Four and a half LIM domains 5

Overview
NameFour and a half LIM domains 5
Smed IDSMED30019884
Length (bp)638
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Four and a half LIM domains 5 (SMED30019884) t-SNE clustered cells

Violin plots show distribution of expression levels for Four and a half LIM domains 5 (SMED30019884) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Four and a half LIM domains 5 (SMED30019884) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Four and a half LIM domains 5 (SMED30019884) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30019884

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 7

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
cephalic gangliaSMED30019884SMESG000036525.1 dd_Smed_v4_3385_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
anterior sideSMED30019884SMESG000036525.1 dd_Smed_v4_3385_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30019884SMESG000036525.1 dd_Smed_v4_3385_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30019884SMESG000036525.1 Contig26941newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30019884SMESG000036525.1 Contig26941uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30019884SMESG000036525.1 Contig35191newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30019884SMESG000036525.1 Contig35191uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Human
Match: LDB3 (LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710])

HSP 1 Score: 94.3597 bits (233), Expect = 6.882e-22
Identity = 39/114 (34.21%), Postives = 61/114 (53.51%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+KC   I  G  + A ++TWH  CF C  CKK   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L  + F+ K  + +C+ HA
Sbjct:  615 CAKCNTKI-MGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDRPLCKKHA 727

HSP 2 Score: 72.0182 bits (175), Expect = 3.801e-14
Identity = 32/114 (28.07%), Postives = 52/114 (45.61%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C  C  +I  GP + A  ++WH E F C +CK  + +  F ++ +  +C+ C+   +   C  C   I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:  553 TPLCGHCNNVIR-GPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPLCAKCNTKIM--GEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCE 663
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Human
Match: LDB3 (LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710])

HSP 1 Score: 94.3597 bits (233), Expect = 6.882e-22
Identity = 39/114 (34.21%), Postives = 61/114 (53.51%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+KC   I  G  + A ++TWH  CF C  CKK   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L  + F+ K  + +C+ HA
Sbjct:  615 CAKCNTKI-MGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDRPLCKKHA 727

HSP 2 Score: 72.0182 bits (175), Expect = 3.801e-14
Identity = 32/114 (28.07%), Postives = 52/114 (45.61%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C  C  +I  GP + A  ++WH E F C +CK  + +  F ++ +  +C+ C+   +   C  C   I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:  553 TPLCGHCNNVIR-GPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPLCAKCNTKIM--GEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCE 663
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Human
Match: LDB3 (LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710])

HSP 1 Score: 93.5893 bits (231), Expect = 1.423e-21
Identity = 39/114 (34.21%), Postives = 61/114 (53.51%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+KC   I  G  + A ++TWH  CF C  CKK   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L  + F+ K  + +C+ HA
Sbjct:  610 CAKCNTKI-MGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDRPLCKKHA 722

HSP 2 Score: 71.2478 bits (173), Expect = 6.458e-14
Identity = 32/114 (28.07%), Postives = 52/114 (45.61%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C  C  +I  GP + A  ++WH E F C +CK  + +  F ++ +  +C+ C+   +   C  C   I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:  548 TPLCGHCNNVIR-GPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPLCAKCNTKIM--GEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCE 658
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Human
Match: PDLIM5 (PDZ and LIM domain 5 [Source:HGNC Symbol;Acc:HGNC:17468])

HSP 1 Score: 81.6481 bits (200), Expect = 3.900e-18
Identity = 42/114 (36.84%), Postives = 58/114 (50.88%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C +C + I  G  I A K+TWH  CF C  C K I N  FH ++ EP+C+  +  L+   C  C   I     F      ++H  CF+C+VC  SL  + FF K  K +C+ HA
Sbjct:  154 CGRCQRKI-LGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHA 266

HSP 2 Score: 67.0106 bits (162), Expect = 7.313e-13
Identity = 33/115 (28.70%), Postives = 58/115 (50.43%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCEN 526
            T  C+ C ++I  GP + A  K+WH E F C HCK  +    F ++    +C+ C+   +  +C  C++ I    E  +  ++++H  CF+C  C   + N  F ++D +  CE 
Sbjct:   92 TPMCAHCNQVIR-GPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECGRCQRKIL--GEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCET 203
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Human
Match: LDB3 (LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710])

HSP 1 Score: 82.0333 bits (201), Expect = 1.423e-17
Identity = 39/114 (34.21%), Postives = 61/114 (53.51%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+KC   I  G  + A ++TWH  CF C  CKK   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L  + F+ K  + +C+ HA
Sbjct:  500 CAKCNTKIM-GEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDRPLCKKHA 612

HSP 2 Score: 58.9214 bits (141), Expect = 1.180e-9
Identity = 32/114 (28.07%), Postives = 52/114 (45.61%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C  C  +I  GP + A  ++WH E F C +CK  + +  F ++ +  +C+ C+   +   C  C   I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:  438 TPLCGHCNNVIR-GPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPLCAKCNTKIM--GEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCE 548
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Celegans
Match: alp-1 (ALP/Enigma encoding [Source:UniProtKB/TrEMBL;Acc:G5EFG1])

HSP 1 Score: 95.9005 bits (237), Expect = 1.013e-22
Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 2 
Query:  176 NMTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            ++  RC+KC K I S   + A +K WH  CF C HC+K   N +F+ +   P+C++ WN L+  KC SCR  I     +      ++H  CF C  C+ +L  + FF K+ +  C  HA
Sbjct: 1307 HIAPRCNKCSKPIISD-CLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQGLPYCEQDWNALFTTKCVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAKNGQPFCRLHA 1424

HSP 2 Score: 56.6102 bits (135), Expect = 2.883e-9
Identity = 29/113 (25.66%), Postives = 51/113 (45.13%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQC--NHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            C  C + I  G  + A  K+W  E F C  + C++R+    F +++ + FC+ C+      +C  C + I   ++     +K +H  CF C  C     N  F+++     CE
Sbjct: 1251 CESCKQQIR-GAFVLATGKSWCPEHFVCANSSCRRRLLECGFVEEDGQKFCESCFEQHIAPRCNKCSKPII--SDCLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQGLPYCE 1360
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Celegans
Match: alp-1 (ALP/Enigma encoding [Source:UniProtKB/TrEMBL;Acc:G5EFG1])

HSP 1 Score: 91.6633 bits (226), Expect = 2.667e-21
Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 2 
Query:  176 NMTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            ++  RC+KC K I S   + A +K WH  CF C HC+K   N +F+ +   P+C++ WN L+  KC SCR  I     +      ++H  CF C  C+ +L  + FF K+ +  C  HA
Sbjct:  567 HIAPRCNKCSKPIISD-CLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQGLPYCEQDWNALFTTKCVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAKNGQPFCRLHA 684

HSP 2 Score: 53.5286 bits (127), Expect = 2.617e-8
Identity = 29/113 (25.66%), Postives = 51/113 (45.13%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQC--NHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            C  C + I  G  + A  K+W  E F C  + C++R+    F +++ + FC+ C+      +C  C + I   ++     +K +H  CF C  C     N  F+++     CE
Sbjct:  511 CESCKQQIR-GAFVLATGKSWCPEHFVCANSSCRRRLLECGFVEEDGQKFCESCFEQHIAPRCNKCSKPII--SDCLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQGLPYCE 620
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Celegans
Match: alp-1 (ALP/Enigma encoding [Source:UniProtKB/TrEMBL;Acc:G5EFG1])

HSP 1 Score: 91.6633 bits (226), Expect = 2.829e-21
Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 2 
Query:  176 NMTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            ++  RC+KC K I S   + A +K WH  CF C HC+K   N +F+ +   P+C++ WN L+  KC SCR  I     +      ++H  CF C  C+ +L  + FF K+ +  C  HA
Sbjct:  528 HIAPRCNKCSKPIISD-CLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQGLPYCEQDWNALFTTKCVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAKNGQPFCRLHA 645

HSP 2 Score: 53.5286 bits (127), Expect = 2.630e-8
Identity = 29/113 (25.66%), Postives = 51/113 (45.13%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQC--NHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            C  C + I  G  + A  K+W  E F C  + C++R+    F +++ + FC+ C+      +C  C + I   ++     +K +H  CF C  C     N  F+++     CE
Sbjct:  472 CESCKQQIR-GAFVLATGKSWCPEHFVCANSSCRRRLLECGFVEEDGQKFCESCFEQHIAPRCNKCSKPII--SDCLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQGLPYCE 581
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Celegans
Match: alp-1 (ALP/Enigma encoding [Source:UniProtKB/TrEMBL;Acc:G5EFG1])

HSP 1 Score: 85.5001 bits (210), Expect = 4.008e-19
Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = 2 
Query:  179 MTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            +  RC+KC K I S   + A +K WH  CF C HC+K   N +F+ +   P+C++ WN L+  KC SCR  I     +      ++H  CF C  C+ +L  + FF K+ +  C  HA
Sbjct:  655 IAPRCNKCSKPIISD-CLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQGLPYCEQDWNALFTTKCVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAKNGQPFCRLHA 771
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Celegans
Match: lim-9 (LIM domain family [Source:UniProtKB/TrEMBL;Acc:G5EDJ5])

HSP 1 Score: 79.7221 bits (195), Expect = 1.273e-18
Identity = 39/118 (33.05%), Postives = 64/118 (54.24%), Query Frame = 2 
Query:  188 RCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIA--ENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHAK 535
            RCSKC K+I +G  +    + WH+ECF C +C   +    F  K+++P+C  C+  L+ K+C +C + I      +F +  ++ +H  CF+C  C TSL  K F     +++C   AK
Sbjct:   50 RCSKCKKVITAG-GVTYKNEPWHRECFCCTNCNSSLAGQRFTSKDEKPYCANCYGDLFAKRCNACTKPITGIGGAKFISFEDRHWHNDCFICAQCTTSLVGKGFITDGHEILCPECAK 166

HSP 2 Score: 70.4774 bits (171), Expect = 4.025e-15
Identity = 37/99 (37.37%), Postives = 53/99 (53.54%), Query Frame = 2 
Query:  230 IEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCEN 526
            +E   K WH +CF C HCK  I   SF  KND+ FC  C+   +  +C  C++ I       T   + +H++CF C  C++SLA ++F  KD K  C N
Sbjct:    4 MEYKGKQWHDKCFCCAHCKLAIGTKSFIPKNDDVFCGPCYEEKFATRCSKCKKVITAGG--VTYKNEPWHRECFCCTNCNSSLAGQRFTSKDEKPYCAN 100
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Fly
Match: Lmpt (gene:FBgn0261565 transcript:FBtr0302777)

HSP 1 Score: 83.1889 bits (204), Expect = 3.320e-19
Identity = 39/118 (33.05%), Postives = 63/118 (53.39%), Query Frame = 2 
Query:  188 RCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIA--ENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHAK 535
            RC KC K+I SG  +    + WH+ECF C HC   +    F  ++++P+C EC+  L+ K+C +C + I     T F +  ++ +H  CF+C  C  SL  + F      ++C + AK
Sbjct:  125 RCIKCNKVITSG-GVTYKNEPWHRECFTCTHCNITLAGQRFTSRDEKPYCAECFGELFAKRCTACVKPITGIGGTRFISFEDRHWHHDCFVCASCKASLVGRGFITDGPDILCPDCAK 241

HSP 2 Score: 56.225 bits (134), Expect = 2.364e-9
Identity = 29/97 (29.90%), Postives = 47/97 (48.45%), Query Frame = 2 
Query:  230 IEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVC 520
            +E   + WH+ CF C  CK  I   SF  +  E +C  C+   +  +C  C + I       T   + +H++CF C  C+ +LA ++F  +D K  C
Sbjct:   79 MEYKTRQWHENCFCCCVCKTAIGTKSFIPREQEIYCAGCYEEKFATRCIKCNKVITSGG--VTYKNEPWHRECFTCTHCNITLAGQRFTSRDEKPYC 173
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Fly
Match: Lmpt (gene:FBgn0261565 transcript:FBtr0302776)

HSP 1 Score: 83.1889 bits (204), Expect = 3.320e-19
Identity = 39/118 (33.05%), Postives = 63/118 (53.39%), Query Frame = 2 
Query:  188 RCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIA--ENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHAK 535
            RC KC K+I SG  +    + WH+ECF C HC   +    F  ++++P+C EC+  L+ K+C +C + I     T F +  ++ +H  CF+C  C  SL  + F      ++C + AK
Sbjct:  125 RCIKCNKVITSG-GVTYKNEPWHRECFTCTHCNITLAGQRFTSRDEKPYCAECFGELFAKRCTACVKPITGIGGTRFISFEDRHWHHDCFVCASCKASLVGRGFITDGPDILCPDCAK 241

HSP 2 Score: 56.225 bits (134), Expect = 2.364e-9
Identity = 29/97 (29.90%), Postives = 47/97 (48.45%), Query Frame = 2 
Query:  230 IEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVC 520
            +E   + WH+ CF C  CK  I   SF  +  E +C  C+   +  +C  C + I       T   + +H++CF C  C+ +LA ++F  +D K  C
Sbjct:   79 MEYKTRQWHENCFCCCVCKTAIGTKSFIPREQEIYCAGCYEEKFATRCIKCNKVITSGG--VTYKNEPWHRECFTCTHCNITLAGQRFTSRDEKPYC 173
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Fly
Match: Lmpt (gene:FBgn0261565 transcript:FBtr0302784)

HSP 1 Score: 83.1889 bits (204), Expect = 3.320e-19
Identity = 39/118 (33.05%), Postives = 63/118 (53.39%), Query Frame = 2 
Query:  188 RCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIA--ENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHAK 535
            RC KC K+I SG  +    + WH+ECF C HC   +    F  ++++P+C EC+  L+ K+C +C + I     T F +  ++ +H  CF+C  C  SL  + F      ++C + AK
Sbjct:  125 RCIKCNKVITSG-GVTYKNEPWHRECFTCTHCNITLAGQRFTSRDEKPYCAECFGELFAKRCTACVKPITGIGGTRFISFEDRHWHHDCFVCASCKASLVGRGFITDGPDILCPDCAK 241

HSP 2 Score: 56.225 bits (134), Expect = 2.364e-9
Identity = 29/97 (29.90%), Postives = 47/97 (48.45%), Query Frame = 2 
Query:  230 IEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVC 520
            +E   + WH+ CF C  CK  I   SF  +  E +C  C+   +  +C  C + I       T   + +H++CF C  C+ +LA ++F  +D K  C
Sbjct:   79 MEYKTRQWHENCFCCCVCKTAIGTKSFIPREQEIYCAGCYEEKFATRCIKCNKVITSGG--VTYKNEPWHRECFTCTHCNITLAGQRFTSRDEKPYC 173
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Fly
Match: Zasp52 (gene:FBgn0265991 transcript:FBtr0100388)

HSP 1 Score: 85.8853 bits (211), Expect = 4.254e-19
Identity = 38/115 (33.04%), Postives = 57/115 (49.57%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHAK 535
            CSKC   I+ G  + A  K +H ECF C  C K   N  F  ++   +C+  WN L+  KCF+C   +     +      +YH +CF C  C  +L  + F+ K  +  C+NHA+
Sbjct: 2081 CSKCAGKIK-GDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHAR 2194

HSP 2 Score: 55.4546 bits (132), Expect = 9.210e-9
Identity = 36/132 (27.27%), Postives = 56/132 (42.42%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQC--NHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHAK*NIKF*DEPNFACSF 580
            C+ C   I  GP I A  + W  + F C   +C++ + +  F ++  + +C+ C+       C  C   I  +        K +H +CF C  C     N+ FF++D    CE  A  N  F     FAC F
Sbjct: 2020 CNSCNVQIR-GPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDC--LNAIGKHFHPECFTCGQCGKIFGNRPFFLEDGNAYCE--ADWNELF-TTKCFACGF 2145
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Fly
Match: Zasp52 (gene:FBgn0265991 transcript:FBtr0392901)

HSP 1 Score: 85.5001 bits (210), Expect = 4.371e-19
Identity = 38/115 (33.04%), Postives = 57/115 (49.57%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHAK 535
            CSKC   I+ G  + A  K +H ECF C  C K   N  F  ++   +C+  WN L+  KCF+C   +     +      +YH +CF C  C  +L  + F+ K  +  C+NHA+
Sbjct: 2029 CSKCAGKIK-GDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHAR 2142

HSP 2 Score: 55.4546 bits (132), Expect = 9.283e-9
Identity = 36/132 (27.27%), Postives = 56/132 (42.42%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQC--NHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHAK*NIKF*DEPNFACSF 580
            C+ C   I  GP I A  + W  + F C   +C++ + +  F ++  + +C+ C+       C  C   I  +        K +H +CF C  C     N+ FF++D    CE  A  N  F     FAC F
Sbjct: 1968 CNSCNVQIR-GPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDC--LNAIGKHFHPECFTCGQCGKIFGNRPFFLEDGNAYCE--ADWNELF-TTKCFACGF 2093
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Zebrafish
Match: pdlim5a (PDZ and LIM domain 5a [Source:NCBI gene;Acc:436927])

HSP 1 Score: 85.5001 bits (210), Expect = 4.922e-19
Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            CS+C+  I  G  I A K+TWH  CF C  C++ I N +FH ++ EP+C+  + +L+   C  C   I    +F      ++H  CF+C VC  SL  + FF K  K +C+ HA
Sbjct:  434 CSRCHHKI-LGEVINALKQTWHVYCFLCASCQQPIRNDTFHLEDGEPYCERDFYSLFGTGCRGCDFPIEAGDKFLEALGGTWHDTCFVCTVCSVSLEGQTFFSKKGKPLCKKHA 546

HSP 2 Score: 61.6178 bits (148), Expect = 7.441e-11
Identity = 33/114 (28.95%), Postives = 52/114 (45.61%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C+ C  +I  GP + A  K+WH E F C HC   ++   F ++    +C  C+   +   C  C   I    E     ++++H  CFLC  C   + N  F ++D +  CE
Sbjct:  372 TPMCAHCDMVIR-GPFLVAMGKSWHPEEFTCAHCSVSLSELGFVEEQGSVYCQHCYEEFFAPTCSRCHHKIL--GEVINALKQTWHVYCFLCASCQQPIRNDTFHLEDGEPYCE 482
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Zebrafish
Match: pdlim5a (PDZ and LIM domain 5a [Source:NCBI gene;Acc:436927])

HSP 1 Score: 85.5001 bits (210), Expect = 4.922e-19
Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            CS+C+  I  G  I A K+TWH  CF C  C++ I N +FH ++ EP+C+  + +L+   C  C   I    +F      ++H  CF+C VC  SL  + FF K  K +C+ HA
Sbjct:  434 CSRCHHKI-LGEVINALKQTWHVYCFLCASCQQPIRNDTFHLEDGEPYCERDFYSLFGTGCRGCDFPIEAGDKFLEALGGTWHDTCFVCTVCSVSLEGQTFFSKKGKPLCKKHA 546

HSP 2 Score: 61.6178 bits (148), Expect = 7.441e-11
Identity = 33/114 (28.95%), Postives = 52/114 (45.61%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C+ C  +I  GP + A  K+WH E F C HC   ++   F ++    +C  C+   +   C  C   I    E     ++++H  CFLC  C   + N  F ++D +  CE
Sbjct:  372 TPMCAHCDMVIR-GPFLVAMGKSWHPEEFTCAHCSVSLSELGFVEEQGSVYCQHCYEEFFAPTCSRCHHKIL--GEVINALKQTWHVYCFLCASCQQPIRNDTFHLEDGEPYCE 482
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Zebrafish
Match: pdlim5b (PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908])

HSP 1 Score: 84.3445 bits (207), Expect = 1.273e-18
Identity = 43/118 (36.44%), Postives = 65/118 (55.08%), Query Frame = 2 
Query:  179 MTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            +   C +C+K I  G  I A K+TWH  CF C  CK+ I N +FH ++ +P+C++ + +L+   C  C   I    +F      ++H  CF+C VC TSL  + FF K  K +C+ HA
Sbjct:  507 LAPTCFQCHKKI-IGEVINALKQTWHVNCFLCASCKQPIGNNTFHLEDGQPYCEKDYYSLFGTGCHGCDFPIEAGDKFLEALGFTWHDTCFVCAVCSTSLEGQTFFSKKDKPLCKKHA 623

HSP 2 Score: 66.2402 bits (160), Expect = 2.441e-12
Identity = 33/114 (28.95%), Postives = 56/114 (49.12%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C+ C  +I  GP + A  K+WH++ F C+HC+  + +  F ++    +C  C+       CF C + I    E     ++++H  CFLC  C   + N  F ++D +  CE
Sbjct:  449 TPMCAHCNTVIR-GPFLVAMGKSWHKDEFTCSHCRSSLADVGFVEERGSVYCVLCYEEFLAPTCFQCHKKII--GEVINALKQTWHVNCFLCASCKQPIGNNTFHLEDGQPYCE 559
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Zebrafish
Match: pdlim5b (PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908])

HSP 1 Score: 84.3445 bits (207), Expect = 1.273e-18
Identity = 43/118 (36.44%), Postives = 65/118 (55.08%), Query Frame = 2 
Query:  179 MTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            +   C +C+K I  G  I A K+TWH  CF C  CK+ I N +FH ++ +P+C++ + +L+   C  C   I    +F      ++H  CF+C VC TSL  + FF K  K +C+ HA
Sbjct:  507 LAPTCFQCHKKI-IGEVINALKQTWHVNCFLCASCKQPIGNNTFHLEDGQPYCEKDYYSLFGTGCHGCDFPIEAGDKFLEALGFTWHDTCFVCAVCSTSLEGQTFFSKKDKPLCKKHA 623

HSP 2 Score: 66.2402 bits (160), Expect = 2.441e-12
Identity = 33/114 (28.95%), Postives = 56/114 (49.12%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C+ C  +I  GP + A  K+WH++ F C+HC+  + +  F ++    +C  C+       CF C + I    E     ++++H  CFLC  C   + N  F ++D +  CE
Sbjct:  449 TPMCAHCNTVIR-GPFLVAMGKSWHKDEFTCSHCRSSLADVGFVEERGSVYCVLCYEEFLAPTCFQCHKKII--GEVINALKQTWHVNCFLCASCKQPIGNNTFHLEDGQPYCE 559
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Zebrafish
Match: ldb3a (LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6])

HSP 1 Score: 82.4185 bits (202), Expect = 5.554e-18
Identity = 38/114 (33.33%), Postives = 60/114 (52.63%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C++C   I  G  + A ++TWH  CF C  C K   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L  + F+ K  K +C+ HA
Sbjct:  377 CARCSTKI-MGEVMHALRQTWHTTCFVCAACGKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFVCAVCHVNLEGQPFYSKKDKPLCKKHA 489

HSP 2 Score: 66.6254 bits (161), Expect = 1.560e-12
Identity = 33/116 (28.45%), Postives = 55/116 (47.41%), Query Frame = 2 
Query:  176 NMTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            N T  C+ C  +I  GP + A  ++WH E F C++C   + + SF ++ +  +C+ C+   +   C  C   I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:  313 NRTPLCATCNNIIR-GPFLVALGRSWHPEEFNCHYCHTSLADVSFVEEQNNVYCENCYEEFFAPTCARCSTKIM--GEVMHALRQTWHTTCFVCAACGKPFGNSLFHMEDGEPYCE 425
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Xenopus
Match: spryd3 (SPRY domain containing 3 [Source:Xenbase;Acc:XB-GENE-5957038])

HSP 1 Score: 92.0485 bits (227), Expect = 4.902e-21
Identity = 38/114 (33.33%), Postives = 61/114 (53.51%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C++C   I  G  + A ++TWH  CF C  C+K   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L  + F+ K  K +C+ HA
Sbjct:  547 CARCNTKI-MGEVMHALRQTWHTTCFVCAACRKPFGNSLFHMEDGEPYCEKDYVALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHA 659

HSP 2 Score: 75.485 bits (184), Expect = 2.512e-15
Identity = 34/114 (29.82%), Postives = 53/114 (46.49%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C+ C  +I  GP + A  ++WH E F C HCK  + + SF ++    +C+ C+   +   C  C   I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:  485 TPLCASCNSIIR-GPFLVAMGRSWHPEEFNCAHCKTSLADVSFVEEQKGVYCERCYEQFFAPTCARCNTKIM--GEVMHALRQTWHTTCFVCAACRKPFGNSLFHMEDGEPYCE 595
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Xenopus
Match: spryd3 (SPRY domain containing 3 [Source:Xenbase;Acc:XB-GENE-5957038])

HSP 1 Score: 92.0485 bits (227), Expect = 4.911e-21
Identity = 38/114 (33.33%), Postives = 61/114 (53.51%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C++C   I  G  + A ++TWH  CF C  C+K   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L  + F+ K  K +C+ HA
Sbjct:  551 CARCNTKI-MGEVMHALRQTWHTTCFVCAACRKPFGNSLFHMEDGEPYCEKDYVALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHA 663

HSP 2 Score: 75.485 bits (184), Expect = 2.516e-15
Identity = 34/114 (29.82%), Postives = 53/114 (46.49%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C+ C  +I  GP + A  ++WH E F C HCK  + + SF ++    +C+ C+   +   C  C   I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:  489 TPLCASCNSIIR-GPFLVAMGRSWHPEEFNCAHCKTSLADVSFVEEQKGVYCERCYEQFFAPTCARCNTKIM--GEVMHALRQTWHTTCFVCAACRKPFGNSLFHMEDGEPYCE 599
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Xenopus
Match: arhgef40 (Rho guanine nucleotide exchange factor 40 [Source:Xenbase;Acc:XB-GENE-6050452])

HSP 1 Score: 82.8037 bits (203), Expect = 4.599e-18
Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHAK*NI 544
            C+KC K I +G  + A K TWH  CF C +CK  I N +F+ ++ +P+C++ +  ++  KC  C   I     F      S+H  CF+C +C  +L  K F+ K  K +C+ HA  N+
Sbjct:  289 CAKCKKKI-TGEIMHALKMTWHVPCFTCAYCKTPIRNRAFYMEDGKPYCEKDYEQMFGTKCRGCDFKIDAGDRFLEALGFSWHDTCFVCAICQMNLEGKTFYSKKDKPLCKTHAFSNV 405

HSP 2 Score: 61.6178 bits (148), Expect = 9.054e-11
Identity = 34/114 (29.82%), Postives = 55/114 (48.25%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C +C K+I  G  + A  + +H E F C+ C K +    F ++    FC  C++  +   C  C++ I    E     + ++H  CF C  C T + N+ F+M+D K  CE
Sbjct:  227 TPVCCQCNKIIR-GRFLLALGRYYHPEEFTCSQCHKVLEEGGFFEEKGSIFCPRCYDARFAPNCAKCKKKI--TGEIMHALKMTWHVPCFTCAYCKTPIRNRAFYMEDGKPYCE 337
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Xenopus
Match: arhgef40 (Rho guanine nucleotide exchange factor 40 [Source:Xenbase;Acc:XB-GENE-6050452])

HSP 1 Score: 83.1889 bits (204), Expect = 5.231e-18
Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHAK*NI 544
            C+KC K I +G  + A K TWH  CF C +CK  I N +F+ ++ +P+C++ +  ++  KC  C   I     F      S+H  CF+C +C  +L  K F+ K  K +C+ HA  N+
Sbjct:  405 CAKCKKKI-TGEIMHALKMTWHVPCFTCAYCKTPIRNRAFYMEDGKPYCEKDYEQMFGTKCRGCDFKIDAGDRFLEALGFSWHDTCFVCAICQMNLEGKTFYSKKDKPLCKTHAFSNV 521

HSP 2 Score: 61.6178 bits (148), Expect = 1.012e-10
Identity = 34/114 (29.82%), Postives = 55/114 (48.25%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C +C K+I  G  + A  + +H E F C+ C K +    F ++    FC  C++  +   C  C++ I    E     + ++H  CF C  C T + N+ F+M+D K  CE
Sbjct:  343 TPVCCQCNKIIR-GRFLLALGRYYHPEEFTCSQCHKVLEEGGFFEEKGSIFCPRCYDARFAPNCAKCKKKI--TGEIMHALKMTWHVPCFTCAYCKTPIRNRAFYMEDGKPYCE 453
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Xenopus
Match: spryd3 (SPRY domain containing 3 [Source:Xenbase;Acc:XB-GENE-5957038])

HSP 1 Score: 82.8037 bits (203), Expect = 6.224e-18
Identity = 38/114 (33.33%), Postives = 61/114 (53.51%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C++C   I  G  + A ++TWH  CF C  C+K   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L  + F+ K  K +C+ HA
Sbjct:  377 CARCNTKI-MGEVMHALRQTWHTTCFVCAACRKPFGNSLFHMEDGEPYCEKDYVALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHA 489

HSP 2 Score: 67.3958 bits (163), Expect = 1.307e-12
Identity = 34/114 (29.82%), Postives = 53/114 (46.49%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C+ C  +I  GP + A  ++WH E F C HCK  + + SF ++    +C+ C+   +   C  C   I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:  315 TPLCASCNSIIR-GPFLVAMGRSWHPEEFNCAHCKTSLADVSFVEEQKGVYCERCYEQFFAPTCARCNTKIM--GEVMHALRQTWHTTCFVCAACRKPFGNSLFHMEDGEPYCE 425
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Mouse
Match: Ldb3 (LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:1344412])

HSP 1 Score: 93.5893 bits (231), Expect = 8.895e-22
Identity = 40/114 (35.09%), Postives = 61/114 (53.51%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+KC   I  G  + A ++TWH  CF C  CKK   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L  + F+ K  K +C+ HA
Sbjct:  544 CAKCNTKI-MGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHA 656

HSP 2 Score: 70.8626 bits (172), Expect = 6.959e-14
Identity = 32/114 (28.07%), Postives = 52/114 (45.61%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C  C  +I  GP + A  ++WH E F C +CK  + +  F ++ +  +C+ C+   +   C  C   I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:  482 TPLCGHCNNVIR-GPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKCNTKIM--GEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCE 592
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Mouse
Match: Ldb3 (LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:1344412])

HSP 1 Score: 93.5893 bits (231), Expect = 9.755e-22
Identity = 40/114 (35.09%), Postives = 61/114 (53.51%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+KC   I  G  + A ++TWH  CF C  CKK   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L  + F+ K  K +C+ HA
Sbjct:  606 CAKCNTKI-MGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHA 718

HSP 2 Score: 70.8626 bits (172), Expect = 7.184e-14
Identity = 32/114 (28.07%), Postives = 52/114 (45.61%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C  C  +I  GP + A  ++WH E F C +CK  + +  F ++ +  +C+ C+   +   C  C   I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:  544 TPLCGHCNNVIR-GPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKCNTKIM--GEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCE 654
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Mouse
Match: Ldb3 (LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:1344412])

HSP 1 Score: 92.0485 bits (227), Expect = 2.976e-21
Identity = 40/114 (35.09%), Postives = 61/114 (53.51%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+KC   I  G  + A ++TWH  CF C  CKK   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L  + F+ K  K +C+ HA
Sbjct:  567 CAKCNTKI-MGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHA 679

HSP 2 Score: 69.707 bits (169), Expect = 1.762e-13
Identity = 32/114 (28.07%), Postives = 52/114 (45.61%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C  C  +I  GP + A  ++WH E F C +CK  + +  F ++ +  +C+ C+   +   C  C   I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:  505 TPLCGHCNNVIR-GPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKCNTKIM--GEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCE 615
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Mouse
Match: Ldb3 (LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:1344412])

HSP 1 Score: 92.0485 bits (227), Expect = 3.631e-21
Identity = 40/114 (35.09%), Postives = 61/114 (53.51%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+KC   I  G  + A ++TWH  CF C  CKK   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L  + F+ K  K +C+ HA
Sbjct:  562 CAKCNTKI-MGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHA 674

HSP 2 Score: 69.3218 bits (168), Expect = 2.105e-13
Identity = 32/114 (28.07%), Postives = 52/114 (45.61%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C  C  +I  GP + A  ++WH E F C +CK  + +  F ++ +  +C+ C+   +   C  C   I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:  500 TPLCGHCNNVIR-GPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKCNTKIM--GEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCE 610
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Mouse
Match: Ldb3 (LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:1344412])

HSP 1 Score: 82.4185 bits (202), Expect = 6.624e-18
Identity = 40/114 (35.09%), Postives = 61/114 (53.51%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+KC   I  G  + A ++TWH  CF C  CKK   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L  + F+ K  K +C+ HA
Sbjct:  505 CAKCNTKIM-GEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHA 617

HSP 2 Score: 58.9214 bits (141), Expect = 8.751e-10
Identity = 32/114 (28.07%), Postives = 52/114 (45.61%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C  C  +I  GP + A  ++WH E F C +CK  + +  F ++ +  +C+ C+   +   C  C   I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:  443 TPLCGHCNNVIR-GPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKCNTKIM--GEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCE 553
[Close]
BLAST of Four and a half LIM domains 5 vs. UniProt/SwissProt
Match: sp|Q9JKS4|LDB3_MOUSE (LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.824e-21
Identity = 40/114 (35.09%), Postives = 61/114 (53.51%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+KC   I  G  + A ++TWH  CF C  CKK   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L  + F+ K  K +C+ HA
Sbjct:  606 CAKCNTKI-MGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHA 718

HSP 2 Score: 70.8626 bits (172), Expect = 5.025e-13
Identity = 32/114 (28.07%), Postives = 52/114 (45.61%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C  C  +I  GP + A  ++WH E F C +CK  + +  F ++ +  +C+ C+   +   C  C   I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:  544 TPLCGHCNNVIR-GPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKCNTKIM--GEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCE 654
[Close]
BLAST of Four and a half LIM domains 5 vs. UniProt/SwissProt
Match: sp|O75112|LDB3_HUMAN (LIM domain-binding protein 3 OS=Homo sapiens OX=9606 GN=LDB3 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 6.833e-21
Identity = 39/114 (34.21%), Postives = 61/114 (53.51%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+KC   I  G  + A ++TWH  CF C  CKK   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L  + F+ K  + +C+ HA
Sbjct:  610 CAKCNTKI-MGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDRPLCKKHA 722

HSP 2 Score: 71.2478 bits (173), Expect = 3.101e-13
Identity = 32/114 (28.07%), Postives = 52/114 (45.61%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C  C  +I  GP + A  ++WH E F C +CK  + +  F ++ +  +C+ C+   +   C  C   I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:  548 TPLCGHCNNVIR-GPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPLCAKCNTKIM--GEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCE 658
[Close]
BLAST of Four and a half LIM domains 5 vs. UniProt/SwissProt
Match: sp|A1ZA47|ZASP_DROME (PDZ and LIM domain protein Zasp OS=Drosophila melanogaster OX=7227 GN=Zasp52 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 4.265e-18
Identity = 38/115 (33.04%), Postives = 57/115 (49.57%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHAK 535
            CSKC   I+ G  + A  K +H ECF C  C K   N  F  ++   +C+  WN L+  KCF+C   +     +      +YH +CF C  C  +L  + F+ K  +  C+NHA+
Sbjct: 2081 CSKCAGKIK-GDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHAR 2194

HSP 2 Score: 55.4546 bits (132), Expect = 9.232e-8
Identity = 36/132 (27.27%), Postives = 56/132 (42.42%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQC--NHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHAK*NIKF*DEPNFACSF 580
            C+ C   I  GP I A  + W  + F C   +C++ + +  F ++  + +C+ C+       C  C   I  +        K +H +CF C  C     N+ FF++D    CE  A  N  F     FAC F
Sbjct: 2020 CNSCNVQIR-GPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDC--LNAIGKHFHPECFTCGQCGKIFGNRPFFLEDGNAYCE--ADWNELF-TTKCFACGF 2145
[Close]
BLAST of Four and a half LIM domains 5 vs. UniProt/SwissProt
Match: sp|Q679P3|PDLI7_CHICK (PDZ and LIM domain protein 7 OS=Gallus gallus OX=9031 GN=PDLIM7 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.488e-18
Identity = 41/114 (35.96%), Postives = 62/114 (54.39%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+KC K I +G  + A K TWH +CF C  CK  I N +F+ +  +P+C+  +  ++  KC  C   I     F      S+H  CF+C +C T+L  K F+ K  K +C++HA
Sbjct:  300 CAKCKKKI-TGEVMHALKMTWHVQCFTCAACKTPIRNRAFYMEEGQPYCERDYEKMFGTKCRGCDFKIDAGDRFLEALGFSWHDTCFVCAICQTNLEGKTFYSKKDKPLCKSHA 412

HSP 2 Score: 63.929 bits (154), Expect = 1.042e-10
Identity = 35/117 (29.91%), Postives = 57/117 (48.72%), Query Frame = 2 
Query:  176 NMTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCEN 526
              T  C KC K+I  G  + A    +H E F C  C+K +    F ++    FC +C++T Y   C  C++ I    E     + ++H +CF C  C T + N+ F+M++ +  CE 
Sbjct:  236 GRTPLCYKCNKIIR-GRYLVALGHYYHPEEFTCCQCRKVLDEGGFFEEKGSIFCPKCYDTRYAPSCAKCKKKI--TGEVMHALKMTWHVQCFTCAACKTPIRNRAFYMEEGQPYCER 349
[Close]
BLAST of Four and a half LIM domains 5 vs. UniProt/SwissProt
Match: sp|Q6INU3|PDLI7_XENLA (PDZ and LIM domain protein 7 OS=Xenopus laevis OX=8355 GN=pdlim7 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.640e-17
Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHAK*NI 544
            C+KC K I +G  + A K TWH  CF C +CK  I N +F+ ++ +P+C++ +  ++  KC  C   I     F      S+H  CF+C +C  +L  K F+ K  K +C+ HA  N+
Sbjct:  305 CAKCKKKI-TGEIMHALKMTWHVPCFTCAYCKTPIRNRAFYMEDGKPYCEKDYEQMFGTKCRGCDFKIDAGDRFLEALGFSWHDTCFVCAICQINLEGKTFYSKKDKPLCKTHAFSNV 421

HSP 2 Score: 62.003 bits (149), Expect = 4.765e-10
Identity = 35/114 (30.70%), Postives = 56/114 (49.12%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  CS+C K+I  G  + A  + +H E F C+ C K +    F ++    FC  C++  +   C  C++ I    E     + ++H  CF C  C T + N+ F+M+D K  CE
Sbjct:  243 TPVCSQCNKIIR-GRFLLALGRYYHPEEFTCSQCHKVLEEGGFFEEKGSIFCPCCYDARFAPNCAKCKKKI--TGEIMHALKMTWHVPCFTCAYCKTPIRNRAFYMEDGKPYCE 353
[Close]
BLAST of Four and a half LIM domains 5 vs. TrEMBL
Match: A0A183A5D2 (Uncharacterized protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS2168 PE=4 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.620e-27
Identity = 48/118 (40.68%), Postives = 70/118 (59.32%), Query Frame = 2 
Query:  179 MTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            M+  C+KC +   +G  + A  K WH +CF C  CK R+ N SFH K+D P+C +CW   +Q +C +C+Q I    ++ T ++ +YHK CF C  CH SLA K+F +KD+   C  H 
Sbjct:    1 MSGMCAKCAQPFTAGSILTALDKKWHPDCFLCTICKGRLANKSFHVKDDSPYCTDCWKEHFQPRCATCKQIIDPCEQYMTYNDNAYHKGCFTCASCHQSLAGKQFCIKDNGYYCPEHV 118
[Close]
BLAST of Four and a half LIM domains 5 vs. TrEMBL
Match: G4V9H0 (Putative four and A half lim domains OS=Schistosoma mansoni OX=6183 GN=Smp_012810 PE=4 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.129e-27
Identity = 49/117 (41.88%), Postives = 70/117 (59.83%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            T  C+KC +   SG  + A  K WH ECF C  CK+ + + SFH KND+PFC  CW   +Q +C +C + I  + ++ T ++++YHK CF C  CH SLA K+F +KD+   C  H 
Sbjct:    3 TMMCAKCARPFTSGSILSALDKKWHPECFVCTICKRTLADQSFHVKNDDPFCANCWKENFQPRCATCSKIIDPSEQYMTYNDRAYHKNCFTCAACHQSLAGKQFCIKDNGYYCPEHV 119
[Close]
BLAST of Four and a half LIM domains 5 vs. TrEMBL
Match: A0A430Q741 (Uncharacterized protein OS=Schistosoma bovis OX=6184 GN=DC041_0007506 PE=4 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.129e-27
Identity = 49/117 (41.88%), Postives = 70/117 (59.83%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            T  C+KC +   SG  + A  K WH ECF C  CK+ + + SFH KND+PFC  CW   +Q +C +C + I  + ++ T ++++YHK CF C  CH SLA K+F +KD+   C  H 
Sbjct:    3 TMMCAKCARPFTSGSILSALDKKWHPECFVCTICKRTLADQSFHVKNDDPFCANCWKENFQPRCATCSKIIDPSEQYMTYNDRAYHKNCFTCAACHQSLAGKQFCIKDNGYYCPEHV 119
[Close]
BLAST of Four and a half LIM domains 5 vs. TrEMBL
Match: A0A504YT68 (Four and a half LIM domains protein 3 OS=Fasciola gigantica OX=46835 GN=FGIG_03761 PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 6.670e-27
Identity = 48/118 (40.68%), Postives = 71/118 (60.17%), Query Frame = 2 
Query:  179 MTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            M+  C+KC +   +G  + A  K WH +CF C  CK R+ N SFH K+D P+C +CW   +Q +C +C+Q I  + ++ T ++ +YHK CF C  CH SLA K+F +KD+   C  H 
Sbjct:    1 MSGMCAKCAQPFTAGSILTALDKKWHPDCFLCTICKGRLANKSFHVKDDCPYCTDCWKEHFQPRCSTCKQIIDPSEQYMTYNDNAYHKGCFTCASCHQSLAGKQFCIKDNGYYCPEHV 118
[Close]
BLAST of Four and a half LIM domains 5 vs. TrEMBL
Match: A0A2H1CS94 (Four and a half LIM domains protein 3 OS=Fasciola hepatica OX=6192 GN=D915_001319 PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 6.670e-27
Identity = 48/118 (40.68%), Postives = 71/118 (60.17%), Query Frame = 2 
Query:  179 MTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            M+  C+KC +   +G  + A  K WH +CF C  CK R+ N SFH K+D P+C +CW   +Q +C +C+Q I  + ++ T ++ +YHK CF C  CH SLA K+F +KD+   C  H 
Sbjct:    1 MSGMCAKCAQPFTAGSILTALDKKWHPDCFLCTICKGRLANKSFHVKDDCPYCTDCWKEHFQPRCSTCKQIIDPSEQYMTYNDNAYHKGCFTCASCHQSLAGKQFCIKDNGYYCPEHV 118
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Cavefish
Match: ldb3a (LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6])

HSP 1 Score: 82.4185 bits (202), Expect = 1.371e-18
Identity = 38/114 (33.33%), Postives = 60/114 (52.63%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C++C   I  G  + A ++TWH  CF C  C K   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L  + F+ K  K +C+ HA
Sbjct:  160 CARCNSKI-MGEVMHALRQTWHTTCFVCAACGKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFVCAVCHMNLEGQPFYSKKDKPLCKKHA 272

HSP 2 Score: 67.781 bits (164), Expect = 2.416e-13
Identity = 33/116 (28.45%), Postives = 54/116 (46.55%), Query Frame = 2 
Query:  176 NMTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            N T  C  C  +I  GP + A  ++WH E F C++C   + + SF ++ +  +C+ C+   +   C  C   I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:   96 NRTPMCGACNNIIR-GPFLVALGRSWHPEEFNCHYCHTSLADVSFVEEQNSVYCENCYREFFAPTCARCNSKIM--GEVMHALRQTWHTTCFVCAACGKPFGNSLFHMEDGEPYCE 208
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Cavefish
Match: pdlim7 (PDZ and LIM domain 7 [Source:NCBI gene;Acc:103047884])

HSP 1 Score: 82.0333 bits (201), Expect = 5.946e-18
Identity = 41/114 (35.96%), Postives = 60/114 (52.63%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C KC K I +G  + A K T+H +CF C  CK  I N +F+ +  EP+C+  +  ++  KC  C   I     F      S+H  CF+C +CH +L  K F+ K  K +C+ HA
Sbjct:  337 CDKCKKKI-TGEIMHALKMTYHVQCFLCAACKTPIRNQAFYMEEGEPYCERDYEKMFGTKCHGCDFKIDAGDRFLEALGYSWHDTCFVCALCHINLEGKTFYSKKDKPLCKGHA 449

HSP 2 Score: 67.3958 bits (163), Expect = 6.484e-13
Identity = 34/114 (29.82%), Postives = 57/114 (50.00%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C  C K+I  G  + A  ++WH E F C  C+  +    F ++    +C +C++  Y   C  C++ I    E     + +YH +CFLC  C T + N+ F+M++ +  CE
Sbjct:  275 TPLCGACNKIIR-GRYVVALGRSWHPEEFTCCQCRVMLDEGGFFEEKGSVYCTKCYDNRYAPNCDKCKKKI--TGEIMHALKMTYHVQCFLCAACKTPIRNQAFYMEEGEPYCE 385
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Cavefish
Match: pdlim7 (PDZ and LIM domain 7 [Source:NCBI gene;Acc:103047884])

HSP 1 Score: 82.0333 bits (201), Expect = 6.908e-18
Identity = 41/114 (35.96%), Postives = 60/114 (52.63%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C KC K I +G  + A K T+H +CF C  CK  I N +F+ +  EP+C+  +  ++  KC  C   I     F      S+H  CF+C +CH +L  K F+ K  K +C+ HA
Sbjct:  361 CDKCKKKI-TGEIMHALKMTYHVQCFLCAACKTPIRNQAFYMEEGEPYCERDYEKMFGTKCHGCDFKIDAGDRFLEALGYSWHDTCFVCALCHINLEGKTFYSKKDKPLCKGHA 473

HSP 2 Score: 68.1662 bits (165), Expect = 4.137e-13
Identity = 34/114 (29.82%), Postives = 57/114 (50.00%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C  C K+I  G  + A  ++WH E F C  C+  +    F ++    +C +C++  Y   C  C++ I    E     + +YH +CFLC  C T + N+ F+M++ +  CE
Sbjct:  299 TPLCGACNKIIR-GRYVVALGRSWHPEEFTCCQCRVMLDEGGFFEEKGSVYCTKCYDNRYAPNCDKCKKKI--TGEIMHALKMTYHVQCFLCAACKTPIRNQAFYMEEGEPYCE 409
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Cavefish
Match: pdlim7 (PDZ and LIM domain 7 [Source:NCBI gene;Acc:103047884])

HSP 1 Score: 81.6481 bits (200), Expect = 7.257e-18
Identity = 41/114 (35.96%), Postives = 60/114 (52.63%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C KC K I +G  + A K T+H +CF C  CK  I N +F+ +  EP+C+  +  ++  KC  C   I     F      S+H  CF+C +CH +L  K F+ K  K +C+ HA
Sbjct:  322 CDKCKKKI-TGEIMHALKMTYHVQCFLCAACKTPIRNQAFYMEEGEPYCERDYEKMFGTKCHGCDFKIDAGDRFLEALGYSWHDTCFVCALCHINLEGKTFYSKKDKPLCKGHA 434

HSP 2 Score: 67.781 bits (164), Expect = 4.478e-13
Identity = 34/114 (29.82%), Postives = 57/114 (50.00%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C  C K+I  G  + A  ++WH E F C  C+  +    F ++    +C +C++  Y   C  C++ I    E     + +YH +CFLC  C T + N+ F+M++ +  CE
Sbjct:  260 TPLCGACNKIIR-GRYVVALGRSWHPEEFTCCQCRVMLDEGGFFEEKGSVYCTKCYDNRYAPNCDKCKKKI--TGEIMHALKMTYHVQCFLCAACKTPIRNQAFYMEEGEPYCE 370
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Cavefish
Match: pdlim7 (PDZ and LIM domain 7 [Source:NCBI gene;Acc:103047884])

HSP 1 Score: 81.2629 bits (199), Expect = 1.107e-17
Identity = 41/114 (35.96%), Postives = 60/114 (52.63%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C KC K I +G  + A K T+H +CF C  CK  I N +F+ +  EP+C+  +  ++  KC  C   I     F      S+H  CF+C +CH +L  K F+ K  K +C+ HA
Sbjct:  393 CDKCKKKI-TGEIMHALKMTYHVQCFLCAACKTPIRNQAFYMEEGEPYCERDYEKMFGTKCHGCDFKIDAGDRFLEALGYSWHDTCFVCALCHINLEGKTFYSKKDKPLCKGHA 505

HSP 2 Score: 67.0106 bits (162), Expect = 9.069e-13
Identity = 34/114 (29.82%), Postives = 57/114 (50.00%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C  C K+I  G  + A  ++WH E F C  C+  +    F ++    +C +C++  Y   C  C++ I    E     + +YH +CFLC  C T + N+ F+M++ +  CE
Sbjct:  331 TPLCGACNKIIR-GRYVVALGRSWHPEEFTCCQCRVMLDEGGFFEEKGSVYCTKCYDNRYAPNCDKCKKKI--TGEIMHALKMTYHVQCFLCAACKTPIRNQAFYMEEGEPYCE 441
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007081.1 (pep scaffold:Pmarinus_7.0:GL476780:360940:430661:-1 gene:ENSPMAG00000006392.1 transcript:ENSPMAT00000007081.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 84.3445 bits (207), Expect = 2.389e-19
Identity = 40/114 (35.09%), Postives = 61/114 (53.51%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+KC K I  G  + A ++TWH  CF C  C K   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L  + F+ K  K +C+ HA
Sbjct:  478 CAKCRKKIM-GEIMHALRQTWHTTCFVCASCGKPFGNSLFHMEDGEPYCEKDYVVLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHA 590

HSP 2 Score: 63.929 bits (154), Expect = 2.201e-12
Identity = 33/114 (28.95%), Postives = 52/114 (45.61%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C +C ++I  GP + A  K+WH   F C  C   +T   F ++    +C+ C+   +   C  CR+ I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:  416 TPMCGQCNQIIR-GPFLVALGKSWHPAEFNCAQCHTTLTETGFVEEQGNVYCETCYEKYFAPDCAKCRKKIMG--EIMHALRQTWHTTCFVCASCGKPFGNSLFHMEDGEPYCE 526
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Sea Lamprey
Match: fhl3b (four and a half LIM domains 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8356])

HSP 1 Score: 73.9442 bits (180), Expect = 1.927e-16
Identity = 39/117 (33.33%), Postives = 57/117 (48.72%), Query Frame = 2 
Query:  176 NMTDRCSKCYKLIESGPAIEAFK-KTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            +M D C  C + I  G A  A+K +TWH+ CF C  C + I   SF    DE +C  C       +CF+C + + E    +   E +YH++C +C  C+T LA      +   L CE
Sbjct:   48 DMGDSCVSCKRGIREGVAKVAYKGRTWHERCFACARCMETIGTKSFVPHGDEIYCVSCNEKKTATRCFTCHKPVTEKGVVY--KEHTYHRECLVCIGCNTPLAGMNMCTRGELLYCE 162

HSP 2 Score: 58.9214 bits (141), Expect = 5.251e-11
Identity = 33/117 (28.21%), Postives = 55/117 (47.01%), Query Frame = 2 
Query:  188 RCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSI--AENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            RC  C+K +     +   + T+H+EC  C  C   +   +   + +  +C+ C+   Y KKC SCR+ I  A   +F T     +H +CF C  C  ++A K F  +   + C + A
Sbjct:  113 RCFTCHKPVTEKGVVYK-EHTYHRECLVCIGCNTPLAGMNMCTRGELLYCEPCFEKKYSKKCTSCRKPITSAAGAKFLTHDSLEWHTECFKCKRCGLNMAGKGFVARGDDIFCGDCA 228

HSP 3 Score: 45.8246 bits (107), Expect = 1.590e-6
Identity = 23/94 (24.47%), Postives = 41/94 (43.62%), Query Frame = 2 
Query:  251 WHQECFQCNHCKKRITNPS-FHQKNDEPFCDECWNTL---YQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVC 520
            WH+ CF+C+ C   I   + +  +  E  C  C  +        C SC++ I E         +++H++CF C  C  ++  K F     ++ C
Sbjct:    9 WHEGCFKCSECATPIGAATEYLLEGKEIVCKTCATSPAGDMGDSCVSCKRGIREGVAKVAYKGRTWHERCFACARCMETIGTKSFVPHGDEIYC 102
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Sea Lamprey
Match: PXN (paxillin [Source:HGNC Symbol;Acc:HGNC:9718])

HSP 1 Score: 72.4034 bits (176), Expect = 2.681e-15
Identity = 39/123 (31.71%), Postives = 61/123 (49.59%), Query Frame = 2 
Query:  173 FNMTDRCSKCYKLIESGPAIE----AFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENH 529
            F  + RC+ C     SGP ++    A  KTWH E F C  C     +  FH+K+ +P+C + +  ++  KC  C ++I EN  + +     +H +CF+C  C T   N  FF  + +  CE H
Sbjct:  375 FLFSPRCAYC-----SGPILDKVVTALDKTWHPEHFFCVQCGHFFGDEGFHEKDGKPYCRQDYFEMFAPKCGGCSRAIVEN--YISALSALWHPECFVCRECFTPFINGSFFEHEGQPYCEVH 490

HSP 2 Score: 61.2326 bits (147), Expect = 1.717e-11
Identity = 32/111 (28.83%), Postives = 58/111 (52.25%), Query Frame = 2 
Query:  188 RCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVC 520
            +C+ C K I +G  + A  +TWH E F C  C++ I   +F +++  P+C++ ++ L+  +C  C   I +  +  T  +K++H + F C  C     ++ F  KD K  C
Sbjct:  321 QCAACLKPI-AGQVVTAMGRTWHPEHFVCTECQEEIGARNFFERDGLPYCEKDYHFLFSPRCAYCSGPILD--KVVTALDKTWHPEHFFCVQCGHFFGDEGFHEKDGKPYC 428

HSP 3 Score: 45.8246 bits (107), Expect = 2.651e-6
Identity = 30/111 (27.03%), Postives = 45/111 (40.54%), Query Frame = 2 
Query:  188 RCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVC 520
            +C  C + I     I A    WH ECF C  C     N SF +   +P+C+  ++      C  C++ I       T   K +H + F+C  C   L    F  ++ K  C
Sbjct:  439 KCGGCSRAIVEN-YISALSALWHPECFVCRECFTPFINGSFFEHEGQPYCEVHYHERRGSLCSGCQKPI--TGRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYC 546
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Sea Lamprey
Match: PXN (paxillin [Source:HGNC Symbol;Acc:HGNC:9718])

HSP 1 Score: 69.707 bits (169), Expect = 5.022e-15
Identity = 32/118 (27.12%), Postives = 61/118 (51.69%), Query Frame = 2 
Query:  179 MTDRCSKCYK-LIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENH 529
             + RC+ C + ++++   + A  +TWH E F C  C +      FH+++ +P+C + +  ++  KC  C ++I +N  + +     +H +CF+C  C T   N  FF  + +  CE H
Sbjct:   46 FSPRCAYCNEAVMDNQRVVTALDRTWHPEHFFCAQCGRPFGEEGFHERDGKPYCRQDYYGMFAPKCNGCSRAIMQN--YLSALNTVWHPECFICRECFTPFINGSFFEHEGQPYCEVH 161

HSP 2 Score: 69.707 bits (169), Expect = 6.030e-15
Identity = 28/98 (28.57%), Postives = 54/98 (55.10%), Query Frame = 2 
Query:  227 AIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVC 520
             + A  +TWH E F C HC+  I + +F +K+ +P+C+E +++L+  +C  C +++ +N    T  ++++H + F C  C      + F  +D K  C
Sbjct:    2 VVTAMGRTWHPEHFVCVHCQVEIGSRNFFEKDGQPYCEEDYHSLFSPRCAYCNEAVMDNQRVVTALDRTWHPEHFFCAQCGRPFGEEGFHERDGKPYC 99

HSP 3 Score: 45.4394 bits (106), Expect = 2.112e-6
Identity = 28/115 (24.35%), Postives = 47/115 (40.87%), Query Frame = 2 
Query:  179 MTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
               +C+ C + I     + A    WH ECF C  C     N SF +   +P+C+  ++      C  C++ I       +   K +H + F+C  C   L    F  ++ K  C+
Sbjct:  107 FAPKCNGCSRAIMQN-YLSALNTVWHPECFICRECFTPFINGSFFEHEGQPYCEVHYHERRGSLCSGCQKPITGRC--ISAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQ 218
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Sea Lamprey
Match: fhl5 (four and a half LIM domains 5 [Source:ZFIN;Acc:ZDB-GENE-040822-3])

HSP 1 Score: 66.2402 bits (160), Expect = 5.350e-14
Identity = 31/90 (34.44%), Postives = 53/90 (58.89%), Query Frame = 2 
Query:  266 FQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVC-ENHA 532
            + C++CK+ +    +  + + P+C  C+ TLY   C SC+Q I  +++  +  ++ +H+ CF C  C  SLA+K F  +D KL+C E HA
Sbjct:   13 YDCHYCKESLLGKKYVLREENPYCVRCYETLYTHACESCKQPIGCDSKDLSYKDRHWHEGCFKCATCERSLADKAFSARDEKLLCTECHA 102

HSP 2 Score: 47.3654 bits (111), Expect = 4.086e-7
Identity = 23/91 (25.27%), Postives = 42/91 (46.15%), Query Frame = 2 
Query:  251 WHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAE-NTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVC 520
            WH+ CF+C  C++ + + +F  ++++  C EC    Y  KC    +  +   T        S+H+ CF C  C   + +K F  ++    C
Sbjct:   69 WHEGCFKCATCERSLADKAFSARDEKLLCTECHANHYSAKCAGISKLFSPVGTRKMEFRGSSWHETCFGCARCQQPIGSKSFVPREKDQYC 159
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Nematostella
Match: LIMPET (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RFX6])

HSP 1 Score: 77.7962 bits (190), Expect = 7.253e-17
Identity = 37/110 (33.64%), Postives = 62/110 (56.36%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVC 520
            C KC ++I++  +++    T+H ECF C+HC K +    F ++     C  C+   Y K+C +C   I  NT+F    EK +H++CF C  C+  LA +KF ++D + +C
Sbjct:  440 CVKCNQVIKTS-SVQHAGSTYHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRERYAKRCGACHNLIEGNTKFVAYDEKYFHRECFTCCKCNKPLAGEKFRIRDGEKIC 548

HSP 2 Score: 73.1738 bits (178), Expect = 2.942e-15
Identity = 35/118 (29.66%), Postives = 59/118 (50.00%), Query Frame = 2 
Query:  176 NMTDRCSKCYKLIESGPA-IEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCEN 526
            N  +RC  C + I  G   ++   K WH+ CF+C+ C K++ N  F  K+++  C  C      K C +C    A   +      K++H KCF+C+ C   + +K+F  +D + +C N
Sbjct:  313 NFANRCEACGEPIGPGSKDVDVRSKHWHEGCFKCSQCSKQLMNEGFTLKDEKLICHGCRGINPSKVCAACNGDFAPGEKKVGYQSKTFHDKCFICDECKQPIGSKQFIRRDERRLCNN 430

HSP 3 Score: 71.633 bits (174), Expect = 1.113e-14
Identity = 34/114 (29.82%), Postives = 58/114 (50.88%), Query Frame = 2 
Query:  179 MTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVC 520
            +  RC+ C +LI  G   +A +K WH     C++C + ++N  F      P C  C++  +  +C +C + I   ++      K +H+ CF C+ C   L N+ F +KD KL+C
Sbjct:  254 LKPRCAGCEELIYVGEYSQALEKNWHPGHLCCSYCDESLSNQKFVTVEGSPSCFRCYDENFANRCEACGEPIGPGSKDVDVRSKHWHEGCFKCSQCSKQLMNEGFTLKDEKLIC 367

HSP 4 Score: 60.8474 bits (146), Expect = 4.337e-11
Identity = 34/119 (28.57%), Postives = 60/119 (50.42%), Query Frame = 2 
Query:  173 FNMTDRCSKCYKLIESGPAIEAFK-KTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCEN 526
             N +  C+ C      G     ++ KT+H +CF C+ CK+ I +  F ++++   C+ C+++ + K C  C Q I   T     +  +YH +CF C+ C   LA   F  ++ + VC+N
Sbjct:  373 INPSKVCAACNGDFAPGEKKVGYQSKTFHDKCFICDECKQPIGSKQFIRRDERRLCNNCFDSKFAKVCVKCNQVI--KTSSVQHAGSTYHSECFTCHHCDKPLAGSPFTKQEGRNVCQN 489
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Nematostella
Match: EDO34191 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQ31])

HSP 1 Score: 73.9442 bits (180), Expect = 8.964e-17
Identity = 34/94 (36.17%), Postives = 49/94 (52.13%), Query Frame = 2 
Query:  245 KTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCEN 526
            K  H ECF C HC+  +   +F  ++D   C +C    Y K+C +CRQ I    +F T  E +YH  CF+C+ C   LA K F   +   VC++
Sbjct:    6 KPHHSECFVCFHCRTPLAGKTFQMRDDRKVCKDCNRIHYAKRCVACRQYIEGTVKFVTRDEGTYHSDCFVCSRCRKPLAGKTFTEHEGSWVCDD 99

HSP 2 Score: 71.633 bits (174), Expect = 5.623e-16
Identity = 40/117 (34.19%), Postives = 61/117 (52.14%), Query Frame = 2 
Query:  188 RCSKCYKLIESGPA-IEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCN--VCHTSLANKKFFMK-DSKLVCEN 526
            RC  C + IE     +   + T+H +CF C+ C+K +   +F +      CD+C++  Y K+C  C QS+  N EF    EK YH +CF+C    C   L+  KF +K D + +C N
Sbjct:   47 RCVACRQYIEGTVKFVTRDEGTYHSDCFVCSRCRKPLAGKTFTEHEGSWVCDDCYHDRYAKRCNMCHQSLEANVEFVKYDEKLYHNECFVCQNPRCRKPLSGAKFALKSDGRRMCLN 163
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Nematostella
Match: EDO41100 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S5D2])

HSP 1 Score: 74.7146 bits (182), Expect = 7.703e-16
Identity = 37/114 (32.46%), Postives = 61/114 (53.51%), Query Frame = 2 
Query:  170 IFNMTDRCSKCYKLIESGPA-IEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDS 508
            + N    C  C ++I+SG + +E     WH+ CF+C +C + I    F  K+D  FC  C+ + + K+C SC + + E    +    +++HK CF C  CH SLA+  F ++D 
Sbjct:  348 VANYQKECCACGQIIDSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGVLYNG--ETWHKACFSCYFCHRSLASAAFSVRDG 459

HSP 2 Score: 74.7146 bits (182), Expect = 9.318e-16
Identity = 37/116 (31.90%), Postives = 67/116 (57.76%), Query Frame = 2 
Query:  182 TDRCSKCYK-LIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCEN 526
            + RC+ C + L+E G       +TWH+ CF C  C + + + +F  ++   +C EC+   Y K+C  C ++I    E++T  E ++HK+CF+C+ C  SLA++ F  +  +L+C +
Sbjct:  413 SKRCASCGEPLLEGGVLYNG--ETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQCEICLKAIV-GGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDELLCGD 525

HSP 3 Score: 70.0922 bits (170), Expect = 3.353e-14
Identity = 34/98 (34.69%), Postives = 51/98 (52.04%), Query Frame = 2 
Query:  188 RCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIA-ENTEFFTTSEKSYHKKCFLCNVCHTSL 478
            RC  C +LI +G    A  K WH   FQC  C   IT   F  + D+P C +C+   Y  +C +C Q I  E+ +  +  ++ +H KCF+C++C   L
Sbjct:  231 RCGGCDELIFTGEYTVAMNKNWHLGHFQCQTCDHSITGRQFIVRGDKPVCTDCFKDSYAHECEACHQKIGPESRDISSDDDRHWHDKCFICDICRRPL 328

HSP 4 Score: 54.6842 bits (130), Expect = 5.910e-9
Identity = 31/123 (25.20%), Postives = 59/123 (47.97%), Query Frame = 2 
Query:  173 FNMTDRCSKC-YKLIESGPAIEA----FKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCEN 526
            F    RC++C + ++ S PA+ A     + ++H  CF C  C + +   ++ Q  D+ +C   +  L + +C  C + I    E+     K++H   F C  C  S+  ++F ++  K VC +
Sbjct:  161 FGRRQRCARCSHPILRSEPAVVAENIGAEASFHPGCFTCETCNELLVELTYFQHADKVYCGRHFAELQKSRCGGCDELIF-TGEYTVAMNKNWHLGHFQCQTCDHSITGRQFIVRGDKPVCTD 282

HSP 5 Score: 53.9138 bits (128), Expect = 1.007e-8
Identity = 27/95 (28.42%), Postives = 44/95 (46.32%), Query Frame = 2 
Query:  245 KTWHQECFQCNHCKKRI-TNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCEN 526
            + WH +CF C+ C++ + +  S H    +  C++C+   YQK+C +C Q I         S   +H+ CF C  C  ++    F  KD    C  
Sbjct:  312 RHWHDKCFICDICRRPLKSEGSLHSTETKSCCNKCYVANYQKECCACGQIIDSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPG 406
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Nematostella
Match: LDB3 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKY2])

HSP 1 Score: 70.4774 bits (171), Expect = 1.659e-15
Identity = 35/114 (30.70%), Postives = 56/114 (49.12%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C  C + I  GP ++A  KT+H E F C+ C K+I +  F+     P+C+ C+  L+  KC  C ++I     +    + S+H  CF C+ C+  L   +F+    K  C  H 
Sbjct:   52 CESCKQPI-VGPCVQAIGKTFHPEHFTCSSCSKQIGSEGFNVDRGMPYCEMCYKKLFCVKCAGCNRAIGGGDRWVEAIDVSWHATCFKCSTCNKLLEGSQFYAYGGKPFCVLHG 164

HSP 2 Score: 51.6026 bits (122), Expect = 1.417e-8
Identity = 26/101 (25.74%), Postives = 47/101 (46.53%), Query Frame = 2 
Query:  221 GPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            GP + A  K+WH + F C  C   + N  F ++  + +C++ +N  +   C SC+Q I           K++H + F C+ C   + ++ F +      CE
Sbjct:    2 GPFVSAIGKSWHPDHFTCAGCGDSLQNQGFIEEGGKLYCEKDYNKFFAPHCESCKQPIVGPC--VQAIGKTFHPEHFTCSSCSKQIGSEGFNVDRGMPYCE 100
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Nematostella
Match: EDO41181 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S548])

HSP 1 Score: 71.2478 bits (173), Expect = 3.790e-15
Identity = 34/114 (29.82%), Postives = 53/114 (46.49%), Query Frame = 2 
Query:  188 RCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENH 529
            RC+ C   I     + A  +TWH E F C  C     +  FH+++ +PFC E +  ++  +C  C Q I +N  + +     +H +CF+C  C        FF  D +  CE H
Sbjct:   84 RCAYCNGPILDS-CVTALDQTWHPEHFVCAECGNPFGDTGFHERDGKPFCREDYYAMFAPRCGGCGQPIMDN--YISALSAHWHAECFICTECRQPFPGGSFFDHDGRPYCEMH 194

HSP 2 Score: 54.299 bits (129), Expect = 4.351e-9
Identity = 29/111 (26.13%), Postives = 53/111 (47.75%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            C+ C K I  G    A  KTWH E F C  C+  +   +F +++ +P+C+  ++  +  +C  C   I ++    T  ++++H + F+C  C     +  F  +D K  C 
Sbjct:   26 CAACNKPI-IGQVCTALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCERDYHDTFAPRCAYCNGPILDSC--VTALDQTWHPEHFVCAECGNPFGDTGFHERDGKPFCR 133

HSP 3 Score: 50.8322 bits (120), Expect = 6.340e-8
Identity = 30/111 (27.03%), Postives = 47/111 (42.34%), Query Frame = 2 
Query:  188 RCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVC 520
            RC  C + I     I A    WH ECF C  C++     SF   +  P+C+  ++      C+SC++ I       T   + +H + F+C  C   L    F  ++ K  C
Sbjct:  143 RCGGCGQPIMDN-YISALSAHWHAECFICTECRQPFPGGSFFDHDGRPYCEMHYHAKRGTLCYSCQKPITGRC--ITAMHRKFHPEHFVCAFCLKQLNKGTFKEQNDKPYC 250
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Medaka
Match: ldb3a (LIM domain-binding protein 3 [Source:NCBI gene;Acc:101165171])

HSP 1 Score: 87.8113 bits (216), Expect = 7.040e-20
Identity = 38/114 (33.33%), Postives = 59/114 (51.75%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C++C   I  G  + A ++TWH  CF C  C K   N  FH ++ EP+C++ +  L+  KC  C   +    +F      ++H  CF+C VCH +L    F+ K  K +C+ HA
Sbjct:  508 CARCNTKI-MGEVMHALRQTWHTTCFVCAACGKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFVCAVCHVNLEGHPFYSKKDKPLCKKHA 620

HSP 2 Score: 69.707 bits (169), Expect = 1.199e-13
Identity = 32/114 (28.07%), Postives = 53/114 (46.49%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C  C  +I  GP + A  ++WH E F C++C   + + SF ++ +  +C+ C+   +   C  C   I    E      +++H  CF+C  C     N  F M+D +  CE
Sbjct:  446 TPLCGACNSVIR-GPFLVALGRSWHPEEFNCHYCHVSLADVSFVEEQNNVYCENCYEEFFAPTCARCNTKIM--GEVMHALRQTWHTTCFVCAACGKPFGNSLFHMEDGEPYCE 556
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Medaka
Match: pdlim5b (PDZ and LIM domain protein 5 [Source:NCBI gene;Acc:101158216])

HSP 1 Score: 84.3445 bits (207), Expect = 9.555e-19
Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+ C++ I  G  I A K+TWH  CF C  C++ I +  FH ++ +P+C+  +NTL+   C  C   I    +F       +H  CF+C  C TSL  + FF K  KL+C+ HA
Sbjct:  329 CALCHQKI-LGEIINALKQTWHVSCFVCTACQQPIRSNVFHMEDGQPYCERDYNTLFNTTCHGCSFPIEAGDKFLEAVGHIWHDSCFVCVACCTSLEGQPFFSKKDKLLCKKHA 441

HSP 2 Score: 64.6994 bits (156), Expect = 5.244e-12
Identity = 34/114 (29.82%), Postives = 54/114 (47.37%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C KC  +I  GP + A   +WH E F C HC+  +    F ++ D+ +C  C+   +   C  C Q I    E     ++++H  CF+C  C   + +  F M+D +  CE
Sbjct:  267 TPMCCKCNNVIR-GPFLVAMGMSWHPEEFNCAHCRSSLAECGFVEEKDKVYCVHCYEQFFAPTCALCHQKIL--GEIINALKQTWHVSCFVCTACQQPIRSNVFHMEDGQPYCE 377
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Medaka
Match: pdlim5b (PDZ and LIM domain protein 5 [Source:NCBI gene;Acc:101158216])

HSP 1 Score: 83.1889 bits (204), Expect = 2.509e-18
Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+ C++ I  G  I A K+TWH  CF C  C++ I +  FH ++ +P+C+  +NTL+   C  C   I    +F       +H  CF+C  C TSL  + FF K  KL+C+ HA
Sbjct:  492 CALCHQKIL-GEIINALKQTWHVSCFVCTACQQPIRSNVFHMEDGQPYCERDYNTLFNTTCHGCSFPIEAGDKFLEAVGHIWHDSCFVCVACCTSLEGQPFFSKKDKLLCKKHA 604

HSP 2 Score: 63.5438 bits (153), Expect = 1.629e-11
Identity = 34/114 (29.82%), Postives = 54/114 (47.37%), Query Frame = 2 
Query:  182 TDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            T  C KC  +I  GP + A   +WH E F C HC+  +    F ++ D+ +C  C+   +   C  C Q I    E     ++++H  CF+C  C   + +  F M+D +  CE
Sbjct:  430 TPMCCKCNNVIR-GPFLVAMGMSWHPEEFNCAHCRSSLAECGFVEEKDKVYCVHCYEQFFAPTCALCHQKIL--GEIINALKQTWHVSCFVCTACQQPIRSNVFHMEDGQPYCE 540
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Medaka
Match: pdlim7 (PDZ and LIM domain 7 [Source:NCBI gene;Acc:101167302])

HSP 1 Score: 81.2629 bits (199), Expect = 1.168e-17
Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+KC K I +G  + A K T+H ECF+C  CK  I N +F+ +  EP+C++ +  ++  KC  C   I     F      S+H  CF+C +C  +L  K F+ K  K +C++HA
Sbjct:  315 CAKCKKKI-TGEIMHALKMTYHVECFKCAACKAPIRNQAFYMEEGEPYCEKDYEKMFGTKCHGCDFKIDAGDRFLEALGFSWHDTCFVCALCQINLEGKTFYSKKDKPLCKSHA 427

HSP 2 Score: 64.6994 bits (156), Expect = 5.151e-12
Identity = 34/116 (29.31%), Postives = 56/116 (48.28%), Query Frame = 2 
Query:  176 NMTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            N T  C  C K+I  G  + A  ++WH E F C+ CK  +    F ++    +C +C +  Y   C  C++ I    E     + +YH +CF C  C   + N+ F+M++ +  CE
Sbjct:  251 NRTPVCGACNKIIR-GRYLVALGRSWHPEEFTCSQCKAVLEEGGFFEERGAVYCTKCHDNRYAPNCAKCKKKI--TGEIMHALKMTYHVECFKCAACKAPIRNQAFYMEEGEPYCE 363
[Close]
BLAST of Four and a half LIM domains 5 vs. Ensembl Medaka
Match: pdlim7 (PDZ and LIM domain 7 [Source:NCBI gene;Acc:101167302])

HSP 1 Score: 81.2629 bits (199), Expect = 1.250e-17
Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+KC K I +G  + A K T+H ECF+C  CK  I N +F+ +  EP+C++ +  ++  KC  C   I     F      S+H  CF+C +C  +L  K F+ K  K +C++HA
Sbjct:  328 CAKCKKKI-TGEIMHALKMTYHVECFKCAACKAPIRNQAFYMEEGEPYCEKDYEKMFGTKCHGCDFKIDAGDRFLEALGFSWHDTCFVCALCQINLEGKTFYSKKDKPLCKSHA 440

HSP 2 Score: 64.6994 bits (156), Expect = 6.205e-12
Identity = 34/116 (29.31%), Postives = 56/116 (48.28%), Query Frame = 2 
Query:  176 NMTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCE 523
            N T  C  C K+I  G  + A  ++WH E F C+ CK  +    F ++    +C +C +  Y   C  C++ I    E     + +YH +CF C  C   + N+ F+M++ +  CE
Sbjct:  264 NRTPVCGACNKIIR-GRYLVALGRSWHPEEFTCSQCKAVLEEGGFFEERGAVYCTKCHDNRYAPNCAKCKKKI--TGEIMHALKMTYHVECFKCAACKAPIRNQAFYMEEGEPYCE 376
[Close]
BLAST of Four and a half LIM domains 5 vs. Planmine SMEST
Match: SMESG000036525.1 (SMESG000036525.1)

HSP 1 Score: 243.047 bits (619), Expect = 2.759e-83
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 2 
Query:  179 MTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHAK 535
            MTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHAK
Sbjct:    1 MTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHAK 119
[Close]
BLAST of Four and a half LIM domains 5 vs. Planmine SMEST
Match: SMESG000013182.1 (SMESG000013182.1)

HSP 1 Score: 105.916 bits (263), Expect = 2.762e-29
Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C+KC K   +GP + A  K WH  CF C +CK  +   SFH K+D P+C  CW  LYQ +C  C   I    ++ T ++ +YHK+CF C  C  +LA K+F ++D K +C  H 
Sbjct:    7 CAKCCKPFTAGPILSALDKKWHPSCFVCVNCKGELARSSFHVKDDSPYCVNCWKQLYQPRCTGCHTIIEPEEQYVTYNDNAYHKQCFTCASCKQTLAGKQFVIQDEKFLCPEHV 120
[Close]
BLAST of Four and a half LIM domains 5 vs. Planmine SMEST
Match: SMESG000067132.1 (SMESG000067132.1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.897e-21
Identity = 36/115 (31.30%), Postives = 61/115 (53.04%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHAK 535
            CSKC K +  G  + A  + WH  CF C  C+      SF++K+++P+C+ CW  ++Q KC  C   I  + ++     K+YH+ CF C  CH  +    F +++   +C +H +
Sbjct:    7 CSKCCKRLTIGQIVTALDRKWHPSCFTCVICQSEFQQKSFYEKDEDPYCEVCWKNIFQPKCNVCSCVIEASQKYVNYEGKNYHESCFTCARCHLPMIGISFTLENGDFICASHVQ 121
[Close]
BLAST of Four and a half LIM domains 5 vs. Planmine SMEST
Match: SMESG000029617.1 (SMESG000029617.1)

HSP 1 Score: 83.5741 bits (205), Expect = 4.867e-19
Identity = 44/119 (36.97%), Postives = 60/119 (50.42%), Query Frame = 2 
Query:  179 MTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDE-PFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            +   C KC+K I  G  + A    WH  CF+CN C+  + +  F   +D+ P+C+  WN L+Q KC  CR  I    +F      SYH KCF C+ C  SL  K F  ++ K  C  HA
Sbjct:  195 IAAHCEKCHKPI-VGNEVSAMDTKWHYGCFKCNRCEIPLGDQLFKVGDDQMPYCENDWNELFQVKCLKCRGPITILDKFIEIGTSSYHAKCFCCSACKMSLEGKPFHNRNGKPFCRVHA 312
[Close]
BLAST of Four and a half LIM domains 5 vs. Planmine SMEST
Match: SMESG000023063.1 (SMESG000023063.1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.531e-18
Identity = 41/115 (35.65%), Postives = 60/115 (52.17%), Query Frame = 2 
Query:  191 CSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNP-SFHQKNDEPFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSLANKKFFMKDSKLVCENHA 532
            C KC   I  G  + A  + WH ECF+C  C+K I+   +    N +P C  C+  L+  KC  C ++IA N ++       YH+ CF CN+C  SL +K F +K+ +  C  HA
Sbjct:    8 CCKCNNEINKGSIVTALSRKWHPECFKCFRCEKPISGQFNTPPGNTDPCCAACYKELFSPKCKKCGEAIA-NEKYVNYEADCYHQACFNCNICGDSLVDKPFILKEDQPACTKHA 121
The following BLAST results are available for this feature:
BLAST of Four and a half LIM domains 5 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
LDB36.882e-2234.21LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:... [more]
LDB36.882e-2234.21LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:... [more]
LDB31.423e-2134.21LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:... [more]
PDLIM53.900e-1836.84PDZ and LIM domain 5 [Source:HGNC Symbol;Acc:HGNC:... [more]
LDB31.423e-1734.21LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:... [more]
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BLAST of Four and a half LIM domains 5 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
alp-11.013e-2235.29ALP/Enigma encoding [Source:UniProtKB/TrEMBL;Acc:... [more]
alp-12.667e-2135.29ALP/Enigma encoding [Source:UniProtKB/TrEMBL;Acc:... [more]
alp-12.829e-2135.29ALP/Enigma encoding [Source:UniProtKB/TrEMBL;Acc:... [more]
alp-14.008e-1935.59ALP/Enigma encoding [Source:UniProtKB/TrEMBL;Acc:... [more]
lim-91.273e-1833.05LIM domain family [Source:UniProtKB/TrEMBL;Acc:G5... [more]
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BLAST of Four and a half LIM domains 5 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Lmpt3.320e-1933.05gene:FBgn0261565 transcript:FBtr0302777[more]
Lmpt3.320e-1933.05gene:FBgn0261565 transcript:FBtr0302776[more]
Lmpt3.320e-1933.05gene:FBgn0261565 transcript:FBtr0302784[more]
Zasp524.254e-1933.04gene:FBgn0265991 transcript:FBtr0100388[more]
Zasp524.371e-1933.04gene:FBgn0265991 transcript:FBtr0392901[more]
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BLAST of Four and a half LIM domains 5 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pdlim5a4.922e-1936.84PDZ and LIM domain 5a [Source:NCBI gene;Acc:436927... [more]
pdlim5a4.922e-1936.84PDZ and LIM domain 5a [Source:NCBI gene;Acc:436927... [more]
pdlim5b1.273e-1836.44PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-04... [more]
pdlim5b1.273e-1836.44PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-04... [more]
ldb3a5.554e-1833.33LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-04... [more]
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BLAST of Four and a half LIM domains 5 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
spryd34.902e-2133.33SPRY domain containing 3 [Source:Xenbase;Acc:XB-GE... [more]
spryd34.911e-2133.33SPRY domain containing 3 [Source:Xenbase;Acc:XB-GE... [more]
arhgef404.599e-1834.75Rho guanine nucleotide exchange factor 40 [Source:... [more]
arhgef405.231e-1834.75Rho guanine nucleotide exchange factor 40 [Source:... [more]
spryd36.224e-1833.33SPRY domain containing 3 [Source:Xenbase;Acc:XB-GE... [more]
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BLAST of Four and a half LIM domains 5 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Ldb38.895e-2235.09LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:13... [more]
Ldb39.755e-2235.09LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:13... [more]
Ldb32.976e-2135.09LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:13... [more]
Ldb33.631e-2135.09LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:13... [more]
Ldb36.624e-1835.09LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:13... [more]
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BLAST of Four and a half LIM domains 5 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q9JKS4|LDB3_MOUSE6.824e-2135.09LIM domain-binding protein 3 OS=Mus musculus OX=10... [more]
sp|O75112|LDB3_HUMAN6.833e-2134.21LIM domain-binding protein 3 OS=Homo sapiens OX=96... [more]
sp|A1ZA47|ZASP_DROME4.265e-1833.04PDZ and LIM domain protein Zasp OS=Drosophila mela... [more]
sp|Q679P3|PDLI7_CHICK8.488e-1835.96PDZ and LIM domain protein 7 OS=Gallus gallus OX=9... [more]
sp|Q6INU3|PDLI7_XENLA3.640e-1734.75PDZ and LIM domain protein 7 OS=Xenopus laevis OX=... [more]
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BLAST of Four and a half LIM domains 5 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A183A5D24.620e-2740.68Uncharacterized protein OS=Echinostoma caproni OX=... [more]
G4V9H05.129e-2741.88Putative four and A half lim domains OS=Schistosom... [more]
A0A430Q7415.129e-2741.88Uncharacterized protein OS=Schistosoma bovis OX=61... [more]
A0A504YT686.670e-2740.68Four and a half LIM domains protein 3 OS=Fasciola ... [more]
A0A2H1CS946.670e-2740.68Four and a half LIM domains protein 3 OS=Fasciola ... [more]
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BLAST of Four and a half LIM domains 5 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ldb3a1.371e-1833.33LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-04... [more]
pdlim75.946e-1835.96PDZ and LIM domain 7 [Source:NCBI gene;Acc:1030478... [more]
pdlim76.908e-1835.96PDZ and LIM domain 7 [Source:NCBI gene;Acc:1030478... [more]
pdlim77.257e-1835.96PDZ and LIM domain 7 [Source:NCBI gene;Acc:1030478... [more]
pdlim71.107e-1735.96PDZ and LIM domain 7 [Source:NCBI gene;Acc:1030478... [more]
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BLAST of Four and a half LIM domains 5 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSPMAT00000007081.12.389e-1935.09pep scaffold:Pmarinus_7.0:GL476780:360940:430661:-... [more]
fhl3b1.927e-1633.33four and a half LIM domains 3b [Source:ZFIN;Acc:ZD... [more]
PXN2.681e-1531.71paxillin [Source:HGNC Symbol;Acc:HGNC:9718][more]
PXN5.022e-1527.12paxillin [Source:HGNC Symbol;Acc:HGNC:9718][more]
fhl55.350e-1434.44four and a half LIM domains 5 [Source:ZFIN;Acc:ZDB... [more]
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BLAST of Four and a half LIM domains 5 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Four and a half LIM domains 5 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
LIMPET7.253e-1733.64Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO341918.964e-1736.17Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO411007.703e-1632.46Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
LDB31.659e-1530.70Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO411813.790e-1529.82Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Four and a half LIM domains 5 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ldb3a7.040e-2033.33LIM domain-binding protein 3 [Source:NCBI gene;Acc... [more]
pdlim5b9.555e-1936.84PDZ and LIM domain protein 5 [Source:NCBI gene;Acc... [more]
pdlim5b2.509e-1836.84PDZ and LIM domain protein 5 [Source:NCBI gene;Acc... [more]
pdlim71.168e-1735.96PDZ and LIM domain 7 [Source:NCBI gene;Acc:1011673... [more]
pdlim71.250e-1735.96PDZ and LIM domain 7 [Source:NCBI gene;Acc:1011673... [more]
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BLAST of Four and a half LIM domains 5 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000036525.12.759e-83100.00SMESG000036525.1[more]
SMESG000013182.12.762e-2940.35SMESG000013182.1[more]
SMESG000067132.11.897e-2131.30SMESG000067132.1[more]
SMESG000029617.14.867e-1936.97SMESG000029617.1[more]
SMESG000023063.11.531e-1835.65SMESG000023063.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30019884 ID=SMED30019884|Name=Four and a half LIM domains 5|organism=Schmidtea mediterranea sexual|type=transcript|length=638bp
AGACACGATAAATTTCGCAATCTTGCTTGCATGTATGCTAAAAAATCTGT
TGGATCTGGATAGCATCGCGATGTGCGATTAACTCGCTGTTGGTATTTAT
GTGCCAGATTTGTCTATAAATCATTTTGTTTATTTGCTGGTTGATAGACG
AACTAATTAGGAATATTAAATTTTCAATATGACTGACAGATGCTCGAAGT
GCTATAAACTGATTGAATCTGGACCTGCGATAGAAGCGTTCAAAAAAACC
TGGCACCAAGAGTGCTTTCAATGCAACCATTGCAAAAAACGAATTACCAA
TCCTTCGTTTCACCAGAAAAACGACGAACCTTTCTGTGATGAATGCTGGA
ACACCCTTTATCAAAAGAAATGCTTTAGTTGTCGACAATCTATTGCAGAG
AACACAGAATTCTTTACGACTTCTGAGAAGAGCTATCACAAGAAATGCTT
TTTATGCAATGTTTGCCATACCTCATTAGCAAACAAGAAGTTTTTTATGA
AAGATAGCAAATTAGTTTGTGAAAATCATGCAAAATAGAATATTAAATTC
TGAGATGAACCTAATTTTGCTTGCAGCTTTTTAGAACATTATTTTTTTTG
ACCATCTGCAAATATATTTGAATGGCTTTTAAAAAAAA
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protein sequence of SMED30019884-orf-1

>SMED30019884-orf-1 ID=SMED30019884-orf-1|Name=SMED30019884-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=120bp
MTDRCSKCYKLIESGPAIEAFKKTWHQECFQCNHCKKRITNPSFHQKNDE
PFCDECWNTLYQKKCFSCRQSIAENTEFFTTSEKSYHKKCFLCNVCHTSL
ANKKFFMKDSKLVCENHAK*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0003713transcription coactivator activity
GO:0008270zinc ion binding
GO:0046872metal ion binding
Vocabulary: biological process
TermDefinition
GO:0045944positive regulation of transcription from RNA polymerase II promoter
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000101muscle cell
PLANA:0000140anterior region of the whole animal
Vocabulary: INTERPRO
TermDefinition
IPR016694UCP017292
IPR037987FHL2/3/5
IPR001781Znf_LIM
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001781Zinc finger, LIM-typeSMARTSM00132lim_4coord: 4..56
e-value: 4.4E-13
score: 59.5
coord: 64..117
e-value: 7.4E-14
score: 62.0
IPR001781Zinc finger, LIM-typePFAMPF00412LIMcoord: 65..117
e-value: 2.9E-12
score: 46.6
coord: 5..58
e-value: 2.8E-11
score: 43.5
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 5..39
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 65..100
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 64..119
score: 10.078
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 3..63
score: 13.335
IPR016694Protein of unknown function UCP017292, zinc finger, CHY-typePIRSFPIRSF017292UCP017292_zncoord: 58..119
e-value: 0.0042
score: 15.2
coord: 2..64
e-value: 0.039
score: 12.1
NoneNo IPR availableGENE3DG3DSA:2.10.110.10coord: 1..58
e-value: 2.3E-15
score: 58.3
NoneNo IPR availableGENE3DG3DSA:2.10.110.10coord: 59..119
e-value: 1.5E-15
score: 58.9
NoneNo IPR availablePANTHERPTHR24205:SF4LIM DOMAIN FAMILYcoord: 3..118
NoneNo IPR availableCDDcd08368LIMcoord: 5..57
e-value: 1.61704E-9
score: 48.0827
NoneNo IPR availableCDDcd08368LIMcoord: 65..118
e-value: 2.62063E-7
score: 42.3047
NoneNo IPR availableSUPERFAMILYSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 31..96
NoneNo IPR availableSUPERFAMILYSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 3..30
IPR037987Four and a half LIM domains protein 2/3/5PANTHERPTHR24205FAMILY NOT NAMEDcoord: 3..118