQTKKVYGQSIRKL 267

HSP 6 Score: 53.1434 bits (126), Expect = 1.526e-6
Identity = 29/52 (55.77%), Postives = 34/52 (65.38%), Query Frame = 2 
Query: 2063 TYSCKLSNR--------EKIETTKNDNYSQSTQSNQIQEIEQLGGMIKRISA 2194
             Y+C L+           K   TK +NYSQS QS+QIQEIEQLGGMI+RISA
Sbjct:  141 CYNCNLNGHIAANCPIERKSRQTKPNNYSQSIQSDQIQEIEQLGGMIQRISA 192
[Close]
BLAST of BCL3-1 vs. Planmine SMEST
Match: SMESG000028578.1 (SMESG000028578.1)

HSP 1 Score: 195.667 bits (496), Expect = 9.714e-126
Identity = 114/202 (56.44%), Postives = 121/202 (59.90%), Query Frame = 2 
Query: 3500 KSKY*SNQAKQEREYNEIYNDRMNYRKQMEAIIKIAKEIMPKWTRNKNITEILEGVTKMITNYAKG*KSTAEISILKKRMPILFTIIDIAGNTPLHHAIESENEERTMEIIEIMNQCGQHTNIRNEKGQTPMMIAVSRDASTKILRELLKTGSTLKENDNKGKTMLNYVMMSREAREIDLVTINGIKENIEVIGKI*TQFLE 4105
            KSKY SNQAKQEREYNEIYNDRMNYRKQMEAIIKI KEIMPKWTRNKNI EILEG                                  A N    H               I N+ GQ          TPMMIAVSRDASTKILRELLKTGSTL E DNKGKTMLNY+MMS E R ID VTINGI++ I++IG+     LE
Sbjct:  200 KSKYYSNQAKQEREYNEIYNDRMNYRKQMEAIIKITKEIMPKWTRNKNIAEILEG----------------------------------AMNQCGQHT-------------NIRNEKGQ----------TPMMIAVSRDASTKILRELLKTGSTLNEKDNKGKTMLNYIMMSLETRAIDFVTINGIQDYIQIIGQNLNPILE 344

HSP 2 Score: 166.007 bits (419), Expect = 9.714e-126
Identity = 85/105 (80.95%), Postives = 88/105 (83.81%), Query Frame = 1 
Query: 4081 KNLNPILGAIGRGYDEAAAKLIKWRKRKSDNEIIDVNKLESNENILVKRAMKSEYALPKTIKALLKR*EIKFTDNKREPERIVSRKEELETLVGEWHRIQGKPSG 4395
            +NLNPIL AI RGYDEAAAKLIKWRKRKSDNEIIDVNK ESNEN+LVKRAMKS+YALPKTIKAL             EPERIVSRKEELETLV EWHRIQGKPSG
Sbjct:  337 QNLNPILEAIERGYDEAAAKLIKWRKRKSDNEIIDVNKFESNENVLVKRAMKSKYALPKTIKAL-------------EPERIVSRKEELETLVVEWHRIQGKPSG 428

HSP 3 Score: 132.494 bits (332), Expect = 9.714e-126
Identity = 67/84 (79.76%), Postives = 71/84 (84.52%), Query Frame = 1 
Query: 3262 HMTGNCPN--KQTQNPSGTVGLMRGSNRKSNEIKTNTRIKPANDTNVESSYEPGKDMTTGRQKNLLDMTKQIKGATNNQETKIK 3507
            H T   P   K+TQNPSGTVGLMRGSNRK NEI TNTRIKPANDT+V+SSYEPGKDMTTGRQKNLLDM KQI GA N+QETK K
Sbjct:  119 HNTTTKPQRAKKTQNPSGTVGLMRGSNRKPNEINTNTRIKPANDTSVKSSYEPGKDMTTGRQKNLLDMKKQINGAANSQETKSK 202

HSP 4 Score: 182.57 bits (462), Expect = 2.041e-48
Identity = 101/120 (84.17%), Postives = 105/120 (87.50%), Query Frame = 2 
Query: 2696 NNNEKDKKEELQINVKSKVLESKSIQTTGDNIEIGVMSIKQEVIDILMVLLKFQRGELIKKRIQRQQTRNLNTQYRSKTVSELIIETKEDVIEELSKITNVERKIAMQHEYAQQNTTRKT 3055
            NNNEKDKKEELQINVKSKVLESKSIQTTGDNIEIGVMSI+QEVI+ILMV  K   GELI+KRIQRQQTRNLN Q RSKTVSEL IETKE+V EELSK TN ERKI MQHEYAQ NTT K 
Sbjct:    7 NNNEKDKKEELQINVKSKVLESKSIQTTGDNIEIGVMSIEQEVINILMVN-KISEGELIEKRIQRQQTRNLNMQDRSKTVSELKIETKENVREELSKTTNAERKITMQHEYAQHNTTTKP 125
[Close]
BLAST of BCL3-1 vs. Planmine SMEST
Match: SMESG000080953.1 (SMESG000080953.1)

HSP 1 Score: 387.111 bits (993), Expect = 1.732e-123
Identity = 234/316 (74.05%), Postives = 247/316 (78.16%), Query Frame = 1 
Query: 1075 RLESLETEAEKYDKLTEKLTDKGNNVKSPELGIPIQLKTSTSKEMEKLREEMNQELPSKNTDKTEIFLRESTMYEIVRDEPEMRGREPISSSLKRNVQEMHSKRECNEEDLNDKKETGNSEIKTVGTKIAETWQTEIVLEEKILXXXXXXXXXXXXXXXLKD*VSEPMKVVMEITRQTKDIYSQTNQYIEKPSRIYDMPVKRIQAVEVNL*SVIIISGLTTRTTIKYVIS--------IQKKDAELIEVIN*RIAKDMIE*FAQKEKE**NVLIVIKAVIRQRIVE*EEFKVNKNQTNSRKIHKITQHKGSDIEEI 1998
            RLESLETEAEKYDKLTEKLTDKGNNVKSPELGIPIQLKTSTSKEMEKLREE+NQELPSKNTDKTEIFLRESTMY+IVRDEPEM+GREPISSSLKRNVQEMHSKR+CNEEDLNDKKETGNSEIKTVGTKIAETWQTEIVLEEKILTTMEERVERENEQTELKD VSEPMKVVMEITRQTKDIY Q NQYIEKP RIYDMP  RI     N     I S    RT   Y +         ++ ++ E+I   N   + D                         RIVE EEFKVNKNQTNSR++HKITQHKGSDIEEI
Sbjct:    5 RLESLETEAEKYDKLTEKLTDKGNNVKSPELGIPIQLKTSTSKEMEKLREEINQELPSKNTDKTEIFLRESTMYKIVRDEPEMKGREPISSSLKRNVQEMHSKRKCNEEDLNDKKETGNSEIKTVGTKIAETWQTEIVLEEKILTTMEERVERENEQTELKDRVSEPMKVVMEITRQTKDIYPQPNQYIEKPLRIYDMPF-RINNENYNQ-ICDIYSKEGCRTDRGYQLKNCQGCDRRVRTEEEEMIICFNCNQSGDT-----------------------SRIVEGEEFKVNKNQTNSRRVHKITQHKGSDIEEI 295

HSP 2 Score: 85.1149 bits (209), Expect = 1.790e-17
Identity = 42/50 (84.00%), Postives = 43/50 (86.00%), Query Frame = 3 
Query: 1749 QICDIYSKEGCRTDRGYQLKNCQGYDRIVRTEREGMIKCFNRNQSGHTSK 1898
            QICDIYSKEGCRTDRGYQLKNCQG DR VRTE E MI CFN NQSG TS+
Sbjct:  213 QICDIYSKEGCRTDRGYQLKNCQGCDRRVRTEEEEMIICFNCNQSGDTSR 262
[Close]
BLAST of BCL3-1 vs. Planmine SMEST
Match: SMESG000034729.1 (SMESG000034729.1)

HSP 1 Score: 269.24 bits (687), Expect = 1.253e-119
Identity = 152/208 (73.08%), Postives = 175/208 (84.13%), Query Frame = 1 
Query: 1075 RLESLETEAEKYDKLTEKLTDKGNNVKSPELGIPIQLKTSTSKEMEKLREEMNQELPSKNTDKTEIFLRESTMYEIVRDEPEMRGREPISSSLKRNVQEMHSKRECNEEDLNDKKETGNSEIKTVGTKIAETWQTEIVLEEKILXX----XXXXXXXXXXXXXLKD*VSEPMKVVMEITRQTKDIYSQTNQYIEKPSRIYDMPVKRIQ 1686
            RLESLET+AE+YDKL EKLTDKGNNVKSPE  IPIQLKTSTSKEM+KLREEMNQEL  K TDKTEI+L++ TMYEI  DEPEM  +EPI SSLKRNVQEMHSKR+CN EDLND+KE GNSE KTV TKIAETW+TEI+  EKILTT    + ++ +   +QTELKD VS+ +KV +E TRQTKD++ QTNQYI+KPSRI D+PVKRIQ
Sbjct:    5 RLESLETKAEEYDKLIEKLTDKGNNVKSPEPEIPIQLKTSTSKEMKKLREEMNQELQRKITDKTEIYLKKLTMYEITHDEPEMWKQEPIYSSLKRNVQEMHSKRKCNGEDLNDEKEIGNSETKTVETKIAETWKTEIIRVEKILTTIEERVGKKKKERKDQTELKDRVSDLIKVSIETTRQTKDMHPQTNQYIKKPSRICDIPVKRIQ 212

HSP 2 Score: 145.591 bits (366), Expect = 1.253e-119
Identity = 113/141 (80.14%), Postives = 120/141 (85.11%), Query Frame = 3 
Query: 1689 SRGKFIKCXXXXXXXXXXXXQICDIYSKEGCRTDRGYQLKNCQGYDRIVRTEREGMIKCFNRNQSGHTSKNCRMRRIQSXXXXXXXXXXXXXXXT*GVXXXXXXXXXXXXXXYESRTCYNCNLNGHIAANCPIERKSRQPK 2111
            SRGKFI  NNYFRINNANY Q+C+IYSKEGCRTDRGYQLKNCQG DR VRTE E MI  FN NQS H SKNCRMRRIQ QQKPNQFKK+PQNNPT  VRH RD+ IM TTTR+E  TC+NCNLNGH+A NCPIERKSRQPK
Sbjct:  214 SRGKFINYNNYFRINNANYYQVCNIYSKEGCRTDRGYQLKNCQGCDRRVRTEGEEMIIYFNCNQSSHMSKNCRMRRIQGQQKPNQFKKSPQNNPTQEVRHLRDMAIMSTTTRFEITTCFNCNLNGHLAENCPIERKSRQPK 354

HSP 3 Score: 58.9214 bits (141), Expect = 1.253e-119
Identity = 43/47 (91.49%), Postives = 46/47 (97.87%), Query Frame = 2 
Query: 2108 KNDNYSQSTQSNQIQEIEQLGGMIKRISAXXXXXXXXXXXXXXDVRY 2248
            K +NYSQSTQSNQIQEIEQLGGMI+RISANNQR+RSNTRRNRNDVRY
Sbjct:  354 KPNNYSQSTQSNQIQEIEQLGGMIQRISANNQRKRSNTRRNRNDVRY 400
The following BLAST results are available for this feature:
BLAST of BCL3-1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BCL3-1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BCL3-1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BCL3-1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BCL3-1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BCL3-1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BCL3-1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BCL3-1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
T1E1171.231e-727.57BCL3-1 OS=Dendrocoelum lacteum OX=27895 PE=2 SV=1[more]
A0A160JDQ52.130e-738.20Ankyrin repeat domain-containing protein OS=Azospi... [more]
G7Z3I12.504e-738.20ANK_REP_REGION domain-containing protein OS=Azospi... [more]
A0A5A9GAN17.621e-737.08Ankyrin repeat domain-containing protein OS=Azospi... [more]
A0A1X7GH527.917e-737.08Ankyrin repeat-containing protein OS=Azospirillum ... [more]
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BLAST of BCL3-1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BCL3-1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BCL3-1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BCL3-1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BCL3-1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BCL3-1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000025524.15.830e-16085.15SMESG000025524.1[more]
SMESG000009321.12.756e-12682.08SMESG000009321.1[more]
SMESG000028578.19.714e-12656.44SMESG000028578.1[more]
SMESG000080953.11.732e-12374.05SMESG000080953.1[more]
SMESG000034729.11.253e-11973.08SMESG000034729.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30019886 ID=SMED30019886|Name=BCL3-1|organism=Schmidtea mediterranea sexual|type=transcript|length=4395bp
AGATGAGATATGATTATGATTAGATATTAAAGGCCATAGAGTGCCAGTTG
AAATGAGATTAGAGATTGAAGGCCACAGAATGCCAGTTGAAATAAGATGA
CGAAGGCCGGAGAGCCAACGGAAACAATAGAGGGTATAGAGCGCCAGCGA
CTGAGGATTAAGTAAACGATTTTTAATCAATGAGACATAGGAAAAATGAT
TTACAGATTGAATGAGAGTATGAGTATAATGATTTTATTATTGTAATATA
GATAATTAATGCGACCACATAGATAATTGATAAGACTATATAGATAATTG
ATACGAGGTCGATAGATAATTGTTACGAGATATAGATAATTCAAAATAGA
CTTAAAAATGAAGGGAGATGAAGCAAAAGAAAAATTATTACAGCGAATAA
AGCTTACGGAAAAAGACAAGAGAATTTAAATAAAAGGCCCATAGAACAAC
AGCGGTTAAAGTTTAAGGAAAAAGACGAGAAGAGTTAAGTAAAAAGGCCA
TAGCGCATAGAGATTAAGGAATTTTATTTTTGGATAAACGATAAAGGGAT
AAAGGAGAATAGTTAACGAGACGATTATTGATATTATGGTGATGATTTAT
CTGATTAAAATAGTTAATTGATACGACCGGGTAGATAATTAATGCGACTA
TAAGGATAATTTAGACGAAACAAATAGATAATTGATACGAGCTATAGATA
ATTTAAAATAAAATTAAAATGAAAAAACAAAAATTAAAAAGATAAGAAGT
TGACGTAGAGAAAAGAATTAAGGAAAAGCAGTGAGAGTAGTACGATAAAT
TAATGCGGAAATTTATATACTAGAAGTGTTACTTATGTTTAGATAATTGA
CAAAGAATAAAGAGATCGAGTAAACCAAAAGAATAAAGAGATCAAGTAAA
CGACAAATAATAGAGCCGATGAACTAGAGATAGAATCAAGAAAACGAGTT
ACGAGAAACCGGAATCAAGGAAACCATTGTGTAGAGAAACTGAAAATATA
CCAAAACAAACGGAGAACAAGGATAAAGAAATAGACCATGTTACTGAGAT
TCAAAGAGAGGGAAAAGCGGCAACAGATTAGAAAGTTTGGAAACAGAAGC
CGAAAAATATGATAAATTAACGGAAAAGCTAACCGATAAAGGAAACAACG
TGAAATCACCCGAGCTAGGAATTCCAATTCAGTTGAAAACAAGTACGAGT
AAAGAGATGGAAAAACTCCGAGAGGAAATGAACCAAGAGTTGCCAAGTAA
AAACACGGATAAAACAGAAATATTTTTGAGAGAATCAACAATGTACGAAA
TCGTACGCGATGAACCGGAAATGAGGGGCCGAGAACCAATATCTTCAAGT
TTAAAGAGGAATGTACAGGAGATGCATTCAAAAAGAGAATGCAACGAAGA
AGATTTAAATGACAAAAAAGAAACTGGAAATTCGGAAATAAAAACAGTTG
GAACAAAAATAGCTGAAACATGGCAAACGGAAATCGTACTGGAAGAGAAA
ATATTAACTACAATGGAAGAAAGAGTCGAAAGAGAAAATGAGCAAACCGA
GTTAAAAGATTGAGTATCAGAACCAATGAAAGTAGTGATGGAAATAACGA
GACAAACGAAAGATATTTACTCGCAAACAAATCAATATATTGAAAAACCA
TCACGAATTTACGATATGCCAGTTAAGAGGATTCAAGCAGTAGAGGTAAA
TTTATAAAGTGTAATAATTATTTCAGGATTAACAACGCGAACTACAATCA
AATATGTGATATCTATTCAAAAGAAGGATGCAGAACTGATCGAGGTTATC
AACTAAAGAATTGCCAAGGATATGATAGAATAGTTCGCACAGAAAGAGAA
GGAATGATAAAATGTTTTAATCGTAATCAAAGCGGTCATACGTCAAAGAA
TTGTCGAATGAGAAGAATTCAAAGTCAACAAAAACCAAACCAATTCAAGA
AAAATCCACAAAATAACCCAACATAAGGGGTCAGACATTGAAGAGATATA
ACGATAATGAGGACAACCACAAGATACGAGAGTAGAACCTGTTATAACTG
CAACCTAAACGGACATATAGCTGCAAATTGTCCAATAGAGAGAAAATCGA
GACAACCAAAAACGACAATTATAGTCAAAGTACACAAAGTAATCAAATAC
AAGAGATTGAGCAATTAGGAGGTATGATTAAACGAATATCCGCAAACAAT
CAAAGACAACGAAGTAATACGAGGAGAAACAGGAATGATGTTCGATATTT
ATGGACCGGAAAATATTCGGAACAGCAAAAAATCGAATGGCAGAGATTAC
AGAGAGAGGAAATCCAAGAAATTCGATAAAGACGGATGAACAGAGTAGAA
GCAATATGTCGAAAATAGTCAATACAAAAGAAATCCACACTGCGGAGCAG
TGTGTCGTCAACAGCGAGGAGGATATAACAATAAATAACGAAAATAACGA
CAAAGAAAATAAAGTGACTAAGAAAGACGAAACTCAAGAGGTCAAAATAA
AATCAGAGCAAGAATCGAGCAGCGAAGAAAAATAAAGATAATTCAAGAGT
TCACCGAACGATAGACGACGAAAAATCAAAAAAAAAAAAACAGCGATAAA
AGATATCGAAAATATCGAAATACGAGGGTACTACTACAAAAATCGAAAAG
AGAATCGATAAGGAAAGCGAAAATAAACATGTTACAACAAGGACTAACAA
TAATGAAAAGGACAAGAAAGAGGAACTTCAAATAAACGTGAAAAGTAAAG
TATTGGAGTCAAAATCTATACAAACAACAGGAGACAATATAGAAATAGGA
GTGATGTCAATCAAACAAGAGGTAATAGATATTTTAATGGTTTTATTAAA
ATTTCAGAGGGGTGAACTAATCAAAAAGAGAATCCAAAGACAACAAACGA
GAAATCTGAATACGCAATACAGATCAAAAACAGTCAGTGAATTGATAATT
GAGACCAAAGAAGATGTAATAGAAGAACTCAGCAAAATAACGAATGTGGA
AAGGAAAATTGCAATGCAGCACGAATATGCACAACAAAACACGACTAGGA
AAACCACAACGAACGAAGAAAGTATCTGGACAATCGATACTAAAGCTAAT
GAAGTAAAGATCAGAGAATATTGTAAAACATGTCAAAAATCGGGACACAC
AGAGAACGACTACTATCGACATCAAATAAGCCAACTATTCGGGAAGAGAG
GACACGTAAATAGATTTTGTAACAAAAGTCGCGGAACATGTTTTAACTGT
CTAAAATGGGACATATGACTGGGAATTGTCCAAATAAACAGACTCAGAAC
CCATCCGGAACAGTGGGACTAATGAGAGGAAGCAATAGGAAATCAAATGA
GATCAAGACCAACACCAGAATAAAGCCAGCGAATGATACAAATGTCGAAT
CAAGTTACGAACCAGGAAAAGACATGACAACTGGAAGGCAGAAAAACCTA
TTAGACATGACGAAACAAATTAAAGGAGCCACAAACAACCAAGAGACAAA
AATCAAAATATTAAAGTAATCAGGCGAAACAGGAACGAGAATATAACGAA
ATCTACAATGATAGAATGAATTACCGGAAACAGATGGAAGCAATCATCAA
AATAGCTAAGGAAATAATGCCGAAATGGACTAGAAACAAGAATATCACCG
AGATATTAGAAGGAGTAACAAAGATGATCACGAACTACGCGAAAGGCTAA
AAATCAACAGCAGAAATCAGCATCTTAAAGAAAAGAATGCCAATATTATT
CACAATAATCGACATAGCGGGTAATACACCACTACACCATGCCATAGAAA
GCGAAAACGAAGAACGAACGATGGAAATTATCGAGATAATGAACCAATGT
GGACAACATACAAATATCAGAAATGAGAAAGGACAAACACCCATGATGAT
TGCAGTGTCAAGAGATGCGTCAACGAAAATTCTGAGGGAGTTATTAAAAA
CAGGATCAACTCTAAAGGAGAATGACAATAAAGGAAAAACGATGTTAAAT
TACGTTATGATGTCGCGAGAAGCAAGAGAAATAGATTTAGTTACGATAAA
TGGAATTAAAGAAAACATCGAAGTAATAGGAAAAATTTAAACCCAATTCT
TGGAGCAATCGGGAGAGGATACGATGAAGCAGCAGCAAAATTGATCAAGT
GGAGAAAAAGAAAATCTGATAACGAAATCATAGACGTAAACAAATTAGAA
AGCAATGAAAATATATTAGTAAAAAGAGCAATGAAATCCGAATATGCATT
ACCAAAGACGATAAAAGCCCTGTTAAAGAGATGAGAAATAAAATTCACGG
ACAATAAAAGAGAGCCTGAGAGAATAGTGTCCAGAAAAGAAGAATTAGAA
ACATTGGTAGGAGAATGGCACCGAATACAAGGAAAACCTAGCGGT
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protein sequence of SMED30019886-orf-1

>SMED30019886-orf-1 ID=SMED30019886-orf-1|Name=SMED30019886-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=155bp
MSIKQEVIDILMVLLKFQRGELIKKRIQRQQTRNLNTQYRSKTVSELIIE
TKEDVIEELSKITNVERKIAMQHEYAQQNTTRKTTTNEESIWTIDTKANE
VKIREYCKTCQKSGHTENDYYRHQISQLFGKRGHVNRFCNKSRGTCFNCL
KWDI*
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protein sequence of SMED30019886-orf-2

>SMED30019886-orf-2 ID=SMED30019886-orf-2|Name=SMED30019886-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=118bp
MPILFTIIDIAGNTPLHHAIESENEERTMEIIEIMNQCGQHTNIRNEKGQ
TPMMIAVSRDASTKILRELLKTGSTLKENDNKGKTMLNYVMMSREAREID
LVTINGIKENIEVIGKI*
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protein sequence of SMED30019886-orf-3

>SMED30019886-orf-3 ID=SMED30019886-orf-3|Name=SMED30019886-orf-3|organism=Schmidtea mediterranea sexual|type=polypeptide|length=119bp
MEKLREEMNQELPSKNTDKTEIFLRESTMYEIVRDEPEMRGREPISSSLK
RNVQEMHSKRECNEEDLNDKKETGNSEIKTVGTKIAETWQTEIVLEEKIL
TTMEERVERENEQTELKD*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
PLANA:0000101muscle cell
PLANA:0002032epidermal cell
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: molecular function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO:0005515protein binding
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: biological process
TermDefinition
GO:0006355regulation of transcription, DNA-templated