CCHC-type domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30019878 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of CCHC-type domain-containing protein vs. Ensembl Human
Match: SF1 (splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:12950]) HSP 1 Score: 268.47 bits (685), Expect = 3.818e-84 Identity = 146/324 (45.06%), Postives = 203/324 (62.65%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLG 1094 SKK ++SRW+ + + K VI GMPT IPP + + YI+QLQI D+T KL+ + R PSP+PIY +GKR+NT+E+R R++LE+ + L+ ++ L PD P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE N KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA ++I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK Q P + P + + +D EY S M ELG +PA +G Sbjct: 14 SKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKF-QRPGD--PQSAQDKARMDKEYLSLMAELGE----APVPASVG 330
BLAST of CCHC-type domain-containing protein vs. Ensembl Human
Match: SF1 (splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:12950]) HSP 1 Score: 267.314 bits (682), Expect = 1.782e-83 Identity = 146/324 (45.06%), Postives = 203/324 (62.65%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLG 1094 SKK ++SRW+ + + K VI GMPT IPP + + YI+QLQI D+T KL+ + R PSP+PIY +GKR+NT+E+R R++LE+ + L+ ++ L PD P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE N KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA ++I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK Q P + P + + +D EY S M ELG +PA +G Sbjct: 14 SKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKF-QRPGD--PQSAQDKARMDKEYLSLMAELGE----APVPASVG 330
BLAST of CCHC-type domain-containing protein vs. Ensembl Human
Match: SF1 (splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:12950]) HSP 1 Score: 268.085 bits (684), Expect = 4.615e-83 Identity = 146/324 (45.06%), Postives = 203/324 (62.65%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLG 1094 SKK ++SRW+ + + K VI GMPT IPP + + YI+QLQI D+T KL+ + R PSP+PIY +GKR+NT+E+R R++LE+ + L+ ++ L PD P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE N KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA ++I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK Q P + P + + +D EY S M ELG +PA +G Sbjct: 14 SKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKF-QRPGD--PQSAQDKARMDKEYLSLMAELGE----APVPASVG 330
BLAST of CCHC-type domain-containing protein vs. Ensembl Human
Match: SF1 (splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:12950]) HSP 1 Score: 268.085 bits (684), Expect = 4.821e-83 Identity = 146/324 (45.06%), Postives = 203/324 (62.65%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLG 1094 SKK ++SRW+ + + K VI GMPT IPP + + YI+QLQI D+T KL+ + R PSP+PIY +GKR+NT+E+R R++LE+ + L+ ++ L PD P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE N KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA ++I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK Q P + P + + +D EY S M ELG +PA +G Sbjct: 14 SKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKF-QRPGD--PQSAQDKARMDKEYLSLMAELGE----APVPASVG 330
BLAST of CCHC-type domain-containing protein vs. Ensembl Human
Match: SF1 (splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:12950]) HSP 1 Score: 268.47 bits (685), Expect = 7.857e-83 Identity = 146/324 (45.06%), Postives = 203/324 (62.65%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLG 1094 SKK ++SRW+ + + K VI GMPT IPP + + YI+QLQI D+T KL+ + R PSP+PIY +GKR+NT+E+R R++LE+ + L+ ++ L PD P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE N KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA ++I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK Q P + P + + +D EY S M ELG +PA +G Sbjct: 139 SKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKF-QRPGD--PQSAQDKARMDKEYLSLMAELGE----APVPASVG 455
BLAST of CCHC-type domain-containing protein vs. Ensembl Celegans
Match: sfa-1 (SF1 protein; Splicing FActor [Source:UniProtKB/TrEMBL;Acc:G5EF97]) HSP 1 Score: 229.565 bits (584), Expect = 2.615e-68 Identity = 129/320 (40.31%), Postives = 185/320 (57.81%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTDKIGG--RFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLG------EAQSC-----VTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELG 1055 +KK R+SRWST K + GMPT +P ++ Y++QL+I D T KL+ ++ E R PSP+P+Y +GKR+NT+E R R+ LE + + + L + P+ P D R +KV+IPQ+ +PD+N +GL+IGPRG TLK LE E KIIIRGKGSI GK+ P+PGE+E LHAY+T ++KA ++I ++I E P+ N+LRK Q+++LA+LNGT+R D N + ++ C VTN I C+ CG GH+ +DCK NP + +D EY + M ELG Sbjct: 186 AKKERRSRWSTT---KSFVPGMPTILPADLTEDQRNAYLLQLEIEDATRKLRLADF-GVAEGRERSPSPEPVYDANGKRLNTREVRKRQELEQLRHEKIQALLKINPNFKPPADYRAPNIRLHDKVWIPQEQFPDLNFVGLLIGPRGNTLKSLEAETGAKIIIRGKGSIKEGKLTNRLGPMPGENEPLHAYVTGTDMNVIKKACEKIKQVIAEATALPD-NNELRKLQLRELALLNGTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCK---NPKGM----YASEAGMDDEYSALMAELG 493
BLAST of CCHC-type domain-containing protein vs. Ensembl Celegans
Match: asd-2 (RNA-binding protein asd-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EFF1]) HSP 1 Score: 89.7373 bits (221), Expect = 9.339e-20 Identity = 49/125 (39.20%), Postives = 77/125 (61.60%), Query Frame = 3 Query: 498 EKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGED---ECLHAYIT-----SFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYR 848 EKVF+P ++PD N +G I+GPRG+T K LE+E KI++RG+GS+ + K N P + E LH I + +K + +A + + K++ + PE E+DL++ Q+ +LAI+NGTYR Sbjct: 90 EKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEELNRGKPNWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLL---VPAPEGEDDLKRKQLMELAIINGTYR 211
BLAST of CCHC-type domain-containing protein vs. Ensembl Celegans
Match: asd-2 (RNA-binding protein asd-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EFF1]) HSP 1 Score: 89.7373 bits (221), Expect = 2.196e-19 Identity = 49/125 (39.20%), Postives = 77/125 (61.60%), Query Frame = 3 Query: 498 EKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGED---ECLHAYIT-----SFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYR 848 EKVF+P ++PD N +G I+GPRG+T K LE+E KI++RG+GS+ + K N P + E LH I + +K + +A + + K++ + PE E+DL++ Q+ +LAI+NGTYR Sbjct: 90 EKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEELNRGKPNWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLL---VPAPEGEDDLKRKQLMELAIINGTYR 211
BLAST of CCHC-type domain-containing protein vs. Ensembl Celegans
Match: asd-2 (RNA-binding protein asd-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EFF1]) HSP 1 Score: 89.7373 bits (221), Expect = 3.044e-19 Identity = 49/125 (39.20%), Postives = 77/125 (61.60%), Query Frame = 3 Query: 498 EKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGED---ECLHAYIT-----SFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYR 848 EKVF+P ++PD N +G I+GPRG+T K LE+E KI++RG+GS+ + K N P + E LH I + +K + +A + + K++ + PE E+DL++ Q+ +LAI+NGTYR Sbjct: 162 EKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEELNRGKPNWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLL---VPAPEGEDDLKRKQLMELAIINGTYR 283
BLAST of CCHC-type domain-containing protein vs. Ensembl Celegans
Match: gld-1 (Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]) HSP 1 Score: 89.3521 bits (220), Expect = 3.384e-19 Identity = 49/141 (34.75%), Postives = 84/141 (59.57%), Query Frame = 3 Query: 498 EKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSI--------HNGKVNVNNVPLPGEDECLHAYITSFSKEC-----VEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKML 881 EK+++P+++YPD N +G I+GPRG+T K LE++ KI++RGKGS+ H GK N ++ ED+ LH + E ++ A +++ K++ I PE ++L++ Q+ +LAI+NGTYR N +++ Sbjct: 207 EKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRGKANWEHL----EDD-LHVLVQCEDTENRVHIKLQAALEQVKKLL---IPAPEGTDELKRKQLMELAIINGTYRPMKSPNPARVM 339
BLAST of CCHC-type domain-containing protein vs. Ensembl Fly
Match: SF1 (gene:FBgn0025571 transcript:FBtr0083456) HSP 1 Score: 279.256 bits (713), Expect = 2.526e-86 Identity = 148/322 (45.96%), Postives = 205/322 (63.66%), Query Frame = 3 Query: 138 KKNRKSRWSTNEFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTDKIG--GRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNV-NNVPLPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETD-------GLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQS-SPLDGEYKSFMNELGSEGRP 1070 K+ RKSRW +E DK I GMPT +P ++P E Y++Q QI +I+ KL+ + R PSP+PIY DGKR+NT+E+R R+RLE+++ QL++K+ T+ P+ P D R +KV IPQ+ +PDIN +GL+IGPRG TLK +EK+ KIIIRGKGS+ GKV + PLPGEDE LHA+IT+ + E V KA D+I +I++GI+ PE NDLR+ Q+++LA LNGT RE D + + +TNTI+C+ CGGTGHL +DC+ + + P + S + +D EY S M ELG EG P Sbjct: 271 KRKRKSRWGGSENDKTFIPGMPTILPSTLDPAQQEAYLVQFQIEEISRKLRTGDLGITQNPEERSPSPEPIYSSDGKRLNTREFRYRKRLEEQRHQLIVKMQTVNPEFKPPADYKPPVTRVSDKVLIPQEQHPDINFVGLLIGPRGNTLKAMEKDTGAKIIIRGKGSVKEGKVGRKDGQPLPGEDEPLHAFITAPNPEAVRKAVDKIKDVIRQGIEVPEGHNDLRRMQLRELAQLNGTLRENDIQRCTCGSTDHKSWQCPDKPIITNTIVCTSCGGTGHLTKDCRNKRPGSGVPGMACEDSQAKIDEEYMSLMAELG-EGPP 591
BLAST of CCHC-type domain-containing protein vs. Ensembl Fly
Match: how (gene:FBgn0264491 transcript:FBtr0084178) HSP 1 Score: 87.8113 bits (216), Expect = 1.024e-18 Identity = 50/126 (39.68%), Postives = 76/126 (60.32%), Query Frame = 3 Query: 498 EKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGEDEC---LHAYITSFSKECVEKATDRINKIIQEG----IDFPELENDLRKNQMKQLAILNGTYRET 854 EKV++P ++PD N +G I+GPRG+T K LE+E KI++RGKGS+ + K N P + LH IT E +AT ++ + + E + E E++L+K Q+ +LAI+NGTYR+T Sbjct: 139 EKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTE--NRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDT 262
BLAST of CCHC-type domain-containing protein vs. Ensembl Fly
Match: how (gene:FBgn0264491 transcript:FBtr0100514) HSP 1 Score: 87.8113 bits (216), Expect = 1.089e-18 Identity = 50/126 (39.68%), Postives = 76/126 (60.32%), Query Frame = 3 Query: 498 EKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGEDEC---LHAYITSFSKECVEKATDRINKIIQEG----IDFPELENDLRKNQMKQLAILNGTYRET 854 EKV++P ++PD N +G I+GPRG+T K LE+E KI++RGKGS+ + K N P + LH IT E +AT ++ + + E + E E++L+K Q+ +LAI+NGTYR+T Sbjct: 139 EKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTE--NRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDT 262
BLAST of CCHC-type domain-containing protein vs. Ensembl Fly
Match: how (gene:FBgn0264491 transcript:FBtr0301402) HSP 1 Score: 87.8113 bits (216), Expect = 1.119e-18 Identity = 50/126 (39.68%), Postives = 76/126 (60.32%), Query Frame = 3 Query: 498 EKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGEDEC---LHAYITSFSKECVEKATDRINKIIQEG----IDFPELENDLRKNQMKQLAILNGTYRET 854 EKV++P ++PD N +G I+GPRG+T K LE+E KI++RGKGS+ + K N P + LH IT E +AT ++ + + E + E E++L+K Q+ +LAI+NGTYR+T Sbjct: 139 EKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTE--NRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDT 262
BLAST of CCHC-type domain-containing protein vs. Ensembl Fly
Match: how (gene:FBgn0264491 transcript:FBtr0335195) HSP 1 Score: 87.8113 bits (216), Expect = 1.130e-18 Identity = 50/126 (39.68%), Postives = 76/126 (60.32%), Query Frame = 3 Query: 498 EKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGEDEC---LHAYITSFSKECVEKATDRINKIIQEG----IDFPELENDLRKNQMKQLAILNGTYRET 854 EKV++P ++PD N +G I+GPRG+T K LE+E KI++RGKGS+ + K N P + LH IT E +AT ++ + + E + E E++L+K Q+ +LAI+NGTYR+T Sbjct: 139 EKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTE--NRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDT 262
BLAST of CCHC-type domain-containing protein vs. Ensembl Zebrafish
Match: sf1 (splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]) HSP 1 Score: 264.618 bits (675), Expect = 1.123e-82 Identity = 148/324 (45.68%), Postives = 204/324 (62.96%), Query Frame = 3 Query: 138 KKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQS----CVTNTIICSLCGGTGHLPRDCKVNQN----PAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPT 1073 KK ++SRWS+ D K VI GMPT IPP + YI+QLQI D+T KL+ + + R PSP+PIY +GKR+NT+EYR R++LE+ + L+ ++ L P+ P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA ++I I+++GI+ PE +NDLRK Q+++LA LNGT RE D ++L QS +TNT +C+ CGG GH+ DCK + P E PP + + +D EY S M ELG P+ Sbjct: 15 KKRKRSRWSSETPDQKTVIPGMPTVIPPGLTRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKKLEEERHSLITEMVGLNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDN----RILRPWQSTEPRSITNTTLCTKCGGAGHISSDCKFTSSFAPRPGE-PPQSAQDKARMDKEYLSLMAELGEAPVPS 333
BLAST of CCHC-type domain-containing protein vs. Ensembl Zebrafish
Match: sf1 (splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]) HSP 1 Score: 265.003 bits (676), Expect = 9.605e-82 Identity = 148/324 (45.68%), Postives = 204/324 (62.96%), Query Frame = 3 Query: 138 KKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQS----CVTNTIICSLCGGTGHLPRDCKVNQN----PAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPT 1073 KK ++SRWS+ D K VI GMPT IPP + YI+QLQI D+T KL+ + + R PSP+PIY +GKR+NT+EYR R++LE+ + L+ ++ L P+ P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA ++I I+++GI+ PE +NDLRK Q+++LA LNGT RE D ++L QS +TNT +C+ CGG GH+ DCK + P E PP + + +D EY S M ELG P+ Sbjct: 87 KKRKRSRWSSETPDQKTVIPGMPTVIPPGLTRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKKLEEERHSLITEMVGLNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDN----RILRPWQSTEPRSITNTTLCTKCGGAGHISSDCKFTSSFAPRPGE-PPQSAQDKARMDKEYLSLMAELGEAPVPS 405
BLAST of CCHC-type domain-containing protein vs. Ensembl Zebrafish
Match: qkib (QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54]) HSP 1 Score: 95.5153 bits (236), Expect = 1.848e-21 Identity = 52/126 (41.27%), Postives = 76/126 (60.32%), Query Frame = 3 Query: 489 RFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGED---ECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETD 857 + +EK+++P +YPD N +G I+GPRGLT K LE E KI++RGKGS+ + K N P + E LH IT VE A +R ++ ++ E E+ L+K Q+ +LAILNGTYR+ + Sbjct: 81 QLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLIT------VEDAQNRAEIKLKRAVEEAEGEDSLKKMQLMELAILNGTYRDAN 200
BLAST of CCHC-type domain-containing protein vs. Ensembl Zebrafish
Match: qkib (QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54]) HSP 1 Score: 95.1301 bits (235), Expect = 1.877e-21 Identity = 52/126 (41.27%), Postives = 76/126 (60.32%), Query Frame = 3 Query: 489 RFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGED---ECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETD 857 + +EK+++P +YPD N +G I+GPRGLT K LE E KI++RGKGS+ + K N P + E LH IT VE A +R ++ ++ E E+ L+K Q+ +LAILNGTYR+ + Sbjct: 81 QLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLIT------VEDAQNRAEIKLKRAVEEAEGEDSLKKMQLMELAILNGTYRDAN 200
BLAST of CCHC-type domain-containing protein vs. Ensembl Zebrafish
Match: qkib (QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54]) HSP 1 Score: 93.9745 bits (232), Expect = 6.221e-21 Identity = 52/131 (39.69%), Postives = 80/131 (61.07%), Query Frame = 3 Query: 489 RFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGED---ECLHAYITSFSKECVEKATDRINKIIQEGI-----DFPELENDLRKNQMKQLAILNGTYRETD 857 + +EK+++P +YPD N +G I+GPRGLT K LE E KI++RGKGS+ + K N P + E LH IT ++ +A ++ + ++E + DF E E+ L+K Q+ +LAILNGTYR+ + Sbjct: 81 QLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLIT--VEDAQNRAEIKLKRAVEEVLVIFLRDFAEGEDSLKKMQLMELAILNGTYRDAN 209
BLAST of CCHC-type domain-containing protein vs. Ensembl Xenopus
Match: men1 (menin 1 [Source:NCBI gene;Acc:549115]) HSP 1 Score: 266.159 bits (679), Expect = 1.855e-83 Identity = 146/327 (44.65%), Postives = 200/327 (61.16%), Query Frame = 3 Query: 120 SEFTISKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCK---VNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVL 1079 S + K ++SRW+ D K +I GMPT IPP + + YI+QLQI D+T KL+ + R PSP+PIY +GKR+NT+E+R R++LE+ + L+ ++ L PD P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE N KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA D+I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK V P E P + + +D EY S M ELG PT + Sbjct: 13 SASALKWKRKRSRWNDETPDQKTIIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVGLNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVDQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFTSVTVRPGE--PQSAQDKARMDKEYLSLMAELGEAPVPTPM 337
BLAST of CCHC-type domain-containing protein vs. Ensembl Xenopus
Match: men1 (menin 1 [Source:NCBI gene;Acc:549115]) HSP 1 Score: 266.159 bits (679), Expect = 1.480e-82 Identity = 146/323 (45.20%), Postives = 200/323 (61.92%), Query Frame = 3 Query: 132 ISKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCK---VNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVL 1079 S+K ++SRW+ D K +I GMPT IPP + + YI+QLQI D+T KL+ + R PSP+PIY +GKR+NT+E+R R++LE+ + L+ ++ L PD P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE N KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA D+I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK V P E P + + +D EY S M ELG PT + Sbjct: 47 FSRKRKRSRWNDETPDQKTIIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVGLNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVDQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFTSVTVRPGE--PQSAQDKARMDKEYLSLMAELGEAPVPTPM 367
BLAST of CCHC-type domain-containing protein vs. Ensembl Xenopus
Match: men1 (menin 1 [Source:NCBI gene;Acc:549115]) HSP 1 Score: 266.159 bits (679), Expect = 2.516e-82 Identity = 146/323 (45.20%), Postives = 200/323 (61.92%), Query Frame = 3 Query: 132 ISKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCK---VNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVL 1079 S+K ++SRW+ D K +I GMPT IPP + + YI+QLQI D+T KL+ + R PSP+PIY +GKR+NT+E+R R++LE+ + L+ ++ L PD P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE N KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA D+I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK V P E P + + +D EY S M ELG PT + Sbjct: 74 FSRKRKRSRWNDETPDQKTIIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVGLNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVDQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFTSVTVRPGE--PQSAQDKARMDKEYLSLMAELGEAPVPTPM 394
BLAST of CCHC-type domain-containing protein vs. Ensembl Xenopus
Match: spsb3 (splA/ryanodine receptor domain and SOCS box containing 3 [Source:Xenbase;Acc:XB-GENE-971062]) HSP 1 Score: 90.1225 bits (222), Expect = 1.484e-19 Identity = 50/131 (38.17%), Postives = 78/131 (59.54%), Query Frame = 3 Query: 489 RFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGED---ECLHAYITSFSKEC-----VEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETD 857 + +EK+++P +YPD N +G I+GPRGLT K LE E KI++RGKGS+ + K N P + E LH IT + +++A + + K++ + E E+ L+K Q+ +LAILNGTYR+ + Sbjct: 82 QLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDAN 209
BLAST of CCHC-type domain-containing protein vs. Ensembl Xenopus
Match: spsb3 (splA/ryanodine receptor domain and SOCS box containing 3 [Source:Xenbase;Acc:XB-GENE-971062]) HSP 1 Score: 86.2705 bits (212), Expect = 5.405e-18 Identity = 52/146 (35.62%), Postives = 81/146 (55.48%), Query Frame = 3 Query: 489 RFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNV------PLPGED------------ECLHAYITSFSKEC-----VEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETD 857 + +EK+++P +YPD N +G I+GPRGLT K LE E KI++RGKGS+ + K V N+ L E+ E LH IT + +++A + + K++ + E E+ L+K Q+ +LAILNGTYR+ + Sbjct: 106 QLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKAVTNILECSILALNKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDAN 248
BLAST of CCHC-type domain-containing protein vs. Ensembl Mouse
Match: Sf1 (splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]) HSP 1 Score: 268.085 bits (684), Expect = 4.193e-84 Identity = 146/324 (45.06%), Postives = 203/324 (62.65%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLG 1094 SKK ++SRW+ + + K VI GMPT IPP + + YI+QLQI D+T KL+ + R PSP+PIY +GKR+NT+E+R R++LE+ + L+ ++ L PD P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE N KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA ++I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK Q P + P + + +D EY S M ELG +PA +G Sbjct: 14 SKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHTLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKF-QRPGD--PQSAQDKARMDKEYLSLMAELGE----APVPASVG 330
BLAST of CCHC-type domain-containing protein vs. Ensembl Mouse
Match: Sf1 (splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]) HSP 1 Score: 268.085 bits (684), Expect = 4.193e-84 Identity = 146/324 (45.06%), Postives = 203/324 (62.65%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLG 1094 SKK ++SRW+ + + K VI GMPT IPP + + YI+QLQI D+T KL+ + R PSP+PIY +GKR+NT+E+R R++LE+ + L+ ++ L PD P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE N KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA ++I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK Q P + P + + +D EY S M ELG +PA +G Sbjct: 14 SKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHTLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKF-QRPGD--PQSAQDKARMDKEYLSLMAELGE----APVPASVG 330
BLAST of CCHC-type domain-containing protein vs. Ensembl Mouse
Match: Sf1 (splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]) HSP 1 Score: 267.7 bits (683), Expect = 1.088e-83 Identity = 146/324 (45.06%), Postives = 203/324 (62.65%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLG 1094 SKK ++SRW+ + + K VI GMPT IPP + + YI+QLQI D+T KL+ + R PSP+PIY +GKR+NT+E+R R++LE+ + L+ ++ L PD P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE N KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA ++I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK Q P + P + + +D EY S M ELG +PA +G Sbjct: 14 SKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHTLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKF-QRPGD--PQSAQDKARMDKEYLSLMAELGE----APVPASVG 330
BLAST of CCHC-type domain-containing protein vs. Ensembl Mouse
Match: Sf1 (splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]) HSP 1 Score: 267.7 bits (683), Expect = 1.088e-83 Identity = 146/324 (45.06%), Postives = 203/324 (62.65%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLG 1094 SKK ++SRW+ + + K VI GMPT IPP + + YI+QLQI D+T KL+ + R PSP+PIY +GKR+NT+E+R R++LE+ + L+ ++ L PD P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE N KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA ++I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK Q P + P + + +D EY S M ELG +PA +G Sbjct: 14 SKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHTLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKF-QRPGD--PQSAQDKARMDKEYLSLMAELGE----APVPASVG 330
BLAST of CCHC-type domain-containing protein vs. Ensembl Mouse
Match: Sf1 (splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]) HSP 1 Score: 268.085 bits (684), Expect = 3.798e-83 Identity = 146/324 (45.06%), Postives = 203/324 (62.65%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLG 1094 SKK ++SRW+ + + K VI GMPT IPP + + YI+QLQI D+T KL+ + R PSP+PIY +GKR+NT+E+R R++LE+ + L+ ++ L PD P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE N KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA ++I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK Q P + P + + +D EY S M ELG +PA +G Sbjct: 14 SKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHTLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKF-QRPGD--PQSAQDKARMDKEYLSLMAELGE----APVPASVG 330
BLAST of CCHC-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q15637|SF01_HUMAN (Splicing factor 1 OS=Homo sapiens OX=9606 GN=SF1 PE=1 SV=4) HSP 1 Score: 268.085 bits (684), Expect = 2.315e-82 Identity = 146/324 (45.06%), Postives = 203/324 (62.65%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLG 1094 SKK ++SRW+ + + K VI GMPT IPP + + YI+QLQI D+T KL+ + R PSP+PIY +GKR+NT+E+R R++LE+ + L+ ++ L PD P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE N KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA ++I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK Q P + P + + +D EY S M ELG +PA +G Sbjct: 14 SKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKF-QRPGD--PQSAQDKARMDKEYLSLMAELGE----APVPASVG 330
BLAST of CCHC-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q64213|SF01_MOUSE (Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=6) HSP 1 Score: 266.929 bits (681), Expect = 1.011e-81 Identity = 146/324 (45.06%), Postives = 203/324 (62.65%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLG 1094 SKK ++SRW+ + + K VI GMPT IPP + + YI+QLQI D+T KL+ + R PSP+PIY +GKR+NT+E+R R++LE+ + L+ ++ L PD P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE N KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA ++I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK Q P + P + + +D EY S M ELG +PA +G Sbjct: 14 SKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHTLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKF-QRPGD--PQSAQDKARMDKEYLSLMAELGE----APVPASVG 330
BLAST of CCHC-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q8NIW7|BBP_NEUCR (Branchpoint-bridging protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=bbp-1 PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 5.732e-57 Identity = 129/358 (36.03%), Postives = 186/358 (51.96%), Query Frame = 3 Query: 111 PTHSEFTISKKNRKSRWSTNEFDKCV-IAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD-KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYR--ETDGLNKLKMLG-------EAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEF---------PPLNIPQSS---PLDGEYKSFMNELGSEG-RPTVLPAYLGFLPEFP 1112 P SE ++ +++RW +K + G+PT I NM + E Y + L+I +IT KL+ + R PSP P Y G+R+NT+EYR R++LED + +L+ K P+ P +D + + +EKV++P +DYP+IN IGL+IGPRG TLK +E E KI IRGKGS+ GK + ++E LH I + ++E V KA I+ II+ PE +N+L++NQ+++LA LNGT R E +G E Q+ N IIC +CG GH+ RDC Q A + I S +D EY+ M ELG G P + A G P Sbjct: 69 PERSEDGPKRRKKRNRWGEATENKAAGLMGLPTAIVANMTSEQLEAYTLHLRIEEITQKLKIDDVVPA--DGDRSPSPAPQYDNHGRRVNTREYRYRKKLEDERHKLIEKAMKTIPNYHPPSDYRRPTKTQEKVYVPVNDYPEINFIGLLIGPRGNTLKKMETESGAKIAIRGKGSVKEGKGRSDAAHSSNQEEDLHCLIMADTEEKVNKAKKLIHNIIETAASIPEGQNELKRNQLRELAALNGTLRDDENQACQNCGQIGHRKYDCPEKQNYTAN-IICRVCGNAGHMARDCPDRQRGASWRNDGPGAGRTAGRIGSSGGGDAVDREYEQLMQELGGTGAAPARIEAGPGSFSNGP 423
BLAST of CCHC-type domain-containing protein vs. UniProt/SwissProt
Match: sp|P0CO44|BBP_CRYNJ (Branchpoint-bridging protein OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=BBP PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 5.786e-56 Identity = 119/326 (36.50%), Postives = 180/326 (55.21%), Query Frame = 3 Query: 141 KNRKSRWSTNEFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEI--EAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD---KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKL-KMLGE---------AQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPT 1073 + R+SRW + K + GMP + N++ + + Y I +++ +I KL+ T ++ R PSP P Y G+R NT+E R R++LED + +L+ + P+ P D K G R ++KV+IP ++P+IN GL++GPRG +LK +E+E KI IRGKGS+ GK N P EDE LH IT+ + V+ INK+I+ PE END ++NQ+++LA LNGT R+ + N+L + GE Q + +IC +CGG GH+ RDC+ +P+ L + + D EY + M ELG G T Sbjct: 129 RKRRSRWG-DASAKVNVPGMPVAVMGNVSQTELDNYAIHVRLEEINRKLR----TGDVVPPEGQRSPSPTPQYDAYGRRTNTRELRYRKKLEDERTRLIDRAVKSDPNFRPPVDFQHKRGSRPQDKVYIPVKEFPEINFFGLLVGPRGNSLKKMERESGAKISIRGKGSVKEGKGRAGNFPQDEEDE-LHCLITADDESKVKTCVALINKVIETAASTPEGENDHKRNQLRELASLNGTLRDDE--NQLCQNCGEKGHRRWECPQQRVYSANVICRICGGAGHMARDCRGRGDPS----LTQNKQTAFDSEYTALMAELGEGGGST 442
BLAST of CCHC-type domain-containing protein vs. UniProt/SwissProt
Match: sp|P0CO45|BBP_CRYNB (Branchpoint-bridging protein OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=BBP PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 5.786e-56 Identity = 119/326 (36.50%), Postives = 180/326 (55.21%), Query Frame = 3 Query: 141 KNRKSRWSTNEFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEI--EAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD---KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKL-KMLGE---------AQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPT 1073 + R+SRW + K + GMP + N++ + + Y I +++ +I KL+ T ++ R PSP P Y G+R NT+E R R++LED + +L+ + P+ P D K G R ++KV+IP ++P+IN GL++GPRG +LK +E+E KI IRGKGS+ GK N P EDE LH IT+ + V+ INK+I+ PE END ++NQ+++LA LNGT R+ + N+L + GE Q + +IC +CGG GH+ RDC+ +P+ L + + D EY + M ELG G T Sbjct: 129 RKRRSRWG-DASAKVNVPGMPVAVMGNVSQTELDNYAIHVRLEEINRKLR----TGDVVPPEGQRSPSPTPQYDAYGRRTNTRELRYRKKLEDERTRLIDRAVKSDPNFRPPVDFQHKRGSRPQDKVYIPVKEFPEINFFGLLVGPRGNSLKKMERESGAKISIRGKGSVKEGKGRAGNFPQDEEDE-LHCLITADDESKVKTCVALINKVIETAASTPEGENDHKRNQLRELASLNGTLRDDE--NQLCQNCGEKGHRRWECPQQRVYSANVICRICGGAGHMARDCRGRGDPS----LTQNKQTAFDSEYTALMAELGEGGGST 442
BLAST of CCHC-type domain-containing protein vs. TrEMBL
Match: G4VNH1 (Putative zinc finger protein OS=Schistosoma mansoni OX=6183 GN=Smp_021540 PE=4 SV=1) HSP 1 Score: 318.546 bits (815), Expect = 1.907e-100 Identity = 162/335 (48.36%), Postives = 219/335 (65.37%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTDKIG--GRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNV-NNVPLPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCK-----------VNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLGF 1097 + + RKSRWS E D+ I GMPT +PPN+ P+ VYIIQLQI D++ +L+ + R PSP+PIY DGKR+NT+EYR R++LED + L+ +L + P+ P +D R +KVFIPQD++PDIN +GL+IGPRG TLK LEK+ K+IIRGKGS+ GKV + +PLPGEDE LHA+I++ S ECV+KA +IN+II++GI+ PE +NDLR+ Q+++LA+LNGT RE +GL KL+ + EAQS TN I C +CGG GHL DCK +N NP+E + +D EY + M ELG G + P GF Sbjct: 30 APRKRKSRWSAAETDRIFIPGMPTQLPPNLTPQQERVYIIQLQIEDMSRRLKSGDLGIPKNPEDRSPSPEPIYSSDGKRLNTREYRTRKKLEDDRHALVQQLMEINPEYKPPSDYKAPQNRITDKVFIPQDNHPDINFVGLLIGPRGNTLKALEKDTGAKVIIRGKGSVKEGKVGRRDGLPLPGEDEPLHAFISAPSAECVDKAVKKINEIIRQGIEIPESQNDLRRAQLRELALLNGTLREHEGLMKLRAMAEAQSIATNKIQCGICGGAGHLSTDCKALLGGQAYLDQLNANPSE--------RAKMDSEYTALMAELGVGGSQGLPPGLRGF 356
BLAST of CCHC-type domain-containing protein vs. TrEMBL
Match: A0A5K4F2D9 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 318.546 bits (815), Expect = 2.290e-100 Identity = 162/335 (48.36%), Postives = 219/335 (65.37%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTDKIG--GRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNV-NNVPLPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCK-----------VNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLGF 1097 + + RKSRWS E D+ I GMPT +PPN+ P+ VYIIQLQI D++ +L+ + R PSP+PIY DGKR+NT+EYR R++LED + L+ +L + P+ P +D R +KVFIPQD++PDIN +GL+IGPRG TLK LEK+ K+IIRGKGS+ GKV + +PLPGEDE LHA+I++ S ECV+KA +IN+II++GI+ PE +NDLR+ Q+++LA+LNGT RE +GL KL+ + EAQS TN I C +CGG GHL DCK +N NP+E + +D EY + M ELG G + P GF Sbjct: 30 APRKRKSRWSAAETDRIFIPGMPTQLPPNLTPQQERVYIIQLQIEDMSRRLKSGDLGIPKNPEDRSPSPEPIYSSDGKRLNTREYRTRKKLEDDRHALVQQLMEINPEYKPPSDYKAPQNRITDKVFIPQDNHPDINFVGLLIGPRGNTLKALEKDTGAKVIIRGKGSVKEGKVGRRDGLPLPGEDEPLHAFISAPSAECVDKAVKKINEIIRQGIEIPESQNDLRRAQLRELALLNGTLREHEGLMKLRAMAEAQSIATNKIQCGICGGAGHLSTDCKALLGGQAYLDQLNANPSE--------RAKMDSEYTALMAELGVGGSQGLPPGLRGF 356
BLAST of CCHC-type domain-containing protein vs. TrEMBL
Match: A0A183KMC8 (KH domain-containing protein OS=Schistosoma curassoni OX=6186 GN=SCUD_LOCUS16201 PE=4 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 5.017e-100 Identity = 162/335 (48.36%), Postives = 218/335 (65.07%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTDKIG--GRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNV-NNVPLPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCK-----------VNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLGF 1097 + + RKSRWS E D+ I GMPT +PPN+ P+ VYIIQLQI D++ +L+ + R PSP+PIY DGKR+NT+EYR R++LED + L+ +L + P+ P +D R +KVFIPQD++PDIN +GL+IGPRG TLK LEK+ K+IIRGKGS+ GKV + +PLPGEDE LHA+I++ S ECV+KA +IN+II++GI+ PE +NDLR+ Q+++LA+LNGT RE +GL KL+ + EAQS TN I C +CGG GHL DCK +N NP E + +D EY + M ELG G + P GF Sbjct: 30 APRKRKSRWSAVETDRIFIPGMPTQLPPNLTPQQERVYIIQLQIEDMSRRLKSGDLGIPKNPEDRSPSPEPIYSSDGKRLNTREYRTRKKLEDDRHALVQQLMEINPEYKPPSDYKAPQNRITDKVFIPQDNHPDINFVGLLIGPRGNTLKALEKDTGAKVIIRGKGSVKEGKVGRRDGLPLPGEDEPLHAFISAPSAECVDKAVKKINEIIRQGIEIPESQNDLRRAQLRELALLNGTLREHEGLMKLRAMAEAQSIATNKIQCGICGGAGHLSTDCKALLGGQAYLDQLNANPGE--------RAKMDSEYTALMAELGVGGSQGLPPGLRGF 356
BLAST of CCHC-type domain-containing protein vs. TrEMBL
Match: A0A4Z2DU10 (Splicing factor 1 isoform 1 OS=Schistosoma japonicum OX=6182 GN=EWB00_005638 PE=4 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 4.539e-99 Identity = 158/321 (49.22%), Postives = 214/321 (66.67%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNV-NNVPLPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCK-----------VNQNPAEFPPLNIPQSSPLDGEYKSFMNELG 1055 + + RKSRWS E D+ I GMPT +PPN+ P+ VYIIQLQI D++ +L+ + R PSP+PIY DGKR+NT+EYR R++LED + L+ +L + P+ P +D R +KVFIPQD++PDIN +GL+IGPRG TLK LEK+ K+IIRGKGS+ GKV + +PLPGEDE LHA+I++ S ECV+KA +IN+II++GI+ PE +NDLR+ Q+++LA+LNGT RE +GL KL+ + EAQS TN I C +CGG GHL DCK +N NP+E + +D EY + M ELG Sbjct: 30 APRKRKSRWSAAETDRIFIPGMPTQLPPNLTPQQERVYIIQLQIEDMSRRLKSGDLGIPKNPEDRSPSPEPIYSSDGKRLNTREYRTRKKLEDDRHALVQQLMEINPEYKPPSDYKPPQNRITDKVFIPQDNHPDINFVGLLIGPRGNTLKALEKDTGAKVIIRGKGSVKEGKVGRRDGLPLPGEDEPLHAFISAPSAECVDKAVKKINEIIRQGIEIPESQNDLRRAQLRELALLNGTLREHEGLMKLRAMAEAQSIATNKIQCGICGGAGHLSTDCKALLGGQAYLDQLNANPSE--------RAKMDSEYTALMAELG 342
BLAST of CCHC-type domain-containing protein vs. TrEMBL
Match: A0A4Z2DTV8 (Splicing factor 1 isoform 2 OS=Schistosoma japonicum OX=6182 GN=EWB00_005638 PE=4 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 1.409e-98 Identity = 158/321 (49.22%), Postives = 214/321 (66.67%), Query Frame = 3 Query: 135 SKKNRKSRWSTNEFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNV-NNVPLPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCK-----------VNQNPAEFPPLNIPQSSPLDGEYKSFMNELG 1055 + + RKSRWS E D+ I GMPT +PPN+ P+ VYIIQLQI D++ +L+ + R PSP+PIY DGKR+NT+EYR R++LED + L+ +L + P+ P +D R +KVFIPQD++PDIN +GL+IGPRG TLK LEK+ K+IIRGKGS+ GKV + +PLPGEDE LHA+I++ S ECV+KA +IN+II++GI+ PE +NDLR+ Q+++LA+LNGT RE +GL KL+ + EAQS TN I C +CGG GHL DCK +N NP+E + +D EY + M ELG Sbjct: 30 APRKRKSRWSAAETDRIFIPGMPTQLPPNLTPQQERVYIIQLQIEDMSRRLKSGDLGIPKNPEDRSPSPEPIYSSDGKRLNTREYRTRKKLEDDRHALVQQLMEINPEYKPPSDYKPPQNRITDKVFIPQDNHPDINFVGLLIGPRGNTLKALEKDTGAKVIIRGKGSVKEGKVGRRDGLPLPGEDEPLHAFISAPSAECVDKAVKKINEIIRQGIEIPESQNDLRRAQLRELALLNGTLREHEGLMKLRAMAEAQSIATNKIQCGICGGAGHLSTDCKALLGGQAYLDQLNANPSE--------RAKMDSEYTALMAELG 342
BLAST of CCHC-type domain-containing protein vs. Ensembl Cavefish
Match: sf1 (splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]) HSP 1 Score: 265.774 bits (678), Expect = 1.780e-81 Identity = 144/320 (45.00%), Postives = 199/320 (62.19%), Query Frame = 3 Query: 117 HSEFTISKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEF---PPLNIPQSSPLDGEYKSFMNELG 1055 S+ KK +KSRWS+ D K VI GMPT IPP + + YI+QLQI D+T KL+ + + R PSP+PIY +GKR+NT+EYR R++LE+ + L+ ++ L P+ P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA ++I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK + + PP + + +D EY S M ELG Sbjct: 160 QSQGGDQKKRKKSRWSSETPDQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKKLEEERHSLITEMVGLNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSEPRSITNTTLCTKCGGAGHIASDCKFTSSYTQRQGEPPQSAQDKARMDKEYLSLMAELG 479
BLAST of CCHC-type domain-containing protein vs. Ensembl Cavefish
Match: qki2 (protein quaking-B [Source:NCBI gene;Acc:103029551]) HSP 1 Score: 90.8929 bits (224), Expect = 4.157e-20 Identity = 52/138 (37.68%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 474 DKIG--GRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGED---ECLHAYITSFSKEC-----VEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETD 857 D +G + +EK+++P +YPD N +G I+GPRGLT K LE E KI++RGKGS+ + K N P + E LH IT + +++A + + K++ + E E+ L+K Q+ +LAILNGTYR+ + Sbjct: 74 DAVGPIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDAN 208
BLAST of CCHC-type domain-containing protein vs. Ensembl Cavefish
Match: qki2 (protein quaking-B [Source:NCBI gene;Acc:103029551]) HSP 1 Score: 90.8929 bits (224), Expect = 4.631e-20 Identity = 52/138 (37.68%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 474 DKIG--GRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGED---ECLHAYITSFSKEC-----VEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETD 857 D +G + +EK+++P +YPD N +G I+GPRGLT K LE E KI++RGKGS+ + K N P + E LH IT + +++A + + K++ + E E+ L+K Q+ +LAILNGTYR+ + Sbjct: 74 DAVGPIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDAN 208
BLAST of CCHC-type domain-containing protein vs. Ensembl Cavefish
Match: qki2 (protein quaking-B [Source:NCBI gene;Acc:103029551]) HSP 1 Score: 91.2781 bits (225), Expect = 5.345e-20 Identity = 52/138 (37.68%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 474 DKIG--GRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGED---ECLHAYITSFSKEC-----VEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETD 857 D +G + +EK+++P +YPD N +G I+GPRGLT K LE E KI++RGKGS+ + K N P + E LH IT + +++A + + K++ + E E+ L+K Q+ +LAILNGTYR+ + Sbjct: 74 DAVGPIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDAN 208
BLAST of CCHC-type domain-containing protein vs. Ensembl Cavefish
Match: qkib (QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54]) HSP 1 Score: 90.8929 bits (224), Expect = 5.390e-20 Identity = 51/131 (38.93%), Postives = 79/131 (60.31%), Query Frame = 3 Query: 489 RFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGED---ECLHAYITSFSKEC-----VEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETD 857 + +EK+++P +YPD N +G I+GPRGLT K LE E KI++RGKGS+ + K N P + E LH IT + +++A + +NK++ + E E+ L+K Q+ +LAILNGTYR+ + Sbjct: 81 QLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKVRANRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVNKLL---VPAAEGEDSLKKMQLMELAILNGTYRDAN 208
BLAST of CCHC-type domain-containing protein vs. Ensembl Sea Lamprey
Match: sf1 (splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]) HSP 1 Score: 266.159 bits (679), Expect = 1.220e-82 Identity = 141/313 (45.05%), Postives = 200/313 (63.90%), Query Frame = 3 Query: 138 KKNRKSRWSTNEFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVN-NVPLPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYR--ETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSE 1061 KK ++SRW T +K + GMPT +PP +N YI+QLQI D+ KL+ + R PSP+PIY +GKR+NT+EYR R+++ED + L+ +++ L PD P D + E++ IPQD++PDIN IGLIIGPRG TLK +EKE N KI+IRGKGS+ GK+ PLPGEDE LHA +T+ +++ V KA D+I I+++GI+ PE +N+LR+ Q+++LA LNGT R E+ L + E +S VTN IC+ CGG GH+ DC+++ + PP + + +D EY S M ELG E Sbjct: 86 KKAKRSRWDTEMTEKIAVPGMPTVLPPGLNKDQERAYIVQLQIEDMNRKLRTGDLGIPPNPEERSPSPEPIYNNEGKRLNTREYRTRKKIEDDRHVLIQEMYRLNPDYKPPADYKPPAQKISERIMIPQDEHPDINFIGLIIGPRGNTLKKIEKECNAKIMIRGKGSVKEGKIGHKPGQPLPGEDEPLHALVTASTQDNVRKAVDQIKNILKQGIEVPEGQNELRRMQLRELARLNGTLRDDESRVLRPWQAPPETRS-VTNMTICNRCGGAGHIASDCRIS---SMGPPQGNQERARMDEEYLSLMAELGEE 394
BLAST of CCHC-type domain-containing protein vs. Ensembl Sea Lamprey
Match: khdrbs2 (KH domain containing, RNA binding, signal transduction associated 2 [Source:NCBI gene;Acc:768147]) HSP 1 Score: 59.3066 bits (142), Expect = 4.414e-10 Identity = 37/125 (29.60%), Postives = 66/125 (52.80%), Query Frame = 3 Query: 489 RFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGED------ECLHAYITSFSKECVEKATDRINKIIQEGIDF--PELENDLRKNQMKQLAILNG 839 + E+V IP +P N +G ++GPRG +LK +++E K+ I GKGS+ + K + GE+ E LH I F+ +A R+ + E + P+ +++R+ Q+++L+ L G Sbjct: 36 KLAERVIIPAKQHPKFNFVGKLLGPRGNSLKRMQEETGTKMSILGKGSMRD-KALEEEMRKSGENKYAHLSEELHVLIEVFAPPS--EAYSRMGHALDEVKKYLVPDYNDEIRQEQLRELSFLKG 157
BLAST of CCHC-type domain-containing protein vs. Ensembl Sea Lamprey
Match: KHDRBS3 (KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]) HSP 1 Score: 56.9954 bits (136), Expect = 1.747e-9 Identity = 38/122 (31.15%), Postives = 66/122 (54.10%), Query Frame = 3 Query: 498 EKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGE------DECLHAYITSFSKECVEKATDRINKIIQEGIDF--PELENDLRKNQMKQLAILNG 839 E+V IP +P N IG ++GPRG +LK L++E K+ I GKGS+ + + ++ GE +E LH I F+ +A R+ + E + P+ +++R+ Q+++L+ L G Sbjct: 39 ERVIIPVRQHPKFNFIGKLLGPRGNSLKRLKEETGTKLSILGKGSMRD-RDKEEDLRKSGEAKYAHLNEDLHVLIEVFAPPS--QAYRRMGHALDEVKKYLVPDYNDEIRQQQLRELSFLKG 157
BLAST of CCHC-type domain-containing protein vs. Ensembl Sea Lamprey
Match: khdrbs1a (KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]) HSP 1 Score: 53.1434 bits (126), Expect = 4.348e-8 Identity = 35/126 (27.78%), Postives = 64/126 (50.79%), Query Frame = 3 Query: 489 RFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGE------DECLHAYITSFSKECVEKATDRINKIIQEGIDF--PELENDLRKNQMKQLAILNGT 842 + EKV IP +P N +G ++GP+G TLK L+ E ++ I GKG + + + + GE +E LH I ++ + +A R+ ++E F P+ +++ + Q+ ++ LNG Sbjct: 60 KLAEKVLIPAKQHPKFNFVGKLLGPQGNTLKRLQVETGTRMAIMGKGCMKD-RAKEEELRNSGEAKYVHLNEELHVLIEVYAP--LPEAYSRMGHALEEVKKFFNPDYNDEICQEQLMEMTYLNGV 182
BLAST of CCHC-type domain-containing protein vs. Ensembl Yeast
Match: MSL5 (Component of commitment complex; which defines first step in splicing pathway; essential protein that interacts with Mud2p and Prp40p, forming a bridge between the intron ends; also involved in nuclear retention of pre-mRNA; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000004106]) HSP 1 Score: 167.162 bits (422), Expect = 1.739e-47 Identity = 104/284 (36.62%), Postives = 160/284 (56.34%), Query Frame = 3 Query: 153 SRWSTN--EFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLM-LKLHTLRPDLVPHTD-KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGE---DECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETD------GLNKLKMLGEAQSCVTNT--IICSLCGGTGHLPRDC 959 S W N E D +P+ I + + Y + +I +IT KL+ ++ R PSP P+Y GKR NT+E R R++LED + +L+ + L T+ P VP D K +F++K +IP D YPD+N +GL++GPRG TL+ L+++ N KI IRG+GS+ GK N +++P PG ++ LH I + S++ ++K I+ + + PE +NDL++ Q+++LA LNGT RE + GL K + N I+C +CG TGH RDC Sbjct: 33 SLWRKNTVESDVHRFNSLPSKISGALTREQIYSYQVMFRIQEITIKLRTNDFVPP-SRKNRSPSPPPVYDAQGKRTNTREQRYRKKLEDERIKLVEIALKTI-PYFVPPDDYKRPTKFQDKYYIPVDQYPDVNFVGLLLGPRGRTLRKLQEDSNCKIAIRGRGSVKEGK-NASDLP-PGAMNFEDPLHCLIIADSEDKIQKGIKVCQNIVIKAVTSPEGQNDLKRGQLRELAELNGTLREDNRPCPICGLKDHKRYDCPNRKIPNIQGIVCKICGQTGHFSRDC 312
BLAST of CCHC-type domain-containing protein vs. Ensembl Nematostella
Match: EDO45484 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RSV9]) HSP 1 Score: 172.17 bits (435), Expect = 4.999e-51 Identity = 96/215 (44.65%), Postives = 133/215 (61.86%), Query Frame = 3 Query: 108 EPTHSEFTISKKNRKSRWSTNEFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTDKIGG--RFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGK------VNVNNVPLPGEDECLHAYITSFSKECV 728 E T S KK RKSRW E K +I GMPTT+PPN+ P + Y++QL+I +I+ L+ + R PSP+PIY DGKR+NT+++R R+RLED + + + + + PD P D + ++KV IPQD+ P++N IGL+IGPRG TLK++EKE N KI+IRGKGSI +GK + + N GEDE LHA +T + E V Sbjct: 51 EKTPSGREDRKKKRKSRWG-GEDKKMIIPGMPTTLPPNLKPDQQKAYLMQLRIEEISRMLRTGDLGIPDNPEDRSPSPEPIYNTDGKRLNTRDFRVRKRLEDERHKFIQDMMKINPDFKPPADYKPPLIKIQDKVMIPQDENPEVNFIGLLIGPRGNTLKNMEKETNAKIMIRGKGSIKDGKQGRGRDMQLMNS---GEDEPLHALVTGPTAESV 261
BLAST of CCHC-type domain-containing protein vs. Ensembl Nematostella
Match: EDO30297 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T170]) HSP 1 Score: 83.1889 bits (204), Expect = 9.224e-19 Identity = 47/127 (37.01%), Postives = 76/127 (59.84%), Query Frame = 3 Query: 498 EKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGE---DECLHAYITSFSKE--C---VEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRET 854 EKV+ P ++P N +G +IGPRG+TL+++E K+++RGKGS+ + K+ P DE LH I+ E C +EKA +R+ +++ E E++++K Q+K LA+LNGT RE+ Sbjct: 55 EKVYAPVKEFPKFNFVGRVIGPRGMTLREIESTTGCKLLVRGKGSMKDKKLEEEKRGQPNYEHLDEDLHVLISCEDTEERCHTRLEKAVERVQSLLR---PVEEGEDEIKKKQLKDLALLNGTLRES 178
BLAST of CCHC-type domain-containing protein vs. Ensembl Nematostella
Match: EDO44127 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RWI4]) HSP 1 Score: 60.077 bits (144), Expect = 8.393e-11 Identity = 38/124 (30.65%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 489 RFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGEDECLHAYITSFSKECVE------KATDRINKIIQEGIDF--PELENDLRKNQMKQLAILN 836 + EKVFIP D+P N +G ++GPRG T K L+ K+ I GKGS+ + + L ++ +A++ +E +A R+ I+E + PE+ +++ + QM+++AILN Sbjct: 48 KLSEKVFIPVKDHPKFNFVGKLLGPRGNTFKRLQNSTGTKMSILGKGSMRDKE---KEEELRATEDPKYAHLGEELHVLIEVEAPPGQAHARLGIAIEEIKKYLIPEMNDEIHQEQMREMAILN 168
BLAST of CCHC-type domain-containing protein vs. Ensembl Nematostella
Match: EDO28641 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T5W9]) HSP 1 Score: 56.9954 bits (136), Expect = 5.580e-10 Identity = 22/54 (40.74%), Postives = 38/54 (70.37%), Query Frame = 3 Query: 489 RFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKV 650 + EKV+ P ++P N +G +IGPRG+TL+++E K+++RGKGS+ + K+ Sbjct: 91 KLVEKVYAPVKEFPKFNFVGRVIGPRGMTLREIESTTGCKLLVRGKGSMKDKKL 144
BLAST of CCHC-type domain-containing protein vs. Ensembl Nematostella
Match: EDO27543 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T8Z1]) HSP 1 Score: 54.6842 bits (130), Expect = 1.833e-9 Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 3 Query: 117 HSEFTIS-------KKNRKSRWSTNEFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQ 290 H++ +IS KK RKSRW E K +I GMPTT+PPN+ P + Y++QL+I +I+ L+ Sbjct: 3 HTKSSISYLGREDRKKKRKSRWG-GEDKKMIIPGMPTTLPPNLKPDQQKAYLMQLRIEEISRMLR 66
BLAST of CCHC-type domain-containing protein vs. Ensembl Medaka
Match: sf1 (splicing factor 1 [Source:NCBI gene;Acc:101157648]) HSP 1 Score: 265.388 bits (677), Expect = 7.057e-82 Identity = 145/328 (44.21%), Postives = 199/328 (60.67%), Query Frame = 3 Query: 120 SEFTISKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEF------PPLNIPQSSPLDGEYKSFMNELGSEGRPT 1073 S+ KK +KSRWS+ D K +I GMPT IPP + YI+QLQI D+T KL+ + + R PSP+PIY +GKR+NT+EYR R+++E+ + L+ ++ L PD P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA ++I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK A PP + + +D EY S M ELG P+ Sbjct: 80 SKSDFGKKRKKSRWSSETPDQKTIIPGMPTVIPPGLTRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKKIEEERHALITEMIGLNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQNSEPRSITNTTLCTKCGGAGHISSDCKYTSTFAAHRATGGEPPQSAQDKARMDKEYLSLMAELGEAPVPS 407
BLAST of CCHC-type domain-containing protein vs. Ensembl Medaka
Match: sf1 (splicing factor 1 [Source:NCBI gene;Acc:101157648]) HSP 1 Score: 265.003 bits (676), Expect = 8.009e-82 Identity = 145/328 (44.21%), Postives = 199/328 (60.67%), Query Frame = 3 Query: 120 SEFTISKKNRKSRWSTNEFD-KCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTD--KIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVP-LPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEF------PPLNIPQSSPLDGEYKSFMNELGSEGRPT 1073 S+ KK +KSRWS+ D K +I GMPT IPP + YI+QLQI D+T KL+ + + R PSP+PIY +GKR+NT+EYR R+++E+ + L+ ++ L PD P D R +KV IPQD+YP+IN +GL+IGPRG TLK++EKE KI+IRGKGS+ GKV + LPGEDE LHA +T+ + E V+KA ++I I+++GI+ PE +NDLRK Q+++LA LNGT RE D +TNT +C+ CGG GH+ DCK A PP + + +D EY S M ELG P+ Sbjct: 80 SKSDFGKKRKKSRWSSETPDQKTIIPGMPTVIPPGLTRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKKIEEERHALITEMIGLNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQNSEPRSITNTTLCTKCGGAGHISSDCKYTSTFAAHRATGGEPPQSAQDKARMDKEYLSLMAELGEAPVPS 407
BLAST of CCHC-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000045137.1 (protein quaking-B-like [Source:NCBI gene;Acc:101161529]) HSP 1 Score: 90.5077 bits (223), Expect = 5.601e-20 Identity = 51/132 (38.64%), Postives = 81/132 (61.36%), Query Frame = 3 Query: 486 GRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGED---ECLHAYIT-----SFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETD 857 + +EK+++P +YPD N +G I+GPRGLT K LE E KI++RGKGS+ + K N P + E LH IT + +K +++A + + K++ + E E++L+K Q+ +LAILNGTYR+ + Sbjct: 82 AQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEMNRGKPNWEHLNEDLHVLITVEDTHNRAKIKLQRAINEVKKLL---VPAAEGEDNLKKMQLMELAILNGTYRDAN 210
BLAST of CCHC-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000044982.1 (protein quaking-B-like [Source:NCBI gene;Acc:101161529]) HSP 1 Score: 90.5077 bits (223), Expect = 6.476e-20 Identity = 51/132 (38.64%), Postives = 81/132 (61.36%), Query Frame = 3 Query: 486 GRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGED---ECLHAYIT-----SFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETD 857 + +EK+++P +YPD N +G I+GPRGLT K LE E KI++RGKGS+ + K N P + E LH IT + +K +++A + + K++ + E E++L+K Q+ +LAILNGTYR+ + Sbjct: 82 AQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEMNRGKPNWEHLNEDLHVLITVEDTHNRAKIKLQRAINEVKKLL---VPAAEGEDNLKKMQLMELAILNGTYRDAN 210
BLAST of CCHC-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000033069.1 (protein quaking-B-like [Source:NCBI gene;Acc:101161529]) HSP 1 Score: 90.8929 bits (224), Expect = 6.747e-20 Identity = 51/132 (38.64%), Postives = 81/132 (61.36%), Query Frame = 3 Query: 486 GRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGED---ECLHAYIT-----SFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETD 857 + +EK+++P +YPD N +G I+GPRGLT K LE E KI++RGKGS+ + K N P + E LH IT + +K +++A + + K++ + E E++L+K Q+ +LAILNGTYR+ + Sbjct: 82 AQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEMNRGKPNWEHLNEDLHVLITVEDTHNRAKIKLQRAINEVKKLL---VPAAEGEDNLKKMQLMELAILNGTYRDAN 210
BLAST of CCHC-type domain-containing protein vs. Planmine SMEST
Match: SMESG000031862.1 (SMESG000031862.1) HSP 1 Score: 756.903 bits (1953), Expect = 0.000e+0 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 3 Query: 69 MKRKSITSTTKPNEPTHSEFTISKKNRKSRWSTNEFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTDKIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLGFLPEFPPPNASVDGANSFVRKFVFNG 1172 MKRKSITSTTKPNEPTHSEFTISKKNRKSRWSTNEFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTDKIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLGFLPEFPPPNASVDGANSFVRKFVFNG Sbjct: 1 MKRKSITSTTKPNEPTHSEFTISKKNRKSRWSTNEFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTDKIGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLGFLPEFPPPNASVDGANSFVRKFVFNG 368
BLAST of CCHC-type domain-containing protein vs. Planmine SMEST
Match: SMESG000031867.1 (SMESG000031867.1) HSP 1 Score: 458.759 bits (1179), Expect = 3.123e-159 Identity = 228/365 (62.47%), Postives = 274/365 (75.07%), Query Frame = 3 Query: 78 KSITSTTKPNEPTHSEFTISKKNRKSRWSTNEFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTDKI-GGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQNPAEFPPLNIP-QSSPLDGEYKSFMNELGSEGRPTVLPAYLGFLPEFPPPNASVDGANSFVRKFVF 1166 K S + +SE K+ R+S+WS+ + +P + P DAEVY IQ+QI +T+KL +QNYT EIEAM R PSPDP+YG DGKRINTKEYRARER+E+RK+ L+L+L+ LRPDLVPH DK+ G R EEKVFIPQDDYPDIN GLIIGPRG+T KDLEKE KI++RGKGS GK+N + PLPGEDE LHAYITS S+E V++A ++I KIIQ+GI+FPEL+NDLRKNQMKQLAILNGTYRETDGLNKLK+L EAQS TNTIICSLCGGTGHLPRDCKVN N E P + P Q L+GEY +F+NELG + + PAYLGF+P+ N+S GA+SFVR F+F Sbjct: 154 KQEASVKTEDSDNNSEKATRKRKRESKWSSGQ----------AKVPLYLKPDDAEVYSIQIQINSLTTKLAQQNYTEEIEAMCRAPSPDPVYGHDGKRINTKEYRARERMEERKRNLILRLYALRPDLVPHADKMMGARIEEKVFIPQDDYPDINFAGLIIGPRGMTQKDLEKETGTKILLRGKGSAKPGKLNGGSAPLPGEDEPLHAYITSMSRESVDRAVEKIKKIIQDGIEFPELQNDLRKNQMKQLAILNGTYRETDGLNKLKILSEAQSIATNTIICSLCGGTGHLPRDCKVNSN--EIPMMEFPVQHVQLEGEYNNFINELGID-EASAKPAYLGFMPQQSSGNSS-QGASSFVRNFIF 504
BLAST of CCHC-type domain-containing protein vs. Planmine SMEST
Match: SMESG000060577.1 (SMESG000060577.1) HSP 1 Score: 433.335 bits (1113), Expect = 1.041e-149 Identity = 222/388 (57.22%), Postives = 279/388 (71.91%), Query Frame = 3 Query: 18 TTYIISKYL-KNFILNSKMKRKSITSTTKPNEPTHSEFTISKKNRKSRWSTNEFDKCVIAGMPTTIPPNMNPKDAEVYIIQLQITDITSKLQKQNYTSEIEAMTRLPSPDPIYGPDGKRINTKEYRARERLEDRKKQLMLKLHTLRPDLVPHTDK-IGGRFEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGEDECLHAYITSFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRETDGLNKLKMLGEAQSCVTNTIICSLCGGTGHLPRDCKVNQN---PAEFPPLNIPQSSPLDGEYKSFMNELGSEGRPTVLPAYLGFLPEFPPPNASVDGANSFVRKFVF 1166 T Y +Y IL S K ++ ++ +E T K+ R+S+W T + +P +N +DAEVY IQ+Q+ +T+KL ++NY EIEAM R PSPDP+Y +GKRINTKE+RARERL+DRK+ L+L+LH LRP+LVPH DK IG R EE++FIPQ+DYPDIN GLIIGPRG+T K+LEKE KI+IRGKGS G+ N + PLPGEDE LHAY+TS S+E V+KA ++I KIIQ+GI+FPEL+NDLRKNQMKQLAI NGTYRET+GLNKLK+LGEAQS VTNTIICSLCGGTGHLPRDC VN N FP PQ + L+GEY +F+NELG +G T PA+LGF+P+ N + G +SFV+ F+F Sbjct: 116 TDYDTRRYSPTQHILRSDHKEENFFNSDNNSESTR------KRKRESKWGTGQ----------AKVPMYLNSEDAEVYSIQIQLNSVTTKLTQRNYAEEIEAMCREPSPDPVYNHEGKRINTKEFRARERLDDRKRNLILRLHALRPELVPHADKMIGARIEERIFIPQEDYPDINFAGLIIGPRGMTQKELEKETGTKILIRGKGSAKPGQFNGDGAPLPGEDEPLHAYVTSMSRESVDKAAEKIRKIIQDGIEFPELQNDLRKNQMKQLAIFNGTYRETEGLNKLKILGEAQSIVTNTIICSLCGGTGHLPRDCLVNSNLIPMMHFP----PQHAKLEGEYDNFINELGVDGTDTK-PAFLGFIPQHNSGN-TTQGTSSFVKNFIF 481
BLAST of CCHC-type domain-containing protein vs. Planmine SMEST
Match: SMESG000068399.1 (SMESG000068399.1) HSP 1 Score: 99.7525 bits (247), Expect = 4.949e-23 Identity = 58/134 (43.28%), Postives = 83/134 (61.94%), Query Frame = 3 Query: 492 FEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHN--------GKVNVNNVPLPGEDECLHAYIT--SFSKECVEK---ATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRET 854 +EKV++P D+ P+ N IG I+GPRGLT K LE+E K++IRGKGS+ N GK N ++ ++ LH IT + V K A D I K I++GI P+ E+D++K Q+ +LAI+NGTYR+T Sbjct: 92 LQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHL-----NDKLHINITVEDYENRAVIKLKWALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDT 220
BLAST of CCHC-type domain-containing protein vs. Planmine SMEST
Match: SMESG000080790.1 (SMESG000080790.1) HSP 1 Score: 75.0998 bits (183), Expect = 8.758e-15 Identity = 45/128 (35.16%), Postives = 74/128 (57.81%), Query Frame = 3 Query: 495 EEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHNGKVNVNNVPLPGED---ECLHAYITSFSKECVEKATDRINKI-------IQEGIDFPELENDLRKNQMKQLAILNGTYR 848 +EK+F+P + P+ N +G I+GPRG T K LE++ + KI+IRG+GS+ + N P + E LH I +C + +++N I IQEG++ PE + L++ Q+ +L+ILN + R Sbjct: 64 QEKIFLPVKENPNYNFVGRILGPRGYTAKQLEQKLDCKIMIRGRGSMRDQNKEEQNRNKPNWEHLNEDLHVLIN--ISDCENRVDEKMNTIKEAISSFIQEGLNTPESLDTLKQMQLMELSILNESDR 189 The following BLAST results are available for this feature:
BLAST of CCHC-type domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of CCHC-type domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of CCHC-type domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of CCHC-type domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of CCHC-type domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of CCHC-type domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of CCHC-type domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of CCHC-type domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of CCHC-type domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of CCHC-type domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 4
BLAST of CCHC-type domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of CCHC-type domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of CCHC-type domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of CCHC-type domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30019878 ID=SMED30019878|Name=CCHC-type domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1237bpback to top protein sequence of SMED30019878-orf-1 >SMED30019878-orf-1 ID=SMED30019878-orf-1|Name=SMED30019878-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=369bp MKRKSITSTTKPNEPTHSEFTISKKNRKSRWSTNEFDKCVIAGMPTTIPPback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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