ATP binding cassette subfamily A member 1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30019868 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 7
Homology
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Human
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:29]) HSP 1 Score: 881.708 bits (2277), Expect = 0.000e+0 Identity = 598/1739 (34.39%), Postives = 931/1739 (53.54%), Query Frame = 1 Query: 514 YNELGEIICGSPEND-FKLFMRNFIKNQRRKRSLLT--CQLIFQSFFQNSIVKFE---------------MYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWR---------------LHFQTFLLDYISNNVF-------INDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPL--------DSLKDIDKLTNQSFRNFLAVIIFNETFQYLTPKNTTF---LSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDL-TEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXX------------------------------------XXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQ----------NPDQKQSKFLDQSD----HLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWL------MMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCM--NPSIYRLDNYQCFYRNENNMWS----PASILDI--------PMVSPECDCS----KTGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRK-----------LYGGFQFVLPSTFGW-SSKLIGDSPFWEELRDFVNASQANHNQSNLNSL-KFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYN----ALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 Y + I+CG PE K+ N+ ++ K + ++F+ NS + ++ L PL+ GK+ Y P+ RQ++ + N TF+ L W + LLD N+ F ++ + A+ + +P+ + N ++ + + ++ I R + C L++ P+ S++ +D+ R F A I+F +TP + + Y+IR+ + ++ T K K D +W P PR + F D +YV GF +LQ+ ++QA I ++T E + G M MPYPCY+ D FL+ ++ +P + +AW SV V+IK IVYEKE+RLKE M++MGL+N + W SWFIS+++ L++ ++ V L+L + S +VVF + + + I Q F++S FS+AN+A+ GGI+YFT Y+ +V+ + + + T+ LLS VAF ++ +E+ GVQ+ NLF++P E F + + +M+ D+F+Y ++TWY+EAVFPGQYG+ +PW F C +SYW +S P +NQ I+ E EP +LKLG+SI NLVK+Y ++ L LNFYE QIT+FLGHNGAGKTTT+SILTG+F P+SGTAYIL +DIR+EM +IRQ +G+CPQ+NVLFD LTVE+HI+FY LK + + +++ + ++ DV L + K+ + + LSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP++RRGIW+LL+KYR RTIIL+THHMDEAD L DR+AIIS GKL C GS +FLK + G GYYL+L+K + + + I ++ ++++AR++E+ + T VLP F ELF +D ++++ I SYG+S+T+LEE+FLKVA++ ++ E S + + + F +P+ +++ L D + +KG+ L QQQ +AL KR A+R KGF A+++LP + + ++F I K +++ PW+ +S E+ T L L+N L D G G RCM NP + + C E W+ P +I+D+ SP C CS K +C G P R ++D L +LTG NISDYL+K + ++ K YGGF + +T S+ + D+ ++++ + ++ + LNSL +F+ L + ++W N+KG+ ++ ++ N+ +N +LR+ L K YGI+ N P+ + + + +++ ++I VIF +SF+PASFV+FL++ERVS +K QF+SG+ P +YW+SNF+WD+ Y++P ++IIIFI F +SY+ S N LLL+ YG +I P MYP SF PSTA+VVL + NL +G +++TF+L++ N L INDILK VFLIFP F LGRG++D+ N ++++ + N L WD+ G LF++ + ++++ ++I+ R K S L N ED DV ER+R+ +D+L + LTKIY + R+ AV+ +C G+ GECFGLLGVNGAGK++TF Sbjct: 301 YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEEDAETFYDNSTTPYCNDLMKNLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELSPKIWTFMENSQEMDLVRMLLDSRDNDHFWEQQLDGLDWTAQDIVAFLAKHPEDVQSSNG--SVYTWREAFNETNQAIRTISRFMECVNLNKLEPIATEVWLINKSMELLDE------RKFWAGIVFTG----ITPGSIELPHHVKYKIRMDIDNVERTNKIK--DGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVLTGTEK-KTGVYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNSILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFVFLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFTLKIFASLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTSVSMMLFDTFLYGVMTWYIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHP---GSNQK-RISEICMEEEPTHLKLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYR-QGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEE---SGVDAETSDGTLPARRNRRAFGDKQSCLRPFTEDDAADPNDSDIDPESRETDLLSGMDGKGSYQVKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYNEQYTFVSNDAPEDTGT--------LELLNALT----KDPG-FGTRCMEGNP----IPDTPCQAGEEE--WTTAPVPQTIMDLFQNGNWTMQNPSPACQCSSDKIKKMLPVCPPGAGGL-PPPQRKQNTADILQDLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGVSNTQALPPSQEVNDA--IKQMKKHLKLAKDSSADRFLNSLGRFMTGLDTKNNV--------KVWFNNKGWHAISSFLNVINNAILRANLQKGE-NPSHYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTDN--KLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAM-ADALERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPL------NDEDEDVRRERQRILDGGGQNDILEIKELTKIY--------------------RRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTF 1956 HSP 2 Score: 179.874 bits (455), Expect = 1.817e-44 Identity = 101/320 (31.56%), Postives = 169/320 (52.81%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 + I L K+Y + P ++ + + + LG NGAGK++T +LTG + + G A++ I + + + Q +G CPQ++ + + LT +H+ F+ LL+ + + E+ V I+ + L + + + SGG KRKLS AMA IG VVFLDEPT G+DP ARR +W+ + R+++LT+H M+E + L R+AI+ G+ +C GS+ LK +FG+GY + SN + + + F + + + E+ R LP + +F L Q + I Y +S T+L++VF+ A D Sbjct: 1912 LEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGY-----TIVVRIAGSNPDLKPVQDFFGLAFPGSVLKEKHRNMLQYQLPS---SLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKD 2223 HSP 3 Score: 65.855 bits (159), Expect = 9.364e-10 Identity = 31/77 (40.26%), Postives = 43/77 (55.84%), Query Frame = 1 Query: 28 QLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY 258 QLR LLWKN +RR+ LL+E+ PL + IL +VR S Y+ C F K M S G +P++ +C N C+ Sbjct: 6 QLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKAMPSAGTLPWVQGIICNANNPCF 82
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Human
Match: ABCA7 (ATP binding cassette subfamily A member 7 [Source:HGNC Symbol;Acc:HGNC:37]) HSP 1 Score: 799.275 bits (2063), Expect = 0.000e+0 Identity = 536/1634 (32.80%), Postives = 855/1634 (52.33%), Query Frame = 1 Query: 670 MYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRL---HFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSW-------------IERGLNCTELDRFIPLDSLKDIDKLTNQSFR-----NFLAVIIF------NETFQYLTPK-NTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXX------------------------XXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCN---ILKMKLRINATKTEIFLNQNPDQKQSKFLDQSD-----HLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIR--CMNPSIYRLDNYQCFYRNENNM----WSPASILDIPMVSPECDCSKTG-NQICNDLRSGGPPNSY--RIMTSSDKLNNLTGYNISDYLLKNFPKLSRK-----------LYGGFQFVLPSTFGWSSKLIGDS--PFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNS--NSIVKHEYNA-LQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRN-----TEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 ++ L PLI GK+ + P+ R+++ + N TF+ L LR W + TF+ D + + ++ + P D + L +S++D S +SW + R C LD+ L++ L +++ + F A ++F ++ ++ TP + +IR+ + + T K + DRFW P P + TD +YV GF++LQ+ +++A + V + + G + MPYPCY+ D FL+ L+ LP L +AW SVT+ +K++V EKE+RL++ M+ MGL+ V W+ WF+S + ++ ++ + L+L I S VVF + + ++ + Q+F++S FFS+AN+A+ GG+ YF+ Y+ +V+ + L + LLS VAF + + E+ EG Q+ N+ P + F + L+++D+ +Y L TWY+EAV PGQYG+ +PWNF RSYW P + + E P L G+S+ +L K +P + P + L+L+FY+ ITAFLGHNGAGKTTT+SIL+G+F PS G+A+IL D+R+ M +IR +G+CPQYNVLFD LTV++H++FYG LK + + R+++DV L K + + HLSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP +RRGIW+LL+KYR RT+IL+THH+DEA+ L DRVA+++ G+L CCGS +FL+R G GYYL+L+K + + S +L V+ ++ AR++EE + +VLP + F LF+ LD +AE+ + YG+SDTSLEE+FLKV ++ ++ S + C L + LR+ E L + DQ ++G+ L +QQ+ AL +KR+ A+R +G A+++LP L + ++F I +++SP M ++ F G LE+ L E+G+ + S +R + + W+P S SP C CS+ G ++ D + + S + + NLTG N+SD+L+K +P+L R+ YGGF S + +G S W L + + NL + Q + K IW N+KG+ SM A+ N SN +LR+ L + + I+ N P+ + + + +++ ++I V+F +SF+PASF + L+EERV+ +K Q + G++P +YW+ NFLWD+ Y++P I+++IF+AF ++Y+ N A +LLL+ YG +I P MYP SFF S PSTA+VVL NL +G +++TF+L++ + + L+E++ ILK+VFLIFP F LGRG++D+ N + ++ + L+W++ G+ L + ++I + + + ++ L + +R+ ED DV ERER+ DVL + NLTK+Y +G+ R AV+ LC G+ GECFGLLGVNGAGKT+TF Sbjct: 283 LWRRLKPLILGKLLFAPDTPFTRKLMAQVNRTFEELTLLRDVREVWEMLGPRIFTFMNDSSNVAMLQRLLQMQDEGRRQPRPGGRDHMEAL------RSFLDPGSGGYSWQDAHADVGHLVGTLGRVTECLSLDK---LEAAPSEAALVSRALQLLAEHRFWAGVVFLGPEDSSDPTEHPTPDLGPGHVRIKIRMDIDVVTRTNKIR--DRFWDPGPAADPLTDLRYVWGGFVYLQDLVERAAVR-VLSGANPRAGLYLQQMPYPCYVDDVFLRVLSRSLPLFLTLAWIYSVTLTVKAVVREKETRLRDTMRAMGLSRAVLWLGWFLSCLGPFLLSAALLVLVLKLGDILPYSHPGVVFLFLAAFAVATVTQSFLLSAFFSRANLAAACGGLAYFSLYLPYVLCVAWRDRLPAGGRVAASLLSPVAFGFGCESLALLEEQGEGAQWHNVGTRPTADV-FSLAQVSGLLLLDAALYGLATWYLEAVCPGQYGIPEPWNFPFRRSYWCGPRPPKSPAPCPTPLDPKVLV-----EEAPPGLSPGVSVRSLEKRFPGSPQPALRGLSLDFYQGHITAFLGHNGAGKTTTLSILSGLFPPSGGSAFILGHDVRSSMAAIRPHLGVCPQYNVLFDMLTVDEHVWFYGRLKGLSAAVVGPEQDRLLQDVGLVSKQSVQTRHLSGGMQRKLSVAIAFVGGSQVVILDEPTAGVDPASRRGIWELLLKYR-EGRTLILSTHHLDEAELLGDRVAVVAGGRLCCCGSPLFLRRHLGSGYYLTLVKARLPLTTNEKADTDMEGSVDTRQEKKNGSQGSRVGTPQLLALVQHWVPGARLVEELPHELVLVLPYTGAHDGSFATLFRELDTRLAELRLTGYGISDTSLEEIFLKVVEECAADTDMEDGSCGQHLCTGIAGLDVTLRLKMPPQETALENGEPAGSAPETDQGSGPDAVGRVQGWALTRQQLQALLLKRFLLARRSRRGLFAQIVLPALFVGLALVFSLIVPPFGHYPALRLSP-----TMYGAQVSFFSEDAPGDPGRARLLEAL----LQEAGLEEPPVQHSSHRFSAPEVPAEVAKVLASGNWTPES------PSPACQCSRPGARRLLPDCPAAAGGPPPPQAVTGSGEVVQNLTGRNLSDFLVKTYPRLVRQGLKTKKWVNEVRYGGFSLGGRDPGLPSGQELGRSVEELWALLSPLPGGA-LDRVLKNLTAWAHSLDAQDSLK----------IWFNNKGWHSMVAFVNRASNAILRAHLPPGPARHA-HSITTLNHPLNLTKEQLSEGALMASSVDVLVSICVVFAMSFVPASFTLVLIEERVTRAKHLQLMGGLSPTLYWLGNFLWDMCNYLVPACIVVLIFLAFQQRAYVAPANLPALLLLLLLYGWSITPLMYPASFFFSVPSTAYVVLTCINLFIGINGSMATFVLELF--SDQKLQEVSRILKQVFLIFPHFCLGRGLIDMVRNQAMADAFERLGDRQFQSPLRWEVVGKNL-----------LAMVIQGPLFLLFTLLLQHRSQLLPQPRVRSLPLLGEEDEDVARERERVVQGATQGDVLVLRNLTKVY------------RGQ--------RMPAVDRLCLGIPPGECFGLLGVNGAGKTSTF 1837 HSP 2 Score: 169.088 bits (427), Expect = 4.043e-41 Identity = 98/318 (30.82%), Postives = 157/318 (49.37%), Query Frame = 1 Query: 2218 IHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 + NL K+Y ++P ++ L L + LG NGAGKT+T ++TG S G A + + E + +G CPQ + +F+ LT +H+ L+ + + ++ + + L+ + + SGG KRKL+ A+A +G+ VVFLDEPT G+DP ARR +W+ L+ R+++LT+H M+E + L R+AI+ G+ +C GS LK +F G+ L+L + FV A + E + LP + +F L H AE + + +S T LEEVFL + D Sbjct: 1795 LRNLTKVYRGQRMPAVDRLCLGIPPGECFGLLGVNGAGKTSTFRMVTGDTLASRGEAVLAGHSVAREPSAAHLSMGYCPQSDAIFELLTGREHLELLARLRGVPEAQVAQTAGSGLARLGLSWYADRPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLAVVREGRSVMLTSHSMEECEALCSRLAIMVNGRFRCLGSPQHLKGRFAAGHTLTLRVPAARSQPAA-------AFVAAEFPGAELREAHGGRLRFQLPPGGRCA--LARVFGELAVHGAEHGVEDFSVSQTMLEEVFLYFSKD 2103 HSP 3 Score: 70.8626 bits (172), Expect = 3.156e-11 Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 25 NQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQ 264 QL LLWKNF +RR+ LL+EL PL + FIL AVR S + C F K + S G +P+L +C N +C+ Q Sbjct: 5 TQLMLLLWKNFMYRRRQPVQLLVELLWPLFLFFILVAVRHSHPPLEHHECHFPNKPLPSAGTVPWLQGLICNVNNTCFPQ 84
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Human
Match: ABCA4 (ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]) HSP 1 Score: 777.319 bits (2006), Expect = 0.000e+0 Identity = 538/1733 (31.04%), Postives = 880/1733 (50.78%), Query Frame = 1 Query: 523 LGEIICGSPE--------------NDFKLFMRNFIKNQRR-------KRSLLTCQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLR--------LASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSW-------------IERGLNCTELDRFIPLDSLKDIDKLTNQSFR-----NFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYN----------IKSSESIPLMRNNNQNCEINHQAF-ESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXX--------------------------------XILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLI-------NKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQK-----QSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWSPASILDIPMV-----------SPECDCSK----TGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSR-----------KLYGGFQF-----VLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSL-KFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEM--EQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYN---SNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESG-IVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 L +++CG PE N++K F+ I + R+ +R+ C + QS N + K + PL+ GK+ Y P+ R+I++ AN TF+ L+++R + W + ++ I + + VK F +A+ +S D ++ F W + + L C LD+F +S D +LT ++ F A ++F + + + T + Y+IR+ + ++ T K K DR+W PR + DF+Y+ GF +LQ+ ++Q E+ VG + MPYPC++ D F+ L P +V+AW SV++ +KSIV EKE RLKE +K G++N V W +WF+ + ++ + + ++++ + +I S ++F + + + I F++S FFSKA++A+ G++YFT Y+ ++ + ++ + + LLS VAF ++++ +E+ G+Q+SN+ +P E F + +M++D+ +Y L+ WY++ VFPG YG PW FL SYW+ ++ +E + + ++ E H +F E E G+ + NLVK++ P ++ LN+ FYE+QITAFLGHNGAGKTTT+SILTG+ P+SGT + DI T +D++RQ +G+CPQ+N+LF LTV +H+ FY LK + E + + +++D L K N + LSGGM+RKLS+A+AF+G+++VV LDEPT+GVDP++RR IWDLL+KYRS RTII++THHMDEAD L DR+AII+QG+L C G+ +FLK FG G YL+L++ N + + E ++ V ++ +A+++E + +LP + R + LF+ L++ +A++ + S+G+SDT LEE+FLKV +D + + +E + C + K + + P + L G L+ Q + AL +KR+ + R K FLA+++LP + ++ + + + + PW+ + TF+ + L + G G RC+ L Y C N +P+ +I + SP C CS T C + +GG P R S++ L +LT NISD+L+K +P L R + YGG V+P T L+G F +L +N S + + F+ +L+ I ++W N+KG+ ++ ++ N+ N +LR+ L K +YGI+V + P+ + EQ ++ L ++ +AI VIF +SF+PASFV++L++ERV+ SK QF+SG++P YWV+NFLWDIM Y + +++ IFI F ++Y +N A + LL+ YG A+IP MYP SF PSTA+V L+ NL +G ++ TFIL++ E N L+ N +L+K+ ++FP F LGRG++DL + + +H N WD+ G+ LF++ + ++++ ++++ +++ I K + ED DV ER+R+ + D+LR+ LTKIY AV+ LC GVR GECFGLLGVNGAGKTTTF Sbjct: 319 LSDLLCGYPEGGGSRVLSFNWYEDNNYKAFLG--IDSTRKDPIYSYDRRTTSFCNALIQSLESNPLTKI-AWRAAKPLLMGKILYTPDSPAARRILKNANSTFEELEHVRKLVKAWEEVGPQIWYFFDNSTQMNMIRDTLGNPTVKDFLNRQLGEEGITAEAILNFLYKGPRESQADDMAN-FDWRDIFNITDRTLRLVNQYLECLVLDKF---ESYNDETQLTQRALSLLEENMFWAGVVFPDMYPW-TSSLPPHVKYKIRMDIDVVEKTNKIK--DRYWDSGPRADPVEDFRYIWGGFAYLQDMVEQGITRSQVQAEA-PVGIYLQQMPYPCFVDDSFMIILNRCFPIFMVLAWIYSVSMTVKSIVLEKELRLKETLKNQGVSNAVIWCTWFLDSFSIMSMSIFLLTIFIMHGRILHYSDPFILFLFLLAFSTATIMLCFLLSTFFSKASLAAACSGVIYFTLYLPHILCFAWQDRMTAELKKAVSLLSPVAFGFGTEYLVRFEEQGLGLQWSNIGNSPTEGDEFSFLLSMQMMLLDAAVYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPLTEETEDPEHPEGIHDSFFEREHPGWVPGVCVKNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKYRS-GRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGTPLFLKNCFGTGLYLTLVRKMKNIQSQRKGSEGTCSCSSKGFSTTCPAHVDDLTPEQVLDGDVNELMDVVLHHVPEAKLVECIGQELIFLLPNKNFKHRAYASLFRELEETLADLGLSSFGISDTPLEEIFLKVTEDSDSGPLFAGGAQQKRENVNPRHPCLGPREKAGQTPQDSNVCSPGAPAAHPEGQPPPEPECPGPQLNTGTQLVLQHVQALLVKRFQHTIRSHKDFLAQIVLPATFVFLALMLSIVIPPFGEYPALTLHPWIYGQQY------TFFSMDEPGSEQFTVLADVLLNKPG-FGNRCLKEGW--LPEYPC--GNSTPWKTPSVSPNITQLFQKQKWTQVNPSPSCRCSTREKLTMLPECPE-GAGGLPPPQRTQRSTEILQDLTDRNISDFLVKTYPALIRSSLKSKFWVNEQRYGGISIGGKLPVVPIT---GEALVG---FLSDLGRIMNVSGGPITREASKEIPDFLKHLETEDNI--------KVWFNNKGWHALVSFLNVAHNAILRASLPKDRSPE-EYGITVISQPLNLTKEQLSEITVLTTS--VDAVVAICVIFSMSFVPASFVLYLIQERVNKSKHLQFISGVSPTTYWVTNFLWDIMNYSVSAGLVVGIFIGFQKKAYTSPENLPALVALLLLYGWAVIPMMYPASFLFDVPSTAYVALSCANLFIGINSSAITFILELFENNRTLLR-FNAVLRKLLIVFPHFCLGRGLIDLALSQAVTDVYARFGEEHSANPFHWDLIGKNLFAMVVEGVVYFLLTLLVQRHFFLSQWIAEPTKEPIVD-------EDDDVAEERQRIITGGNKTDILRLHELTKIY--------------------PGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTF 1982 HSP 2 Score: 189.119 bits (479), Expect = 2.941e-47 Identity = 105/310 (33.87%), Postives = 164/310 (52.90%), Query Frame = 1 Query: 1966 VGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGY 2895 +G + M+++ +Y L+T V+ F FL S W I P++ ++ E + N + +H L K+YP P ++ L + + LG NGAGKTTT +LTG + +SG A + + I T + + Q +G CPQ++ + + LT +H+Y Y L+ + EIE V IK + LT + L+ SGG KRKLS A+A IG +V LDEPT G+DP ARR +W++++ R ++LT+H M+E + L R+AI+ +G +C G++ LK KFG+GY Sbjct: 1875 IGKNLFAMVVEGVVYFLLTLLVQRHF-----------FL---SQW---IAEPTKEPIVDEDDDVAEERQRIITGG--NKTDILRLHELTKIYPGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISEVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFRCMGTIQHLKSKFGDGY 2165 HSP 3 Score: 57.3806 bits (137), Expect = 3.161e-7 Identity = 26/77 (33.77%), Postives = 42/77 (54.55%), Query Frame = 1 Query: 28 QLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY 258 Q++ LLWKN+ L++R+ ++EL PL + +L +R++ Y C F K M S G +P+L C N C+ Sbjct: 6 QIQLLLWKNWTLRKRQKIRFVVELVWPLSLFLVLIWLRNANPLYSHHECHFPNKAMPSAGMLPWLQGIFCNVNNPCF 82
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Human
Match: ABCA12 (ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]) HSP 1 Score: 645.966 bits (1665), Expect = 0.000e+0 Identity = 494/1615 (30.59%), Postives = 813/1615 (50.34%), Query Frame = 1 Query: 670 MYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEW---------RLHFQTFLLDYISN---NVFINDVKKFCKAYYSANP-KICDAVNTL-FNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSFRNFLAVIIFNETFQYLTPKNTTF--------------LSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIP-----------LMRNNNQNCEINH---QAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLK--RMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXX--XXXILKFVKIYIADARMMEESRLQWTIVLPQNDIN-SRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPM-NKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHLL------KGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISL-GLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWSPASILDIPMVS-PECDCSKTGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTIS---TFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDL--------FFNYFYNSNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVN--RIICGKLKNSYLKRIEIRNT--EDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 ++ L P++ G++ Y P + + I+EK+N+T + L LR S EW H + + N N F+ KF + K D ++ L + N ID ++ L S +C DR + + K ID++ ++ R + + +F + P N ++ + Y IR+ L +T + + W P P N+ + + FI+LQ++I++A IEL T S E+ + +PYPC++ D FL ++ LP +L++AW + +K +VYEK+ RL EYMK+MG+N+ H+ +W I ++ L++ +VI+ + L+ I ++ ++F Y S I ++++SVFF+ N+A++ G ++Y + F+V + +E ELS + LLS AFS A +++ +E+ G+Q+ N++ +P + G L++ DSFIY LI WYV VFPG YG+A PW F SYW +E P +M+N N + + E EP++L +G+++H + K+Y S ++NLNLNFYE IT+ LG NGAGKTTTIS+LTG+F S+GT ++ +DI+T++ ++R+ +G+C Q++VLF LT ++H+ YG +K K ++ + R +KD L + LSGGMKRKLSI++A IG SRVV LDEP+ GVDP +RR IWD++ K ++ RTIIL+THH+DEA+ LSDR+A + QG L+CCGS +LK FG+GY+L+L K ++ + N+N + ++ ++ +A + E+ + VLP S + L + LD M +++I YG+SDT++EEVFL + + N ++ E L K N+ I + S F D+ D +L GF LL ++I+A+ IKR+H+ +R++KG +A++ILP++ + + + +QISP L G FY + S L++ + D C+N S + QC ++ W+ + P+ + C CS+ Q C P +R SS + NLTG + +YL+ + +K YGG+ F LP T ++LR + AN + ++W + +GY S+PAY N +N LLR ++K +GI + + P Q + + + ++++ +A+ ++ G S ASFV ++V E + +K+ Q +SGI YWV+NF++D++ Y++P+ I I F ++ N A LLL+ +G A MY + AF+ NL G + +S + L + N L+ I++ LK++FLIFPQF G G+++L F + V++ + + G +L S ++ + ++I ++ R+ K +S+ +R T ED DV ER R+ S D++++ LTK Y + K + +AVNN+ G+ GECFGLLGVNGAGKTT F Sbjct: 479 IWAFLKPMLLGRILYAPYNPVTKAIMEKSNVTLRQLAELREKSQEWMDKSPLFMNSFHLLNQAIPMLQNTLRNPFVQVFVKFSVGLDAVELLKQIDELDILRLKLENNIDIIDQLNTLSSLTVNISSCVLYDR---IQAAKTIDEMEREAKRLYKSNELFGSVI-FKLPSNRSWHRGYDSGNVFLPPVIKYTIRMSLKTAQTTRSLRT--KIWAPGPH-NSPSHNQIYGRAFIYLQDSIERAIIELQTGRNSQEIAVQVQAIPYPCFMKDNFLTSVSYSLPIVLMVAWVVFIAAFVKKLVYEKDLRLHEYMKMMGVNSCSHFFAWLIESVGFLLVTIVILIIILKFGNILPKTNGFILFLYFSDYSFSVIAMSYLISVFFNNTNIAALIGSLIYIIAFFPFIVLVTVENELSYVLKVFMSLLSPTAFSYASQYIARYEEQGIGLQWENMYTSPVQDDTTSFGWLCCLILADSFIYFLIAWYVRNVFPGTYGMAAPWYFPILPSYWKERFGCAEVKPEKSNGLMFTNIMMQNTNPSASPEYMFSSNIEPEPKDLTVGVALHGVTKIYGSKV--AVDNLNLNFYEGHITSLLGPNGAGKTTTISMLTGLFGASAGTIFVYGKDIKTDLHTVRKNMGVCMQHDVLFSYLTTKEHLLLYGSIKVPHWTKKQLHEEVKRTLKDTGLYSHRHKRVGTLSGGMKRKLSISIALIGGSRVVILDEPSTGVDPCSRRSIWDVISKNKT-ARTIILSTHHLDEAEVLSDRIAFLEQGGLRCCGSPFYLKEAFGDGYHLTLTKKKSPNLNANAVCDTMAVTAMIQSHLPEAYLKEDIGGELVYVLPPFSTKVSGAYLSLLRALDNGMGDLNIGCYGISDTTVEEVFLNLTKESQKNSAMSLEH---------LTQKKIGNSNANGISTPDDLSVSSSNFTDRDDKILTRGERLDGFGLLLKKIMAILIKRFHHTRRNWKGLIAQVILPIVFVTTAMGLGTLRNSSNSYPEIQISPSLY----GTSEQTAFYANYHPSTEALVSAMW-----DFPGIDNMCLNTS-----DLQCLNKDSLEKWNTSGE---PITNFGVCSCSEN-VQECPKFNYSPP---HRRTYSSQVIYNLTGQRVENYLISTANEFVQKRYGGWSFGLPLT--------------KDLRFDITGVPANR-------------------------TLAKVWYDPEGYHSLPAYLNSLNNFLLRVNMSKYDAA--RHGIIMYSHPYPGVQDQEQATISS--LIDILVALSILMGYSVTTASFVTYVVREHQTKAKQLQHISGIGVTCYWVTNFIYDMVFYLVPVAFSIGIIAIFKLPAFYSENNLGAVSLLLLLFGYATFSWMYLLAGLFHETGMAFITYVCVNLFFGINSIVSLSVVYFLSKEKPNDPTLELISETLKRIFLIFPQFCFGYGLIELSQQQSVLDFLKAYG-----VEYPNETFEMNKLGAMFVALVSQGTMFFSLRLLINESLIKKLRLFFRKFNSSH-----VRETIDEDEDVRAERLRVESGAAEFDLVQLYCLTKTYQLIHK------------------KIIAVNNISIGIPAGECFGLLGVNGAGKTTIF 1982 HSP 2 Score: 176.407 bits (446), Expect = 2.060e-43 Identity = 107/324 (33.02%), Postives = 177/324 (54.63%), Query Frame = 1 Query: 2212 ISIHNLVKLYP--SNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIR-TEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTE-KINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 + ++ L K Y KI +NN+++ + LG NGAGKTT +LTG PSSG I N+ +DS +G CPQ + L D +TVE+H+YFY + + + +I+ + ++++ + L K A SM S G KRKLS A+A IG ++ LDEP++G+DP ++R +W ++ + + ++ILT+H M+E + L R+AI+ GK QC GSL +K +FG G+ + + N + L F K Y+ D + S L++ + + + +F L+ + ++I ++ +S T+LEEVF+ A D Sbjct: 1936 VQLYCLTKTYQLIHKKIIAVNNISIGIPAGECFGLLGVNGAGKTTIFKMLTGDIIPSSGNILIRNKTGSLGHVDSHSSLVGYCPQEDALDDLVTVEEHLYFYARVHGIPEKDIKETVHKLLRRLHLMPFKDRATSM-CSYGTKRKLSTALALIGKPSILLLDEPSSGMDPKSKRHLWKIISEEVQNKCSVILTSHSMEECEALCTRLAIMVNGKFQCIGSLQHIKSRFGRGFTVKVHLKNNKVTMETLTKFMQLHFPKTYLKDQHL---SMLEYHV-----PVTAGGVANIFDLLETNKTALNITNFLVSQTTLEEVFINFAKD 2250
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Human
Match: ABCA12 (ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]) HSP 1 Score: 645.195 bits (1663), Expect = 0.000e+0 Identity = 497/1619 (30.70%), Postives = 816/1619 (50.40%), Query Frame = 1 Query: 670 MYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEW---------RLHFQTFLLDYISN---NVFINDVKKFCKAYYSANP-KICDAVNTL-FNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSFRNFLAVIIFNETFQYLTPKNTTF--------------LSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIP-----------LMRNNNQNCEINH---QAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLK--RMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXX--XXXILKFVKIYIADARMMEESRLQWTIVLPQNDIN-SRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPM-NKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHLL------KGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISL-GLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWSPASILDIPMVS-PECDCSKTGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPI----EMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTIS---TFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDL--------FFNYFYNSNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVN--RIICGKLKNSYLKRIEIRNT--EDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 ++ L P++ G++ Y P + + I+EK+N+T + L LR S EW H + + N N F+ KF + K D ++ L + N ID ++ L S +C DR + + K ID++ ++ R + + +F + P N ++ + Y IR+ L +T + + W P P N+ + + FI+LQ++I++A IEL T S E+ + +PYPC++ D FL ++ LP +L++AW + +K +VYEK+ RL EYMK+MG+N+ H+ +W I ++ L++ +VI+ + L+ I ++ ++F Y S I ++++SVFF+ N+A++ G ++Y + F+V + +E ELS + LLS AFS A +++ +E+ G+Q+ N++ +P + G L++ DSFIY LI WYV VFPG YG+A PW F SYW +E P +M+N N + + E EP++L +G+++H + K+Y S ++NLNLNFYE IT+ LG NGAGKTTTIS+LTG+F S+GT ++ +DI+T++ ++R+ +G+C Q++VLF LT ++H+ YG +K K ++ + R +KD L + LSGGMKRKLSI++A IG SRVV LDEP+ GVDP +RR IWD++ K ++ RTIIL+THH+DEA+ LSDR+A + QG L+CCGS +LK FG+GY+L+L K ++ + N+N + ++ ++ +A + E+ + VLP S + L + LD M +++I YG+SDT++EEVFL + + N ++ E L K N+ I + S F D+ D +L GF LL ++I+A+ IKR+H+ +R++KG +A++ILP++ + + + +QISP L G FY + S L++ + D C+N S + QC ++ W+ + P+ + C CS+ Q C P +R SS + NLTG + +YL+ + +K YGG+ F LP T ++LR + AN + ++W + +GY S+PAY N +N LLR ++K +GI + + P + EQ+T ++ +I ++ +A+ ++ G S ASFV ++V E + +K+ Q +SGI YWV+NF++D++ Y++P+ I I F ++ N A LLL+ +G A MY + AF+ NL G + +S + L + N L+ I++ LK++FLIFPQF G G+++L F + V++ + + G +L S ++ + ++I ++ R+ K +S+ +R T ED DV ER R+ S D++++ LTK Y + K + +AVNN+ G+ GECFGLLGVNGAGKTT F Sbjct: 797 IWAFLKPMLLGRILYAPYNPVTKAIMEKSNVTLRQLAELREKSQEWMDKSPLFMNSFHLLNQAIPMLQNTLRNPFVQVFVKFSVGLDAVELLKQIDELDILRLKLENNIDIIDQLNTLSSLTVNISSCVLYDR---IQAAKTIDEMEREAKRLYKSNELFGSVI-FKLPSNRSWHRGYDSGNVFLPPVIKYTIRMSLKTAQTTRSLRT--KIWAPGPH-NSPSHNQIYGRAFIYLQDSIERAIIELQTGRNSQEIAVQVQAIPYPCFMKDNFLTSVSYSLPIVLMVAWVVFIAAFVKKLVYEKDLRLHEYMKMMGVNSCSHFFAWLIESVGFLLVTIVILIIILKFGNILPKTNGFILFLYFSDYSFSVIAMSYLISVFFNNTNIAALIGSLIYIIAFFPFIVLVTVENELSYVLKVFMSLLSPTAFSYASQYIARYEEQGIGLQWENMYTSPVQDDTTSFGWLCCLILADSFIYFLIAWYVRNVFPGTYGMAAPWYFPILPSYWKERFGCAEVKPEKSNGLMFTNIMMQNTNPSASPEYMFSSNIEPEPKDLTVGVALHGVTKIYGSKV--AVDNLNLNFYEGHITSLLGPNGAGKTTTISMLTGLFGASAGTIFVYGKDIKTDLHTVRKNMGVCMQHDVLFSYLTTKEHLLLYGSIKVPHWTKKQLHEEVKRTLKDTGLYSHRHKRVGTLSGGMKRKLSISIALIGGSRVVILDEPSTGVDPCSRRSIWDVISKNKTA-RTIILSTHHLDEAEVLSDRIAFLEQGGLRCCGSPFYLKEAFGDGYHLTLTKKKSPNLNANAVCDTMAVTAMIQSHLPEAYLKEDIGGELVYVLPPFSTKVSGAYLSLLRALDNGMGDLNIGCYGISDTTVEEVFLNLTKESQKNSAMSLEH---------LTQKKIGNSNANGISTPDDLSVSSSNFTDRDDKILTRGERLDGFGLLLKKIMAILIKRFHHTRRNWKGLIAQVILPIVFVTTAMGLGTLRNSSNSYPEIQISPSLY----GTSEQTAFYANYHPSTEALVSAMW-----DFPGIDNMCLNTS-----DLQCLNKDSLEKWNTSGE---PITNFGVCSCSE-NVQECPKFNYSPP---HRRTYSSQVIYNLTGQRVENYLISTANEFVQKRYGGWSFGLPLT--------------KDLRFDITGVPANR-------------------------TLAKVWYDPEGYHSLPAYLNSLNNFLLRVNMSKYDAA--RHGIIMYSHPYPGVQDQEQAT-----ISSLI-DILVALSILMGYSVTTASFVTYVVREHQTKAKQLQHISGIGVTCYWVTNFIYDMVFYLVPVAFSIGIIAIFKLPAFYSENNLGAVSLLLLLFGYATFSWMYLLAGLFHETGMAFITYVCVNLFFGINSIVSLSVVYFLSKEKPNDPTLELISETLKRIFLIFPQFCFGYGLIELSQQQSVLDFLKAYG-----VEYPNETFEMNKLGAMFVALVSQGTMFFSLRLLINESLIKKLRLFFRKFNSSH-----VRETIDEDEDVRAERLRVESGAAEFDLVQLYCLTKTYQLIHK------------------KIIAVNNISIGIPAGECFGLLGVNGAGKTTIF 2300 HSP 2 Score: 176.792 bits (447), Expect = 1.903e-43 Identity = 107/324 (33.02%), Postives = 177/324 (54.63%), Query Frame = 1 Query: 2212 ISIHNLVKLYP--SNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIR-TEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTE-KINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 + ++ L K Y KI +NN+++ + LG NGAGKTT +LTG PSSG I N+ +DS +G CPQ + L D +TVE+H+YFY + + + +I+ + ++++ + L K A SM S G KRKLS A+A IG ++ LDEP++G+DP ++R +W ++ + + ++ILT+H M+E + L R+AI+ GK QC GSL +K +FG G+ + + N + L F K Y+ D + S L++ + + + +F L+ + ++I ++ +S T+LEEVF+ A D Sbjct: 2254 VQLYCLTKTYQLIHKKIIAVNNISIGIPAGECFGLLGVNGAGKTTIFKMLTGDIIPSSGNILIRNKTGSLGHVDSHSSLVGYCPQEDALDDLVTVEEHLYFYARVHGIPEKDIKETVHKLLRRLHLMPFKDRATSM-CSYGTKRKLSTALALIGKPSILLLDEPSSGMDPKSKRHLWKIISEEVQNKCSVILTSHSMEECEALCTRLAIMVNGKFQCIGSLQHIKSRFGRGFTVKVHLKNNKVTMETLTKFMQLHFPKTYLKDQHL---SMLEYHV-----PVTAGGVANIFDLLETNKTALNITNFLVSQTTLEEVFINFAKD 2568
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Celegans
Match: abt-2 (ABC Transporter family [Source:UniProtKB/TrEMBL;Acc:Q1RS86]) HSP 1 Score: 386.726 bits (992), Expect = 7.278e-109 Identity = 233/620 (37.58%), Postives = 361/620 (58.23%), Query Frame = 1 Query: 1006 NCTELDRFIPLDSLKDIDKLTNQSFRNFLAVIIFNETFQYLT------PKNTT----FLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQ 2835 C LDRF + K+++ TN + +T QY T N T F +Y+IR +DST F +D P+ R D KY+ GF FLQE+ID+A + +TN +G PYPC + D F +A +P L++++ +L+K+IVYEKE ++KE M+ MGL + VH++SW + ++V+ I V+I+S+ +++KI + ++ V+ ++ S I + S F+ AN+A+ + +L+F F++ F + ++ + S T +L A + K + + + E +S+L++ L V C+I++++D+ ++L++ WY+ AV PG +GV +P F YW + + + + + + + N +F+SEP NL L + I+++ K+Y N ++ LNL YE QIT LGHNGAGKTTT+SIL G+++PSSGTA I DIRT++ +R +G+CPQ+NVLF LTV + + + LK + +E+ S + I+ V LTEK N L+ LSGGMKR+L I +AFIG SR V LDEPTAGVD AR+ IW LL + + RTI+L+THHMDEAD LSDR+AI+SQ Sbjct: 534 GCFLLDRFRFVTDEKELE--TN--------AVCLMDTHQYFTGIVFNIDSNATEFDGFTTYKIRHYPEMVDSTTSF--MDSKSNPFSRDKPLIDLKYITFGFSFLQESIDRAIMSELTNQTDANLGVYAQQEPYPCTVKDTF--NVALFMPLFLLISFIFPSALLVKNIVYEKEQKIKEQMRAMGLGDAVHFISWGLISLVLNFISVLIISIISKVAKIFDYTDYTLLLFVLILFLFSSIAMSIFFSTLFTNANIATAATCVLWFVFFIPFQL-LRTDRISSPTFNRISLILPPTAMGHCFKLLESFNAM-ERATWSDLWEMNNPVLGISVELCMIMLVVDTAVFLILAWYISAVAPGDFGVRQPLWFPFTLKYWAPGLYKNR-VEFVDDEHFDTIPNSDSFDSEPTNLTLAVHINSMSKVY-ENGTKALDCLNLRLYEGQITGLLGHNGAGKTTTMSILCGLYAPSSGTAKIYQRDIRTDLRRVRDVLGICPQHNVLFSHLTVSEQLRLFAALKGVPDSELTSQVDEILASVSLTEKANKLASTLSGGMKRRLCIGIAFIGGSRFVILDEPTAGVDVTARKDIWKLLQRNK-EGRTILLSTHHMDEADVLSDRIAILSQ 1134 HSP 2 Score: 148.673 bits (374), Expect = 2.074e-35 Identity = 73/228 (32.02%), Postives = 134/228 (58.77%), Query Frame = 1 Query: 2218 IHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRT-EMDSIR--QKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEG 2892 + NL K Y + ++ + ++ + LG NGAGKTTT ++LT P G+ + N I T +R Q++G CPQ++ L L+ +++ FY ++ + +I+S++ R++ + L N + LSGG +RKLS+A+A + ++FLDEP+AG+DP +++ +W ++ + + ++LT+H M+E + L R+AI+ +G+++C G LK K+G+G Sbjct: 1804 VRNLAKAY-NPELLAVKGISFAVEPGECFGLLGLNGAGKTTTFAMLTAKIRPGHGSIEMQNTRINTGSFSDVRNFQQLGYCPQFDALNMKLSTRENLKFYARIRGIVPTQIDSIIDRLLIALHLRPYANTQTSSLSGGNRRKLSVAVALVSQPSLIFLDEPSAGMDPGSQQFLWKVIERLCKSGKAVVLTSHSMEECEALCTRIAIMDRGRIRCLGGKQHLKSKYGKG 2030 HSP 3 Score: 124.79 bits (312), Expect = 4.574e-28 Identity = 150/532 (28.20%), Postives = 244/532 (45.86%), Query Frame = 1 Query: 3835 MTSSDKLNNLTGYNISDY-LLKNFPKLSRK----LYGGFQFVLPSTFGWSSKLIGDSP--FWEELRDFVNASQA-NHNQSNLN--SLKFIDYLQKTFKIYGIKTSF---------TRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIF----VIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYIC-SKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLG----RGIM--------DLFFNYFYNSNSIVKHEYNA-LQWDIAGEKLFSLFSLSIGWWIVLI---IIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSS---DQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 + ++D++ +LTG N++ + L+ F +L+ GGF + S I S + E ++D + + N N + + + K +D + + + ++W N+K + P +NI SN LLR A+ D GI N P+ S + LD N + +LA+F ++ LS IPA F ++LVE+R+ + Q V G+ YWV+++L+D++ Y + II+I++I++ F + AF+LL +G++ I + Y F S + +FV++ + VG + ++ +L+ L V L + + VFL+ PQ+NLG RG+M F + I + + L +D G + LF I I LI + E G V R L ++ + R E +D DV ER+R+ + D + L V NL K YN L +AV + F V GECFGLLG+NGAGKTTTF Sbjct: 1341 LNTTDRIFDLTGRNLTQFRLITRFAQLANTTAPFFLGGFSLGHVNQRAQSQADIDTSKRGWLETIKDIAQSMRIINLNTTGIEPATPKVLDPFAQNITLNQVVNDLLQNLDVRENVKVWFNNKIWPGFPIASNILSNALLRQEDY--AIDPEDLGILTMNHPMNKTIS-QTLD-QNALKFTQALAVFRITILLLVLSMIPAGFTVYLVEDRICEALHLQLVGGLRKVTYWVTSYLYDMVVYTLVIIVIMLIYLCFRVSDFTADGATFFAFLLLFFVHGMSTILYAYVFQKAFSVAALSFVLIAIGSYFVGIVCALTVIMLESLMVQDPSLIPAHTVCSIVFLVLPQYNLGIAIFRGLMIYQVRAIGSNFLQQMNRPDMINQLPLPSLLAFDQMGIHIMCLFIHVIIATICLIFSQMDEFGFV-RKRERNLTDAMMLR-EPSTCDDEDVVKERQRVDAIPMDSSDNHALIVRNLAKAYNPEL---------------------LAVKGISFAVEPGECFGLLGLNGAGKTTTF 1845 HSP 4 Score: 60.8474 bits (146), Expect = 1.223e-8 Identity = 42/144 (29.17%), Postives = 66/144 (45.83%), Query Frame = 1 Query: 28 QLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQTQINWLGTNLNEFHVFIGNITE-------IYNSLPSGALNVPKFMKWITSNPNEFIRLQNSFSYI 438 QL LLWK ++RR+ L +EL VP I+ I+ VR+ C + K M+S G +PF+ F C+F+ C N T +E H + E I +++ +L ++WI +NP +F L + I Sbjct: 44 QLNFLLWKCVLVRRRQKFWLAVELIVPCILFIIIALVRTKDFSEASPQCHYDSKGMLSAGVLPFIHSFFCSFSNRC------NAAPTTGDEKHFLFNDDGEHTRNESIIVDAIYYSSLQ----LRWIGNNPKKFEDLTKGAAEI 177
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Celegans
Match: abt-2 (ABC Transporter family [Source:UniProtKB/TrEMBL;Acc:Q1RS86]) HSP 1 Score: 386.726 bits (992), Expect = 8.630e-109 Identity = 233/620 (37.58%), Postives = 361/620 (58.23%), Query Frame = 1 Query: 1006 NCTELDRFIPLDSLKDIDKLTNQSFRNFLAVIIFNETFQYLT------PKNTT----FLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQ 2835 C LDRF + K+++ TN + +T QY T N T F +Y+IR +DST F +D P+ R D KY+ GF FLQE+ID+A + +TN +G PYPC + D F +A +P L++++ +L+K+IVYEKE ++KE M+ MGL + VH++SW + ++V+ I V+I+S+ +++KI + ++ V+ ++ S I + S F+ AN+A+ + +L+F F++ F + ++ + S T +L A + K + + + E +S+L++ L V C+I++++D+ ++L++ WY+ AV PG +GV +P F YW + + + + + + + N +F+SEP NL L + I+++ K+Y N ++ LNL YE QIT LGHNGAGKTTT+SIL G+++PSSGTA I DIRT++ +R +G+CPQ+NVLF LTV + + + LK + +E+ S + I+ V LTEK N L+ LSGGMKR+L I +AFIG SR V LDEPTAGVD AR+ IW LL + + RTI+L+THHMDEAD LSDR+AI+SQ Sbjct: 497 GCFLLDRFRFVTDEKELE--TN--------AVCLMDTHQYFTGIVFNIDSNATEFDGFTTYKIRHYPEMVDSTTSF--MDSKSNPFSRDKPLIDLKYITFGFSFLQESIDRAIMSELTNQTDANLGVYAQQEPYPCTVKDTF--NVALFMPLFLLISFIFPSALLVKNIVYEKEQKIKEQMRAMGLGDAVHFISWGLISLVLNFISVLIISIISKVAKIFDYTDYTLLLFVLILFLFSSIAMSIFFSTLFTNANIATAATCVLWFVFFIPFQL-LRTDRISSPTFNRISLILPPTAMGHCFKLLESFNAM-ERATWSDLWEMNNPVLGISVELCMIMLVVDTAVFLILAWYISAVAPGDFGVRQPLWFPFTLKYWAPGLYKNR-VEFVDDEHFDTIPNSDSFDSEPTNLTLAVHINSMSKVY-ENGTKALDCLNLRLYEGQITGLLGHNGAGKTTTMSILCGLYAPSSGTAKIYQRDIRTDLRRVRDVLGICPQHNVLFSHLTVSEQLRLFAALKGVPDSELTSQVDEILASVSLTEKANKLASTLSGGMKRRLCIGIAFIGGSRFVILDEPTAGVDVTARKDIWKLLQRNK-EGRTILLSTHHMDEADVLSDRIAILSQ 1097 HSP 2 Score: 148.673 bits (374), Expect = 2.220e-35 Identity = 73/228 (32.02%), Postives = 134/228 (58.77%), Query Frame = 1 Query: 2218 IHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRT-EMDSIR--QKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEG 2892 + NL K Y + ++ + ++ + LG NGAGKTTT ++LT P G+ + N I T +R Q++G CPQ++ L L+ +++ FY ++ + +I+S++ R++ + L N + LSGG +RKLS+A+A + ++FLDEP+AG+DP +++ +W ++ + + ++LT+H M+E + L R+AI+ +G+++C G LK K+G+G Sbjct: 1767 VRNLAKAY-NPELLAVKGISFAVEPGECFGLLGLNGAGKTTTFAMLTAKIRPGHGSIEMQNTRINTGSFSDVRNFQQLGYCPQFDALNMKLSTRENLKFYARIRGIVPTQIDSIIDRLLIALHLRPYANTQTSSLSGGNRRKLSVAVALVSQPSLIFLDEPSAGMDPGSQQFLWKVIERLCKSGKAVVLTSHSMEECEALCTRIAIMDRGRIRCLGGKQHLKSKYGKG 1993 HSP 3 Score: 124.405 bits (311), Expect = 5.756e-28 Identity = 150/532 (28.20%), Postives = 244/532 (45.86%), Query Frame = 1 Query: 3835 MTSSDKLNNLTGYNISDY-LLKNFPKLSRK----LYGGFQFVLPSTFGWSSKLIGDSP--FWEELRDFVNASQA-NHNQSNLN--SLKFIDYLQKTFKIYGIKTSF---------TRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIF----VIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYIC-SKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLG----RGIM--------DLFFNYFYNSNSIVKHEYNA-LQWDIAGEKLFSLFSLSIGWWIVLI---IIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSS---DQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 + ++D++ +LTG N++ + L+ F +L+ GGF + S I S + E ++D + + N N + + + K +D + + + ++W N+K + P +NI SN LLR A+ D GI N P+ S + LD N + +LA+F ++ LS IPA F ++LVE+R+ + Q V G+ YWV+++L+D++ Y + II+I++I++ F + AF+LL +G++ I + Y F S + +FV++ + VG + ++ +L+ L V L + + VFL+ PQ+NLG RG+M F + I + + L +D G + LF I I LI + E G V R L ++ + R E +D DV ER+R+ + D + L V NL K YN L +AV + F V GECFGLLG+NGAGKTTTF Sbjct: 1304 LNTTDRIFDLTGRNLTQFRLITRFAQLANTTAPFFLGGFSLGHVNQRAQSQADIDTSKRGWLETIKDIAQSMRIINLNTTGIEPATPKVLDPFAQNITLNQVVNDLLQNLDVRENVKVWFNNKIWPGFPIASNILSNALLRQEDY--AIDPEDLGILTMNHPMNKTIS-QTLD-QNALKFTQALAVFRITILLLVLSMIPAGFTVYLVEDRICEALHLQLVGGLRKVTYWVTSYLYDMVVYTLVIIVIMLIYLCFRVSDFTADGATFFAFLLLFFVHGMSTILYAYVFQKAFSVAALSFVLIAIGSYFVGIVCALTVIMLESLMVQDPSLIPAHTVCSIVFLVLPQYNLGIAIFRGLMIYQVRAIGSNFLQQMNRPDMINQLPLPSLLAFDQMGIHIMCLFIHVIIATICLIFSQMDEFGFV-RKRERNLTDAMMLR-EPSTCDDEDVVKERQRVDAIPMDSSDNHALIVRNLAKAYNPEL---------------------LAVKGISFAVEPGECFGLLGLNGAGKTTTF 1808 HSP 4 Score: 60.4622 bits (145), Expect = 1.327e-8 Identity = 42/144 (29.17%), Postives = 66/144 (45.83%), Query Frame = 1 Query: 28 QLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQTQINWLGTNLNEFHVFIGNITE-------IYNSLPSGALNVPKFMKWITSNPNEFIRLQNSFSYI 438 QL LLWK ++RR+ L +EL VP I+ I+ VR+ C + K M+S G +PF+ F C+F+ C N T +E H + E I +++ +L ++WI +NP +F L + I Sbjct: 7 QLNFLLWKCVLVRRRQKFWLAVELIVPCILFIIIALVRTKDFSEASPQCHYDSKGMLSAGVLPFIHSFFCSFSNRC------NAAPTTGDEKHFLFNDDGEHTRNESIIVDAIYYSSLQ----LRWIGNNPKKFEDLTKGAAEI 140
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Celegans
Match: abt-4 (ABC Transporter family [Source:UniProtKB/TrEMBL;Acc:Q9TXV8]) HSP 1 Score: 378.252 bits (970), Expect = 1.664e-106 Identity = 233/668 (34.88%), Postives = 372/668 (55.69%), Query Frame = 1 Query: 1234 PRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNES--IEVGSSMHI--MPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYY---SCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVA-KPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLY--------------PSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRM--DKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 P N Y GF+ +Q A+D A E++T ++ + S + P+P Y K ++ A +P +++ ++ SV +++++V EKE RLKEYM+VMGL+ F++WV+ FI L V+++++ + + S + ++F + Y + FM+S F + A A++ + + Y + F ++ + Y +C + +A + ++ + +E +G+++ LF P GH +I +I+D I +++TWY+EAV PG GV KPW F SYW N S+++ Q +H E EP +L I++ NL K Y S + ++NLNL Y Q T LGHNGAGK+TT S+LTG+ SPSSG+AY+ + DIRT + IR+++GLCPQYN LF +TV +H+ F+ LK D E +L R+ D K + ++ LSGG KRKLS+A+A IG S VV LDEPT+G+DP AR W LI+ RTI+LTTH M+EAD L DR+AI++ G+L+CCGS +FLK+++G+GY+L+++ + + + ++ ++ YI +A + + T +L + + F +LFK L+ H + I S+G+S T++EEVFLKV Sbjct: 256 PDDNDGGSPGYWQEGFMTVQRAVDVAITEIITGEDAQLTPLLDSYQVSRFPFPGYST-KIIEIGAFFMPVIVIFSFMTSVIYIVRAVVVEKEDRLKEYMRVMGLSQFINWVAHFIINYAKLTFAVIVLTILMHF--VALKSDMTLMFVFLMIYAFDVVYFAFMISSFMNSATSATLISVVFWMLLYFWYAFFSSIDQTNPYPLGYRLINC-INPDIALNYGLQLLAAYETQADGLKWGELFTPPSPDNNLTFGHALIALIVDGIIMIILTWYIEAVIPGGEGVPQKPW-FFVLPSYWFPN-SGSKTVDSSDQFQQIQYADHVKLEKEPTDLIPTINVVNLTKTYGTSFFKKLFDCKFGKSGEKRAVSNLNLKMYPGQCTVLLGHNGAGKSTTFSMLTGVASPSSGSAYVNDFDIRTSLPKIRREMGLCPQYNTLFGFMTVMEHLEFFAKLKERTWDPEEAREILARLRIDF----KADFMAGALSGGQKRKLSLAIALIGGSEVVMLDEPTSGMDPGARHETW-TLIQREKERRTILLTTHFMEEADLLGDRIAIMAHGQLECCGSPMFLKQQYGDGYHLTIVYDTTSTPDVSKTT----DIIREYIPEAHVFSYIGQEATYLL--SATHRPIFPKLFKELEDHQTQCGITSFGVSITTMEEVFLKVG 906 HSP 2 Score: 159.458 bits (402), Expect = 1.134e-38 Identity = 99/325 (30.46%), Postives = 166/325 (51.08%), Query Frame = 1 Query: 2197 NLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 N K + +NLVK Y + +N + LG NGAGKT+T +LTG S SSG AY+ ++ G CPQY+ + ++ E+ +Y + ++ + + +I + +I + + + SGG KR+LS+ +A +G V+ LDEPT+GVDP ARR IW++L + R ++LT+H MDE + L +AI+ GK +C GS +K ++G GY L + N + ++ +K + + EE LQ +P+ + ++ LF+ L+ ++ Y LS T+LE+VF++ + D Sbjct: 1445 NNKTALVSNNLVKWY--GNFNAVKGVNFHVNSKDCFGLLGVNGAGKTSTFQMLTGENSISSGDAYVNGWSVKNNWREAGANTGYCPQYDAIIKEMSGEETLYMFARIRGIPEKDIPKKVNAVIHAIGIGMYASRQIKTYSGGNKRRLSLGIAIVGLPDVLLLDEPTSGVDPKARRIIWNILNRLRDLGTALVLTSHSMDECEALCTELAIMVYGKFRCYGSCQHIKSRYGSGYTLLIRLKNRNDAEKTKST------IKQTFRGSVIKEEHVLQLNFDIPR---DGDSWSRLFEKLETVSTSLNWDDYSLSQTTLEQVFIEFSRD 1758 HSP 3 Score: 83.1889 bits (204), Expect = 1.622e-15 Identity = 98/370 (26.49%), Postives = 160/370 (43.24%), Query Frame = 1 Query: 4327 LAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILL-LIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFIL-DILEVNYEYLKEINDILKKVFL-IFPQFNLGRGIMDLFFNYFYNSNSIVKHEYNALQWDI------------AGEKLFSLFSLSIG------------------WWIVLIIIESGIVNR----IICGKLKN-----SYLKRIEIRNTEDFDVNLER---ERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 +A +I + A + FL+ ER SK Q +SGI P+++W++ F+WD ++I I+ IF F+ +Y + + L + YG +P Y F FF + F+++ Y++L G I +I+ I+ ++ YL I +F +FP +N+ + I + F N V+ L I A E+L+ L +G +WI + + E+ + I C K N + +++ R+ ED DV E+ +R++++ K+ L NL K Y G N AV + F V +CFGLLGVNGAGKT+TF Sbjct: 1159 IAYGLIVSFAVCVAGYSQFLITERKKKSKHMQLLSGIRPWMFWLTAFIWDAAWFVIRILCFDAIFYIFNITAYTHDFGVMLILTLSFLLYGWTALPFTYWFQFFFESAPKGFMMVTMYHILTGMIGSIAVPIISQTSSLDAGYLWSI------IFAWLFPTYNISQ-IATVTFQ-----NENVRIACKKLDCTIPMFKAVTACCGTASERLYVDNVLFVGNRKGILVYVIFLAVQGFIYWIWVFMRENDQFTKLFALIRCRKADNPIWDITDTDKVDERDVEDSDVIAEKSVVQRLANNNKT--ALVSNNLVKWY-------------GNFN---------AVKGVNFHVNSKDCFGLLGVNGAGKTSTF 1492
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Celegans
Match: ced-7 (ABC transporter ced-7 [Source:UniProtKB/Swiss-Prot;Acc:P34358]) HSP 1 Score: 219.935 bits (559), Expect = 3.177e-57 Identity = 175/627 (27.91%), Postives = 295/627 (47.05%), Query Frame = 1 Query: 1711 VSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGEL-SLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWY-VEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQ------------------------AFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLD--------------------QHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHLL---------KGFPLLQQQIIALHIKRYHYAKRDFKGFLAE 3426 V+ FF+ N S IL M+ + + KL EL ++ + GL AF+ AV+ + + + + +N+F + SL F +G +++MI+D I W + A+ + ++ R+ + + + QN IN Q + + + I + NLVK++ + ++ L+L Q + LGHNGAGK+TT S + GI P++G I D+ E R+ IG+CPQYN L+D LTV +H+ LK + + + + R++ DV L K N +++LSGGMKRKL + MA IG+S VV LDEPTAG+DP AR+ + L+ + ++ +RTI+LTTH+MDEA+ L D V I+S GKL G+ +LK+KFG GY L +++ + + + Y+ +A E Q I+LP+ ++F LF+ L+ +A + + S+GLS +LE+VF+ + D + +++ S S+ NA++ + Q +K D L+ G + Q I++ K++ Y++R++ + Sbjct: 354 VASFFNNTN--SAIKAILVAWGAMIGISY-KLRPELDQISSCFLYGLNINGAFALAVEAISDYMRRERELNLTNMFND--SSLHFSLGWALVMMIVD------ILWMSIGALVVDHIRTSADFSL---RTLFDFEAPEDDENQTDGVTAQNTRINEQMNPMASTSLNPPNADSDSLLEGSTEADGARDTARADIIVRNLVKIWSTTGERAVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRITICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLVEREKA-NRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYL--LTVVLDHNGDKRKMAVILTDVCTHYVKEAERGEMHGQQIEIILPE--ARKKEFVPLFQALEAIQDRNYRSNVFDNMPNTLKSQLATLEMRSFGLSLNTLEQVFITIGDKVDKAIASRQNSRISHNSR--------NASEPSLKPAGYDTQSSTKSADSYQKLMDSQARGPEKSGVAKMVAQFISIMRKKFLYSRRNWAQLFTQ 953 HSP 2 Score: 148.288 bits (373), Expect = 2.872e-35 Identity = 102/325 (31.38%), Postives = 170/325 (52.31%), Query Frame = 1 Query: 2209 GISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSH-DRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEES-----RLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 + I +L K + + +N L L + + LG NGAGKTTT +ILTG SSG A I D+ TE+ SI G CPQ++ L LT + + + + + ++ L I++ V + + L SGG KRK+S+ +A + ++++ LDEPTAG+DP ARR +W+LL+ R H + ++LT+H MDE + L R+A++++G L GS LK +G Y + +++ V+ + ++ + S L+W I + D S KF E+ + L + ++ + + L+ +SLEE FL++A Sbjct: 1363 ALVIKDLTKTF--GRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMIGGRDV-TELISI----GYCPQFDALMLDLTGRESLEILAQMHGFENYKAKAEL--ILECVGMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREHSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNY------TMTLSLYEPNQRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKF-EMVQALAK---DLGVKDFILAQSSLEETFLRLA 1668 HSP 3 Score: 112.849 bits (281), Expect = 1.595e-24 Identity = 90/352 (25.57%), Postives = 172/352 (48.86%), Query Frame = 1 Query: 4276 QSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIF-YGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFL-IFPQFNLGRGIMDLFFNYFYNSNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDF--------DVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 +ST +L+ ++++ LA +I + + ++FV+FL+EER QQF++GI+P ++ ++ ++D + Y + +I + +F+AF + + LA ++L F Y + +P +Y SF +PS A V+L + +++ ++ F++ ++ E+LK IL +F+ + P + G I+ + N+ ++ + WD G+ + + + + + + ++++ V R + + ++R N + V+ ERER+ + L + +LTK + R AVN LC V + ECFGLLGVNGAGKTTTF Sbjct: 1094 KSTSNSNLLPSQLIDVLLAPMLILIFAMVTSTFVMFLIEERTCQFAHQQFLTGISPITFYSASLIYDGILYSLICLIFLFMFLAFHWM-----YDHLAIVILFWFLYFFSSVPFIYAVSFLFQSPSKANVLLIIWQVVISGAALLAVFLIFMIFNIDEWLK---SILVNIFMFLLPSYAFGSAIITI------NTYGMILPSEELMNWDHCGKNAWLMGTFGVCSFALFVLLQFKFVRRFLS---QVWTVRRSSHNNVQPMMGDLPVCESVSEERERVHRVNSQNSALVIKDLTKTF----------------------GRFTAVNELCLAVDQKECFGLLGVNGAGKTTTF 1406
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Celegans
Match: ced-7 (ABC transporter ced-7 [Source:UniProtKB/Swiss-Prot;Acc:P34358]) HSP 1 Score: 219.935 bits (559), Expect = 3.377e-57 Identity = 175/627 (27.91%), Postives = 295/627 (47.05%), Query Frame = 1 Query: 1711 VSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGEL-SLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWY-VEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQ------------------------AFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLD--------------------QHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHLL---------KGFPLLQQQIIALHIKRYHYAKRDFKGFLAE 3426 V+ FF+ N S IL M+ + + KL EL ++ + GL AF+ AV+ + + + + +N+F + SL F +G +++MI+D I W + A+ + ++ R+ + + + QN IN Q + + + I + NLVK++ + ++ L+L Q + LGHNGAGK+TT S + GI P++G I D+ E R+ IG+CPQYN L+D LTV +H+ LK + + + + R++ DV L K N +++LSGGMKRKL + MA IG+S VV LDEPTAG+DP AR+ + L+ + ++ +RTI+LTTH+MDEA+ L D V I+S GKL G+ +LK+KFG GY L +++ + + + Y+ +A E Q I+LP+ ++F LF+ L+ +A + + S+GLS +LE+VF+ + D + +++ S S+ NA++ + Q +K D L+ G + Q I++ K++ Y++R++ + Sbjct: 354 VASFFNNTN--SAIKAILVAWGAMIGISY-KLRPELDQISSCFLYGLNINGAFALAVEAISDYMRRERELNLTNMFND--SSLHFSLGWALVMMIVD------ILWMSIGALVVDHIRTSADFSL---RTLFDFEAPEDDENQTDGVTAQNTRINEQMNPMASTSLNPPNADSDSLLEGSTEADGARDTARADIIVRNLVKIWSTTGERAVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRITICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLVEREKA-NRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYL--LTVVLDHNGDKRKMAVILTDVCTHYVKEAERGEMHGQQIEIILPE--ARKKEFVPLFQALEAIQDRNYRSNVFDNMPNTLKSQLATLEMRSFGLSLNTLEQVFITIGDKVDKAIASRQNSRISHNSR--------NASEPSLKPAGYDTQSSTKSADSYQKLMDSQARGPEKSGVAKMVAQFISIMRKKFLYSRRNWAQLFTQ 953 HSP 2 Score: 148.288 bits (373), Expect = 2.998e-35 Identity = 102/325 (31.38%), Postives = 170/325 (52.31%), Query Frame = 1 Query: 2209 GISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSH-DRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEES-----RLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 + I +L K + + +N L L + + LG NGAGKTTT +ILTG SSG A I D+ TE+ SI G CPQ++ L LT + + + + + ++ L I++ V + + L SGG KRK+S+ +A + ++++ LDEPTAG+DP ARR +W+LL+ R H + ++LT+H MDE + L R+A++++G L GS LK +G Y + +++ V+ + ++ + S L+W I + D S KF E+ + L + ++ + + L+ +SLEE FL++A Sbjct: 1365 ALVIKDLTKTF--GRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMIGGRDV-TELISI----GYCPQFDALMLDLTGRESLEILAQMHGFENYKAKAEL--ILECVGMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREHSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNY------TMTLSLYEPNQRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKF-EMVQALAK---DLGVKDFILAQSSLEETFLRLA 1670 HSP 3 Score: 112.849 bits (281), Expect = 1.556e-24 Identity = 90/352 (25.57%), Postives = 172/352 (48.86%), Query Frame = 1 Query: 4276 QSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIF-YGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFL-IFPQFNLGRGIMDLFFNYFYNSNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDF--------DVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 +ST +L+ ++++ LA +I + + ++FV+FL+EER QQF++GI+P ++ ++ ++D + Y + +I + +F+AF + + LA ++L F Y + +P +Y SF +PS A V+L + +++ ++ F++ ++ E+LK IL +F+ + P + G I+ + N+ ++ + WD G+ + + + + + + ++++ V R + + ++R N + V+ ERER+ + L + +LTK + R AVN LC V + ECFGLLGVNGAGKTTTF Sbjct: 1096 KSTSNSNLLPSQLIDVLLAPMLILIFAMVTSTFVMFLIEERTCQFAHQQFLTGISPITFYSASLIYDGILYSLICLIFLFMFLAFHWM-----YDHLAIVILFWFLYFFSSVPFIYAVSFLFQSPSKANVLLIIWQVVISGAALLAVFLIFMIFNIDEWLK---SILVNIFMFLLPSYAFGSAIITI------NTYGMILPSEELMNWDHCGKNAWLMGTFGVCSFALFVLLQFKFVRRFLS---QVWTVRRSSHNNVQPMMGDLPVCESVSEERERVHRVNSQNSALVIKDLTKTF----------------------GRFTAVNELCLAVDQKECFGLLGVNGAGKTTTF 1408
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Fly
Match: ABCA (gene:FBgn0031170 transcript:FBtr0332489) HSP 1 Score: 421.009 bits (1081), Expect = 7.567e-121 Identity = 227/646 (35.14%), Postives = 380/646 (58.82%), Query Frame = 1 Query: 1264 YVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLS-----KITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSS--ESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMN 3180 Y+ GF+ LQ ++ A++ + + + M P+P Y+ D L+ +++++ ++++++ T + K I EKE +LKE MK+MGL+N++HW +WF+ + ++L I +++++ ++++ + ++ + + Y++S IC FM++ FFS+A+ A+ G+++F Y+ + I +LSL+ L+S A +K ++ +E EG+Q+SN F +G +I+M++ IY++I YVE V PG +GV +PWNF R +W + + E IP N + + +AFE+EPE +G+ + +L K + NK+ V+ L++N +E +IT LGHNGAGKTTTIS+LTG+F P+SGTA I DIRT ++ R +G+CPQ+NVLFD ++V +HI F+ +K + +E + + +K ++L +K N S LSGGMKRKLS+ A G+++VV DEP++G+DP ARR +WDLL + + RT++LTTH MDEAD L DR+AI+ G+L+C G+ FLK+++G GY + + + YI + + + + LP D S KF E+F L++ E+ + YG+ TS+EEVF+KV + N Sbjct: 198 YLREGFLPLQHSLSMAYLRQKSGEQDLP-NVVMKRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWTAWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSRASTAAAVTGLIWFIAYIPYSFTINSYDDLSLSSKLGWSLISNTAMGFGIKLILGFEGTGEGLQWSNFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTREFWCGEREYTGVEDIP----NGHVEQRDPKAFETEPEGKHIGLQMRHLKKRF-GNKM-VVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAIINGSDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKV-GRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGY------RLICVKRDDCETNEVTALLNKYIPGLKPECDIGAELSYQLP--DSASAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAEKDN 827 HSP 2 Score: 176.407 bits (446), Expect = 8.360e-44 Identity = 101/324 (31.17%), Postives = 175/324 (54.01%), Query Frame = 1 Query: 2260 VINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGE----------------------GYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 +N ++L E + LG NGAGKTTT ++TG SSG AY+ + + M+SI + IG CPQ++ L D LT + + + +L+ + ++ I + + K + I+ + SGG KRKLS A+A IG+ V++LDEPT G+DP ARR +W+++ + R ++I+LT+H M+E + L R+AI+ G+ +C GS LK KF + GY + + S R+ + + +FV+ ++ + EE + T +P + K++ +F ++ + ++++ Y +S T+LEE+FL+ A Sbjct: 1361 AVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQGLSLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAKSFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDSGKSIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLTGV---KWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFA 1681 HSP 3 Score: 106.686 bits (265), Expect = 1.759e-22 Identity = 125/471 (26.54%), Postives = 213/471 (45.22%), Query Frame = 1 Query: 4009 RDFVNASQANHNQSNLNSLKFIDY---LQKTFKI-----YGIKTSFTR----IWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEY-LKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYNAL-------------------QWDIAGEKLFSLFSLSIG--WWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTE---DFDVNLERER---MSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 D + +N+ + F DY L KT ++ Y + + T W N++ + P N+ N + S+VK I V+N P+ ST L L LA + F + F+ + +++FL++ER S +K QFV G+ + +W+S F+ D YI+ +I++I + F + LLL+ +G A++P +Y S F P+T F ++ N+ G ++ FI+ ++ + + K+ DIL +F IFP F+L + ++ N N+ K AL W+ G +++ G +++++I++E ++N ++ K++ + + TE D DV ERER MSS++ + L + +TK Y ++ AVN + V+E ECFGLLGVNGAGKTTTF Sbjct: 956 EDLARSYGSNYGLELTGTQGFEDYILDLGKTIQVRINSRYLVAATITESKITAWLNNQALHTAPLTVNMVHNAIADKLF-GSSVK-----IQVTNAPLPYTTSTLLSQLSTGNNLGTQLASNLCFCMCFVSSIYILFLIKERESRAKLLQFVGGVKVWTFWLSQFICDFASYIVTALIVVITIVCFQETGLSTFGELGRYYLLLLLFGFAVLPFIYIMSLFFREPATGFARVSIVNIFCG----MALFIVVVVMSSELFDTKDTADILGWIFRIFPHFSLAMSLNKVYTNT-ATRNACAKA--GALPPILLCELVPQCCNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFRLINELMF-KIRQ-LISKPPPPPTEGQLDDDVANERERILQMSSNELATKNLVLDRVTKYYGQFM----------------------AVNQVSLCVQEVECFGLLGVNGAGKTTTF 1389
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Fly
Match: ABCA (gene:FBgn0031170 transcript:FBtr0332488) HSP 1 Score: 421.394 bits (1082), Expect = 8.258e-121 Identity = 227/646 (35.14%), Postives = 380/646 (58.82%), Query Frame = 1 Query: 1264 YVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLS-----KITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSS--ESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMN 3180 Y+ GF+ LQ ++ A++ + + + M P+P Y+ D L+ +++++ ++++++ T + K I EKE +LKE MK+MGL+N++HW +WF+ + ++L I +++++ ++++ + ++ + + Y++S IC FM++ FFS+A+ A+ G+++F Y+ + I +LSL+ L+S A +K ++ +E EG+Q+SN F +G +I+M++ IY++I YVE V PG +GV +PWNF R +W + + E IP N + + +AFE+EPE +G+ + +L K + NK+ V+ L++N +E +IT LGHNGAGKTTTIS+LTG+F P+SGTA I DIRT ++ R +G+CPQ+NVLFD ++V +HI F+ +K + +E + + +K ++L +K N S LSGGMKRKLS+ A G+++VV DEP++G+DP ARR +WDLL + + RT++LTTH MDEAD L DR+AI+ G+L+C G+ FLK+++G GY + + + YI + + + + LP D S KF E+F L++ E+ + YG+ TS+EEVF+KV + N Sbjct: 198 YLREGFLPLQHSLSMAYLRQKSGEQDLP-NVVMKRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWTAWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSRASTAAAVTGLIWFIAYIPYSFTINSYDDLSLSSKLGWSLISNTAMGFGIKLILGFEGTGEGLQWSNFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTREFWCGEREYTGVEDIP----NGHVEQRDPKAFETEPEGKHIGLQMRHLKKRF-GNKM-VVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAIINGSDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKV-GRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGY------RLICVKRDDCETNEVTALLNKYIPGLKPECDIGAELSYQLP--DSASAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAEKDN 827 HSP 2 Score: 176.792 bits (447), Expect = 7.750e-44 Identity = 101/324 (31.17%), Postives = 175/324 (54.01%), Query Frame = 1 Query: 2260 VINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGE----------------------GYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 +N ++L E + LG NGAGKTTT ++TG SSG AY+ + + M+SI + IG CPQ++ L D LT + + + +L+ + ++ I + + K + I+ + SGG KRKLS A+A IG+ V++LDEPT G+DP ARR +W+++ + R ++I+LT+H M+E + L R+AI+ G+ +C GS LK KF + GY + + S R+ + + +FV+ ++ + EE + T +P + K++ +F ++ + ++++ Y +S T+LEE+FL+ A Sbjct: 1361 AVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQGLSLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAKSFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDSGKSIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLTGV---KWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFA 1681 HSP 3 Score: 106.686 bits (265), Expect = 1.650e-22 Identity = 125/471 (26.54%), Postives = 213/471 (45.22%), Query Frame = 1 Query: 4009 RDFVNASQANHNQSNLNSLKFIDY---LQKTFKI-----YGIKTSFTR----IWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEY-LKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYNAL-------------------QWDIAGEKLFSLFSLSIG--WWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTE---DFDVNLERER---MSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 D + +N+ + F DY L KT ++ Y + + T W N++ + P N+ N + S+VK I V+N P+ ST L L LA + F + F+ + +++FL++ER S +K QFV G+ + +W+S F+ D YI+ +I++I + F + LLL+ +G A++P +Y S F P+T F ++ N+ G ++ FI+ ++ + + K+ DIL +F IFP F+L + ++ N N+ K AL W+ G +++ G +++++I++E ++N ++ K++ + + TE D DV ERER MSS++ + L + +TK Y ++ AVN + V+E ECFGLLGVNGAGKTTTF Sbjct: 956 EDLARSYGSNYGLELTGTQGFEDYILDLGKTIQVRINSRYLVAATITESKITAWLNNQALHTAPLTVNMVHNAIADKLF-GSSVK-----IQVTNAPLPYTTSTLLSQLSTGNNLGTQLASNLCFCMCFVSSIYILFLIKERESRAKLLQFVGGVKVWTFWLSQFICDFASYIVTALIVVITIVCFQETGLSTFGELGRYYLLLLLFGFAVLPFIYIMSLFFREPATGFARVSIVNIFCG----MALFIVVVVMSSELFDTKDTADILGWIFRIFPHFSLAMSLNKVYTNT-ATRNACAKA--GALPPILLCELVPQCCNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFRLINELMF-KIRQ-LISKPPPPPTEGQLDDDVANERERILQMSSNELATKNLVLDRVTKYYGQFM----------------------AVNQVSLCVQEVECFGLLGVNGAGKTTTF 1389
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Fly
Match: ABCA (gene:FBgn0031170 transcript:FBtr0306679) HSP 1 Score: 421.394 bits (1082), Expect = 8.628e-121 Identity = 227/646 (35.14%), Postives = 380/646 (58.82%), Query Frame = 1 Query: 1264 YVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLS-----KITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSS--ESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMN 3180 Y+ GF+ LQ ++ A++ + + + M P+P Y+ D L+ +++++ ++++++ T + K I EKE +LKE MK+MGL+N++HW +WF+ + ++L I +++++ ++++ + ++ + + Y++S IC FM++ FFS+A+ A+ G+++F Y+ + I +LSL+ L+S A +K ++ +E EG+Q+SN F +G +I+M++ IY++I YVE V PG +GV +PWNF R +W + + E IP N + + +AFE+EPE +G+ + +L K + NK+ V+ L++N +E +IT LGHNGAGKTTTIS+LTG+F P+SGTA I DIRT ++ R +G+CPQ+NVLFD ++V +HI F+ +K + +E + + +K ++L +K N S LSGGMKRKLS+ A G+++VV DEP++G+DP ARR +WDLL + + RT++LTTH MDEAD L DR+AI+ G+L+C G+ FLK+++G GY + + + YI + + + + LP D S KF E+F L++ E+ + YG+ TS+EEVF+KV + N Sbjct: 220 YLREGFLPLQHSLSMAYLRQKSGEQDLP-NVVMKRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWTAWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSRASTAAAVTGLIWFIAYIPYSFTINSYDDLSLSSKLGWSLISNTAMGFGIKLILGFEGTGEGLQWSNFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTREFWCGEREYTGVEDIP----NGHVEQRDPKAFETEPEGKHIGLQMRHLKKRF-GNKM-VVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAIINGSDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKV-GRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGY------RLICVKRDDCETNEVTALLNKYIPGLKPECDIGAELSYQLP--DSASAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAEKDN 849 HSP 2 Score: 176.407 bits (446), Expect = 8.315e-44 Identity = 101/324 (31.17%), Postives = 175/324 (54.01%), Query Frame = 1 Query: 2260 VINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGE----------------------GYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 +N ++L E + LG NGAGKTTT ++TG SSG AY+ + + M+SI + IG CPQ++ L D LT + + + +L+ + ++ I + + K + I+ + SGG KRKLS A+A IG+ V++LDEPT G+DP ARR +W+++ + R ++I+LT+H M+E + L R+AI+ G+ +C GS LK KF + GY + + S R+ + + +FV+ ++ + EE + T +P + K++ +F ++ + ++++ Y +S T+LEE+FL+ A Sbjct: 1383 AVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQGLSLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAKSFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDSGKSIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLTGV---KWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFA 1703 HSP 3 Score: 106.686 bits (265), Expect = 1.813e-22 Identity = 125/471 (26.54%), Postives = 213/471 (45.22%), Query Frame = 1 Query: 4009 RDFVNASQANHNQSNLNSLKFIDY---LQKTFKI-----YGIKTSFTR----IWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEY-LKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYNAL-------------------QWDIAGEKLFSLFSLSIG--WWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTE---DFDVNLERER---MSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 D + +N+ + F DY L KT ++ Y + + T W N++ + P N+ N + S+VK I V+N P+ ST L L LA + F + F+ + +++FL++ER S +K QFV G+ + +W+S F+ D YI+ +I++I + F + LLL+ +G A++P +Y S F P+T F ++ N+ G ++ FI+ ++ + + K+ DIL +F IFP F+L + ++ N N+ K AL W+ G +++ G +++++I++E ++N ++ K++ + + TE D DV ERER MSS++ + L + +TK Y ++ AVN + V+E ECFGLLGVNGAGKTTTF Sbjct: 978 EDLARSYGSNYGLELTGTQGFEDYILDLGKTIQVRINSRYLVAATITESKITAWLNNQALHTAPLTVNMVHNAIADKLF-GSSVK-----IQVTNAPLPYTTSTLLSQLSTGNNLGTQLASNLCFCMCFVSSIYILFLIKERESRAKLLQFVGGVKVWTFWLSQFICDFASYIVTALIVVITIVCFQETGLSTFGELGRYYLLLLLFGFAVLPFIYIMSLFFREPATGFARVSIVNIFCG----MALFIVVVVMSSELFDTKDTADILGWIFRIFPHFSLAMSLNKVYTNT-ATRNACAKA--GALPPILLCELVPQCCNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFRLINELMF-KIRQ-LISKPPPPPTEGQLDDDVANERERILQMSSNELATKNLVLDRVTKYYGQFM----------------------AVNQVSLCVQEVECFGLLGVNGAGKTTTF 1411
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Fly
Match: CG6052 (gene:FBgn0036747 transcript:FBtr0075195) HSP 1 Score: 382.874 bits (982), Expect = 4.144e-108 Identity = 224/648 (34.57%), Postives = 369/648 (56.94%), Query Frame = 1 Query: 1264 YVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIM--PYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITA------MSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLL-SQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEP--ENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNE-IESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 Y+ GF+ +Q A+ +++ L + + ++H+ PY Y D+ L L LLPF++++++ + + K + EKE +LKE MK++G++N++HWV+WF+ + ++L++ VV + ++L + K A SS V + YV++ +C FM++V FSKA+ AS I +F Y+ + LSL L+ S A + ++ WE EG+ + N+F + + I+ M S +++ I YVE VFPG+YGV + WNF+C ++YW + S +P + I H + +++ ++GI + NL K Y K+ + ++L + ++IT LGHNGAGKTTTI+++TGI P+SGTA + DIRT + R+ +G+CPQ N+LF ++V DHI F+ LK + + +E+ + + + + L +K + +LSGGMKRKLS+ A GN++VV DEP++G+D RR +WDLL + RTI+LTTH+MDEAD L DR+AI+S+GKLQC G+ +LK++FG GY S + + + ++ Y+ + + T LP S+KF EL ++LD+ A++ ++ YGLS +LE+VF+ V D Sbjct: 196 YIREGFLPIQHALTMSWLALASGVTDTGI-PAIHLQRFPYRAYTYDQLLSGLRQLLPFVILLSFIYPASTVTKYVTSEKELQLKEIMKLIGVHNWLHWVAWFVKSYIMLML-VVFLIMSLIMVKFYASVAVLTFSSWVPVLLFLHTYVVTSVCLCFMLAVLFSKASTASAVAAIFWFLTYIPYSFGYYYYERLSLMSKLLISLIFSNSALGFGIHVIVMWEGTGEGITWRNMFHPVSTDDSLTLFYIIMTMSFGSIMFISICLYVEQVFPGEYGVPRRWNFMCHKNYWRQYVPSLNIVPSFQT------ILHGSAKAKSCRRAREVGIQLFNLQKNY--GKLKAVKGISLKMHRNEITVLLGHNGAGKTTTINMITGIVKPTSGTAIVNGYDIRTHLAKARESLGICPQNNILFKEMSVRDHIIFFSKLKGIRGTKAVENEVGKYMTMLKLQDKSYVAAKNLSGGMKRKLSLCCALCGNAKVVLCDEPSSGIDAAGRRSLWDLL-QSEKDGRTILLTTHYMDEADVLGDRIAILSEGKLQCQGTSFYLKKRFGTGY------LLVCIMQSGCDVGAVTQLIRKYVPPIKPERVLGTELTYRLPTE--YSKKFAELLQDLDEKCAQLQLVGYGLSGATLEDVFMAVNTD 824 HSP 2 Score: 157.147 bits (396), Expect = 7.253e-38 Identity = 100/335 (29.85%), Postives = 170/335 (50.75%), Query Frame = 1 Query: 2260 VINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXX------------------------------XXXXXXXXXXXXXXILK---FVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 + ++ + ++ LG NGAGKT+T +L G +SG AYI +I T + +KIG CPQ++ LF+ LT + + Y LL+ + + + + + + ++ + H SGG +RKLS A++ +GN V++LDEPT+G+DP ARR +W ++ R+ ++I+LT+H MDE + L R+AI+ G+ +C GS+ LK +F +G L + Q + + ILK F+ I DA + EE T +P +S+ +++F+ L+ + +++I Y + T LEE+FL A Sbjct: 1350 AVKAISFHVPHAECFGLLGINGAGKTSTFKMLAGDEKITSGEAYIDGTNISTH--KVYRKIGYCPQFDALFEDLTGRETLNIYCLLRGVQRRHVTPICWGLAISFGFAKHMDKQTKHYSGGNRRKLSTAISVLGNPSVLYLDEPTSGMDPAARRQLWQIIGLIRTAGKSIVLTSHSMDECEALCSRLAIMVDGEFKCLGSVQSLKNQFSKGLILKVKVKHKKKTFQRVVEDSSSSNDKKSISETDLKFLQMASVMESSQADRILKVNRFISKEIPDAELKEEYNGLITYYIP----HSKTLSKIFQLLETNSHKLNIEDYLIMQTRLEEIFLDFA 1678 HSP 3 Score: 100.138 bits (248), Expect = 1.502e-20 Identity = 103/414 (24.88%), Postives = 182/414 (43.96%), Query Frame = 1 Query: 4129 IWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFI--DYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYE--YLKEINDILKKVFLIFPQFNLGRGIMDLFFNY-FYNSNSI--VKHEYNALQ---------------WDIAGEKLFSLFSLSIGWWI-VLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 +W N+K + P N+ N L A+K + D V+N P+ T+ L L +L ++I + + FI A + I ++ ER + +K QF+SG++ YW S+ +WD + +++ + I+ AF YI + + +L+ +G I Y S S +T F ++ N L+GT L + +N+E LK++ + L F + P ++L + Y SI ++ L+ W G + + + +G + +LI++ V +I KL N + KR + ++E + + ++Q+ V +IN + L +K + K ++AV + F V ECFGLLG+NGAGKT+TF Sbjct: 994 VWLNNKPLHTAPLTLNLLHNAL--------AIKLLGQDASTYVTNEPLPYSDDTRTLRLNKGQVLGAEISINLSLTMCFITAFYAIPIIRERETRAKLLQFLSGVDVCAYWTSHIVWDYLVFVLSALSSILTIAAFKEIGYITPLDLSRYFYMLLIFGFPGIMLSYAASGCFSDAATGFTRISIINTLMGT-----GLFLMFMTLNFEAFQLKDVAEKLAWYFRLSPHYSLASSTHSIHIGYNIRRGCSIGGIRKLPKQLRCRNVPICCDIPGYYGWRKPGVLVEITYMIMLGSTLFLLIVMHDAKVCNLIAEKLGNCFSKRKRVEG----GTSIENDSVVAEQRV--VREMINSGRKDVPLLVYKIS----------KRYRSKLAVKAISFHVPHAECFGLLGINGAGKTSTF 1378
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Fly
Match: CG42816 (gene:FBgn0261998 transcript:FBtr0307890) HSP 1 Score: 276.944 bits (707), Expect = 6.581e-75 Identity = 196/593 (33.05%), Postives = 316/593 (53.29%), Query Frame = 1 Query: 1468 LIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRL----SKITAM--SSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKL---EGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQN--PGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESI-PLMRNNNQNCEINHQAFESEPENLKL----------GISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMN 3180 L KSIV EKE +LK + +MG+ + + WV+W+I T ++ +I I+++ +L S+I+ M + ++ V+ IC +F++S S S+ + Y+ F++ EG L++ + QV V + WE EG+Q+ NLF+ PG +L VG+ +++MI+ SF+ LL+ Y+E + PG YGV +PW+F C R S+ES+ P R N+ I A + E +L+L G+ I L K + K+ V+ N++ + +E QIT +GHNGAGKTT IS+L G SP+SGTA I DIR E ++ IGLCPQ NVLF L+ HI + L+ + E++S + +K ++L EK + +LSGG +R+LS+A + G +V+ DEP+ G+DP ARR +W L+++ + TI+LTTH +D+ + L DRV IIS G+L+C GSL FLK++ + + E + + ++ + LP + S+ F+ LF++L+ M + + + LS SLEE+F+ + +N Sbjct: 82 LTKSIVEEKELQLKVTLNLMGVGSCLQWVAWYIQTFIIFLIGSSIITLFWKLVLPNSEISFMPFTHWSMALFVLLVLSHCTICFSFLMSSLISTTYRISLVTFLALIATYLPFLILHSKGCSEG-LNVFLSLFLLSGLQVL----VVGICMWEDYGEGLQWGNLFETSWPGGTL--SVGYILLVMILASFLSLLLCLYLEKIRPGPYGVPQPWHFPCTRCC------STESLLPYSRLFNRIFGIYSAAPDEERPDLQLIEPDPVDKIAGVQIRGLSKTF--GKMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTALINGFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLKKLNLQEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILEAK-EGCTILLTTHQLDDGEVLGDRVVIISDGQLRCIGSLPFLKKQV------DASCLITCEARKRCDLEKLTSLISRHVGTIQPFSIKGRDVCYKLPLS--KSKYFSSLFRDLESQMNILGVRGFSLSSVSLEEIFMSFGAEDLN 650 HSP 2 Score: 126.331 bits (316), Expect = 1.376e-28 Identity = 84/326 (25.77%), Postives = 158/326 (48.47%), Query Frame = 1 Query: 2218 IHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINK 3195 ++ + K Y +++ V NN++ S LG NGAGKTTT ++ G S G YI +R + + +++G CPQ + F+ LT + + L+ ++ ++ + ++ + SGG KRK++ A+A NS ++ LDEP+AGVDP +RR +W ++ + + ++LT+H+MDE + L + I+ G + GS+ +K K +G L N I + + +A + E+ + + S ++E+F+ ++ + + + Y LS SLE+ F ++A++ K N+ Sbjct: 1138 VNGVSKKYGCDQLAV-NNISFALKPSHCVGLLGPNGAGKTTTFKMIVGEHSIDKGNIYISGYSMRMKRNKAMKELGYCPQSDSFFEFLTGRQLLKVFLLIWGFPSKDLNKRCEKLADQFGFRKHLDKKITYYSGGTKRKINAAVACGANS-LICLDEPSAGVDPASRRHVWTIINEVAQQGKAVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHVKNKIAKG-MTLKLVVNVQPDNMVAMLTKIEDDIYMTYPNAELKEKYEFSGRLTFQISKDTS--WSEIFEYVEGNRSSWHLEDYSLSQPSLEDAFEEIAEERRKKKSNQ 1458
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Zebrafish
Match: abca1b (ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]) HSP 1 Score: 882.478 bits (2279), Expect = 0.000e+0 Identity = 596/1752 (34.02%), Postives = 950/1752 (54.22%), Query Frame = 1 Query: 481 MSENETTIES-GYNELGEIICGSPE--------------NDFKLFMRNFIKNQRRKRSLLT------CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSK-------LFSW-------------IERGLNCTELDRFIPLDSLKDIDKLTNQSF-----RNFLAVIIFNETFQYLTPKNTTFL----SYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXX--------------------------------------XXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD-------------PMNKLINKEKSYYSYYCNILKMKLRINATKTEIF----LNQNPDQKQSKFLDQSD----HLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWS----PASILDIPMV--------SPECDCSKTGNQI----CNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRK-----------LYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIY--GIKT-SFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYN----ALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIV--NRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 ++EN T S Y + I+CG PE ++F+ N + + + C + ++ + I + ++ L PL+ GK+ Y P+ ++II + N TF+ L LR W + + +++ N+ ++ ++ +AN T +++ +V S++ S+ F+W I R + C LD+ P+ + +KL N+S R F A I+F + P N++ L +Y+IR+ + ++ T K K D +W P PR + F D +Y+ GF +LQ+ ++ + I VT ++ + G + MPYPCY+ D FL+ ++ +P + +AW SV ++IK +VYEKE+RLKE M++MGL+N + W SWFIS+++ L+I ++ + L++ + S VVF + + + I Q F++S F++AN+A+ GGI+YFT Y+ +V+ + + + LLS VAF ++ +E+ G+Q++NLF +P E + + C+ILM D+F+Y ++TWY+E VFPGQYG+ +PW F +SYW ++ + + +N E EP +LKLG+ I NLVK+Y K ++ L L F+E QIT+FLGHNGAGKTTT+SILTG+F P+SGTAYI+ +DIR+E+ SIRQ +G+CPQ+NVLF LTVE+HI+FY LK + + E+++ + +I+ D L K + + LSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP+ARRGIWDLL+KYR+ RTI+L+THHMDEAD L DR+AIIS GKL C GS +FLK + G GYYL+ ++ + + + I + + ++ ARM+E+ + T VLP + F ELF +LD +A++ I SYG+SDT+LEE+FLKVA+D P+ + + ++ + + + LK T+ + F +P+ K++ +L SD + +KG+ L +QQ +AL KR YA+R KGF A+++LP + + ++F I K + ++PW+ E F+ ++ +KL D G G RCM + + C +E WS P SI++I SP C+CS G + C G PP +I + ++ L NLTG NISDYL+K + ++ K YGGF ST +++ P EE+ D ++ + Q +S D K+ + G+ T + +IW N+KG+ S+ A+ N+ +N +LR+ L ++GI+ N P+ + + + +++ ++I VIF +SF+PASFV+FL++ERV+ +K QF+SG+ PY+YW++NFLWD+ Y++P ++I+IF+ F ++Y+ + N LLL+ YG +I P MYP SF PSTA+VVL + N+L+G +ISTF++++ N+E + INDILK V LIFP F LGRG++D+ N ++++ + N L+WD+ G+ LF++ + ++I+ ++I+ + +C KL ED DV ER+R+ S D+L + LTK+Y + ++ AV+ LC G+ GECFGLLGVNGAGKT+TF Sbjct: 292 LTENATGSPSLMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNFQALFGNHNDSDDQPVPVYDNTTTPYCNSMMRNMEASPISRM-IWRALKPLLMGKILYTPHSPATQKIIHEVNKTFQELGILRDLGGMWE-EARPKVWNFMENSNEMDLMRTLLLNNLTANFFSAQLAGTQWSVEDVISFLSKHSEDTRPQGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVSTE---EKLVNESMSLLDNRKFWAGIVFLDI-----PSNSSELPPNVNYKIRMDIDNVERTNKIK--DGYWDPGPRADPFEDLRYIWGGFSYLQDVVEHSIIRAVTGSKE-KTGVYIQQMPYPCYVDDIFLRIMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAGLLVLLLKMGNLLPYSDPGVVFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFAAKVIASLLSPVAFGFGCEYFALFEEQGVGIQWNNLFSSPVEEDDYNLTTCLILMYFDAFLYGVMTWYIETVFPGQYGIPRPWYFPFTKSYWFGENSTNNTAIHGKKSNAGA----VCIEEEPTHLKLGVYIENLVKVYRHGKKLAVDGLTLGFHEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIMGKDIRSELSSIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEEVKAEMEQILSDTGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKYRA-GRTILLSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKNTEPSLSSCRNSSSTVSFVKKDDNASESSSDAGLGSDQESEAATAIVDVTIISRLILKHVPAARMVEDQGHEITYVLPYESAKNGAFVELFHDLDDRLADLGISSYGVSDTTLEEIFLKVAEDSGVDTEMLSDGTLPVRR--QRRHAFGADHQSCLK-----PLTEDDSFDCNESEGDPESKETDYLSGSDGKGSYQVKGWSLKRQQFVALLWKRLLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLALNPWMY------EEQFMFFSEDAPYDVSTHKLLRALFDDPG-FGTRCMKGE--SIPDAPCTMGDEE--WSTPEVPESIIEILTTRNWTMNDPSPACECSCNGKKKMLPECPAGAGGLPPPQIKI-SETETLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARST-----QVL---PPAEEIDDAISRVREIF-QLGKDSGSAADRFLKSLSAFINGLDTKNNVKIWFNNKGWHSIGAFLNVMNNGILRANLPPGKDPS-EFGITAYNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPYLYWLANFLWDMCNYVVPATLVILIFVCFQQKAYVSATNLPVLALLLLLYGWSITPLMYPASFLFKIPSTAYVVLTSVNILIGINGSISTFVMELFG-NHE-IGGINDILKNVLLIFPHFCLGRGLIDMVKNQAM-ADALERFGENRFRSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFFFEPKSLCPKLSPI--------GEEDEDVARERQRIMSGAGQGDILELRQLTKVY--------------------KRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTF 1965 HSP 2 Score: 187.193 bits (474), Expect = 7.413e-47 Identity = 101/318 (31.76%), Postives = 176/318 (55.35%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 + + L K+Y + P ++ L + + LG NGAGKT+T +LTG + G A+I + I E+D + Q +G CPQ++ + D LT +H+ FY +L+ + +NE+ +V I+ + L + ++ + SGG RKLS A++ IG VVFLDEPT G+DP ARR +W+ + R+++LT+H M+E + L R+AI+ G+ +C GS+ LK +FG+GY + + + + ++KF++ + + + E+ R LP + + +F L ++ + I Y +S T+L++VF+ A Sbjct: 1921 LELRQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTKGEAFIAGKSILREIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPENEVCAVAEWGIRKLGLVKYVDKNAGSYSGGNMRKLSTAISLIGAPPVVFLDEPTTGMDPKARRALWNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGY-----TIILRVAGPDPDLQPVMKFIESELPGSTLKEKHRNMLQYQLPSSLTS---LAHIFSILAKNKEFLRIEDYSVSQTTLDQVFVNFA 2230 HSP 3 Score: 67.781 bits (164), Expect = 1.345e-10 Identity = 34/80 (42.50%), Postives = 44/80 (55.00%), Query Frame = 1 Query: 19 ISNQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY 258 IS QL LLWKNF +RR+ LL E+ PL + FIL AVR Y+ C F K M S G +P++ +C N C+ Sbjct: 3 ISTQLGLLLWKNFTYRRRQTLQLLTEIVWPLFIFFILIAVRLYYPPYEQHECHFPNKAMPSAGTLPWIQGIVCNANNPCF 82
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Zebrafish
Match: abca4a (ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]) HSP 1 Score: 790.801 bits (2041), Expect = 0.000e+0 Identity = 553/1714 (32.26%), Postives = 864/1714 (50.41%), Query Frame = 1 Query: 619 CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWR---LHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTL-----------------------------FNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSFR-----NFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFP--GQYGVAKPW--NFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQA---------------------------FESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKL----------QCCGSLVFLK------------RKFGEG----------------YYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGES-------GIRCMNPSIYRLDNYQCFYRNENNMWSPASILDIPMV------------------SPECDCSKTGNQ-----ICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSR-----------KLYGGFQF--VLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLK-FIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNY-FYNSNSIVKHEY--NALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 C + + N + + ++ + P + GK+ Y P+ RQII+ AN TF+ L+ LR W +F D + N+ + ++ NP + D +N F+ N+ + D V +L I R C LD+F S+ D D+LT+++ F A ++F + + + T K + +IR+ + ++ T K K DR+W P PR + D +Y+ GF +LQ+ I+ I+ T E +G + MPYPCY+ D F+ L P +V+AW SV++ +KSIV EKE RLKE +K MG+ N V W +WFI T ++ ++++ + K+ S+ ++F + + + I Q F++SVFF+KAN+A+ GI+YFT Y+ VV + ++ M L+SQVAF +++ +E+ G+Q+ N+ + E F + II+M +D+ +Y ++ WY+++VFP G+ V KP N + N + E P + ++ +I + FE EP L G+ + NL K++ + P ++ L+L FYE QITAFLGHNGAGKTTT+S+LTG+F P+SGTAYI +DIRT+MD+IR+ +G+CPQ+N++F +TV +HI FY LLK E + + +++D+ L K N + +LSGGM+RKLS+AMAF+G ++VVFLDEPT+GVDP++RR IWDLL+KYR RT+IL+THHMDEAD LSDRVAIISQG+L C G+ +L RK G+ K + + N E+I V ++ +AR++E + T +LP R + LF+ L++ +A+M + S+G+SDTSLEEVFLKV D IN + N + + + +Q +KGF L+ +Q AL IKR+H+ R K FLA+++LP + ++F I + + +SPW+ + TF+ E +++S GE G RCM L+ Y C N W ++P+V SP C CS T N+ +C + +GG P RI ++ D L +LTG NISDYL+K +P L R + YGG LP K I ++ ++ +N + +++ L+ F+ Y++ + ++W N+KG+ +M A+ N+ +N + V +YGI+ N P+ + + V ++ +AI VIF +SF+PA FV++L++ERV+ +K QFVSG++P VYW +NF WD++ Y + +++ IFIAFD + Y N A I LL+ YG ++ P MYP S+ + PSTA+V L+ NL +G ++ TFILD+ + + E L + N +LKK L+FP F LGRG++D+ N + + ++ + WD GE L + ++I+ I+I+ R + + K+ I + ED DV ERER+ S+D+L++ +L+K Y + AV+ +C GV GECFGLLGVNGAGKTTTF Sbjct: 370 CNDLMKDLESNPVTRI-VWRSVKPFLMGKILYAPDSPAARQIIKNANTTFEELERLRNMGRAWEEVGPQIWSFFQDSVQINMLRDSIR---------NPTVMDHINKGLRNAAFTGQHILNFLYSGPEEDREQDMPNFDWRNIFNLTDQVIRL---INRYGECLVLDKF---SSISDEDQLTHRALNLLEEGKFWAGLVFVDMYSWTT-KVPPHVKVKIRMDIDVVERTNKIK--DRYWDPGPRADPMDDLRYIWGGFAYLQDMIEHGIIKTHTGKE-WPLGVYLQQMPYPCYVDDLFMLTLNRCFPIFMVLAWVYSVSMTVKSIVLEKEMRLKETLKAMGVTNRVLWCTWFIDTFFMMASSTALLTLIIMGGKVLNYSNPIILFLFLLTFTTATIMQCFLMSVFFNKANLAAACSGIIYFTLYLPHVVCFAWQDRITKDMKIMASLMSQVAFGFGTEYLSRYEEQGLGLQWDNIQTSLLEGDEFSFLNSIIMMAVDTVLYGVLAWYLDSVFPVPGKPTVEKPAFDNLVNNTDDQAKNHTAPEKPPEPPGSCKHGDIREKLEREKLQKRIVEEEINRSMSTDSSGKVFFEPEPSGLVAGVCVENLYKVFSGSSRPAVDGLSLTFYEGQITAFLGHNGAGKTTTMSVLTGMFPPTSGTAYIYGKDIRTDMDAIRKSLGMCPQHNIIFHHMTVAEHILFYSLLKGRPLPEAQLEVENMLEDLGLPHKRNEEAQNLSGGMQRKLSVAMAFVGGAKVVFLDEPTSGVDPYSRRSIWDLLLKYR---RTLILSTHHMDEADLLSDRVAIISQGRLYCCGSPLFLKNCLGAGFYLTLVRRIKEQPAPVRKEGQCDCTDDCSCKCSLCTKFKASDTEKPRVSERQMEGNIESITALVHHHVPEARLIEVIGQELTFLLPSRAFKHRSYASLFRELEETLADMGLSSFGVSDTSLEEVFLKVTADGEAAHINTASDTDRSHANG-------QSNSANVISKEGRGSQQ----------VKGFFLVVKQFFALLIKRFHHTTRSGKDFLAQIVLPASFVFISLMFTLIVPPFGEYPSLTLSPWMYGRQF------TFFSNE--------QMQSPDMRYFGEVLLNRPGFGTRCMVDE--PLEEYPC--NNITTEW------EMPLVNPMLIEMLSNSEWTDISPSPSCQCS-TPNKLTMLPVCPE-GAGGLPPPQRIQSTGDMLMDLTGRNISDYLVKTYPNLIRTSLKSKYWVNEQRYGGISVGGRLP-VLNLDPKSIQNAA--AQIGRLLNVTGGRYSKLALDEFATFLRYMETENNV--------KVWFNNKGWHAMVAFMNV-ANNAILRANLPPGVDLNEYGITAINHPLNLTKEQLSEVTVLTTSVDAVVAINVIFAMSFVPAGFVLYLIQERVTQAKHLQFVSGVSPLVYWTANFFWDMINYSVSAAMVVGIFIAFDKKCYTSPGNLQALIALLMLYGWSVTPMMYPMSYIFNVPSTAYVSLSCINLFIGINSSAITFILDLFD-STEALYKCNQVLKKALLVFPHFCLGRGLIDMAMNQAVMDVYARFGEDFSLDPFSWDFVGENLTFMAVEGFVYFILNILIQY----RFFLDHWMSDF-KKPPITD-EDVDVAKERERIYKGGSSNDILQIKDLSKTYTGTFR--------------------PAVDRICVGVSPGECFGLLGVNGAGKTTTF 1978 HSP 2 Score: 167.933 bits (424), Expect = 6.173e-41 Identity = 114/406 (28.08%), Postives = 193/406 (47.54%), Query Frame = 1 Query: 1966 VGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLP------QNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 VG + M ++ F+Y ++ ++ F FL +W+ + K P+ + + + ++ N L I +L K Y P ++ + + + LG NGAGKTTT +LTG +SG A + I T + + Q +G CPQ++ + D LT +H++ Y L+ + ++EI V I+ + L+E + SGG KRKLS A+A IG ++ LDEPT G+DP +RR +W+ ++ R ++LT+H M+E + L R+AI+ G +C G++ LK KFG+GY + + A+A M ES I Q +I S ++F+ + + ++I Y +S T+L++VF+ A Sbjct: 1871 VGENLTFMAVEGFVYFILNILIQYRF-----------FL---DHWMSDFKKP---PITDEDVDVAKERERIYKGGSSNDIL--QIKDLSKTYTGTFRPAVDRICVGVSPGECFGLLGVNGAGKTTTFKMLTGDIDVTSGEADVAGYSILTNILDVHQNMGYCPQFDAIDDLLTGREHLHLYARLRGVPESEISRVAEWGIQKLGLSEYAGCTAGTYSGGNKRKLSTAIAMIGCPALLLLDEPTTGMDPHSRRFLWNSIMSVIQGGRAVVLTSHSMEECEALCTRLAIMVNGTFKCLGTIQHLKYKFGDGY----------VVTMKIRAAKVGAVPDLNPAEAFM--ESTFPGCIQREKHYNTLQYEIASSSLAKIFQVVLANKEMLNIEDYSVSQTTLDQVFVNFA 2245 HSP 3 Score: 58.5362 bits (140), Expect = 8.746e-8 Identity = 25/82 (30.49%), Postives = 46/82 (56.10%), Query Frame = 1 Query: 22 SNQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQT 267 ++Q+R LLWKN+ +++R+ L +E+ P+++ L +R + Y+ C F K M S G +P++ +C N C+ T Sbjct: 4 NSQVRLLLWKNWTVRKRQKTRLFMEIMWPVVLFIGLVWLRKANPLYRQHECHFPNKAMPSSGVLPWIQGIVCNANNPCFQHT 85
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Zebrafish
Match: abca12 (ATP-binding cassette, sub-family A (ABC1), member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9790]) HSP 1 Score: 645.195 bits (1663), Expect = 0.000e+0 Identity = 494/1625 (30.40%), Postives = 799/1625 (49.17%), Query Frame = 1 Query: 682 LAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEW---------RLHFQTFLLDYISNNVFINDVKKFCKAYYSAN-PKICDAVNTLFNITNV----KSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQ--SFRNFLAVIIFN---ETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTF---TDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIP-------LMRNNNQNCEINHQA---------FESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLK--RMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILK-FVKIYIADARMMEESRLQWTIVLPQ-NDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNEN--------NMWSPASILDIPMVSPECDCSK----TGNQI---------------CNDLRSGGPPNSY----RIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTIST---FILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLF---FNYFYNSNSIVKHEYNALQWDIAGEKLFSLFS---LSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRN---TEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 L P++ G++ Y P+ + R+I+ K+N + +L+L + EW + T L + N++ V+ F + + + +N N+T + K +D ++ L + +C DR+ +S ++DK + R A IIF E L P + Y IR+ + + T DR P+ ++ + T + GF++LQE+I++A IE+ T N M PYPCY D++L +A P L+++W + +K +V+E+E RL EYMK+MG+N H+ +W I + L++ V+I+++ L+ I S V+F + Y S + +F+VS FF K N+A +SG ++Y + F+V I LE LS ++ + L S FS A +++ +E+ EG+Q+SN++ +P G L++IDS +Y +I Y+ VFPG+YG+A PW F +S+W P L N Q+ +++ E + L +G+S++ L K Y K ++NLNL+FYE +T+ LGHNGAGKTTT+S+LTG+F+P+ GT + D++ +D +R+++G+C QY+VLFD LT ++H+ Y +K K E++ + +I+ + D+ + LSGGMKRKLSI++AFIG SR+V LDEPT GVDP +RR IWD++I+++ +RTIIL+THH+DEA+ LSDR+A + +G L+CCGS +LK K +GY L+L K + + L+ F+ ++ DAR + LP N+ ++ L +LDQ++ ++ + YG+SDT+LEEVFL++ D + KE +S ++++ + A++ + + N K + ++GF L Q++IA+ +KR H+++RD+KG ++++ +P+ +++ MG LG I +SDL ++P++Y +D F+ N+N M S I + M P K TG+Q C++ P Y + SS + NLTG NI +YLL R YGG++F P ++ D P AN + +++W NS+G+ SMPAY N +N LRS L K Y IS+S+ P + + DL+ ++ + +A+ V+ G S + ASFVI+ V+E +GSKR Q +SGI+ YW+ NF +D+ Y+IP+++ +++ AF ++ +N A LLL+ +G + P MY S AF+ NL + T IST + L L N + ++ I + +FL+FPQF+ G G+M+L S V N D+ G S+F + ++L V R+ C KR +++ ED DV ER R+ S D+L+V +LTK+Y + K R AV +L G+ GECFGLLGVNGAGKTTTF Sbjct: 24 LKPMLLGQILYSPDTPMTREIMRKSNSSLHQFGDLKLYASEWIESSSYVLQSANILTQTLPILKNSLNSPFVQNFIRTQTGIDVSGMSATLNQFSNMTVLLEKNKFIMDQITTLSVLMMNLSSCVNFDRYRGFNSTDELDKQAEKLAQNRELYASIIFKLPKENSSSLPPN----IDYTIRMNIENVMRT------DRARNPFWVKDAYISATRTQRYSRGFVYLQESIERAIIEMQTGNAMDGPAVQMQAFPYPCYYKDEYLNSIAFAFPMALMISWVLFIAHFVKKLVHERELRLHEYMKMMGVNPISHFFAWLIESGAFLLVTVIILTIILKAGGILPRSDGFVLFLYLCDYGFSVLAVSFLVSSFFDKTNIAGLSGSLIYVISFFPFIVLIHLEDNLSFSVKSALSLFSPTCFSYASQYIARYEKQEEGIQWSNMYISPLAGDTSSFGWLCWLLLIDSLVYFIIGIYIRMVFPGKYGIAVPWYFPVTKSFWTDMFSCCSKTPKKIGRGLLFTNMMQDQSSMNKSKGKGSLVAKGEEDFSGLPVGVSLYGLTKTY--GKRNAVDNLNLSFYEGHVTSLLGHNGAGKTTTMSLLTGLFAPTVGTIEVYGMDMQMFIDDVRKEMGVCMQYDVLFDHLTTKEHLLLYAQIKAPHWTKQEVKEQVHKILMETDMHAHRHKRVGTLSGGMKRKLSISIAFIGGSRLVVLDEPTTGVDPCSRRSIWDIIIQHK-QERTIILSTHHLDEAEVLSDRIAFLERGGLKCCGSPFYLKDKLAKGYNLTLTKKVETADSKEKFDYEKLRDFIHSHLPDARQKDREMGDLVYALPPYTPQNASEYHSLLNSLDQNLDKLHLGCYGISDTTLEEVFLQLTRDDLEP---KESETWSVSESVIENDMF--ASRDSLSEDCNSMYLGEKASLTGNSTVRGFALGVQRVIAMLLKRVHHSRRDWKGLFSQVL----------------------LPV----LFVIAAMG--------------LGSI-------KSDLQHFPEIVLSPALYHVDEQYAFFSNQNPNTSRLVDTMMSYPGIDHVCMTDPTDPVCKGRPSTGSQTWVSGGNSSATFTTCKCSNQVQSCPAQGYDPPRKRCPSSQIVYNLTGVNIENYLLATANNFIRDRYGGWEFGKPLPIDLKMDML-DVP-------------ANR-------------------------TLSKVWYNSEGHHSMPAYLNSLNNFFLRSSLPPE--KRYQYAISISSHPYPGQVQDE--DLMVGGLVSILVALCVLTGYSIMTASFVIYEVQEHHTGSKRLQQISGISEPFYWIINFFYDMALYMIPVVLSVVMVAAFQLPAFTERQNLAAVTLLLVLFGFSTFPWMYLLSAMFKDTEMAFIGYVCINLFISVNTIISTSIIYFLGQLNQNDQSIQNIYQTMSNIFLVFPQFSFGNGLMELARVDMQVQILSGFGVDAYKNPFSMDVLGWMFISMFLQGFICFTLRLLLNKTLLRKVRRLFC-------WKRNAVQSYSPNEDEDVLDERLRVGRGDASSDILQVNHLTKVYQNFSK------------------RVQAVKSLSVGIPAGECFGLLGVNGAGKTTTF 1515 HSP 2 Score: 169.088 bits (427), Expect = 1.980e-41 Identity = 103/338 (30.47%), Postives = 182/338 (53.85%), Query Frame = 1 Query: 2194 ENLKLG--------ISIHNLVKLYP--SNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTE--MDSIRQ--KIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 E L++G + +++L K+Y S ++ + +L++ + LG NGAGKTTT +LTG SPS G+A I + D R +D R+ IG CPQ + L D LT E+H+YFY ++ + K +I V+ ++K + L N S S G +RKLS A+A IGN +++ LDEP++G+DP ++R +W ++ + ++LT+H M+E + L R+AI+ +G+ +C GSL +K +FG G+ + + ++ + F + D + +++ + + + S +F L+ + + I + +S T+L+EVF+ A Sbjct: 1455 ERLRVGRGDASSDILQVNHLTKVYQNFSKRVQAVKSLSVGIPAGECFGLLGVNGAGKTTTFKMLTGDISPSGGSAKIRDIDGRMVDIIDCRREGINIGYCPQVDALDDLLTGEEHLYFYARIRGISKRDISQVVNYLLKKLQLNYHRNNTSESYSCGTRRKLSTALALIGNPQILLLDEPSSGMDPRSKRHLWKIISEQVMGKCAVVLTSHSMEECEALCTRLAIMVKGQFRCLGSLQHIKNRFGSGFTVKMYLTGASYDVDMISNFMQQNFPGTCLKDN---HSNMVEYHVPVAPGGVAS-----IFSLLESNKTVLQIKHFSVSQTTLDEVFINFA 1784
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Zebrafish
Match: abca4b (ATP-binding cassette, sub-family A (ABC1), member 4b [Source:ZFIN;Acc:ZDB-GENE-050517-4]) HSP 1 Score: 612.838 bits (1579), Expect = 0.000e+0 Identity = 404/1118 (36.14%), Postives = 613/1118 (54.83%), Query Frame = 1 Query: 2179 FESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXX---------------------------------XXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD--PMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDH-----LLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDN-YQCFYRNENNMW-----SP--ASILDIPM-----VSPECDCSK----TGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKL-----------SRKLYGGFQFVLPSTFGWSSKLIGDSP-----FWEELRDFVNASQANHNQSNLNSLK-FIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNY-FYNSNSIVKHEY--NALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 FE EPE+L +G+S+ +LVK+Y P ++ LN+NFYESQIT+FLGHNGAGKTTT+SILTG+F P+SGTAYI DIRTEMD+IRQ +G+CPQ+N+LF LTVE+HI FY L+K + E E + +++D+ L K + + +LSGGM+RKLS+AMAF+G SRVV LDEPT+GVDP++RR IWDLL+KYR+ RT+IL+THHMDEAD LSDRVAIIS+GKL C GS +FLK FG G+YL+L++ + E+I + ++ +A+++E + T +LP R + LF+ L++ + +M + S+G+SDTSLEE+FLKV D N + E+ +L+ + N + L ++ + + S +KGF L+ +Q AL +KR+H+A R K FLA+++LP +L ++F I + + ++PW+ + TF E S + D G G RCM + L+N + C N ++ W SP ++IL P SP C+CS T +C +GG P R + D L ++T NISDYL+K + KL + + YGG + G ++ P + +L +N +++S ++ L+ F+ Y++ + + ++W N+KG+ +M ++ N+ +N +LR+ L A DYGI+ N P+ + + V ++ +AI VIF +SFIPASFV++L++ERV+ +K QFVSG++P VYW +NF WD++ Y + +++ IF+ FD + Y N A I LL YG ++ P MYP S+ + PSTA+V L+ NL +G ++ TFIL++ E N L N++LKKV L+FP F LGRG++D+ N + + E+ + +W+ G+ LF + ++I ++I+ + + Y + + ED DV ERER+ +D+L + +L+K Y + + AV+ +C GV GECFGLLGVNGAGKTTTF Sbjct: 969 FEPEPESLLIGVSVQDLVKMYNRYSRPAVDCLNMNFYESQITSFLGHNGAGKTTTLSILTGLFPPTSGTAYIYGRDIRTEMDAIRQSLGMCPQHNILFKHLTVEEHILFYSLMKGREHKEAEQEVENMLEDLGLPHKRDEEAQNLSGGMQRKLSVAMAFVGGSRVVILDEPTSGVDPYSRRSIWDLLLKYRT-GRTVILSTHHMDEADLLSDRVAIISKGKLHCSGSPLFLKNCFGVGFYLTLVRRMKDQRKKENECDCASECSCTCSTCTRYKEESQALQPERVLDGNVESITTLIHHHVPEAKLIEMIGQEMTYLLPNKGFKYRAYASLFRELEETLGDMGLSSFGISDTSLEEIFLKVTADGEAANSSVTPEQW-------MLQQRKNGNGFMKDTGLAEDANGVGASLESDSSEGRASRQVKGFSLVLKQFHALLVKRFHHATRSHKDFLAQIVLPASFVLIALVFTMIVPPFGEYPCLTLTPWMYGPQF------TFISNEQPSHPKMKHFIQTLLKDPG-MGTRCM--ANQPLENIFTCL--NSSSDWEVPPVSPEVSNILSSPEWDSRNPSPSCECSTDLKLTMLPMC-PAGAGGLPPRQRKEPTGDILLDMTNRNISDYLVKTYTKLIKTSLKSKYWVNEQRYGGI------SVGGRLPILDVDPEEIQNIFSQLGRMMNIRGGRYSKSAMDELETFLHYMESEYNV--------KVWYNNKGWHAMASFLNVANNAILRAYLPPHA-NPSDYGITAINHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAMSFIPASFVLYLIQERVTKAKHLQFVSGVSPLVYWFANFFWDMLNYSVSTAMVVAIFVGFDKKCYTSPTNLPALIALLCLYGWSVTPMMYPLSYMFNVPSTAYVSLSCINLFIGINSSAITFILELFENNRSLLM-FNEVLKKVLLVFPHFCLGRGLIDMAMNQAVTDVYARFGEEFSMDPFRWNFVGKNLFCMAVEGFVYFIFNLLIQY----KFFLHHWISDY--GMSLGTDEDDDVAQERERIYKGGNKNDILLIRDLSKTY--------------------RRRKRPAVDKICVGVPAGECFGLLGVNGAGKTTTF 2024 HSP 2 Score: 254.988 bits (650), Expect = 1.454e-67 Identity = 167/594 (28.11%), Postives = 301/594 (50.67%), Query Frame = 1 Query: 517 NELGEIICGSPE--------------NDFKLFMRNFIKNQRRKRSLLT-------CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVN-----------------------------TLFNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSFR-----NFLAVIIFNETFQYLT--PKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSES 2127 +++ ++ CG PE N++K F+ I N R S + C + Q+ N I K ++N + PL+ GK+ Y P+ +R+II+ AN TF+ L+ L+ W L D+ N++ +N ++ + NP + D ++ T F+ ++V D ++F+ R C LD+F+ D + +T+Q+ F A ++F + + + P++ F +IR+ + ++ T K K DR+W P PR + D +Y+ GF +LQ+ I+ ++L T ++ +G + MPYPCY+ D F+ L P +V+AW SV++++KSIV EKE RLKE +K MG++N V W +WFI + +++ +++ + K+ S+ ++F + + ++ I Q F++SVFF+KAN+A+ GI+YFT Y+ + + ++ M + LLS VAF +++ +E+ G+Q+ N+ +P E + I +M++D+ +Y ++ WY++ VFPGQYG+ +P+ F SYW+ SE+ Sbjct: 317 SKVSDLFCGYPEGEGTRVFSFNWYEDNNYKAFLG--INNSRGHDSYIYDKTATPFCNALMQNLESNPITKI-VWNSVKPLVMGKILYTPDSPAVRKIIKSANTTFEELERLQKIGKVWE-ELGPQLWDFFQNSIQMNMIRDTLR-----NPTVMDFLDRRLRETEFSTKDILNFLHNGPEGERFMNMTSFDWSDVFRLADQAIRMFN---RYSECISLDKFV---GHMDENLMTHQALHLLGENKFWAGLVFMDMYPWTIELPRHVKF---KIRMDIDAVERTNKIK--DRYWDPGPRADPVEDHRYIWGGFAYLQDLIEHGILKLHTGHD-WPLGVYLQQMPYPCYVDDMFMLTLNRCFPIFMVLAWIYSVSMVVKSIVLEKEMRLKETLKAMGVSNGVIWYTWFIDSFIMMTASTALLTGIVMAGKVLNYSNPIILFLFLLTFTVATIMQCFLMSVFFNKANLAAACSGIIYFTLYLPHIFCFAWQDRITKDMKLAVSLLSPVAFGFGTEYLSRYEEQGLGLQWDNIGTSPLEGDEYSFFTSIRMMLLDAVLYGVLAWYLDNVFPGQYGIGRPFYFPLQSSYWLKPSPPSET 889 HSP 3 Score: 163.696 bits (413), Expect = 1.238e-39 Identity = 83/226 (36.73%), Postives = 127/226 (56.19%), Query Frame = 1 Query: 2218 IHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGY 2895 I +L K Y K P ++ + + + LG NGAGKTTT +LTG +SG + I + + + Q +G CPQ++ + + LT +H+Y Y L+ + ++EI V I+ + L+E + SGG KRKLS A+A IG +V LDEPT G+DP +RR +W ++ R ++LT+H M+E + L R+AI+ G +C G++ LK KFG GY Sbjct: 1982 IRDLSKTYRRRKRPAVDKICVGVPAGECFGLLGVNGAGKTTTFKMLTGDTDVTSGELSVAGYSILSNILDVHQNMGYCPQFDAIDELLTGREHLYLYARLRGIPESEISRVAEWGIQKLGLSEYAGNCAGTYSGGNKRKLSTAIAMIGCPPLVLLDEPTTGMDPHSRRFLWTAILSIIRDGRAVVLTSHSMEECEALCTRLAIMVNGTFKCLGTIQHLKYKFGGGY 2207 HSP 4 Score: 53.9138 bits (128), Expect = 2.451e-6 Identity = 24/79 (30.38%), Postives = 40/79 (50.63%), Query Frame = 1 Query: 22 SNQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY 258 Q+R LLWKN+ L++R+ +E+ P+ + L +R + Y+ C F K M S G +P++ C N C+ Sbjct: 4 GRQIRLLLWKNWTLRKRQKIRFFVEILWPVFLFIGLVWLRRANPLYRQHECHFPSKAMPSAGILPWIQGIFCNANNPCF 82
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Zebrafish
Match: abca1a (ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]) HSP 1 Score: 582.408 bits (1500), Expect = 8.664e-174 Identity = 321/841 (38.17%), Postives = 492/841 (58.50%), Query Frame = 1 Query: 514 YNELGEIICGSPE--------------NDFK-LFMRNFIKNQRRKRSLLT------CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSK-------LFSW-------------IERGLNCTELDRFIPLDSLKDIDKLTNQSFR-----NFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYY 2898 Y + I+CG PE N++K LF N + S+ C + + + I + ++ L PL+ GK+ Y P+ ++II + N TF+ L LR W + + +++ N+ ++ V+ + SA T + + +V ++ S+ ++W I R + C LD+ P+ + ++L N+S R F A I+F + Q T ++Y+IR+ + ++ T K K D +W P PR + F D +Y+ GF +LQ+ I+ I +T ++ + G + MPYPCY+ D FL+ ++ +P + +AW SV ++IK +VYEKE+RLKE M++MGL+N + W+SWFIS+++ L+I ++ + L++ + S V++ + + + I Q F++S FS+AN+A+ GGI+YFT Y+ +V+ + + + LLS VAF ++ +E+ G+Q+SNL +P + + + I LM+ DS +Y ++TWY+EAVFPGQYG+ +PW F +SYW K + + N +N E E EP ++ G+ I NL+K+Y + K+ V + L L FYE QIT+FLGHNGAGKTTT+SILTG+F P+SGTAYI +DIRT++++IRQ +G+CPQ+NVLF LTVE+HI+FY LK + +++S + +I+ D+ L K + S LSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP+ARRGIWDLL+KYR RTIIL+THHMDEAD L DR+AIIS GKL C GS +FLK + G GYY Sbjct: 304 YQAVSRIVCGHPEGGGLKIKSLNWFEDNNYKALFGNNGNDSDSEPASVYDNSSTPYCNNLMKGLESSPISRM-IWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGMWE-EMRPKIWNFMENSEEMDLVRTLLQNNASARFFNAKLSGTEWRVEDVSRFLSKSSEDTRPHGTAYTWREVFNETDQAIQTISRFMECVNLDKLEPV---ANEERLVNKSMRLLDDRKFWAGIVFPD-MQSNTSDLPLNVNYKIRMDIDNVERTNKIK--DGYWDPGPRADPFEDLRYIWGGFTYLQDVIEHGIIRALTGSKE-KTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPGVIYLFLSSFAVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQNYVGFGAKIVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPMQEDSYNLTTSICLMLFDSVLYAVMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGE-KCGWTTSVPSNRKENAEA--VCIEEEPAHIDPGVYIENLMKIYSNGKVAV-DGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIQGKDIRTDLNAIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLSAEKVKSEMEQIVMDLGLPHKRTSRSNQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKYR-QGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYY 1130 HSP 2 Score: 303.523 bits (776), Expect = 1.807e-82 Identity = 256/827 (30.96%), Postives = 418/827 (50.54%), Query Frame = 1 Query: 2977 YIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD------------PMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQ---NPDQKQSKFLDQSD----HLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKL-----ESEYRSDLGESGIRCMNPSIYRLD----------NYQCFYRNENNMWSPASILDIPMVSPECDCSKTGNQICNDLRSGGPPNSYRIMTSSDK-LNNLTGYNISDYLLKNFPK-----LSRKL------YGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHN-QSNLNSLKFIDYLQKTFKIYGIKT-SFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYN----ALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 ++ AR++E+ + T VLP F ELF +D + ++SI SYG+SDT+LEE+FLKVA+D P + N+ ++ + + T+ + N +P+ +++ +LD +D + +KG+ L +QQ +AL KR YA+R KGF A+++LP + + ++F I P P L + E TF + N+L +S +D G + S D + + + N N WS ++ P EC C + G +I + D+ L NL+G NISDYL+K + + L KL YGGF +T P +EL D ++ ++ + +S + +F+ L TF I G+ T + +IW N+KG+ S+ ++ N+ N + + +GI+ N P+ + + + +++ ++I VIF +SF+PASFV+FL++ERV+ +K QF+SG+ P++YW++NF+WD+ YI+P ++IIIF+ F ++Y+ S N LLL+ YG +I P MYP SFF PSTA+VVL + N+L+G ++STF+L++ N + INDILK VFLIFP F LGRG++D+ N ++++ + N L WD+ G+ LF++ + ++ + ++I+ C K + S +++ ED DV ER+R+ D+L + LTK+Y + ++ AV+ LC G+ GECFGLLGVNGAGKT+TF Sbjct: 1197 HVPTARLVEDLGHEITYVLPYESAKDGAFVELFHEIDDRLTDLSISSYGISDTTLEEIFLKVAEDCGVDAETSDGTLPARR--NRRHAFGDHQSCLKPF------TEDDFDFNDSEGDPESRETDWLDGADGKGSYQVKGWSLKRQQFVALLWKRLLYARRSRKGFFAQIVLPAVFVCIALVFSLIVP------PFGKYPSLALEPSMYEEQFTFISNDAPEDRHTNRLLDALKDSPAYTDQCTDGKNTASRSCPIKDGEWLVPEVTESIEAIFLNGN--WS----MENPSPLCECSCEGRKKMLPECPPGAGGLPPPQIKVTHDETLQNLSGRNISDYLVKTYAQIIGKSLKNKLWVNEFRYGGFSLGARNTQAL--------PPGDELTDAISHIRSRFSLESGTAADRFLGSLS-TF-IRGLDTNNNVKIWFNNKGWHSIGSFLNVM-NNAVLRANLPPGLDRSKFGINAFNHPLNLTKEQLSHVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFVCFQQEAYVSSTNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGSN--EIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAM-ADALERFGENRFRSPLAWDMVGKNLFAMAIEGVIFFSITVLIQYR-----FCIKAR-SLSTKLKPIGEEDEDVARERQRILGGGGQTDILELRQLTKVY--------------------KRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTF 1963 HSP 3 Score: 196.438 bits (498), Expect = 1.123e-49 Identity = 109/322 (33.85%), Postives = 181/322 (56.21%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESR--LQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 + + L K+Y + P ++ L + + LG NGAGKT+T +LTG +SG AY+ + TE+D + Q +G CPQ++ + D LT +H+ FY +L+ + + E+ V I+ + L + ++ + SGG RKLS AMA IG VVFLDEPT G+DP ARR +W+ ++ R+++LT+H M+E + L R+AI+ G+ +C GS+ LK KFG+GY + ++ E +++F++ + + + E+ R LQ+ + + +R F L KN +Q + I Y +S T+L++VF+ A D Sbjct: 1919 LELRQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTSGEAYLAGNSVLTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCKVADWGIRKLGLMKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRALWNCILSIIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNKFGDGY-----TIILRVAGADPRLEPVMEFIERELPGSTLKEKHRNMLQYQLSSSLTSL-ARIFNILSKNKEQ----LHIEDYSVSQTTLDQVFVNFAKD 2230 HSP 4 Score: 66.6254 bits (161), Expect = 3.144e-10 Identity = 32/80 (40.00%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 19 ISNQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY 258 +S QL LLWKNF +RR+ LL+E+ PL + FIL +VR Y+ C F K M S G +P++ +C N C+ Sbjct: 3 VSTQLGLLLWKNFTYRRRQTIQLLVEIIWPLFIFFILISVRLYYPPYEQHECHFPNKAMPSAGTLPWVQGIICNANNPCF 82
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 895.19 bits (2312), Expect = 0.000e+0 Identity = 644/1975 (32.61%), Postives = 993/1975 (50.28%), Query Frame = 1 Query: 25 NQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY---------------DQTQINWL-------------GTNLNEFHVFIGNI------------------------------------TEIYNSLPSGALNVPK--------FMKWITSNPNEFIR-----LQNSFSYISKRIVPLISTV---NKVM---SENETTIESG-YNELGEIICGSPE--------------NDFK-LFMRNFIKNQRRKRSLLT--------CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEW---RLHFQTFL-----LDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIE-------------RGLNCTELDRFIPLDSLKD-IDK---LTNQSFRNFLAVIIFNETFQYLTPKNTTFL----SYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGS-------------LVFLKRK------------------------------FGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPM-------NKLINKEKSY-YSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSD----HLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWS----PASILDIPM--------VSPECDCSKTGNQ----ICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYF-------YNSNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESG--IVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 QL LLWKNF +RR+ L++E+ PL + FIL +VR S Y+ C F K M S G +P++ +C N C+ +++ ++ L T++ + H F+GN+ +I +LP LN+ + +K ITS P F++ L +S + ++K ++ + S +VM S N T S Y + I+CG PE N++K LF N + S + C + Q+ + + + ++ L PL+ GK+ Y P+ + ++ + N TF+ L R W R + F+ +D I + K F ++ + ++ + +SW E R + C LD+ P+ + + IDK L N+ R F A I+F + P+ T L Y+IR+ + ++ T K K D +W P PR + F D +Y+ GF +LQ+ ++QA I + T E G + MPYPCY+ D FL+ ++ +P + +AW SV V+IK IVYEKE+RLKE M++MGL+N + W+SWFIS+++ L++ ++ + L+ + S +VVF + + + I Q F++S FS+AN+A+ GGI+YFT Y+ +V+ + + + T+ LS VAF + E+ GVQ+ NL ++P E + + +M+ D+ +Y ++TWY+EAVFPGQYG+ +PW F +SYW + P + E EP +L LG+SI NLVK+Y + K ++ L LNFYE QIT+FLGHNGAGKTTT+SILTG+F P++GTAYI+ +DIRTE++SIRQ +G+CPQ+NVLFD+LTVE+HI+FY LK + + ++++ + +++ DV L K + LSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP++RRGIW+LLIKYR RTIIL+THHMDEAD L DR+AIIS GKL C GS L +KR G G S + I + ++ +AR++E+ + T VLP F ELF +D ++++ I SYG++DT+LEE+FLKVADD L + K Y + + + L+ +A T + +P+ +++ +L D + LK + L++QQ AL KR YAKR KGF A+++LP + +L ++F I K +++ PW M E F G L++ D G CM + + C E WS S++D+ + SP C+CS + IC G PP R +SD L NLTG NISDYL+K + ++ K YGGF + AS + N + I++++K ++ ++ ++ +W N+KG+ ++ A+ N+ +N +LRS+L + YGI+ N P+ + + + +++ ++I VIF +SF+PASFV+FL++ERVS +K Q +SG+ P +YW++NF+WD+ Y++P ++IIIFI F SY+ S N LLL+ YG +I P MYP SF PSTA+VVL + NL +G +++TF+L++ N L IN+ILK V LIFP F LGRG++D+ N + N V + + WD+ G LF++ + ++ + ++I+ I R + KL ED DV ER+R++ + +D+L + LTKIY + R+ AV+ LC G+ GECFGLLGVNGAGKTTTF Sbjct: 5 TQLGLLLWKNFTYRRRQTLQLVVEVAWPLFIFFILISVRLSYPPYEQHECHFPNKAMPSAGTLPWVQGIICNANNPCFRYPTPGESPGVVGNFNRSIVSRLFTDARKLLLYSHKDTSVKDMHKFLGNLHNYRGTGFQIHLKDLCNSTRLAEYVTIHNEVVANLSQKIICALPEEKLNLLEQEFRSNVDLLKPITSFP--FLKDITDSLLHSLADLAKEVMTMKSWAEMRQEVMFLTSGNATASPSTLYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGGEGDNSTDEDSQVAYDNSTTPYCNDLMQNLESSPLYRM-IWRALKPLLVGKILYTPSTPATQMLMSEVNKTFQELSVFRDLGAMWEEVRPQIKNFMESSQEMDLIRTLLTNKGSKTFLDQQLNSTGWTTENISRFLAKETADVETEN-GPFYSWREALNETDRVVLTLSRFMECVNLDKLEPVATEEMLIDKSMELLNE--RKFWAGIVFMDM-----PEEETELPHHVKYKIRMDIDNVERTNKIK--DGYWDPGPRADPFEDMRYIWGGFSYLQDVVEQAIIRVQTGVEK-RTGIYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAALLVLILKTGNLLPYSDPSVVFVFLSVFAVVTISQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGYTLKIFASFLSPVAFGFGCEVFALLEEQGVGVQWDNLLESPLEENGYNITTSGFMMLFDTLLYGIMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEECKEYNQP--HTVQKGSSEGMFCMEEEPSHLPLGVSIQNLVKIYRNGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTTGTAYIMKKDIRTELNSIRQNLGVCPQHNVLFDALTVEEHIWFYARLKGLSEEKVKAEMEQMVNDVGLPHKKKYKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLIKYR-QGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKRDNDSSLSSCRNSSSTMSYLKKEDSVSQSSSDAGLGSDHESDTMTIGKYKSLTDVSAISNLINKHVPEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGIADTTLEEIFLKVADDTGVDAETSDGTLPARRKRYAFGDHQSCLRPFTEDDAFDTNDS-DMDPESRETDYLSGIDGKGSYQLKSWNLMRQQFTALLWKRLLYAKRSRKGFFAQIVLPAVFVLIALVFSLIVPPFGKYPSLELEPW-----MYDEQYTFFSNDAPDDQGTQALLKALI--DKPGFGTACMEG--HSVMKVSC--SGEEEEWSTQFVSQSVMDLFLNGNWTMENPSPSCECSSDKRKKMLPICPPGAGGLPPFQRR-QNTSDILQNLTGRNISDYLVKTYSQIIEKRYGGFS--------------------------LGASNSPALPPNEEVVASINHIKKRLELPQVEYLYSVVWFNNKGWHAVGAFLNVMNNAILRSKL-REGEDPASYGITAFNHPLNLTKEQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMQCISGVKPVIYWLANFVWDMCNYVVPATLVIIIFICFQQDSYVSSSNLPVLALLLLLYGWSITPLMYPASFIFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNN--KLSNINEILKSVLLIFPHFCLGRGLIDMVKNQAMADALERFGENRFV----SPMSWDLVGRNLFAMAVEGVVFFAITLMIQYRFFIKPRPVNAKLPPVV--------DEDEDVARERQRINEGGR-NDILELKGLTKIYRM--------------------KRKPAVDRLCVGIPPGECFGLLGVNGAGKTTTF 1887 HSP 2 Score: 174.481 bits (441), Expect = 7.871e-43 Identity = 104/319 (32.60%), Postives = 172/319 (53.92%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADA------RMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEV 3150 + + L K+Y + P ++ L + + LG NGAGKTTT +LTG ++G A++ N I + + Q +G CPQ++ + + LT +H+ Y LL+ + + E+ V I+ + L + + + SGG KRKLS A+A IG VVFLDEPT G+DP ARR +W+ + R+++LT+H M+E + L R+AI+ G+ +C GS+ LK +FG+GY + + +N LK V+ + + A + S LQ+ + Q+ + +R F+ L KN + + I Y +S T+L++V Sbjct: 1843 LELKGLTKIYRMKRKPAVDRLCVGIPPGECFGLLGVNGAGKTTTFKMLTGDTDVTAGEAFLKNHSILRNIHEVHQNMGYCPQFDAINELLTGREHLELYALLRGVPEKEVCKVAEWAIRKLGLVKYSEKHAGNYSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFKCLGSVQHLKNRFGDGYTIIVRIAGSNPD---------LKPVEEFFSHAFPGSVLKEKHRSMLQYQLRSSQSSL-ARIFSILSKNKKR----LHIEDYSVSQTTLDQV 2147
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 870.537 bits (2248), Expect = 0.000e+0 Identity = 593/1726 (34.36%), Postives = 911/1726 (52.78%), Query Frame = 1 Query: 514 YNELGEIICGSPE--------------NDFK-LFMRNFIKNQRRKRSLLT--------CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEW---RLHFQTFL-----LDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIE-------------RGLNCTELDRFIPLDSLKD-IDK---LTNQSFRNFLAVIIFNETFQYLTPKNTTFL----SYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIP--LMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXX------------------------------------XXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPM-------NKLINKEKSY-YSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSD----HLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWS----PASILDIPM--------VSPECDCSKTGNQ----ICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLN------SLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYN----ALQWDIAGEKLFSLFSLSIGWWIVLIIIESG--IVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 Y + I+CG PE N++K LF N + S + C + Q+ + + + ++ L PL+ GK+ Y P+ + ++ + N TF+ L R W R + F+ +D I + K F ++ + ++ + +SW E R + C LD+ P+ + + IDK L N+ R F A I+F + P+ T L Y+IR+ + ++ T K K D +W P PR + F D +Y+ GF +LQ+ ++QA I + T E G + MPYPCY+ D FL+ ++ +P + +AW SV V+IK IVYEKE+RLKE M++MGL+N + W+SWFIS+++ L++ ++ + L+ + S +VVF + + + I Q F++S FS+AN+A+ GGI+YFT Y+ +V+ + + + T+ LS VAF + E+ GVQ+ NL ++P E + + +M+ D+ +Y ++TWY+EAVFPGQYG+ +PW F +SYW + P + + +++ C E EP +L LG+SI NLVK+Y + K ++ L LNFYE QIT+FLGHNGAGKTTT+SILTG+F P++GTAYI+ +DIRTE++SIRQ +G+CPQ+NVLFD+LTVE+HI+FY LK + + ++++ + +++ DV L K + LSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP++RRGIW+LLIKYR RTIIL+THHMDEAD L DR+AIIS GKL C GS +FLK + G GYYL+L+K + + + I + ++ +AR++E+ + T VLP F ELF +D ++++ I SYG++DT+LEE+FLKVADD L + K Y + + + L+ +A T + +P+ +++ +L D + LK + L++QQ AL KR YAKR KGF A+++LP + +L ++F I K +++ PW M E F G L++ D G CM + + C E WS S++D+ + SP C+CS + IC G PP R +SD L NLTG NISDYL+K + ++ K YGGF + G S +SP + V + NH + L + +F+D K K + ++W N+KG+ ++ A+ N+ N + + YGI+ N P+ + + + +++ ++I VIF +SF+PASFV+FL++ERVS +K Q +SG+ P +YW++NF+WD+ Y++P ++IIIFI F SY+ S N LLL+ YG +I P MYP SF PSTA+VVL + NL +G +++TF+L++ N L IN+ILK V LIFP F LGRG++D+ N ++++ + N + WD+ G LF++ + ++ + ++I+ I R + KL ED DV ER+R++ + +D+L + LTKIY + R+ AV+ LC G+ GECFGLLGVNGAGKTTTF Sbjct: 297 YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGGEGDNSTDEDSQVAYDNSTTPYCNDLMQNLESSPLYRM-IWRALKPLLVGKILYTPSTPATQMLMSEVNKTFQELSVFRDLGAMWEEVRPQIKNFMESSQEMDLIRTLLTNKGSKTFLDQQLNSTGWTTENISRFLAKETADVETEN-GPFYSWREALNETDRVVLTLSRFMECVNLDKLEPVATEEMLIDKSMELLNE--RKFWAGIVFMDM-----PEEETELPHHVKYKIRMDIDNVERTNKIK--DGYWDPGPRADPFEDMRYIWGGFSYLQDVVEQAIIRVQTGVEK-RTGIYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAALLVLILKTGNLLPYSDPSVVFVFLSVFAVVTISQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGYTLKIFASFLSPVAFGFGCEVFALLEEQGVGVQWDNLLESPLEENGYNITTSGFMMLFDTLLYGIMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEECKEYNQPHTVQKGSSEVC------MEEEPSHLPLGVSIQNLVKIYRNGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTTGTAYIMKKDIRTELNSIRQNLGVCPQHNVLFDALTVEEHIWFYARLKGLSEEKVKAEMEQMVNDVGLPHKKKYKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLIKYR-QGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKRDNDSSLSSCRNSSSTMSYLKKEDSVSQSSSDAGLGSDHESDTMTIDVSAISNLINKHVPEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGIADTTLEEIFLKVADDTGVDAETSDGTLPARRKRYAFGDHQSCLRPFTEDDAFDTNDS-DMDPESRETDYLSGIDGKGSYQLKSWNLMRQQFTALLWKRLLYAKRSRKGFFAQIVLPAVFVLIALVFSLIVPPFGKYPSLELEPW-----MYDEQYTFFSNDAPDDQGTQALLKALI--DKPGFGTACMEG--HSVMKVSC--SGEEEEWSTQFVSQSVMDLFLNGNWTMENPSPSCECSSDKRKKMLPICPPGAGGLPPFQRR-QNTSDILQNLTGRNISDYLVKTYSQIIEKRYGGF------SLGAS-----NSPALPPNEEVV--ASINHIKKRLELPQNGAANRFLDSFGAFMKGLDTKDN-VKVWFNNKGWHAVGAFLNVM-NNAILRSKLREGEDPASYGITAFNHPLNLTKEQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMQCISGVKPVIYWLANFVWDMCNYVVPATLVIIIFICFQQDSYVSSSNLPVLALLLLLYGWSITPLMYPASFIFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNN--KLSNINEILKSVLLIFPHFCLGRGLIDMVKNQAM-ADALERFGENRFVSPMSWDLVGRNLFAMAVEGVVFFAITLMIQYRFFIKPRPVNAKLPPVV--------DEDEDVARERQRINEGGR-NDILELKGLTKIYRM--------------------KRKPAVDRLCVGIPPGECFGLLGVNGAGKTTTF 1943 HSP 2 Score: 177.948 bits (450), Expect = 7.018e-44 Identity = 106/324 (32.72%), Postives = 175/324 (54.01%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADA------RMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 + + L K+Y + P ++ L + + LG NGAGKTTT +LTG ++G A++ N I + + Q +G CPQ++ + + LT +H+ Y LL+ + + E+ V I+ + L + + + SGG KRKLS A+A IG VVFLDEPT G+DP ARR +W+ + R+++LT+H M+E + L R+AI+ G+ +C GS+ LK +FG+GY + + +N LK V+ + + A + S LQ+ + Q+ + +R F+ L KN + + I Y +S T+L++VF+ A Sbjct: 1899 LELKGLTKIYRMKRKPAVDRLCVGIPPGECFGLLGVNGAGKTTTFKMLTGDTDVTAGEAFLKNHSILRNIHEVHQNMGYCPQFDAINELLTGREHLELYALLRGVPEKEVCKVAEWAIRKLGLVKYSEKHAGNYSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFKCLGSVQHLKNRFGDGYTIIVRIAGSNPD---------LKPVEEFFSHAFPGSVLKEKHRSMLQYQLRSSQSSL-ARIFSILSKNKKR----LHIEDYSVSQTTLDQVFVNFA 2208 HSP 3 Score: 65.855 bits (159), Expect = 7.351e-10 Identity = 31/77 (40.26%), Postives = 44/77 (57.14%), Query Frame = 1 Query: 28 QLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY 258 QL LLWKNF +RR+ L++E+ PL + FIL +VR S Y+ C F K M S G +P++ +C N C+ Sbjct: 6 QLGLLLWKNFTYRRRQTLQLVVEVAWPLFIFFILISVRLSYPPYEQHECHFPNKAMPSAGTLPWVQGIICNANNPCF 82
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 862.448 bits (2227), Expect = 0.000e+0 Identity = 582/1728 (33.68%), Postives = 900/1728 (52.08%), Query Frame = 1 Query: 514 YNELGEIICGSPE--------------NDFK-LFMRNFIKNQRRKRSLLT--------CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEW---RLHFQTFL-----LDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIE-------------RGLNCTELDRFIPLDSLKD-IDK---LTNQSFRNFLAVIIFNETFQYLTPKNTTFL----SYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIP--LMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXX------------------------------------XXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPM-------NKLINKEKSY-YSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSD----HLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFY--RNENNMWS----PASILDIPM--------VSPECDCSKTGNQ----ICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQF------VLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYN----ALQWDIAGEKLFSLFSLSIGWWIVLIIIESG--IVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 Y + I+CG PE N++K LF N + S + C + Q+ + + + ++ L PL+ GK+ Y P+ + ++ + N TF+ L R W R + F+ +D I + K F ++ + ++ + +SW E R + C LD+ P+ + + IDK L N+ R F A I+F + P+ T L Y+IR+ + ++ T K K D +W P PR + F D +Y+ GF +LQ+ ++QA I + T E G + MPYPCY+ D FL+ ++ +P + +AW SV V+IK IVYEKE+RLKE M++MGL+N + W+SWFIS+++ L++ ++ + L+ + S +VVF + + + I Q F++S FS+AN+A+ GGI+YFT Y+ +V+ + + + T+ LS VAF + E+ GVQ+ NL ++P E + + +M+ D+ +Y ++TWY+EAVFPGQYG+ +PW F +SYW + P + + +++ C E EP +L LG+SI NLVK+Y + K ++ L LNFYE QIT+FLGHNGAGKTTT+SILTG+F P++GTAYI+ +DIRTE++SIRQ +G+CPQ+NVLFD+LTVE+HI+FY LK + + ++++ + +++ DV L K + LSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP++RRGIW+LLIKYR RTIIL+THHMDEAD L DR+AIIS GKL C GS +FLK + G GYYL+L+K + + + I + ++ +AR++E+ + T VLP F ELF +D ++++ I SYG++DT+LEE+FLKVADD L + K Y + + + L+ +A T + +P+ +++ +L D + LK + L++QQ AL KR YAKR KGF A+++LP + +L ++F I K +++ PW+ + TF+ + + G + + ++ + + E WS S++D+ + SP C+CS + IC G PP R +SD L NLTG NISDYL+K + ++ K YGGF LPS G K+ G F+ N ++W N+KG+ ++ A+ N+ N + + YGI+ N P+ + + + +++ ++I VIF +SF+PASFV+FL++ERVS +K Q +SG+ P +YW++NF+WD+ Y++P ++IIIFI F SY+ S N LLL+ YG +I P MYP SF PSTA+VVL + NL +G +++TF+L++ N L IN+ILK V LIFP F LGRG++D+ N ++++ + N + WD+ G LF++ + ++ + ++I+ I R + KL ED DV ER+R++ + +D+L + LTKIY + R+ AV+ LC G+ GECFGLLGVNGAGKTTTF Sbjct: 264 YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGGEGDNSTDEDSQVAYDNSTTPYCNDLMQNLESSPLYRM-IWRALKPLLVGKILYTPSTPATQMLMSEVNKTFQELSVFRDLGAMWEEVRPQIKNFMESSQEMDLIRTLLTNKGSKTFLDQQLNSTGWTTENISRFLAKETADVETEN-GPFYSWREALNETDRVVLTLSRFMECVNLDKLEPVATEEMLIDKSMELLNE--RKFWAGIVFMDM-----PEEETELPHHVKYKIRMDIDNVERTNKIK--DGYWDPGPRADPFEDMRYIWGGFSYLQDVVEQAIIRVQTGVEK-RTGIYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAALLVLILKTGNLLPYSDPSVVFVFLSVFAVVTISQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGYTLKIFASFLSPVAFGFGCEVFALLEEQGVGVQWDNLLESPLEENGYNITTSGFMMLFDTLLYGIMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEECKEYNQPHTVQKGSSEVC------MEEEPSHLPLGVSIQNLVKIYRNGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTTGTAYIMKKDIRTELNSIRQNLGVCPQHNVLFDALTVEEHIWFYARLKGLSEEKVKAEMEQMVNDVGLPHKKKYKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLIKYR-QGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKRDNDSSLSSCRNSSSTMSYLKKEDSVSQSSSDAGLGSDHESDTMTIDVSAISNLINKHVPEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGIADTTLEEIFLKVADDTGVDAETSDGTLPARRKRYAFGDHQSCLRPFTEDDAFDTNDS-DMDPESRETDYLSGIDGKGSYQLKSWNLMRQQFTALLWKRLLYAKRSRKGFFAQIVLPAVFVLIALVFSLIVPPFGKYPSLELEPWMY------DEQYTFFSNDAPD----------------DQGTQALLKALIDKPGFGTAFSCSGEEEEWSTQFVSQSVMDLFLNGNWTMENPSPSCECSSDKRKKMLPICPPGAGGLPPFQRR-QNTSDILQNLTGRNISDYLVKTYSQIIEKRYGGFSLGASNSPALPSVVGKLLKIFG---------AFMKGLDTKDN--------------------------VKVWFNNKGWHAVGAFLNVM-NNAILRSKLREGEDPASYGITAFNHPLNLTKEQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMQCISGVKPVIYWLANFVWDMCNYVVPATLVIIIFICFQQDSYVSSSNLPVLALLLLLYGWSITPLMYPASFIFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNN--KLSNINEILKSVLLIFPHFCLGRGLIDMVKNQAM-ADALERFGENRFVSPMSWDLVGRNLFAMAVEGVVFFAITLMIQYRFFIKPRPVNAKLPPVV--------DEDEDVARERQRINEGGR-NDILELKGLTKIYRM--------------------KRKPAVDRLCVGIPPGECFGLLGVNGAGKTTTF 1880 HSP 2 Score: 174.481 bits (441), Expect = 8.621e-43 Identity = 84/228 (36.84%), Postives = 133/228 (58.33%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGY 2895 + + L K+Y + P ++ L + + LG NGAGKTTT +LTG ++G A++ N I + + Q +G CPQ++ + + LT +H+ Y LL+ + + E+ V I+ + L + + + SGG KRKLS A+A IG VVFLDEPT G+DP ARR +W+ + R+++LT+H M+E + L R+AI+ G+ +C GS+ LK +FG+GY Sbjct: 1836 LELKGLTKIYRMKRKPAVDRLCVGIPPGECFGLLGVNGAGKTTTFKMLTGDTDVTAGEAFLKNHSILRNIHEVHQNMGYCPQFDAINELLTGREHLELYALLRGVPEKEVCKVAEWAIRKLGLVKYSEKHAGNYSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFKCLGSVQHLKNRFGDGY 2063 HSP 3 Score: 65.855 bits (159), Expect = 7.748e-10 Identity = 31/78 (39.74%), Postives = 44/78 (56.41%), Query Frame = 1 Query: 25 NQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY 258 QL LLWKNF +RR+ L++E+ PL + FIL +VR S Y+ C F K M S G +P++ +C N C+ Sbjct: 5 TQLGLLLWKNFTYRRRQTLQLVVEVAWPLFIFFILISVRLSYPPYEQHECHFPNKAMPSAGTLPWVQGIICNANNPCF 82
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Xenopus
Match: klf9 (Kruppel-like factor 9 [Source:Xenbase;Acc:XB-GENE-483889]) HSP 1 Score: 841.262 bits (2172), Expect = 0.000e+0 Identity = 577/1727 (33.41%), Postives = 897/1727 (51.94%), Query Frame = 1 Query: 478 VMSENETTIESGYNELGEIICGSPE--------------NDFKLFMR-NFIKNQR----RKRSLLTCQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKIC---------------DAVNTLFNIT--------------NVKSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSF-----RNFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXX------------------XXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKL-----INKEKSYY--SYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKM--------GKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWS-PA---SILDIPMV--------SPECDCSKTGNQI----CNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSR-----------KLYGGFQF--VLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLK-FIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYN---SNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 V TT N L ++ CG PE N++K+F+ N K + K + C + QS N K ++ + PL+ GKV Y P+ +R+I++KAN TF+ L+ +R W L ++ ++V +N V+ K NP + D +N L+N N+ + D +LF+ + + C LD+F + D LT+ + F A ++F + F + T + + Y+IR+ + ++ T K K DR+W P PR + D +Y+ GF +LQ+ ID I+ T+ E + G + MPYPC++ D F+ L P +V+AW S+++L+K IV EKE RLKE MK MG+ N V W++ FI + V+ ++++V + + + S+ ++F + + I+ I Q F++SVFFSKAN+A+ G++YFT Y+ ++ + +++ + LS VAF +++ +E+ G+Q+ N+ ++P E + I +M++D+FIY + WY++ VFPG+YG+ KPW F +YW + FE EP + G+ I +LVK+Y + P ++ +N+ FYE QITAFLGHNGAGKTTT+SI+TG+F P+SGT ++ DI+T MDSIRQ +G+CPQ+N+LF LTVE+HI FY LK + + E +++D+ + K N + +LSGGM+RKLS+A+AF+G S+VV LDEPT+GVDP++RR IWDLL+KYRS RTIIL+THHMDEAD L DR+AI+SQGKL C GS +FLK FG G+YL+L++ N ++ + + + + ++ +A+++E + +LP D R + LF+ L++ + ++ + S+G+SDT LEEV + + N + N + + Y S++C K IN ++ D + S+ +KG LLQQQ AL IKR+ +A R K F A+++LP +L ++F I + + + PW+ + G E + TF S GL G RCM YQC N +N W+ PA S+ ++ + SP C CS + C + +GG P RI SS+ + +LT NISD+LLK +P L R + YGG LP ++ F+ ++ N + ++ L+ F+ L+ I ++W N+KG+ SM + N+ +N + + ++GI+ N P+ + + V +++ +AI VIF +SFIPASFV++L++ERVS +K QFVSG+ P +YW++NF WDI+ Y I + +++IIFIAFD ++Y S N A I LL FYG A+IP MYP S+ + PSTA+V L+ NL +G ++ TFILD+ E N LK N+ LK + LIFP F LGRG++DL N + +H N QW+ G +F++ + ++ + ++I+ +R + K + ED DV ER+R+ +D+L++ LTK Y GK + AV+ LC GVR GECFGLLGVNGAGKTTTF Sbjct: 304 VQDGGPTTFTQLINSLSDLFCGYPEGGGARVFSFNWYEDNNYKVFLGVNSTKKETYYLYDKTTTPFCNALIQSMESNPATKIA-WSAMKPLLMGKVLYSPDSPAVREILKKANSTFEQLERVRQMGKAWE-EVGPQLWNFFHSSVQMNLVRDTIK-----NPTVKEFLTRQLGDEGLTADDVINFLYNGNQDERPEGQVNYDWRNIFNITDHAIRLFN---QYMGCLTLDKF---EGHDDESHLTHHALYLLEENKFWAGLVFLDMFPW-TNTLPSHVKYKIRMDIDAVEKTKKIK--DRYWDPGPRADPVEDMRYIWGGFAYLQDMIDHGIIKSQTSTE-VPAGIYLQQMPYPCFVDDVFMITLNRCFPIFMVLAWIYSISMLVKDIVLEKELRLKETMKNMGVTNDVIWLTRFIDSFTVMTTSTILLTVVIVVGGVLHYSNPIILFCFLMAFTIATIMQAFLMSVFFSKANLAAACSGVIYFTLYLPHILCFAWQDRMTIKLKTLASFLSPVAFGFGTEYLSRYEEQGLGLQWGNIRKSPMEGDEYSFLFSIFMMLLDAFIYWTLAWYIDHVFPGEYGIPKPWYFPFLATYWC----------------------NPFFEPEPPGMVPGVYIQDLVKVYENTYKPAVDRMNITFYEGQITAFLGHNGAGKTTTLSIITGLFPPTSGTVWVRGRDIQTHMDSIRQSLGMCPQHNILFRHLTVEEHILFYAQLKGKSRKQAERQAEVMLEDMGIPHKRNDEAQNLSGGMQRKLSVALAFVGESKVVVLDEPTSGVDPYSRRSIWDLLLKYRS-GRTIILSTHHMDEADLLGDRIAIVSQGKLFCSGSPLFLKNCFGTGFYLTLVRRMRNIKDTGKKDSISALNGSVFNPMYTGDVSGLTELIHHHVPEAKLLESIGQELIYLLPSKDFKFRAYASLFRELEETLGDLGLSSFGISDTPLEEVVYHIPVNSGNNIGPCMYRNSQCTLYFDSHHCKAEKNPPNIN--------DREADGRGSR-------QIKGTELLQQQFNALIIKRFKHATRSHKDFFAQIVLPASFVLLALVFTLIVPPFGEYPSLTLHPWIYGQQFVFFSNEQPGNEQMATFSNAFLNSPGL---------------GTRCMKDQPLS-KKYQC--TNTSNEWTMPAVSPSVTNMLLSQEWTRDNPSPSCTCSSRSKLMMLPECPE-GAGGRPPPQRIQPSSEIIQDLTERNISDFLLKTYPDLIRSSMKSKYWVNEQRYGGISVGGKLPVLHVKGGDIVS---FFSQVGQMTNVTAGTTTKAISQELQTFLQNLETEDNI--------KVWFNNKGWHSMVIFINV-ANNAILRANLGADKDPEEFGITTMNHPLNLTKDQLSEVTVLTTSVDVVVAICVIFAMSFIPASFVLYLIQERVSNAKHLQFVSGVTPAIYWLTNFAWDIINYAISVAMVVIIFIAFDKKAYTSSSNLPALIALLFFYGWAVIPMMYPASYLFNVPSTAYVALSCINLFIGINSSAITFILDLFENNRSLLK-FNEKLKDLLLIFPHFCLGRGLIDLAMNQAVTDVYARFGEEHVSNPFQWEFLGRNIFAMAVEGVVYFTLNLLIQ----HRFFFSTWFSEPPK--GLVEGEDEDVAQERQRVIKGGGKNDILKLKELTKTY------------PGK--------QSPAVDRLCVGVRPGECFGLLGVNGAGKTTTF 1917 HSP 2 Score: 179.489 bits (454), Expect = 2.397e-44 Identity = 102/318 (32.08%), Postives = 174/318 (54.72%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 + + L K YP + P ++ L + + LG NGAGKTTT +LTG +SG A + I ++ + Q G CPQ++ + D LT +H+ YG L+ + ++EI+ V I+ + L + + L+ SGG KRKLS A+A IG VV LDEPT G+DP +RR +W+ ++ R ++LT+H M+E + L R+AI+ +G +C G++ LK KFG+G Y+ +K + + + + KF++ + E+ + ++ Q ++S +F+ L + ++I Y +S T+L++VF+ A Sbjct: 1873 LKLKELTKTYPGKQSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDIQVTSGDASVAGYSILQDIADVHQNTGYCPQFDAIDDLLTGREHLQLYGRLRGVPEDEIDMVADWGIEKLGLGKYADNLTGTYSGGNKRKLSTAIALIGCPPVVLLDEPTTGMDPQSRRFLWNSIVSIIKEGRAVVLTSHSMEECEVLCTRLAIMVKGTFKCLGTIQHLKYKFGDG-YIVTMKVRASKPGLAPDPGPVEKFIQTNFPGSVQREK---HYNML--QYQLSSSSLARVFQLLISNKDSLNIEEYSVSQTTLDQVFVNFA 2184 HSP 3 Score: 59.3066 bits (142), Expect = 8.363e-8 Identity = 28/79 (35.44%), Postives = 44/79 (55.70%), Query Frame = 1 Query: 22 SNQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY 258 S +++ LLWKN+ L++R+ + +EL PL + FIL +R++ Y C F K M S G +P+L C N C+ Sbjct: 4 SAKVKLLLWKNWTLRKRQKLRIFVELVWPLSLFFILVWLRNANPLYGQHECHFPNKAMPSAGLLPWLHGIFCNTNNPCF 82
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 841.262 bits (2172), Expect = 0.000e+0 Identity = 578/1720 (33.60%), Postives = 890/1720 (51.74%), Query Frame = 1 Query: 514 YNELGEIICGSPE--------------NDFK-LFMRNFIKNQRRKRSLLT--------CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEW---RLHFQTFL-----LDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIE-------------RGLNCTELDRFIPLDSLKD-IDK---LTNQSFRNFLAVIIFNETFQYLTPKNTTFL----SYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIP--LMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXX---------------------------XXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPM-------NKLINKEKSY-YSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSD----HLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWS----PASILDIPM--------VSPECDCSKTGNQ----ICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLN------SLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYF-------YNSNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESG--IVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 Y + I+CG PE N++K LF N + S + C + Q+ + + + ++ L PL+ GK+ Y P+ + ++ + N TF+ L R W R + F+ +D I + K F ++ + ++ + +SW E R + C LD+ P+ + + IDK L N+ R F A I+F + P+ T L Y+IR+ + ++ T K K D +W P PR + F D +Y+ GF +LQ+ ++QA I + T E G + MPYPCY+ D FL+ ++ +P + +AW SV V+IK IVYEKE+RLKE M++MGL+N + W+SWFIS+++ L++ ++ + L+ + S +VVF + + + I Q F++S FS+AN+A+ GGI+YFT Y+ +V+ + + + T+ LS VAF + E+ GVQ+ NL ++P E + + +M+ D+ +Y ++TWY+EAVFPGQYG+ +PW F +SYW + P + + +++ C E EP +L LG+SI NLVK+Y + K ++ L LNFYE QIT+FLGHNGAGKTTT+SILTG+F P++GTAYI+ +DIRTE++SIRQ +G+CPQ+NVLFD+LTVE+HI+FY LK + + ++++ + +++ DV L K + LSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP++RRGIW+LLIKYR RTIIL+THHMDEAD L DR+AIIS GKL C GS +FLK + G GYYL+L+K N+ S + I + ++ +AR++E+ + T VLP F ELF +D ++++ I SYG++DT+LEE+FLKVADD L + K Y + + + L+ +A T + +P+ +++ +L D + LK + L++QQ AL KR YAKR KGF A+++LP + +L ++F I K +++ PW M E F G L++ D G CM + + C E WS S++D+ + SP C+CS + IC G PP R +SD L NLTG NISDYL+K + ++ K +V +G S +SP + V + NH + L + +F+D K K + ++W N+KG+ ++ A+ N+ N + + YGI+ N P+ + + + +++ ++I VIF +SF+PASFV+FL++ERVS +K Q +SG+ P +YW++NF+WD++ + +N L +I P MYP SF PSTA+VVL + NL +G +++TF+L++ N L IN+ILK V LIFP F LGRG++D+ N + N V + + WD+ G LF++ + ++ + ++I+ I R + KL ED DV ER+R++ + +D+L + LTKIY + R+ AV+ LC G+ GECFGLLGVNGAGKTTTF Sbjct: 292 YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGGEGDNSTDEDSQVAYDNSTTPYCNDLMQNLESSPLYRM-IWRALKPLLVGKILYTPSTPATQMLMSEVNKTFQELSVFRDLGAMWEEVRPQIKNFMESSQEMDLIRTLLTNKGSKTFLDQQLNSTGWTTENISRFLAKETADVETEN-GPFYSWREALNETDRVVLTLSRFMECVNLDKLEPVATEEMLIDKSMELLNE--RKFWAGIVFMDM-----PEEETELPHHVKYKIRMDIDNVERTNKIK--DGYWDPGPRADPFEDMRYIWGGFSYLQDVVEQAIIRVQTGVEK-RTGIYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAALLVLILKTGNLLPYSDPSVVFVFLSVFAVVTISQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGYTLKIFASFLSPVAFGFGCEVFALLEEQGVGVQWDNLLESPLEENGYNITTSGFMMLFDTLLYGIMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEECKEYNQPHTVQKGSSEVC------MEEEPSHLPLGVSIQNLVKIYRNGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTTGTAYIMKKDIRTELNSIRQNLGVCPQHNVLFDALTVEEHIWFYARLKGLSEEKVKAEMEQMVNDVGLPHKKKYKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLIKYR-QGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKRDNDSSLSSCRNSSSTMSYLKKKFMTGFLLLCFAGLTDVSAISNLINKHVPEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGIADTTLEEIFLKVADDTGVDAETSDGTLPARRKRYAFGDHQSCLRPFTEDDAFDTNDS-DMDPESRETDYLSGIDGKGSYQLKSWNLMRQQFTALLWKRLLYAKRSRKGFFAQIVLPAVFVLIALVFSLIVPPFGKYPSLELEPW-----MYDEQYTFFSNDAPDDQGTQALLKALI--DKPGFGTACMEG--HSVMKVSC--SGEEEEWSTQFVSQSVMDLFLNGNWTMENPSPSCECSSDKRKKMLPICPPGAGGLPPFQRR-QNTSDILQNLTGRNISDYLVKTYSQIIEKSLKNKIWVNEFRYGGFSLGASNSPALPPNEEVV--ASINHIKKRLELPQNGAANRFLDSFGAFMKGLDTKDN-VKVWFNNKGWHAVGAFLNVM-NNAILRSKLREGEDPASYGITAFNHPLNLTKEQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMQCISGVKPVIYWLANFVWDMVSLSNIKNTKQPHRL----------QNKL----------WSITPLMYPASFIFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNN--KLSNINEILKSVLLIFPHFCLGRGLIDMVKNQAMADALERFGENRFV----SPMSWDLVGRNLFAMAVEGVVFFAITLMIQYRFFIKPRPVNAKLPPVV--------DEDEDVARERQRINEGGR-NDILELKGLTKIYRM--------------------KRKPAVDRLCVGIPPGECFGLLGVNGAGKTTTF 1920 HSP 2 Score: 177.948 bits (450), Expect = 6.803e-44 Identity = 106/324 (32.72%), Postives = 175/324 (54.01%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADA------RMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 + + L K+Y + P ++ L + + LG NGAGKTTT +LTG ++G A++ N I + + Q +G CPQ++ + + LT +H+ Y LL+ + + E+ V I+ + L + + + SGG KRKLS A+A IG VVFLDEPT G+DP ARR +W+ + R+++LT+H M+E + L R+AI+ G+ +C GS+ LK +FG+GY + + +N LK V+ + + A + S LQ+ + Q+ + +R F+ L KN + + I Y +S T+L++VF+ A Sbjct: 1876 LELKGLTKIYRMKRKPAVDRLCVGIPPGECFGLLGVNGAGKTTTFKMLTGDTDVTAGEAFLKNHSILRNIHEVHQNMGYCPQFDAINELLTGREHLELYALLRGVPEKEVCKVAEWAIRKLGLVKYSEKHAGNYSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFKCLGSVQHLKNRFGDGYTIIVRIAGSNPD---------LKPVEEFFSHAFPGSVLKEKHRSMLQYQLRSSQSSL-ARIFSILSKNKKR----LHIEDYSVSQTTLDQVFVNFA 2185
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Mouse
Match: Abca1 (ATP-binding cassette, sub-family A (ABC1), member 1 [Source:MGI Symbol;Acc:MGI:99607]) HSP 1 Score: 885.174 bits (2286), Expect = 0.000e+0 Identity = 595/1730 (34.39%), Postives = 930/1730 (53.76%), Query Frame = 1 Query: 514 YNELGEIICGSPEND-FKLFMRNFIKNQRRKRSLL--TCQLIFQSFFQNSIVKFE---------------MYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFK---ILDNLRLASVEWRLHFQTF------------LLDYISNNVF-------INDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSF-----RNFLAVIIFNETFQYLTPKNTTF---LSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDL-TEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXX------------------------------------XXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQ----------NPDQKQSKFLDQSD----HLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCM--NPSIYRLDNYQCFYRNENNMWS----PASILDI--------PMVSPECDCS----KTGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRK-----------LYGGFQFVLPSTFGW-SSKLIGDSPFWEELRDFVNASQANHNQSNLNSL-KFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYN----ALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 Y + I+CG PE K+ N+ ++ K + +F+ NS + ++ L PL+ GK+ Y P+ RQ++ + N TF+ + +L E TF LLD N+ F ++ + A+ + NP+ + N ++ + + ++ I R + C L++ P+ + +L N+S R F A I+F +TP + + Y+IR+ + ++ T K K D +W P PR + F D +YV GF +LQ+ ++QA I ++T +E + G + MPYPCY+ D FL+ ++ +P + +AW SV V+IKSIVYEKE+RLKE M++MGL+N + W SWF+S+++ L++ ++ V L+L + S +VVF + + + I Q F++S FS+AN+A+ GGI+YFT Y+ +V+ + + + ++ LLS VAF ++ +E+ GVQ+ NLF++P E F + + +M+ D+F+Y ++TWY+EAVFPGQYG+ +PW F C +SYW +S P + ++ E EP +L+LG+SI NLVK+Y ++ L LNFYE QIT+FLGHNGAGKTTT+SILTG+F P+SGTAYIL +DIR+EM SIRQ +G+CPQ+NVLFD LTVE+HI+FY LK + + +++ + ++ DV L K+ + + LSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP++RRGIW+LL+KYR RTIIL+THHMDEAD L DR+AIIS GKL C GS +FLK + G GYYL+L+K + + + I ++ ++++AR++E+ + T VLP F ELF +D ++++ I SYG+S+T+LEE+FLKVA++ ++ E S + + + F +P+ +++ L D + LKG+ L QQQ +AL KR A+R KGF A+++LP + + ++F I K +++ PW+ + TF + +L + D G G RCM NP + + C E+ W+ P SI+D+ SP C CS K +C G P R ++D L NLTG NISDYL+K + ++ K YGGF + ++ S + D+ ++++ + ++ + L+SL +F+ L + ++W N+KG+ ++ ++ N+ +N +LR+ L K YGI+ N P+ + + + +++ ++I VIF +SF+PASFV+FL++ERVS +K QF+SG+ P +YW+SNF+WD+ Y++P ++IIIFI F +SY+ S N LLL+ YG +I P MYP SF PSTA+VVL + NL +G +++TF+L++ N L +INDILK VFLIFP F LGRG++D+ N ++++ + N L WD+ G LF++ + ++++ ++I+ R K K L N ED DV ER+R+ +D+L + LTKIY + R+ AV+ +C G+ GECFGLLGVNGAGK+TTF Sbjct: 301 YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNNTEEDVDTFYDNSTTPYCNDLMKNLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELSPQIWTFMENSQEMDLVRTLLDSRGNDQFWEQKLDGLDWTAQDIMAFLAKNPEDVQSPNG--SVYTWREAFNETNQAIQTISRFMECVNLNKLEPIPTEV---RLINKSMELLDERKFWAGIVFTG----ITPDSVELPHHVKYKIRMDIDNVERTNKIK--DGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVLTGSEK-KTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKSIVYEKEARLKETMRIMGLDNGILWFSWFVSSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFVFLSVFAMVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSIKIFASLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTAVSMMLFDTFLYGVMTWYIEAVFPGQYGIPRPWYFPCTKSYWFGEEIDEKSHP----GSSQKGVSEICMEEEPTHLRLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRSEMSSIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVGLPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYR-QGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSCLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEE---SGVDAETSDGTLPARRNRRAFGDKQSCLHPFTEDDAVDPNDSDIDPESRETDLLSGMDGKGSYQLKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYNEQY------TFVSNDAPEDMGTQELLNALTKDPG-FGTRCMEGNP----IPDTPCLAGEED--WTISPVPQSIVDLFQNGNWTMKNPSPACQCSSDKIKKMLPVCPPGAGGL-PPPQRKQKTADILQNLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGVSNSQALPPSHEVNDA--IKQMKKLLKLTKDSSADRFLSSLGRFMAGLDTKNNV--------KVWFNNKGWHAISSFLNVINNAILRANLQKGE-NPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNN--KLNDINDILKSVFLIFPHFCLGRGLIDMVKNQAM-ADALERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVKAKLPPL------NDEDEDVRRERQRILDGGGQNDILEIKELTKIY--------------------RRKRKPAVDRICIGIPPGECFGLLGVNGAGKSTTF 1956 HSP 2 Score: 181.415 bits (459), Expect = 4.091e-45 Identity = 102/320 (31.87%), Postives = 169/320 (52.81%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 + I L K+Y + P ++ + + + LG NGAGK+TT +LTG + G A++ I + + + Q +G CPQ++ + + LT +H+ F+ LL+ + + E+ V I+ + L + + + SGG KRKLS AMA IG VVFLDEPT G+DP ARR +W+ + R+++LT+H M+E + L R+AI+ G+ +C GS+ LK +FG+GY + SN + + + +F + + + E+ R LP + +F L Q + I Y +S T+L++VF+ A D Sbjct: 1912 LEIKELTKIYRRKRKPAVDRICIGIPPGECFGLLGVNGAGKSTTFKMLTGDTPVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEKYASNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGY-----TIVVRIAGSNPDLKPVQEFFGLAFPGSVLKEKHRNMLQYQLPS---SLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKD 2223 HSP 3 Score: 65.855 bits (159), Expect = 5.861e-10 Identity = 31/77 (40.26%), Postives = 43/77 (55.84%), Query Frame = 1 Query: 28 QLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY 258 QLR LLWKN +RR+ LL+E+ PL + IL +VR S Y+ C F K M S G +P++ +C N C+ Sbjct: 6 QLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKAMPSAGTLPWVQGIICNANNPCF 82
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Mouse
Match: Abca4 (ATP-binding cassette, sub-family A (ABC1), member 4 [Source:MGI Symbol;Acc:MGI:109424]) HSP 1 Score: 800.045 bits (2065), Expect = 0.000e+0 Identity = 543/1727 (31.44%), Postives = 888/1727 (51.42%), Query Frame = 1 Query: 523 LGEIICGSPE--------------NDFKLFMRNFIKNQRR-------KRSLLTCQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLR--------LASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIE-------------RGLNCTELDRFIPLDSLKDIDKLTNQSFR-----NFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSS--------ESIPL---MRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXX--------------------------------XXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLI-------NKEKSYYSYYCNILKMKLRINA----TKTEIFLNQNPDQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWL--------MMSKMGKENLNTFYRKENISLGLINK-LESEYRSDLGESGIRCMNPSIYRLDNYQCFYRN--ENNMWSPASILDIPMVSPECDCSK----TGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSR-----------KLYGGFQF--VLPSTFGWSSKLIGDSPFWEELRDFVNASQAN-HNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNY-FYNSNSIVKHEY--NALQWDIAGEKLFSLFSLSIGWWIVLIIIESG-IVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 L +++CG PE N++K F+ I + R+ KR+ C + QS N + K + PL+ GK+ + P+ R+I++ AN TF+ LD +R + W ++ + I + + VK F +AV F+ + D ++ F W + + L C LD+F +S D +LT ++ F A ++F + + + + Y+IR+ + ++ T K K DR+W PR + DF+Y+ GF +LQ+ ++Q ++ E +G + MPYPC++ D F+ L P +V+AW SV++ +K IV EKE RLKE +K G++N V W +WF+ + ++ + + ++++ + +I S ++F + + + I Q+F++S FSKA++A+ G++YFT Y+ V+ + ++ + + LLS VAF ++++ +E+ G+Q+SN+ ++P E F + +M++D+ +Y L+ WY++ VFPG YG PW FL SYW+ S ++ PL M + +N FE E L G+ + NLVK++ + P ++ LN+ FYE+QITAFLGHNGAGKTTT+SILTG+ P+SGT I +DI T +D +RQ +G+CPQ+N+LF LTV +HI FY LK E + + +++D L K N + LSGGM+RKLS+A+AF+G+S+VV LDEPT+GVDP++RR IWDLL+KYRS RTII++THHMDEAD L DR+AIISQG+L C G+ +FLK FG G+YL+L++ + + + ++ V ++ +A+++E + +LP + R + LF+ L++ +A++ + S+G+SDT LEE+FLKV +D + +E++ + C+ KLR A T + ++ Q + D G L+ Q + AL +KR+H+ R K F+A+++LP + ++ I + + + PW+ M + E+L G N+ L+ E+ + C+N + ++ + + + W+ A SP C CS T C + +GG P R S++ L +LT NISDYL+K +P L R + YGG LP+ L+G F L +N S +++ L F+ +L+ T I ++W N+KG+ ++ ++ N+ N +LR+ L + +YGI+V + P+ + + V ++ +AI VIF +SF+PASFV++L++ERV+ +K QF+SG++P YW++NFLWDIM Y + +++ IFI F ++Y N A + LL+ YG A+IP MYP SF PSTA+V L+ NL +G ++ TF+L++ E N L+ N +L+K+ ++FP F LGRG++DL + + + EY N QWD+ G+ L ++ + ++++ ++I+ + R I + ED DV ER+R+ S D+L++ LTK+Y + + AV+ LC GVR GECFGLLGVNGAGKTTTF Sbjct: 319 LSDLLCGYPEGGGSRVFSFNWYEDNNYKAFLG--IDSTRKDPAYSYDKRTTSFCNSLIQSLESNPLTKI-AWRAAKPLLMGKILFTPDSPAARRIMKNANSTFEELDRVRKLVKAWEEVGPQIWYFFEKSTQMTVIRDTLQHPTVKDFINRQLGEEGITTEAVLNFFSNGPQEKQADDMTS-FDWRDIFNITDRFLRLANQYLECLVLDKF---ESYDDEVQLTQRALSLLEENRFWAGVVFPGMYPWAS-SLPPHVKYKIRMDIDVVEKTNKIK--DRYWDSGPRADPVEDFRYIWGGFAYLQDMVEQGIVKSQMQAEP-PIGVYLQQMPYPCFVDDSFMIILNRCFPIFMVLAWIYSVSMTVKGIVLEKELRLKETLKNQGVSNAVIWCTWFLDSFSIMALSIFLLTLFIMHGRILHYSDPFILFLFLLAFATATIMQSFLLSTLFSKASLAAACSGVIYFTLYLPHVLCFAWQDRMTADLKTTVSLLSSVAFGFGTEYLVRFEEQGLGLQWSNIGKSPLEGDEFSFLLSMKMMLLDAALYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPLTEEMEDPEHPEGMNDSFFERELPGLVPGVCVKNLVKVFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLIGGKDIETNLDVVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDSKVVVLDEPTSGVDPYSRRSIWDLLLKYRS-GRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVRKMKNIQSQRGGCEGVCSCTSKGFSTRCPTRVDEITEEQVLDGDVQELMDLVYHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLSSFGISDTPLEEIFLKVTEDAGAGSMFVGGAQQKREQAGLRHPCSAPTEKLRQYAQAPHTCSPGQVDPPKGQPSPEPEDPGVPFNTGARLILQHVQALLVKRFHHTIRSRKDFVAQIVLPATFVFLALMLSIIVPPFGEFPALTLHPWMYGHQYTFFSMDEPNNEHLEVLADVLLNRPGFGNRCLKEEWLPE-----YPCINATSWKTPSVSPNITHLFQKQKWTAAH------PSPSCKCSTREKLTMLPECPE-GAGGLPPPQRTQRSTEVLQDLTNRNISDYLVKTYPALIRSSLKSKFWVNEQRYGGISIGGKLPAIPISGEALVG---FLSGLGQMMNVSGGPVTREASKEMLDFLKHLETTDNI--------KVWFNNKGWHALVSFLNVAHNAILRASLPRDRDP-EEYGITVISQPLNLTKEQLSDITVLTTSVDAVVAICVIFAMSFVPASFVLYLIQERVTKAKHLQFISGVSPTTYWLTNFLWDIMNYAVSAGLVVGIFIGFQKKAYTSPDNLPALVSLLMLYGWAVIPMMYPASFLFEVPSTAYVALSCANLFIGINSSAITFVLELFENNRTLLR-FNAMLRKLLIVFPHFCLGRGLIDLALSQAVTDVYAQFGEEYSANPFQWDLIGKNLVAMAIEGVVYFLLTLLIQHHFFLTRWIAEPAREPVFD-------EDDDVAEERQRVMSGGNKTDILKLNELTKVY--------------------SGSSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTF 1981 HSP 2 Score: 180.259 bits (456), Expect = 1.170e-44 Identity = 116/401 (28.93%), Postives = 193/401 (48.13%), Query Frame = 1 Query: 1966 VGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADA-RMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 +G ++ M I+ +Y L+T ++ F +A+P AR P+ ++ E + N + ++ L K+Y + P ++ L + + LG NGAGKTTT +LTG + +SG A + + I T + + Q +G CPQ++ + D LT +H+Y Y L+ + EIE V I+ + L+ + L+ SGG KRKLS A+A G ++ LDEPT G+DP ARR +W+ ++ R ++LT+H M+E + L R+AI+ +G QC G++ LK KFG+GY +++ F + R S LQ+ + S +F+ L H + I Y ++ T+L++VF+ A Sbjct: 1874 IGKNLVAMAIEGVVYFLLTLLIQHHFFLTRWIAEP-----ARE------------PVFDEDDDVAEERQRVMSGG--NKTDILKLNELTKVYSGSSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTSISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPSKEIEKVANWGIQSLGLSLYADRLAGTYSGGNKRKLSTAIALTGCPPLLLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGTFQCLGTIQHLKYKFGDGYIVTMKIKSPKDDLLPDLNPVEQFFQGNFPGSVQRERHHSMLQF-------QVPSSSLARIFQLLISHKDSLLIEEYSVTQTTLDQVFVNFA 2248 HSP 3 Score: 57.7658 bits (138), Expect = 1.732e-7 Identity = 26/77 (33.77%), Postives = 42/77 (54.55%), Query Frame = 1 Query: 28 QLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY 258 Q++ LLWKN+ L++R+ ++EL PL + +L +R++ Y C F K M S G +P+L C N C+ Sbjct: 6 QIQLLLWKNWTLRKRQKIRFVVELVWPLSLFLVLIWLRNANPLYSQHECHFPNKAMPSAGLLPWLQGIFCNMNNPCF 82
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Mouse
Match: Abca12 (ATP-binding cassette, sub-family A (ABC1), member 12 [Source:MGI Symbol;Acc:MGI:2676312]) HSP 1 Score: 650.973 bits (1678), Expect = 0.000e+0 Identity = 500/1617 (30.92%), Postives = 815/1617 (50.40%), Query Frame = 1 Query: 670 MYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEW-----------RLHFQTF-LLDYISNNVFINDVKKFCKAYYSANP-KICDAVNTL-FNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSFRN--FLAVIIF-----NETFQYLTPKNTTF---LSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYW-----VYNIKSSESIPLMRNNNQNCEINHQA------------FESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLK--RMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXX--XXXXILKFVKIYIADARMMEESRLQWTIVLPQNDIN-SRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKL---RINATKTEIFLNQNPDQ---KQSKFLDQSDHL------LKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISL-GLINKLESEYRSDLGESGIR--CMNPSIYRLDNYQCFYRNENNMW-SPASILDIPMVSPECDCSKTGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTIS---TFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDL--------FFNYFYNSNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 ++ L P++ GK+ Y P + I+EK+N+T + L LR S EW L QT +L N F+ KF + K D ++ L + N ID ++ L S +C DR D++++++ + Q +++ +IF + P+ + + Y IR+ L +T + + W P P N+ + + FI+LQ++I++A IEL T S EV + +PYPC++ D FL ++ LP +L++AW + +K +VYEK+ RL EYMK+MG+N+ H+ +W I +I L++ + I+ V L+ I ++ ++F Y S I ++++SVFF+ N+A++ G ++Y + F+V + +E ELS + LLS AFS A +++ +E+ G+Q+ N++++P + G L++ DSFIY I WYV VFPG YG+A PW F SYW +K +S LM N N A E EP++L++G+++H + K+Y S + NLNLNFYE IT+ LG NGAGKTTTIS+LTG+F ++GT ++ +DI+T+++++R+ +G+C Q++VLF LT ++H+ YG +K K ++ + R +KD L + LSGGMKRKLSI++A IG SRVV LDEP+ GVDP +RR IWD++ K ++ RTIIL+THH+DEA+ LSDR+A + QG L+CCGS +LK FG+GY+L+L K ++ + ++N + + ++ ++ +A + E+ + VLP S + L + LD+ M +++I YG+SDT++EEVFL + D +KS ++ + K+ N T T PD S F D+ D + L+GF LL ++I+A+ IKR+H+ +R++KG +A++ILP++ + + + + ISP S G FY + S GL++ L GI C+N S + QC +++ W + +D V C CS Q C P +R SS + NLTG ++ +YL+ +K YGG+ F + KL D LR V A N + ++W + +GY S+PAY N +N LLR + S +GI + + P Q + + + ++++ +A+ ++ G S ASFV ++V E + +K+ Q +SGI YWV+NF++D++ Y++P+ I + F ++ N A LLL+ +G A MY + AF+ NL G + +S + L + N L+ I++ LK++FLIFPQF G G+++L F + V++ + D G +L S ++++ ++I ++ ++ K + +E + ED DV ER R+ S D++++ LTK Y + K + +AVNN+ G+ GECFGLLGVNGAGKTT F Sbjct: 794 IWAFLKPMLLGKILYSPYNPTTKAIMEKSNVTLRQLAELREKSQEWMDKSPIFMNSFHLLNQTIPMLQNTLRNPFVQVFVKFSVGLDAVELLKQIDDLDVLRLKLVNNIDIIDQLNTLSSLTVNISSCVLYDRIQASDTVEEMETVAEQLYKSNELFGSVIFKLPSNGSLHRGFDPEKVSLPPIVRYTIRMSLKTAQTTRSIRT--KIWAPGPH-NSPSHNQIYGRAFIYLQDSIERAIIELQTGRNSQEVAVQVQAVPYPCFMKDNFLTSVSYSLPIVLMVAWVVFIAAFVKKLVYEKDLRLHEYMKMMGVNSCSHFFAWLIESIGFLLVTIAILIVILKFGNILPKTNGFILFLYFSDYSFSVIAMSYLISVFFNNTNIAALIGSLIYVIAFFPFIVLVTVEDELSYVIKVFMSLLSPTAFSYASQYIARYEEQGVGLQWENMYKSPVQDDTTSFGWLCCLILADSFIYFFIAWYVRNVFPGTYGMAAPWYFPILPSYWKERFGCAEVKHEKSNGLMFTNIMMQNTNPSASKTSPDCAFPSNIEPEPKDLQVGVALHGVTKIYGSKT--AVENLNLNFYEGHITSLLGPNGAGKTTTISMLTGLFGATAGTIFVYGKDIKTDLNTVRKNMGVCMQHDVLFSYLTTKEHLLLYGSIKVPHWTKTQLHEEVKRTLKDTGLYSHRHKRVGTLSGGMKRKLSISIALIGGSRVVILDEPSTGVDPCSRRSIWDVISKNKTA-RTIILSTHHLDEAEVLSDRIAFLEQGGLRCCGSPFYLKEAFGDGYHLTLTKKKSPNLDTNAICDTVAVTAMIQSHLPEAYLKEDIGGELVYVLPPFSTKVSGAYLSLLRALDKGMGKLNIGCYGISDTTVEEVFLNLTKD-------SQKSSNMSLEHLTQRKVGNPSANGTST-------PDDLSVSSSNFTDRDDKVLTRSEKLEGFGLLLKKIMAILIKRFHHTRRNWKGLIAQVILPIVFVATAMGLGTLRDSSNSYPEIMISP----SIYGTSEQTAFYANFDPSTSGLVSAL-------WNFPGIDNVCLNTS-----DLQCLKKDDLGKWNTSGEAIDNFGV---CSCSD-NVQECPKFNYHPP---HRRTYSSQVIYNLTGKHMENYLITTANHFVQKRYGGWSFGM--------KLTND------LRFDVTAVPDNR-------------------------TLAKVWYDPEGYHSLPAYLNSLNNFLLRVNM--SEYDAARHGIIMYSHPYPGVQDQEQATISS--LIDILVALSILMGYSVTTASFVTYIVREHQTKAKQLQHISGIGVTCYWVTNFIYDMVFYLVPVAFSIGVIAIFKLPAFYSGNNLGAVSLLLLLFGYATFSWMYLLAGLFHETGMAFITYVCVNLFFGINSIVSLSVVYFLSKEKPNDPTLELISETLKRIFLIFPQFCFGYGLIELSQQQAVLDFLKAYG-----VEYPSETFEMDKLGAMFVALVSQGTMFFLLRLLINEWLIKKLRLFFRKFTSSPIMETVD-EDEDVRAERFRVESGAAEFDLVQLHRLTKTYQLIHK------------------KIIAVNNISLGIPAGECFGLLGVNGAGKTTIF 2300 HSP 2 Score: 184.111 bits (466), Expect = 8.122e-46 Identity = 110/353 (31.16%), Postives = 188/353 (53.26%), Query Frame = 1 Query: 2125 SIPLMRNNNQNCEINHQAFESEPENLKLG-ISIHNLVKLYP--SNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIR-TEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 S P+M +++ ++ + F E + + +H L K Y KI +NN++L + LG NGAGKTT +LTG PSSG I N+ +DS +G CPQ + L D +TVE+H+YFY + + + +I+ + ++++ + L + + S G KRKLS A+A IG ++ LDEP++G+DP ++R +W ++ + + ++ILT+H M+E + L R+AI+ G+ QC GSL +K +FG G+ + + N S L F K Y+ D + S L++ + + + +F L+ + ++I ++ +S T+LEEVF+ A D Sbjct: 2224 SSPIMETVDEDEDVRAERFRVESGAAEFDLVQLHRLTKTYQLIHKKIIAVNNISLGIPAGECFGLLGVNGAGKTTIFKMLTGDIIPSSGNILIRNKSGSLGHVDSHSSLVGYCPQEDALDDLVTVEEHLYFYARVHGIPEKDIKDTVHKLLRRLHLMAYKDRSTSMCSYGTKRKLSTALALIGKPSILLLDEPSSGMDPKSKRHLWRIISEEVQNKCSVILTSHSMEECEALCTRLAIMVNGRFQCIGSLQHIKSRFGRGFTVKVHLKNNKVSMETLTKFMQLHFPKTYLKDQHL---SMLEYHV-----PVTAGGVANIFDLLETNKTALNITNFLVSQTTLEEVFINFAKD 2568
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Mouse
Match: Abca13 (ATP-binding cassette, sub-family A (ABC1), member 13 [Source:MGI Symbol;Acc:MGI:2388707]) HSP 1 Score: 573.548 bits (1477), Expect = 5.904e-169 Identity = 462/1617 (28.57%), Postives = 796/1617 (49.23%), Query Frame = 1 Query: 619 CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFL-----LDYISNNVFINDVK-----KFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIERGL------------NCTELDRFIPLDSLKDIDKLTNQSFR--NFLAVIIFNETFQYLTPKNTTF-----LSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIF--LQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYW------VYNIKSSESIPLMRNNNQ--NCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKR--MDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXX-XXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNT-FYRKENISLGLINKLESEYRSD--LGESGIRCMNPSIYRLDNYQCFYRNENNMWSPASILDIPMVSPECDCSKTGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEV--NYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYNALQWDIAGEKLFSLFSLS-IGWWIVLIIIESGIVNRIIC---GKL-----KNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 C ++Q Q+ +++ L P++ GK+ Y PN I ++I+KAN TF +D +++ S +TFL N N ++ KF + + + I ++ L ++++Y + K+F+ +E G +C LDRF ++++ ++ ++ + +FLA IIFN + ++ ++ ++Y IR + + S + + W +P+ FKY +IF LQ+ I++A I + T ES+E + PYPC+ D FL + P ++++ W +V +++ +VYE+E +++EYM++MGL+ +H++SWF+ + L + ++V L++S I S ++F + + +S + ++ +SVFF++AN A++ + Y ++ +VV + L +LS + LLS AF V F+ + E EG+Q+ N+++ P E G +++ D+ +Y L WY + PG +G+ KPW F SYW + + S S L N N ++ Q E E G+++ ++ K Y +K+ V L L F+ QITA LG NGAGKTT IS+L G+F P+SGT I ++++T++ +R+++G+CPQ +VL D+LTV +H+ + +K E++ + + + +V+LT+ + + LSGGMKRKLSI +AF+G S+ V LDEP++GVDP +RR +WD+L+KYR RTII TTHH+DEA+ LSD VA++ QG+L+C LK +G+G L+L K + ++ + ++IYI A + + + T +P+ D + F L + LDQ++ + + YG+SDT+LEEVFL + D +KSY + + R + ++ + + + G LL Q +AL KR + R +K ++L+LPVL + + + L P++++P E T F+ N L + L ++R + R MN S + D Y P C C K N +S G P+ + + L NL+GY++ +YLL K P GWS G P +A N S +L ++W N KG+ S+P+Y N +NL+L L +AV + YGI++ + P + D + + I + +A+ ++ G S + AS +V +RV+G+KR Q +SG+ YW+ NFL+D++ Y++ + + + + AF ++ +N A LLL +G A+IP MY S S+ AF+ + N + G T + T + +L + + L++I ++LK F IFPQF LG+G+++L +N +K++ L + + S F ++ +GW V + ++ + + G L +S L+ I ++ +D DV E+ R+ + D++ + NL+K Y + AV+ + G+ GECFGLLGVNGAGK+TTF Sbjct: 3258 CLKLYQEILQSPNGAL-VWSFLKPVLHGKILYTPNSPEINEVIQKANYTFYFVDKIKVLS-------ETFLKISKLFQGSGNGQMFNQLQDALRNKFIRNFVESQLHI--DMDKL--TEDLQTYGRMLDKMFNHVEAGHFRFLGGMLANLSSCVVLDRFQAVETVDTLETKAHELMQQNSFLASIIFNSSLRHRHIRSAPHKLPPHVTYTIRTNV--LYSMRTDMIKNPSWKFHPQNLPAGGFKY---NYIFVPLQDMIERAIIVVQTGQESLEPTTQAQAAPYPCHTSDLFLNNVGFFFPLIMMLTWMVAVASMVRKLVYEREIQIEEYMRMMGLHPTIHFLSWFLENMATLALSSAALAVILKMSGIFMHSDAFIIFLYLLDFGVSAVMMSYFLSVFFNQANTAALCTSLGYMISFLPYVVLLVLHNQLSFAIQTLLCLLSTTAFGQGVFFITFLEGQEEGIQWGNMYRAP-EPGGMTFGWVCWMILFDAILYFLGGWYFSNLVPGTFGLGKPWYFPFTASYWKSICGLMERRRCSLSSGLFFFNEDFGNKGLSQQNGPGEMEGGNPGVALISVTKEYEDHKVAV-QELTLTFHRDQITALLGTNGAGKTTIISMLMGLFPPTSGTITINGKNLQTDLSKVREELGVCPQQDVLLDNLTVREHLMLFASIKAPWWTTKELQQQVNKTLDEVELTQHQHKPAGVLSGGMKRKLSIGIAFMGMSKTVVLDEPSSGVDPCSRRSLWDILLKYRE-GRTIIFTTHHLDEAEMLSDHVAVLQQGRLRCYAPPADLKETYGQGLTLTLSKQPSILETQEPKDVARVTSLIQIYIPQAFLKDSCGGELTYTIPK-DADRTCFKGLCQALDQNLQHLHLTGYGISDTTLEEVFLMLLQD------TNKKSYITPDNKVEPQNERPVGPLSPHNVSPLSTPPEGALPEP----IGGCQLLLGQAVALLRKRLLHTLRAWKSTTSDLLLPVLFVALAMGLFMVQPLAITYPPLKLTPG------HYETAETYFFSSGNHGPDLTHVLLRKFRDQDPVCADAFR-MNSSSWHRDPYSG-----------------PESQDSCGCLKCPN------KSAGAPSLTNCLGHT--LLNLSGYDVEEYLLVPSAK-------------PRLGGWS--FGGQIP--------NDAEDVKTNTSKPRTL-------------------AKVWYNQKGFHSLPSYLNHLNNLILWHHLPANAVDWRQYGITLYSHPYGGALLNE--DRILESIRQCGVALCIVLGFSILSASIGSSVVRDRVTGAKRLQHISGLGHRTYWLINFLYDMLFYLVSVCLCVAVIGAFQLTAFTFRENLAATALLLALFGYAMIPWMYLMSRIFSSSDVAFISYISLNFIFGLCTMLMTTMPRLLAIISKAQNLQKIYNVLKWAFTIFPQFCLGQGLIELCYNQ-------IKYD---LTHNFGIDSYVSPFEMNFLGWIFVELTLQGTFLLLLRLMLHGDLLRWPRDHSVLQDI-VKPAKDIDVETEQMRVLEGRTGGDMMVLCNLSKSYRSVF-----------------GGKTTAVHGISLGIPRGECFGLLGVNGAGKSTTF 4739 HSP 2 Score: 146.362 bits (368), Expect = 2.667e-34 Identity = 97/329 (29.48%), Postives = 164/329 (49.85%), Query Frame = 1 Query: 2224 NLVKLYPS---NKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILN-EDIRTEMDSIRQK---IGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARM-MEESRLQ--WTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMN 3180 NL K Y S K ++ ++L + LG NGAGK+TT IL G PSSG I + ++ S + IG CPQ + L + LT +H+ +Y L+ + K I V +++ + L ++ SGG +RKLS A+A +G ++ LDEP++G+DP ++R +W + + +LT+H M+E + L R+AI+ G +C G +K +FG+GY + + ++ S + L F I R+ + E +Q W + +LFK L+ + + ++I Y +S T+LE+VF+ A + + Sbjct: 4696 NLSKSYRSVFGGKTTAVHGISLGIPRGECFGLLGVNGAGKSTTFKILNGETPPSSGYTVIRTPQGDMVDLASAGKAGILIGYCPQQDALDELLTGWEHLQYYCRLRGIPKQYIPEVAADLVRRLHLESHVDKPVATYSGGTRRKLSTALALVGKPDILLLDEPSSGMDPCSKRYLWQTITQEVRDGCAAVLTSHSMEECEALCTRLAIMVDGSFRCLGPPQHIKNRFGDGYTVKVWLHKEGSQPSAVSDCLKLHFPGIQFKGQRLNLLEYHVQKSWECL-----------ADLFKVLENNKSLLNIEHYSISQTTLEQVFVNFATEQLQ 5013
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Mouse
Match: Abca7 (ATP-binding cassette, sub-family A (ABC1), member 7 [Source:MGI Symbol;Acc:MGI:1351646]) HSP 1 Score: 544.658 bits (1402), Expect = 3.927e-161 Identity = 344/1046 (32.89%), Postives = 538/1046 (51.43%), Query Frame = 1 Query: 19 ISNQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMG-------------------PIP-----FLTDFLCTFNTSCYDQTQINWLGTNLNEFHVFIGNITEIYNSLPSGALN---------------VPKFMKWITSNP------NEFIRLQNSFSYISKRIVPLISTVNKVMSENETTIESGYNEL-GEIICG-----SP---------ENDFKLFMRNFIKNQRRKRSLLTCQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWR-LHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIE-------------RGLNCTELDRFIPLDSLKDIDKLTNQSF-----RNFLAVIIFNETFQYLTPKNTT-------FLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYY 2898 + QL LLWKN+ +RR+ LL+EL PL + FIL AVR S + C F K + S G P P L++F + + T+ G ++ + +G + + ++ GA + K ++ + +P + + ++ +++ ++ L S + +G EL E +C SP N FM + SL F + V ++ L PLI GK+ + P+ R+++ + N TF+ L LR W L Q F ++++++ + +++ + + + +K ++D +SW E + + C LD+ L+++ + L +++ R A I+F L P + L ++IR+ + D T K+ D+FW P P + F D +YV GF++LQ+ ++QA + ++ S G + MP+PCY+ D FL+ L+ LP L +AW SV + +K++V EKE+RL+E M+ MGL+ V W+ WF+S + ++ ++ + L+L I S V+F + + ++ + Q+F++S FFS+AN+A+ GG+ YF Y+ +V+ + L L + LLS VAF + + E+ +G Q+ NL P E + F + +++D+ IY L WY+EAV PGQYG+ +PWNF RSYW S+ + Q+ ++ E P L G+SI L K + P + LNL+FYE ITAFLGHNGAGKTTT+SIL+G+F PSSG+A IL D++T M +IR +G+CPQYNVLFD LTVE+H++FYG LK + + R+I+DV LT K + + HLSGGM+RKLS+A+AF+G SRVV +DEPTAGVDP +RRGIW+LL+KYR RT+IL+THH+DEA+ L DRVA+++ G L CCGS +FL+R G GYY Sbjct: 3 LGTQLMLLLWKNYTYRRRQPIQLLVELLWPLFLFFILVAVRHSHPPLEHHECHFPNKPLPSAGTVPWLQGLVCNVNNSCFQHPTPGEKPGVLSNFKDSLISRLLADTRTVLGGHSIQDMLDALGKLIPVLRAVGGGARPQESDQPTSQGSVTKLLEKILQRASLDPVLGQAQDSMRKFSDAIRDLAQELLTLPSLMELRALLRRPRGSAGSLELVSEALCSTKGPSSPGGLSLNWYEANQLNEFMGPEVAPALPDNSLSPACSEFVGTLDDHPVSRLLWRRLKPLILGKILFAPDTNFTRKLMAQVNQTFEELALLRDLHELWGVLGPQIF--NFMNDSTNVAMLQRLLDVGGTGQRQQTPRAQK--KLEAIKDFLDPSRGGYSWREAHADMGRLAGILGQMMECVSLDK---LEAVPSEEALVSRALELLGERRLWAGIVFLSPEHPLDPSELSSPALSPGHLRFKIRMDID--DVTRTNKIRDKFWDPGPSADPFMDLRYVWGGFVYLQDLLEQAAVRVLGGGNS-RTGLYLQQMPHPCYVDDVFLRVLSRSLPLFLTLAWIYSVALTVKAVVREKETRLRETMRAMGLSRAVLWLGWFLSCLGPFLVSAALLVLVLKLGNILPYSHPVVIFLFLAAFAVATVAQSFLLSAFFSRANLAAACGGLAYFALYLPYVLCVAWRERLHLGGLLAASLLSPVAFGFGCESLALLEEQGDGAQWHNLGTGPAEDV-FSLAQVSAFLLLDAVIYGLALWYLEAVCPGQYGIPEPWNFPFRRSYWCGPGPPKSSV--LAPAPQDPKV---LVEEPPLGLVPGVSIRGLKKHFRGCPQPALQGLNLDFYEGHITAFLGHNGAGKTTTLSILSGLFPPSSGSASILGHDVQTNMAAIRPHLGICPQYNVLFDMLTVEEHVWFYGRLKGVSAAAMGPERERLIRDVGLTLKRDTQTRHLSGGMQRKLSVAIAFVGGSRVVIMDEPTAGVDPASRRGIWELLLKYR-EGRTLILSTHHLDEAELLGDRVAMVAGGSLCCCGSPLFLRRHLGCGYY 1031 HSP 2 Score: 293.508 bits (750), Expect = 1.936e-79 Identity = 249/824 (30.22%), Postives = 418/824 (50.73%), Query Frame = 1 Query: 2956 ILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLD--------NYQCFYRNE-----------NNMWSPASILDIPMVSPECDCSKTG-NQICNDLRSGGPPNSYRIMTSS--DKLNNLTGYNISDYLLKNFPKLSRK-----------LYGGFQFV-----LPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFT-RIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNS--NSIVKHEYNA-LQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 IL+ V+ ++ A+++E+ + +VLP F +F+ LDQ + + + YG+SDT+LEE+FLKV +D + + + C T E + +N + + L + ++G+ L QQ+ AL KR+ A+R +G A+++LP L + + F I + P+Q+SP + ++ +F+ ++ + G N+++ + LGE+G++ PS+ D + C++ + W+P S SP C CS+ G ++ D +G + + + NLTG N+SD+L+K +P L R+ YGGF LP+ L E+R ++ N LN+L T G+ + +IW N+KG+ +M A+ N +N LL + L V+ + I+ N P+ + + + +++ ++I V+F +SF+PASF + L+EER++ +K Q VSG+ +YW+ NFLWD+ Y++ + I++ IF+AF ++Y+ +N A +LLL+ YG +I P MYP SFF S PSTA+VVL NL +G ++++TF+L++L + + L+E++ ILK+VFLIFP F LGRG++D+ N + ++ + L+WDI G+ L ++ ++ G +LI + NR+ L S + + ED DV ERER++ DVL + +LTK+Y +G+ R AV+ LC G+ GECFGLLGVNGAGKT+TF Sbjct: 1096 ILELVQQHVPGAQLVEDLPHELLLVLPYAGALDGSFAMVFQELDQQLELLGLTGYGISDTNLEEIFLKVVEDAHREGGDSRPQLHLRTCTPQP------PTGPEASVLEN-GELAPQGLAPNAAQVQGWTLTCQQLRALLHKRFLLARRSRRGLFAQVVLPALFVGLALFFSLIVPPFGQYPPLQLSPAMYGPQV------SFFSED--APGDPNRMKL-LEALLGEAGLQ--EPSMQDKDARGSECTHSLACYFTVPEVPPDVASILASGNWTPES------PSPACQCSQPGARRLLPDCPAGAGGPPPPQAVAGLGEVVQNLTGRNVSDFLVKTYPSLVRRGLKTKKWVDEVRYGGFSLGGRDPDLPTGHEVVRTLA-------EIRALLSPQPGNALDRILNNL--------TQWALGLDARNSLKIWFNNKGWHAMVAFVNRANNGLLHALLPSGPVRHA-HSITTLNHPLNLTKEQLSEATLIASSVDVLVSICVVFAMSFVPASFTLVLIEERITRAKHLQLVSGLPQTLYWLGNFLWDMCNYLVAVCIVVFIFLAFQQRAYVAPENLPALLLLLLLYGWSITPLMYPASFFFSVPSTAYVVLTCINLFIGINSSMATFVLELL--SDQNLQEVSRILKQVFLIFPHFCLGRGLIDMVRNQAMADAFERLGDKQFQSPLRWDIIGKNLLAM--MAQGPLFLLITLLLQHRNRL----LPQSKPRLLPPLGEEDEDVAQERERVTKGATQGDVLVLRDLTKVY------------RGQ--------RNPAVDRLCLGIPPGECFGLLGVNGAGKTSTF 1851 HSP 3 Score: 177.948 bits (450), Expect = 5.651e-44 Identity = 102/320 (31.87%), Postives = 164/320 (51.25%), Query Frame = 1 Query: 2218 IHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMME--ESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 + +L K+Y + P ++ L L + LG NGAGKT+T ++TG PSSG A + ++ E + + +G CPQ + +FD LT +H+ + L+ + + ++ + + L + + SGG KRKL+ A+A +G+ VVFLDEPT G+DP ARR +W+ L+ R+++LT+H M+E + L R+AI+ G+ +C GS LK +FG G+ E + F++I A + E SRL++ + +R F EL H E + +S T+LEEVFL + D Sbjct: 1809 LRDLTKVYRGQRNPAVDRLCLGIPPGECFGLLGVNGAGKTSTFRMVTGDTLPSSGEAVLAGHNVAQERSAAHRSMGYCPQSDAIFDLLTGREHLELFARLRGVPEAQVAQTALSGLVRLGLPSYADRPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLSVVREGRSVVLTSHSMEECEALCTRLAIMVNGRFRCLGSSQHLKGRFGAGH-------TLTLRVPPDQPEPAIAFIRITFPGAELREVHGSRLRFQLPPGGRCTLTRVFRELAAQGRAHGVE----DFSVSQTTLEEVFLYFSKD 2117
BLAST of ATP binding cassette subfamily A member 1 vs. UniProt/SwissProt
Match: sp|P41233|ABCA1_MOUSE (Phospholipid-transporting ATPase ABCA1 OS=Mus musculus OX=10090 GN=Abca1 PE=1 SV=4) HSP 1 Score: 885.174 bits (2286), Expect = 0.000e+0 Identity = 595/1730 (34.39%), Postives = 930/1730 (53.76%), Query Frame = 1 Query: 514 YNELGEIICGSPEND-FKLFMRNFIKNQRRKRSLL--TCQLIFQSFFQNSIVKFE---------------MYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFK---ILDNLRLASVEWRLHFQTF------------LLDYISNNVF-------INDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSF-----RNFLAVIIFNETFQYLTPKNTTF---LSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDL-TEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXX------------------------------------XXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQ----------NPDQKQSKFLDQSD----HLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCM--NPSIYRLDNYQCFYRNENNMWS----PASILDI--------PMVSPECDCS----KTGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRK-----------LYGGFQFVLPSTFGW-SSKLIGDSPFWEELRDFVNASQANHNQSNLNSL-KFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYN----ALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 Y + I+CG PE K+ N+ ++ K + +F+ NS + ++ L PL+ GK+ Y P+ RQ++ + N TF+ + +L E TF LLD N+ F ++ + A+ + NP+ + N ++ + + ++ I R + C L++ P+ + +L N+S R F A I+F +TP + + Y+IR+ + ++ T K K D +W P PR + F D +YV GF +LQ+ ++QA I ++T +E + G + MPYPCY+ D FL+ ++ +P + +AW SV V+IKSIVYEKE+RLKE M++MGL+N + W SWF+S+++ L++ ++ V L+L + S +VVF + + + I Q F++S FS+AN+A+ GGI+YFT Y+ +V+ + + + ++ LLS VAF ++ +E+ GVQ+ NLF++P E F + + +M+ D+F+Y ++TWY+EAVFPGQYG+ +PW F C +SYW +S P + ++ E EP +L+LG+SI NLVK+Y ++ L LNFYE QIT+FLGHNGAGKTTT+SILTG+F P+SGTAYIL +DIR+EM SIRQ +G+CPQ+NVLFD LTVE+HI+FY LK + + +++ + ++ DV L K+ + + LSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP++RRGIW+LL+KYR RTIIL+THHMDEAD L DR+AIIS GKL C GS +FLK + G GYYL+L+K + + + I ++ ++++AR++E+ + T VLP F ELF +D ++++ I SYG+S+T+LEE+FLKVA++ ++ E S + + + F +P+ +++ L D + LKG+ L QQQ +AL KR A+R KGF A+++LP + + ++F I K +++ PW+ + TF + +L + D G G RCM NP + + C E+ W+ P SI+D+ SP C CS K +C G P R ++D L NLTG NISDYL+K + ++ K YGGF + ++ S + D+ ++++ + ++ + L+SL +F+ L + ++W N+KG+ ++ ++ N+ +N +LR+ L K YGI+ N P+ + + + +++ ++I VIF +SF+PASFV+FL++ERVS +K QF+SG+ P +YW+SNF+WD+ Y++P ++IIIFI F +SY+ S N LLL+ YG +I P MYP SF PSTA+VVL + NL +G +++TF+L++ N L +INDILK VFLIFP F LGRG++D+ N ++++ + N L WD+ G LF++ + ++++ ++I+ R K K L N ED DV ER+R+ +D+L + LTKIY + R+ AV+ +C G+ GECFGLLGVNGAGK+TTF Sbjct: 301 YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNNTEEDVDTFYDNSTTPYCNDLMKNLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELSPQIWTFMENSQEMDLVRTLLDSRGNDQFWEQKLDGLDWTAQDIMAFLAKNPEDVQSPNG--SVYTWREAFNETNQAIQTISRFMECVNLNKLEPIPTEV---RLINKSMELLDERKFWAGIVFTG----ITPDSVELPHHVKYKIRMDIDNVERTNKIK--DGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVLTGSEK-KTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKSIVYEKEARLKETMRIMGLDNGILWFSWFVSSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFVFLSVFAMVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSIKIFASLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTAVSMMLFDTFLYGVMTWYIEAVFPGQYGIPRPWYFPCTKSYWFGEEIDEKSHP----GSSQKGVSEICMEEEPTHLRLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRSEMSSIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVGLPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYR-QGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSCLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEE---SGVDAETSDGTLPARRNRRAFGDKQSCLHPFTEDDAVDPNDSDIDPESRETDLLSGMDGKGSYQLKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYNEQY------TFVSNDAPEDMGTQELLNALTKDPG-FGTRCMEGNP----IPDTPCLAGEED--WTISPVPQSIVDLFQNGNWTMKNPSPACQCSSDKIKKMLPVCPPGAGGL-PPPQRKQKTADILQNLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGVSNSQALPPSHEVNDA--IKQMKKLLKLTKDSSADRFLSSLGRFMAGLDTKNNV--------KVWFNNKGWHAISSFLNVINNAILRANLQKGE-NPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNN--KLNDINDILKSVFLIFPHFCLGRGLIDMVKNQAM-ADALERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVKAKLPPL------NDEDEDVRRERQRILDGGGQNDILEIKELTKIY--------------------RRKRKPAVDRICIGIPPGECFGLLGVNGAGKSTTF 1956 HSP 2 Score: 181.415 bits (459), Expect = 2.862e-44 Identity = 102/320 (31.87%), Postives = 169/320 (52.81%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 + I L K+Y + P ++ + + + LG NGAGK+TT +LTG + G A++ I + + + Q +G CPQ++ + + LT +H+ F+ LL+ + + E+ V I+ + L + + + SGG KRKLS AMA IG VVFLDEPT G+DP ARR +W+ + R+++LT+H M+E + L R+AI+ G+ +C GS+ LK +FG+GY + SN + + + +F + + + E+ R LP + +F L Q + I Y +S T+L++VF+ A D Sbjct: 1912 LEIKELTKIYRRKRKPAVDRICIGIPPGECFGLLGVNGAGKSTTFKMLTGDTPVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEKYASNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGY-----TIVVRIAGSNPDLKPVQEFFGLAFPGSVLKEKHRNMLQYQLPS---SLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKD 2223 HSP 3 Score: 65.855 bits (159), Expect = 4.099e-9 Identity = 31/77 (40.26%), Postives = 43/77 (55.84%), Query Frame = 1 Query: 28 QLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY 258 QLR LLWKN +RR+ LL+E+ PL + IL +VR S Y+ C F K M S G +P++ +C N C+ Sbjct: 6 QLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKAMPSAGTLPWVQGIICNANNPCF 82
BLAST of ATP binding cassette subfamily A member 1 vs. UniProt/SwissProt
Match: sp|O95477|ABCA1_HUMAN (Phospholipid-transporting ATPase ABCA1 OS=Homo sapiens OX=9606 GN=ABCA1 PE=1 SV=3) HSP 1 Score: 881.708 bits (2277), Expect = 0.000e+0 Identity = 598/1739 (34.39%), Postives = 931/1739 (53.54%), Query Frame = 1 Query: 514 YNELGEIICGSPEND-FKLFMRNFIKNQRRKRSLLT--CQLIFQSFFQNSIVKFE---------------MYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWR---------------LHFQTFLLDYISNNVF-------INDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPL--------DSLKDIDKLTNQSFRNFLAVIIFNETFQYLTPKNTTF---LSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDL-TEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXX------------------------------------XXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQ----------NPDQKQSKFLDQSD----HLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWL------MMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCM--NPSIYRLDNYQCFYRNENNMWS----PASILDI--------PMVSPECDCS----KTGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRK-----------LYGGFQFVLPSTFGW-SSKLIGDSPFWEELRDFVNASQANHNQSNLNSL-KFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYN----ALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 Y + I+CG PE K+ N+ ++ K + ++F+ NS + ++ L PL+ GK+ Y P+ RQ++ + N TF+ L W + LLD N+ F ++ + A+ + +P+ + N ++ + + ++ I R + C L++ P+ S++ +D+ R F A I+F +TP + + Y+IR+ + ++ T K K D +W P PR + F D +YV GF +LQ+ ++QA I ++T E + G M MPYPCY+ D FL+ ++ +P + +AW SV V+IK IVYEKE+RLKE M++MGL+N + W SWFIS+++ L++ ++ V L+L + S +VVF + + + I Q F++S FS+AN+A+ GGI+YFT Y+ +V+ + + + T+ LLS VAF ++ +E+ GVQ+ NLF++P E F + + +M+ D+F+Y ++TWY+EAVFPGQYG+ +PW F C +SYW +S P +NQ I+ E EP +LKLG+SI NLVK+Y ++ L LNFYE QIT+FLGHNGAGKTTT+SILTG+F P+SGTAYIL +DIR+EM +IRQ +G+CPQ+NVLFD LTVE+HI+FY LK + + +++ + ++ DV L + K+ + + LSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP++RRGIW+LL+KYR RTIIL+THHMDEAD L DR+AIIS GKL C GS +FLK + G GYYL+L+K + + + I ++ ++++AR++E+ + T VLP F ELF +D ++++ I SYG+S+T+LEE+FLKVA++ ++ E S + + + F +P+ +++ L D + +KG+ L QQQ +AL KR A+R KGF A+++LP + + ++F I K +++ PW+ +S E+ T L L+N L D G G RCM NP + + C E W+ P +I+D+ SP C CS K +C G P R ++D L +LTG NISDYL+K + ++ K YGGF + +T S+ + D+ ++++ + ++ + LNSL +F+ L + ++W N+KG+ ++ ++ N+ +N +LR+ L K YGI+ N P+ + + + +++ ++I VIF +SF+PASFV+FL++ERVS +K QF+SG+ P +YW+SNF+WD+ Y++P ++IIIFI F +SY+ S N LLL+ YG +I P MYP SF PSTA+VVL + NL +G +++TF+L++ N L INDILK VFLIFP F LGRG++D+ N ++++ + N L WD+ G LF++ + ++++ ++I+ R K S L N ED DV ER+R+ +D+L + LTKIY + R+ AV+ +C G+ GECFGLLGVNGAGK++TF Sbjct: 301 YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEEDAETFYDNSTTPYCNDLMKNLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELSPKIWTFMENSQEMDLVRMLLDSRDNDHFWEQQLDGLDWTAQDIVAFLAKHPEDVQSSNG--SVYTWREAFNETNQAIRTISRFMECVNLNKLEPIATEVWLINKSMELLDE------RKFWAGIVFTG----ITPGSIELPHHVKYKIRMDIDNVERTNKIK--DGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVLTGTEK-KTGVYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNSILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFVFLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFTLKIFASLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTSVSMMLFDTFLYGVMTWYIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHP---GSNQK-RISEICMEEEPTHLKLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYR-QGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEE---SGVDAETSDGTLPARRNRRAFGDKQSCLRPFTEDDAADPNDSDIDPESRETDLLSGMDGKGSYQVKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYNEQYTFVSNDAPEDTGT--------LELLNALT----KDPG-FGTRCMEGNP----IPDTPCQAGEEE--WTTAPVPQTIMDLFQNGNWTMQNPSPACQCSSDKIKKMLPVCPPGAGGL-PPPQRKQNTADILQDLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGVSNTQALPPSQEVNDA--IKQMKKHLKLAKDSSADRFLNSLGRFMTGLDTKNNV--------KVWFNNKGWHAISSFLNVINNAILRANLQKGE-NPSHYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTDN--KLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAM-ADALERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPL------NDEDEDVRRERQRILDGGGQNDILEIKELTKIY--------------------RRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTF 1956 HSP 2 Score: 179.874 bits (455), Expect = 8.727e-44 Identity = 101/320 (31.56%), Postives = 169/320 (52.81%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 + I L K+Y + P ++ + + + LG NGAGK++T +LTG + + G A++ I + + + Q +G CPQ++ + + LT +H+ F+ LL+ + + E+ V I+ + L + + + SGG KRKLS AMA IG VVFLDEPT G+DP ARR +W+ + R+++LT+H M+E + L R+AI+ G+ +C GS+ LK +FG+GY + SN + + + F + + + E+ R LP + +F L Q + I Y +S T+L++VF+ A D Sbjct: 1912 LEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGY-----TIVVRIAGSNPDLKPVQDFFGLAFPGSVLKEKHRNMLQYQLPS---SLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKD 2223 HSP 3 Score: 65.855 bits (159), Expect = 4.497e-9 Identity = 31/77 (40.26%), Postives = 43/77 (55.84%), Query Frame = 1 Query: 28 QLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY 258 QLR LLWKN +RR+ LL+E+ PL + IL +VR S Y+ C F K M S G +P++ +C N C+ Sbjct: 6 QLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKAMPSAGTLPWVQGIICNANNPCF 82
BLAST of ATP binding cassette subfamily A member 1 vs. UniProt/SwissProt
Match: sp|Q7TNJ2|ABCA7_RAT (ATP-binding cassette sub-family A member 7 OS=Rattus norvegicus OX=10116 GN=Abca7 PE=1 SV=1) HSP 1 Score: 821.617 bits (2121), Expect = 0.000e+0 Identity = 598/1937 (30.87%), Postives = 960/1937 (49.56%), Query Frame = 1 Query: 25 NQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSC---------------YDQTQINWL---------GTNLNEFHVFIGNITEIYNSLPSGAL----NVPKFMKWITS-----------------NPNEFIRLQNSFSYISKRIVPLISTVNKVMSENETTIESGYNEL-GEIICG-----SP---------ENDFKLFMRNFIKNQRRKRSLLTCQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCK----AYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIERG-------------LNCTELDRFIPLDSLKDIDKLTNQSF-----RNFLAVIIFNETFQYL------TPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFG---------------------------------------------EGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVAD---------DPMNK---LINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYR--------LDNYQCFYRNENNMWSPASIL-------DIPMVSPECDCSKTG-NQICNDLRSGGPPNSYRIMTSS--DKLNNLTGYNISDYLLKNFPKLSRK-----------LYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSL-KFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNS--NSIVKHEYNA-LQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 QL LLWKN+ +RR+ L++EL PL + FIL AVR S + C F K + S G +P+L +C N SC + + I+ L G + + +G + + ++ SGA N P +T + + ++ +++ ++ L S V +G EL E +C SP N FM + SL F + V ++ L PLI GK+ + P+ R+++ + N TF+ L LR W + + ++++++ + ++K + PK + ++ ++D ++W E L C LD+ L+++ + L +++ R A I+F L +P T +++I + D T K+ D+FW P P + D +YV GF++LQ+ ++QA + +++ +S G + MP+PCY+ D FL+ L+ LP L +AW SV + +K++V EKE+RL+E M+ MGL+ V W+ WF+S + ++ ++ + L+L I S VVF + + ++ + Q+F++S FFS+AN+A+ GG+ YF Y+ +V+ + L L + LLS VAF + + E+ +G Q+ NL P E + F + +++D+ IY L WY+EAV PGQYG+ +PWNF RSYW S+ + Q+ ++ E P L G+SI L K + + P + LNL+FYE ITAFLGHNGAGKTTT+SIL+G+F PSSG+A IL D++T M +IR +G+CPQYNVLFD LTVE+H++FYG LK + I+S +I+DV L K + + HLSGGM+RKLS+A+AF+G SRVV +DEPTAGVDP +RRGIW+LL+KYR RT+IL+THH+DEA+ L DRVA+++ G L CCGS +FL+R G +G + S + + IL+ V+ ++ A+++EE + + LP F +F+ LDQ + + + YG+SDT+LEE+FLKV + DP + L + + ++L+ N ++ L+ + + Q ++G+ L QQ+ AL KR+ A+R +G A+++LP L + + F I + P+Q+SP M ++ F + LE+ LGE+G++ +PS+ + C++ ASIL D P SP C CS+ G ++ D +G + + + NLTG N+SD+L+K +P L R+ YGGF + G D P E+ V +A + N+L + ++ L + + S +IW N+KG+ +M A+ N +N LLR+ L +V+ + I+ N P+ + + + +++ ++I V+F +SF+PASF + L+EER++ +K Q VSG+ +YW+ NFLWD+ Y++ + I+++IF+AF ++Y+ +N A +LLL+ YG +I P MYP SFF S PSTA+VVL NL +G ++++TF+L++L + + L+E++ ILK+VFLIFP F LGRG++D+ N + ++ + L+WDI G+ L ++ ++ G +LI + NR+ L + ED DV ERER++ DVL + +LTK+Y +G+ R AV++LC G+ GECFGLLGVNGAGKT+TF Sbjct: 5 TQLMLLLWKNYTYRRRQPIQLVVELLWPLFLFFILVAVRHSHPPLEHHECHFPNKPLPSAGTVPWLQGLVCNVNNSCFQHPTPGEKPGVLSNFKDSLISRLLADAHTVLGGHSTQDMLAALGKLIPVLRAVGSGAWPQESNQPAKQGSVTELLEKILQRASLETVLGQAQDSMRKFSDATRTVAQELLTLPSLVELRALLRRPRGSAGSLELISEALCSTKGPSSPGGLSLNWYEANQINEFMGPELAPTLPDSSLSPACSEFVGALDDHPVSRLLWRRLKPLILGKILFAPDTNFTRKLMAQVNQTFEELALLRDLHELWGV-LGPQIFNFMNDSTNVAMLQKLLDVEGTGWQQQTPK------GQKQLEAIRDFLDPSRGRYNWQEAHADMGRLAEILGQILECVSLDK---LEAVPSEEALVSRALELLGERRLWAGIVFLSPEHPLDSSEPPSPTTTGPGHLRVKIRMDIDDVTRTNKIRDKFWDPGPSADPLMDLRYVWGGFVYLQDLLEQAAVRVLSGRDS-RAGLYLQQMPHPCYVDDVFLRVLSRSLPLFLTLAWIYSVALTVKAVVREKETRLRETMRAMGLSRAVLWLGWFLSCLGPFLVSAALLVLVLKLGNILPYSHPVVVFLFLAAFAVATVAQSFLLSAFFSRANLAAACGGLAYFALYLPYVLCVAWRERLPLGGLLAVSLLSPVAFGFGCESLALLEEQGDGAQWHNLGTGPAEDV-FSLAQVSAFLLLDAVIYGLALWYLEAVCPGQYGIPEPWNFPFRRSYWCGPGPPKSSV--LAPAPQDPKV---LVEEPPPGLVPGVSIRGLKKHFRGSPQPALRGLNLDFYEGHITAFLGHNGAGKTTTLSILSGLFPPSSGSASILGHDVQTNMAAIRPHLGICPQYNVLFDMLTVEEHVWFYGRLKGVSAAAIDSEQEHLIRDVGLIPKRDTQTRHLSGGMQRKLSVAIAFVGGSRVVIMDEPTAGVDPASRRGIWELLLKYR-EGRTLILSTHHLDEAELLGDRVAMVASGSLCCCGSPLFLRRHLGCGYYLTLVKSSQSLVTHDLKGDTEDPRREKKSGSEGKTADTVLTRDGPHRSSQVPAPDAVPVTPSAALILELVQRHVPGAQLVEELPHELVLALPYAGALDGSFATVFQELDQQLERLGLTGYGISDTNLEEIFLKVVEEAHAHGEGGDPRQQQHLLTATPQPHTGPEASVLE-----NGELAKLVLDPQAPKGSAPTTAQ----VQGWTLTCQQLRALLHKRFLLARRSRRGLFAQIVLPALFVGLALFFTLIVPPFGQYPPLQLSP-----AMYGPQVSFFSEDAPADPNRMKLLEAL----LGEAGLQ--DPSVQGKGSRGSECTHSLACYFTVPEVPPDVASILASGNWTPDSP--SPACQCSQPGARRLLPDCPAGAGGPPPPQAMAGFGEVVQNLTGRNVSDFLVKTYPSLVRRGLKTKKWVDEVRYGGF------SLGGRDP---DLPSGREVVRTVAEMRALLSPQPGNTLDRILNNLTQWALGLDARNSL-KIWFNNKGWHAMVAFVNRANNGLLRAFLPSGSVRHA-HSITTLNHPLNLTKEQLSEATLIASSVDVLVSICVVFAMSFVPASFTLVLIEERITRAKHLQLVSGLPQTLYWLGNFLWDMCNYLVAVCIVVLIFLAFQQKAYVAPENLPALLLLLLLYGWSITPLMYPASFFFSVPSTAYVVLTCINLFIGINSSMATFVLELL--SDQNLQEVSRILKQVFLIFPHFCLGRGLIDMVRNQAMADAFERLGDKQFQSPLRWDIIGKNLLAM--VAQGPLFLLITLLLQHRNRL----LPQPKSRLPPPLGEEDEDVVRERERVTKGATQGDVLVLRDLTKVY------------RGQ--------RSPAVDHLCLGIPPGECFGLLGVNGAGKTSTF 1862 HSP 2 Score: 178.718 bits (452), Expect = 2.309e-43 Identity = 102/320 (31.87%), Postives = 164/320 (51.25%), Query Frame = 1 Query: 2218 IHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMME--ESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 + +L K+Y + P +++L L + LG NGAGKT+T ++TG PSSG A + ++ E + + +G CPQ + +FD LT +H+ + L+ + + ++ + + L + + SGG KRKL+ A+A +G+ VVFLDEPT G+DP ARR +W+ L+ R+++LT+H M+E + L R+AI+ G+ +C GS LK +FG G+ E + F+ DA + E SRL++ + +R F EL H E + +S T+LEEVFL + D Sbjct: 1820 LRDLTKVYRGQRSPAVDHLCLGIPPGECFGLLGVNGAGKTSTFRMVTGDTLPSSGEAVLAGHNVAQEPSAAHRSMGYCPQSDAIFDLLTGREHLELFARLRGVPEAQVAQTALSGLVRLGLPSYADRPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNNLLSVVREGRSVVLTSHSMEECEALCTRLAIMVNGRFRCLGSAQHLKSRFGAGH-------TLTLRVPPDQPEPAIAFIVTTFPDAELREVHGSRLRFQLPPGGGCTLARVFRELAAQGKAHGVE----DFSVSQTTLEEVFLYFSKD 2128
BLAST of ATP binding cassette subfamily A member 1 vs. UniProt/SwissProt
Match: sp|O35600|ABCA4_MOUSE (Retinal-specific phospholipid-transporting ATPase ABCA4 OS=Mus musculus OX=10090 GN=Abca4 PE=2 SV=1) HSP 1 Score: 800.045 bits (2065), Expect = 0.000e+0 Identity = 543/1727 (31.44%), Postives = 888/1727 (51.42%), Query Frame = 1 Query: 523 LGEIICGSPE--------------NDFKLFMRNFIKNQRR-------KRSLLTCQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLR--------LASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIE-------------RGLNCTELDRFIPLDSLKDIDKLTNQSFR-----NFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSS--------ESIPL---MRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXX--------------------------------XXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLI-------NKEKSYYSYYCNILKMKLRINA----TKTEIFLNQNPDQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWL--------MMSKMGKENLNTFYRKENISLGLINK-LESEYRSDLGESGIRCMNPSIYRLDNYQCFYRN--ENNMWSPASILDIPMVSPECDCSK----TGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSR-----------KLYGGFQF--VLPSTFGWSSKLIGDSPFWEELRDFVNASQAN-HNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNY-FYNSNSIVKHEY--NALQWDIAGEKLFSLFSLSIGWWIVLIIIESG-IVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 L +++CG PE N++K F+ I + R+ KR+ C + QS N + K + PL+ GK+ + P+ R+I++ AN TF+ LD +R + W ++ + I + + VK F +AV F+ + D ++ F W + + L C LD+F +S D +LT ++ F A ++F + + + + Y+IR+ + ++ T K K DR+W PR + DF+Y+ GF +LQ+ ++Q ++ E +G + MPYPC++ D F+ L P +V+AW SV++ +K IV EKE RLKE +K G++N V W +WF+ + ++ + + ++++ + +I S ++F + + + I Q+F++S FSKA++A+ G++YFT Y+ V+ + ++ + + LLS VAF ++++ +E+ G+Q+SN+ ++P E F + +M++D+ +Y L+ WY++ VFPG YG PW FL SYW+ S ++ PL M + +N FE E L G+ + NLVK++ + P ++ LN+ FYE+QITAFLGHNGAGKTTT+SILTG+ P+SGT I +DI T +D +RQ +G+CPQ+N+LF LTV +HI FY LK E + + +++D L K N + LSGGM+RKLS+A+AF+G+S+VV LDEPT+GVDP++RR IWDLL+KYRS RTII++THHMDEAD L DR+AIISQG+L C G+ +FLK FG G+YL+L++ + + + ++ V ++ +A+++E + +LP + R + LF+ L++ +A++ + S+G+SDT LEE+FLKV +D + +E++ + C+ KLR A T + ++ Q + D G L+ Q + AL +KR+H+ R K F+A+++LP + ++ I + + + PW+ M + E+L G N+ L+ E+ + C+N + ++ + + + W+ A SP C CS T C + +GG P R S++ L +LT NISDYL+K +P L R + YGG LP+ L+G F L +N S +++ L F+ +L+ T I ++W N+KG+ ++ ++ N+ N +LR+ L + +YGI+V + P+ + + V ++ +AI VIF +SF+PASFV++L++ERV+ +K QF+SG++P YW++NFLWDIM Y + +++ IFI F ++Y N A + LL+ YG A+IP MYP SF PSTA+V L+ NL +G ++ TF+L++ E N L+ N +L+K+ ++FP F LGRG++DL + + + EY N QWD+ G+ L ++ + ++++ ++I+ + R I + ED DV ER+R+ S D+L++ LTK+Y + + AV+ LC GVR GECFGLLGVNGAGKTTTF Sbjct: 319 LSDLLCGYPEGGGSRVFSFNWYEDNNYKAFLG--IDSTRKDPAYSYDKRTTSFCNSLIQSLESNPLTKI-AWRAAKPLLMGKILFTPDSPAARRIMKNANSTFEELDRVRKLVKAWEEVGPQIWYFFEKSTQMTVIRDTLQHPTVKDFINRQLGEEGITTEAVLNFFSNGPQEKQADDMTS-FDWRDIFNITDRFLRLANQYLECLVLDKF---ESYDDEVQLTQRALSLLEENRFWAGVVFPGMYPWAS-SLPPHVKYKIRMDIDVVEKTNKIK--DRYWDSGPRADPVEDFRYIWGGFAYLQDMVEQGIVKSQMQAEP-PIGVYLQQMPYPCFVDDSFMIILNRCFPIFMVLAWIYSVSMTVKGIVLEKELRLKETLKNQGVSNAVIWCTWFLDSFSIMALSIFLLTLFIMHGRILHYSDPFILFLFLLAFATATIMQSFLLSTLFSKASLAAACSGVIYFTLYLPHVLCFAWQDRMTADLKTTVSLLSSVAFGFGTEYLVRFEEQGLGLQWSNIGKSPLEGDEFSFLLSMKMMLLDAALYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPLTEEMEDPEHPEGMNDSFFERELPGLVPGVCVKNLVKVFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLIGGKDIETNLDVVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDSKVVVLDEPTSGVDPYSRRSIWDLLLKYRS-GRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVRKMKNIQSQRGGCEGVCSCTSKGFSTRCPTRVDEITEEQVLDGDVQELMDLVYHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLSSFGISDTPLEEIFLKVTEDAGAGSMFVGGAQQKREQAGLRHPCSAPTEKLRQYAQAPHTCSPGQVDPPKGQPSPEPEDPGVPFNTGARLILQHVQALLVKRFHHTIRSRKDFVAQIVLPATFVFLALMLSIIVPPFGEFPALTLHPWMYGHQYTFFSMDEPNNEHLEVLADVLLNRPGFGNRCLKEEWLPE-----YPCINATSWKTPSVSPNITHLFQKQKWTAAH------PSPSCKCSTREKLTMLPECPE-GAGGLPPPQRTQRSTEVLQDLTNRNISDYLVKTYPALIRSSLKSKFWVNEQRYGGISIGGKLPAIPISGEALVG---FLSGLGQMMNVSGGPVTREASKEMLDFLKHLETTDNI--------KVWFNNKGWHALVSFLNVAHNAILRASLPRDRDP-EEYGITVISQPLNLTKEQLSDITVLTTSVDAVVAICVIFAMSFVPASFVLYLIQERVTKAKHLQFISGVSPTTYWLTNFLWDIMNYAVSAGLVVGIFIGFQKKAYTSPDNLPALVSLLMLYGWAVIPMMYPASFLFEVPSTAYVALSCANLFIGINSSAITFVLELFENNRTLLR-FNAMLRKLLIVFPHFCLGRGLIDLALSQAVTDVYAQFGEEYSANPFQWDLIGKNLVAMAIEGVVYFLLTLLIQHHFFLTRWIAEPAREPVFD-------EDDDVAEERQRVMSGGNKTDILKLNELTKVY--------------------SGSSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTF 1981 HSP 2 Score: 180.259 bits (456), Expect = 8.185e-44 Identity = 116/401 (28.93%), Postives = 193/401 (48.13%), Query Frame = 1 Query: 1966 VGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADA-RMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 +G ++ M I+ +Y L+T ++ F +A+P AR P+ ++ E + N + ++ L K+Y + P ++ L + + LG NGAGKTTT +LTG + +SG A + + I T + + Q +G CPQ++ + D LT +H+Y Y L+ + EIE V I+ + L+ + L+ SGG KRKLS A+A G ++ LDEPT G+DP ARR +W+ ++ R ++LT+H M+E + L R+AI+ +G QC G++ LK KFG+GY +++ F + R S LQ+ + S +F+ L H + I Y ++ T+L++VF+ A Sbjct: 1874 IGKNLVAMAIEGVVYFLLTLLIQHHFFLTRWIAEP-----ARE------------PVFDEDDDVAEERQRVMSGG--NKTDILKLNELTKVYSGSSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTSISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPSKEIEKVANWGIQSLGLSLYADRLAGTYSGGNKRKLSTAIALTGCPPLLLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGTFQCLGTIQHLKYKFGDGYIVTMKIKSPKDDLLPDLNPVEQFFQGNFPGSVQRERHHSMLQF-------QVPSSSLARIFQLLISHKDSLLIEEYSVTQTTLDQVFVNFA 2248 HSP 3 Score: 57.7658 bits (138), Expect = 1.212e-6 Identity = 26/77 (33.77%), Postives = 42/77 (54.55%), Query Frame = 1 Query: 28 QLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY 258 Q++ LLWKN+ L++R+ ++EL PL + +L +R++ Y C F K M S G +P+L C N C+ Sbjct: 6 QIQLLLWKNWTLRKRQKIRFVVELVWPLSLFLVLIWLRNANPLYSQHECHFPNKAMPSAGLLPWLQGIFCNMNNPCF 82
BLAST of ATP binding cassette subfamily A member 1 vs. UniProt/SwissProt
Match: sp|Q8IZY2|ABCA7_HUMAN (Phospholipid-transporting ATPase ABCA7 OS=Homo sapiens OX=9606 GN=ABCA7 PE=1 SV=3) HSP 1 Score: 799.275 bits (2063), Expect = 0.000e+0 Identity = 536/1634 (32.80%), Postives = 855/1634 (52.33%), Query Frame = 1 Query: 670 MYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRL---HFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSW-------------IERGLNCTELDRFIPLDSLKDIDKLTNQSFR-----NFLAVIIF------NETFQYLTPK-NTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXX------------------------XXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCN---ILKMKLRINATKTEIFLNQNPDQKQSKFLDQSD-----HLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIR--CMNPSIYRLDNYQCFYRNENNM----WSPASILDIPMVSPECDCSKTG-NQICNDLRSGGPPNSY--RIMTSSDKLNNLTGYNISDYLLKNFPKLSRK-----------LYGGFQFVLPSTFGWSSKLIGDS--PFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNS--NSIVKHEYNA-LQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRN-----TEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 ++ L PLI GK+ + P+ R+++ + N TF+ L LR W + TF+ D + + ++ + P D + L +S++D S +SW + R C LD+ L++ L +++ + F A ++F ++ ++ TP + +IR+ + + T K + DRFW P P + TD +YV GF++LQ+ +++A + V + + G + MPYPCY+ D FL+ L+ LP L +AW SVT+ +K++V EKE+RL++ M+ MGL+ V W+ WF+S + ++ ++ + L+L I S VVF + + ++ + Q+F++S FFS+AN+A+ GG+ YF+ Y+ +V+ + L + LLS VAF + + E+ EG Q+ N+ P + F + L+++D+ +Y L TWY+EAV PGQYG+ +PWNF RSYW P + + E P L G+S+ +L K +P + P + L+L+FY+ ITAFLGHNGAGKTTT+SIL+G+F PS G+A+IL D+R+ M +IR +G+CPQYNVLFD LTV++H++FYG LK + + R+++DV L K + + HLSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP +RRGIW+LL+KYR RT+IL+THH+DEA+ L DRVA+++ G+L CCGS +FL+R G GYYL+L+K + + S +L V+ ++ AR++EE + +VLP + F LF+ LD +AE+ + YG+SDTSLEE+FLKV ++ ++ S + C L + LR+ E L + DQ ++G+ L +QQ+ AL +KR+ A+R +G A+++LP L + ++F I +++SP M ++ F G LE+ L E+G+ + S +R + + W+P S SP C CS+ G ++ D + + S + + NLTG N+SD+L+K +P+L R+ YGGF S + +G S W L + + NL + Q + K IW N+KG+ SM A+ N SN +LR+ L + + I+ N P+ + + + +++ ++I V+F +SF+PASF + L+EERV+ +K Q + G++P +YW+ NFLWD+ Y++P I+++IF+AF ++Y+ N A +LLL+ YG +I P MYP SFF S PSTA+VVL NL +G +++TF+L++ + + L+E++ ILK+VFLIFP F LGRG++D+ N + ++ + L+W++ G+ L + ++I + + + ++ L + +R+ ED DV ERER+ DVL + NLTK+Y +G+ R AV+ LC G+ GECFGLLGVNGAGKT+TF Sbjct: 283 LWRRLKPLILGKLLFAPDTPFTRKLMAQVNRTFEELTLLRDVREVWEMLGPRIFTFMNDSSNVAMLQRLLQMQDEGRRQPRPGGRDHMEAL------RSFLDPGSGGYSWQDAHADVGHLVGTLGRVTECLSLDK---LEAAPSEAALVSRALQLLAEHRFWAGVVFLGPEDSSDPTEHPTPDLGPGHVRIKIRMDIDVVTRTNKIR--DRFWDPGPAADPLTDLRYVWGGFVYLQDLVERAAVR-VLSGANPRAGLYLQQMPYPCYVDDVFLRVLSRSLPLFLTLAWIYSVTLTVKAVVREKETRLRDTMRAMGLSRAVLWLGWFLSCLGPFLLSAALLVLVLKLGDILPYSHPGVVFLFLAAFAVATVTQSFLLSAFFSRANLAAACGGLAYFSLYLPYVLCVAWRDRLPAGGRVAASLLSPVAFGFGCESLALLEEQGEGAQWHNVGTRPTADV-FSLAQVSGLLLLDAALYGLATWYLEAVCPGQYGIPEPWNFPFRRSYWCGPRPPKSPAPCPTPLDPKVLV-----EEAPPGLSPGVSVRSLEKRFPGSPQPALRGLSLDFYQGHITAFLGHNGAGKTTTLSILSGLFPPSGGSAFILGHDVRSSMAAIRPHLGVCPQYNVLFDMLTVDEHVWFYGRLKGLSAAVVGPEQDRLLQDVGLVSKQSVQTRHLSGGMQRKLSVAIAFVGGSQVVILDEPTAGVDPASRRGIWELLLKYR-EGRTLILSTHHLDEAELLGDRVAVVAGGRLCCCGSPLFLRRHLGSGYYLTLVKARLPLTTNEKADTDMEGSVDTRQEKKNGSQGSRVGTPQLLALVQHWVPGARLVEELPHELVLVLPYTGAHDGSFATLFRELDTRLAELRLTGYGISDTSLEEIFLKVVEECAADTDMEDGSCGQHLCTGIAGLDVTLRLKMPPQETALENGEPAGSAPETDQGSGPDAVGRVQGWALTRQQLQALLLKRFLLARRSRRGLFAQIVLPALFVGLALVFSLIVPPFGHYPALRLSP-----TMYGAQVSFFSEDAPGDPGRARLLEAL----LQEAGLEEPPVQHSSHRFSAPEVPAEVAKVLASGNWTPES------PSPACQCSRPGARRLLPDCPAAAGGPPPPQAVTGSGEVVQNLTGRNLSDFLVKTYPRLVRQGLKTKKWVNEVRYGGFSLGGRDPGLPSGQELGRSVEELWALLSPLPGGA-LDRVLKNLTAWAHSLDAQDSLK----------IWFNNKGWHSMVAFVNRASNAILRAHLPPGPARHA-HSITTLNHPLNLTKEQLSEGALMASSVDVLVSICVVFAMSFVPASFTLVLIEERVTRAKHLQLMGGLSPTLYWLGNFLWDMCNYLVPACIVVLIFLAFQQRAYVAPANLPALLLLLLLYGWSITPLMYPASFFFSVPSTAYVVLTCINLFIGINGSMATFVLELF--SDQKLQEVSRILKQVFLIFPHFCLGRGLIDMVRNQAMADAFERLGDRQFQSPLRWEVVGKNL-----------LAMVIQGPLFLLFTLLLQHRSQLLPQPRVRSLPLLGEEDEDVARERERVVQGATQGDVLVLRNLTKVY------------RGQ--------RMPAVDRLCLGIPPGECFGLLGVNGAGKTSTF 1837 HSP 2 Score: 169.088 bits (427), Expect = 1.941e-40 Identity = 98/318 (30.82%), Postives = 157/318 (49.37%), Query Frame = 1 Query: 2218 IHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 + NL K+Y ++P ++ L L + LG NGAGKT+T ++TG S G A + + E + +G CPQ + +F+ LT +H+ L+ + + ++ + + L+ + + SGG KRKL+ A+A +G+ VVFLDEPT G+DP ARR +W+ L+ R+++LT+H M+E + L R+AI+ G+ +C GS LK +F G+ L+L + FV A + E + LP + +F L H AE + + +S T LEEVFL + D Sbjct: 1795 LRNLTKVYRGQRMPAVDRLCLGIPPGECFGLLGVNGAGKTSTFRMVTGDTLASRGEAVLAGHSVAREPSAAHLSMGYCPQSDAIFELLTGREHLELLARLRGVPEAQVAQTAGSGLARLGLSWYADRPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLAVVREGRSVMLTSHSMEECEALCSRLAIMVNGRFRCLGSPQHLKGRFAAGHTLTLRVPAARSQPAA-------AFVAAEFPGAELREAHGGRLRFQLPPGGRCA--LARVFGELAVHGAEHGVEDFSVSQTMLEEVFLYFSKD 2103 HSP 3 Score: 70.8626 bits (172), Expect = 1.516e-10 Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 25 NQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQ 264 QL LLWKNF +RR+ LL+EL PL + FIL AVR S + C F K + S G +P+L +C N +C+ Q Sbjct: 5 TQLMLLLWKNFMYRRRQPVQLLVELLWPLFLFFILVAVRHSHPPLEHHECHFPNKPLPSAGTVPWLQGLICNVNNTCFPQ 84
BLAST of ATP binding cassette subfamily A member 1 vs. TrEMBL
Match: N1PB02 (Uncharacterized protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_226736 PE=4 SV=1) HSP 1 Score: 956.822 bits (2472), Expect = 0.000e+0 Identity = 596/1616 (36.88%), Postives = 905/1616 (56.00%), Query Frame = 1 Query: 619 CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANP---KICDAVNTLFNITNVKSY------IDGVSKLFSWIERGLNCTELDRFIPLDSLKDI--DKLTNQSFRNFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIE-VGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXI--------------LKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDP--MNKLINKEKSYYS--------YYCNILKMKLRIN---ATKTE-----IFLNQNPDQKQSKFL----DQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMM-SKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWSPA-SILDIPMVSPECDCSKTGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNS---NSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESG--IVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 C +F+ + + + + P++ GK+ Y P+ ++R++I +AN TF L ++ + +W L + +++SN+ +++ F Y +NP +I LFN +S I+ + + I + +NC E D+F P + +D+ LT A +IF+ P T + Y+IR+ R+DST K +VLDRFWTP PR D KYV+ GF ++Q+ ++ A I T + E +G ++ PYPCY+ DKF ++ LP ++++W +V++L+K+IVYEKE RLKE MK MGL N VHW +WFI+ V++++ V ++ + L++ + S +V+F + + I+ I Q FM+SVFF +AN+A+ GILYF ++ + + E + LLS V+F ++ +E+ G+Q+SN+ Q+ + F + CI +M++D+ IY++I WYVEAVFPGQ+G+ + W F +SYW ++ +P R + + Q E EP++L LG+SI L K+Y + ++ LNLNFYE QIT+FLGHNGAGKTTT+SILTG+F P+ GTA I +DIRT+++ IR+ +G+CPQ+NVLFD LTVE+HI+FY LK M + +I + +I D+ L K N S LSGGMKRKLS+A+AF S+VV LDEPTAGVDP+ARR IWDLL+KYR+ RTIIL+TH MDEAD L DR+AII+QGKL C GS +FLK FG GYYL+L+K++ +++ + + F+ + +A ++E ++ T LP + ++ F +LF++LD H++ + ++SYG+SDT+LEEVFLKVA++ N L ++ + Y + ++ R A+K + + NPD S + + G L+ +Q +A+ IKR++Y +R K F+++ + M+I PWLM SK+ +L TF+ + S +E G G+RCM+P +Y L ++C E++ WS D P EC C ++G Q C +G + Y ++ ++D++ N+TG NISD++LK + ++ YGG F + ++ DS F + + + A + +N+ I L+ K K + +IW N+KGYVSM AY NI +NL+LR+ L YGIS+ N P+ S + + I+++ +++ VIF + IPASFV+FL+EERVSGSK QFVSG+NP VYWV+NF WD++ Y++ I+ I+IF+AF +Y+ NA + LL+ YG A P MYP S F + PS+AFV+L N+ +G I+T+STFIL+ + L EIN I+ KVFL+ P + LGRG++D+ N N + WDI G L SL L + ++ + I IE I + K +E + ED DV ERER++ S D+L + LTK+Y L KNK AV+ L GV GECFGLLGVNGAGKTTTF Sbjct: 358 CNDLFEQIESQQLTRI-FWRQIKPMVRGKIPYAPDTPVVRRLIREANQTFVTLVQVKQLAEDW-LKASPGISEFLSNSDQARNIRDFIDLYMMSNPGDAQIALVQRWLFNGPRDQSAYDWRDSIEYTDYVMTMIVQYMNCFEFDKFEPHKTEEDVVNTGLTYIGDNKLWAGLIFDIDSSENLP---THIKYKIRMDTDRVDSTSKSRVLDRFWTPGPRAKPLPDMKYVVYGFSYIQDMVEHAIIREHTGDSLDEDIGMTVQQFPYPCYINDKFTMAISRSLPLFMILSWIYAVSILVKAIVYEKEQRLKEVMKTMGLTNAVHWCAWFITAFVMMLLSVFLLLIVLKVGTVLEHSDGSVIFVFLLAFTIATIMQCFMISVFFQRANLAAACAGILYFIGHIPYTFCTQWEEYMRTWQKALASLLSSVSFGFGCSYIARYEEQGIGIQWSNIHQSVLQEDDFSMLACIFMMLVDALIYMIIAWYVEAVFPGQFGMPRSWYFFVTKSYWCGYEPGTDGMPNGRAGYE-MDSGQQGQEDEPKHLPLGVSIQKLCKVYKRGQKVAVDGLNLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTEGTAVIYGQDIRTDINEIRKSLGMCPQHNVLFDHLTVEEHIWFYSSLKGMPEEDIRKEMNAMIMDIGLPHKRNEYSAKLSGGMKRKLSVAIAFTAGSKVVILDEPTAGVDPYARRSIWDLLLKYRA-GRTIILSTHFMDEADILGDRIAIINQGKLCCVGSSLFLKSNFGGGYYLTLVKDERKGDSASTSDVKVENATEDGNAGEISTTAFIMERVPEAVLVESIGIEMTYQLPNDKSHTASFEKLFRDLDAHLSSLGLLSYGVSDTTLEEVFLKVANESEEANHLSEEDVRQGTERLTDGGMYARPVTRLSFRKRNFFASKDRESNELLDADGNPDSAVSTASISCNGTGSYKVTGLSLIPRQFLAIFIKRFNYLRRSKKAFISQ-----------------------EPAMEIHPWLMSPSKLQDSHLFTFFSNDLPSEAWTQAIEDLLTQKPG-LGVRCMDPDVYSLKGFRCV-DAEDSQWSNVEEDFDEP---EECSC-ESGYQRCPKGAAGAEASKY-LLPTTDEMYNMTGRNISDWILKTSQEYIKRRYGGLTFGERNDLLRANDTEVDSIFAQ-----LATAAAGDDTNNVTLPGLILDLENLIKNIATKRN-AKIWFNNKGYVSMVAYMNIMNNLVLRAHLPPD-TDPSRYGISLINHPMNRTSSQLYAYTLKASIVDVMISVSVIFAMCLIPASFVLFLIEERVSGSKHLQFVSGVNPVVYWVANFTWDMLNYLVSGILCILIFVAFQQNAYVSQTNAPCLVSLLLLYGWAATPMMYPASHFFNVPSSAFVILGCMNIFLGIISTLSTFILEAF--MEQELDEINAIIMKVFLVLPHYCLGRGLIDMTRNQLVADIFENLGETFFQSPFTWDIVGRNLLSLSILGVFFFFLNICIEYKFWIYSMKCISPCKEQIPVNVEETDEEDIDVVRERERVTLGAASGDILTLEGLTKVYKSPL---------------KNKGHR-AVDRLSVGVHSGECFGLLGVNGAGKTTTF 1911 HSP 2 Score: 192.2 bits (487), Expect = 4.826e-45 Identity = 117/372 (31.45%), Postives = 199/372 (53.49%), Query Frame = 1 Query: 2095 YWVYNIKS----SESIPLMRNNNQNCEINHQAFESEPENLKLG------ISIHNLVKLYPS---NKIP-VINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADA-RMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 +W+Y++K E IP+ +I+ E E + LG +++ L K+Y S NK ++ L++ + + LG NGAGKTTT +LTG + G A++ IR+EM +I Q +G CPQ++ L LT +H+ Y L+ + ++++V I+ + L LS LSGG KRKLS A+A +GN V+FLDEPT G+DP ARR +W+ + R+++LT+H M+E + L +R+ I+ G+ +C GS+ LK +FG+GY ++L ++ ++ + + + + LQ+ + P + S ++F ++++ EMSI Y +S T+L++VF+ A Sbjct: 1817 FWIYSMKCISPCKEQIPVNVEETDEEDID---VVRERERVTLGAASGDILTLEGLTKVYKSPLKNKGHRAVDRLSVGVHSGECFGLLGVNGAGKTTTFKMLTGNIKSTDGDAHLAGHSIRSEMTAIHQNLGYCPQFDALCPLLTPREHLQMYARLRGVPAEDVDTVAEWGIEKLGLVNHAAKLSHQLSGGNKRKLSTAIALVGNPPVIFLDEPTTGMDPKARRFLWNCISGIIKDGRSVVLTSHSMEECEALCNRIVIMVNGQFKCIGSIQHLKNRFGDGYMITLKVTSSSDASQCQIQAVASNMESTFPGIVLKEQHHNMLQYQV--PSSVHTS--LADIFGHIERVREEMSIEDYSVSQTTLDQVFINFA 2181 HSP 3 Score: 72.7886 bits (177), Expect = 9.624e-9 Identity = 53/184 (28.80%), Postives = 84/184 (45.65%), Query Frame = 1 Query: 28 QLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQA-KYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQTQINWLGTNLNEFHVFI----------------------------GNITEIYNSLPSGALNVPKFMKWITSNPNEFI-RLQNSFSYISKRIVPLISTVNKVMSE 489 QLR LLWKN +L+ R+ L+ EL PL++ IL V+ + KY + C F K M S GP+PFL +CT N +C+D + + LN ++ I G + E+ + +G+L+ + I +P+E R+Q+ +S +V I +N SE Sbjct: 7 QLRLLLWKNTKLRLRQPARLVTELVWPLLLFLILAWVKLDRGLKYPIHECHFDGKSMPSAGPLPFLQSLVCTANNTCHDHGRPDEEPGVLNTYNTSILSELFLDLETLLGDQTSSDALVRLVRDFGTLRELNDLSNAGSLSCAFELGTILIDPDELTERIQSQNITLSDDVVAEIGNLNVNTSE 190
BLAST of ATP binding cassette subfamily A member 1 vs. TrEMBL
Match: W5LAQ7 (ATP binding cassette subfamily A member 1 OS=Astyanax mexicanus OX=7994 GN=ABCA1 PE=4 SV=2) HSP 1 Score: 952.584 bits (2461), Expect = 0.000e+0 Identity = 644/1932 (33.33%), Postives = 1021/1932 (52.85%), Query Frame = 1 Query: 19 ISNQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQTQINWLGTNLNEFHVFIGNITE-IYNSLPSGALNVPKF----------------MKWITSNPNEFIRLQNSFSYISKRI-VPLISTV--------------NKVM--SENETTIESG-YNELGEIICGSPE--------------NDFKLFMRNFIKNQRRKRSLLT------CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSK-------LFSW-------------IERGLNCTELDRFIPLDSLKDIDKLTNQSF-----RNFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEG-YYXXXXXXXXXXXXXXXXXXXILKFVKI------------------------------------YIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD-------------PMNKLINKEKSYYSYYCNILK---MKLRINATKTEIFLNQNPDQKQSKFLDQSD----HLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWS----PASILDIPMV--------SPECDCSKTGNQI----CNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRK-----------LYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKT-SFTRIWANSKGYVSMPAYANIF--XXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYN----ALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 IS QLR LLWKNF +RR+ LLIE+ PL + FIL AVR + Y+ C F K M S G +P++ +C N C+ E +GN + I + L S A + + +K + +N + + +F + K + +PL S + N+++ + N T S Y + I+CG PE +++K N+ + S+ C + ++ N I + ++ L PL+ GK+ Y P+ +II++ N TF+ L LR W + +++ ++ ++ ++ + +A T +++ +V S++ S+ F+W I R + C LD+ P+ + +KL N S R F A IIF + Q + + ++Y+IR+ + ++ T K K D +W P PR + F D +YV GF +LQ+ I+Q+ I VT + + G + MPYPCY+ D FL+ ++ +P + +AW SV ++IK +VYEKE+RLKE M++MGL+N + W SWFIS+++ L++ ++ + L++ + S VVF + + + I Q F++S F++AN+A+ GGI+YFT Y+ +V+ + + + L LLS VAF ++ +E+ G+Q+ NLF +P E + + II+M +D+FIY ++TWY+EAVFPGQYG+ +PW F +SYW + P+++ N E EP +L +G+ I NLVK+Y K +++L L FYE QIT+FLGHNGAGKTTT+SILTG+F P+SGTAYI+ +DIR+E+ +IRQ +G+CPQ+NVLF LTVE+H++FY LK + + E+++ + +I+ D L K + + LSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP+ARRGIWDLL+KYR+ RTIIL+THHMDEAD L DR+AIIS GKL C GS +FLK G G Y + K +S RN + + +VK ++ +ARM+E+ + T +LP F ELF ++D H+A++ I SYG+SDT+LEE+FLKVA+D P+ + + ++ + + + LK R + ++E+ +P+ +++ +L SD + ++G+ L +QQ +AL KR+ YA+R KGF A+++LP + + ++F I K + + PW+ E+ TF + +L + G G RCM + + C +++ WS P S+L++ M SP C+CS G + C G PP +I + D L NLTG NISDYL+K + ++ K YGGF ST +++ P EE+ D + + N + + +F+ L I G+ T + +IW N+KG+ S+ A+ N+ L K K YGI+ N P+ + + + +++ ++I VIF +SF+PASFV+FL++ERV+ +K QF+SG+ P++YW++NF+WD+ Y++P ++I+IF+ F ++Y+ + N LLL+ YG +I P MYP SF PSTA+VVL + N+L+G ++STF+L++ N + INDILK V LIFP F LGRG++D+ N ++++ + N +WD+ G+ LF++ + ++I+ ++I+ + N+ L I ED DV ER+R+ S D+L + LTK+Y + ++ AV+ LC G+ GECFGLLGVNGAGKTTTF Sbjct: 3 ISTQLRLLLWKNFTYRRRQTLQLLIEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKAMPSAGTLPWIQGIVCNANNPCFRHP-------TPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDKSLDGFKELIHAVKALQNNTSGKQAVGVTFKSLGKLLEMPLTSLMFPQLASMRSWSDLRNEILFLTRNATGSPSQMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNYKALFGNYNSSDEEPVSVYDNTSTPFCNNLMKNMETNPISRM-IWRALKPLLMGKILYTPHTPATHKIIKEVNRTFQELGVLRDLGGMWE-ETRPKAWNFMEHSEEMDLLRTLLQNNVTAAFFSAQLTGTQWSVQDVISFLTKQSEDTRPHGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVSTE---EKLINDSLGLLDNRKFWAGIIFPD-IQSNSSELPPHVNYKIRMDIDNVERTNKIK--DAYWDPGPRADPFEDLRYVWGGFSYLQDVIEQSIIRAVTGTKE-KTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLMSAGLLVLLLKMGNLLPYSDPGVVFLFLGSFAVVTIMQCFLISTVFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGLPAKVIASLLSPVAFGFGCEYFALFEEQGVGIQWKNLFSSPMEKDDYSLTTSIIIMYVDAFIYGVMTWYIEAVFPGQYGIPRPWYFPFTKSYW-FGEGDQRPTPILKGRKANS--GAVCIEEEPTHLDMGVYIENLVKVYRHGKKLAVDDLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIMGKDIRSELSAIRQSLGVCPQHNVLFSMLTVEEHVWFYARLKGLSEEEVKAEIDQILYDTGLPHKRKSRTCELSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKYRT-GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKKEPEASLSSCRNSSSTVSYVKKDDEASESSSDAGLGSDHESDAATAIDISLISGLIIKHVPNARMVEDLGHEITYILPYESAKDGAFVELFHDMDDHLADLGISSYGVSDTTLEEIFLKVAEDSGVDTEILSDGTFPIRR--RRRHAFGADHQSCLKPLTEDDRYDGNESEV----DPESRETDYLSGSDGKGSYQIQGWSLKRQQFLALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLALQPWMY------EDQVTFISDDAPEDASTQRLLAALMEGPG-FGTRCMEGE--PIPDAPCTIGDDD--WSIPEVPESVLEVLMSQNWTMDNPSPACECSSDGKKKMLPECPASAGGLPPPQIKI-SERDTLQNLTGRNISDYLVKTYAQIIGKSLKNKVWVNEFRYGGFSLGARST-----QVL---PPAEEIDDAIARVRVIFNLEKVTADRFLKSLSAF--INGLDTKNNVKIWFNNKGWHSIGAFLNVMNNGILRANLPPEKDPSK---YGITAFNHPLNLTKEQLSQVALVTTSVDVLVSICVIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPFLYWLANFIWDMCNYVVPATLVILIFVCFQQKAYVSATNLPVLALLLLLYGWSITPLMYPASFLFEIPSTAYVVLTSVNILIGINGSVSTFVLELFGNN--EIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAM-ADALERFGENRFRSPFEWDMVGKNLFAMAVEGVVFFIITVLIQYRFFFK------PNAKLSPI---GEEDEDVARERQRIVSGAGQGDILELRELTKVY--------------------KRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTTTF 1851 HSP 2 Score: 194.126 bits (492), Expect = 1.364e-45 Identity = 105/320 (32.81%), Postives = 174/320 (54.37%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 + + L K+Y + P ++ L + + LG NGAGKTTT +LTG +SG A++ + I E+D + Q +G CPQ++ + D LT +H+ FY +L+ + + E+ V I+ + L + + + SGG RKLS AMA IG VVFLDEPT G+DP ARR +W+ + R+++LT+H M+E + L R+AI+ G+ +C GS+ LK +FG+GY + + + + ++KF++ + + + E+ R LP + +F L +H + I Y +S T+L++VF+ A D Sbjct: 1807 LELRELTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTTTFKMLTGDTVVTSGEAFLARKSILREIDQVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEREVCEVAEWGIRKLGLVKYSDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRALWNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGY-----TIILRVAGPDPDLQPVMKFIESELPGSTLKEKHRNMLQYQLPS---SVSSLAHIFSILAKHKDFLRIEDYSVSQTTLDQVFVNFAKD 2118
BLAST of ATP binding cassette subfamily A member 1 vs. TrEMBL
Match: A0A3Q2D7H1 (Zgc:172302 OS=Cyprinodon variegatus OX=28743 PE=4 SV=1) HSP 1 Score: 934.865 bits (2415), Expect = 0.000e+0 Identity = 650/1875 (34.67%), Postives = 985/1875 (52.53%), Query Frame = 1 Query: 28 QLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQTQINWLGTNLNEFHVFIGNITEIYNSLPSGALNVPKFMKWITSNPNEFIRLQNSFSYISKRIVPLISTVNKVMSENETTI-ESGYNELGEIICGSP--------------ENDFKLFM-RNFIKNQRRKRSLLT---CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTF---KILDNLRLASVEWRLHFQTF-----LLDYISNNVFIN-----------DVKKFCKAYYSANPKICDAVNTLFNI-TNVKSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKD-IDK-LTNQSFRNFLAVIIF---NETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPL---MRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXX-----------------------------XXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQ---------NPDQKQSKFL----DQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWSPASIL-------------DIPMVSPECDCSKTGNQI----CNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFT-RIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEM--EQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSN------SIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIR--NTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 QL LLWKN +RR L+IEL PL + IL +VR S YK C F K + S+G +P++ +C N C+ + F I + L A V + + + F L S + +R L T++ + EN T + + I+CG P +N+ K F+ RN ++ T C+ + QS N + + ++ + PL GK+ Y P+ +RQ+I++ N TF +I +L A +E + + LL V IN + +F P+ A T ++ NV+S I + C LD+ LD+ ID+ L R F A ++F N + L P ++Y+IR+ + + T K K DRFW P P + F D +Y+ GF+++Q+ +++A ++T + G + MPYPCY+ D FL+ L LP + +AW SV ++IK +VYEKE+RLKE M++MGL+ W+SW IS+++ +I V++ L+ I S VVF + + + I Q F++S FFSKAN+A+ GG++YF+ Y+ +V+ + L+ T LS VAF ++ +E+ G+Q+ NL +P E + I ++ +D+FIY L WY+EAVFPGQYG+ +PW F+ +YW IPL M E + E++P + LG++I NLVK+Y +N+LNL FYE QIT+FLGHNGAGKTTTIS+LTG+F P++GT Y+ DIR +MD IR+ +G+CPQ+NVLFD LTVE+H++FYG LK + + + + + +++DV L+ K + + +LSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP++RRGIWDLL+KYR DRTIIL+TH+MDEA+ L DR+AIIS+GKL CCGS +FLK K G GYYL+++K + +++ +L V+ +I AR++E+SR + I LPQ LDQ + E+ I SYGLSD++LEE+FL+VA++ ++ S S ++ + + + ++ IF++ P + Q L Q L G+ L QQ+ AL +KR+ YA+R +G LA+++LP + +L +LF I K +++ PW M E F + + N LE+ D G +CM+ +QC N P D P SPEC CS + C D G PP + T D L NLT YNISDYL+K +P++ +K YGGF S G +++ I + + L+D V A + + N D ++F ++ FT ++W N+KG+ +M ++ N+ +N LLR+ L A + +GI+ N P+ + EQ T+ + +++ ++I VIF +SF+PASFV+FL+EERVS +K QFVSG+ P +YW++NF+WD++ Y +P +++++IFI F QSY+ N A ILLL+ YG +I P MYP SF S PSTA+VVL + NL +G +I+TF+L++ +N E+N ILKKVFLIFP F LGRG++D+ N + +K + LQWD G+ LF++ + + ++I I+++ Y R + ED DV ERER+ S + D+L +I+L+K+Y R+ AV+ LC G+ ECFGLLGVNGAGKT+TF Sbjct: 6 QLYLLLWKNITYRRRNKIQLIIELLWPLFLFVILISVRHSHPPYKQGQCHFPNKALPSVGTVPWIQSIICNINNPCFHSPTPGETPGQVGNFD------NSILSRLFVDAQTVLSYSG--NRSFSTFQDLMGSVRLLGERFGSL-PTLSLLSPENRTALPRESFRAFSRIMCGHPKVGGERIPSLNWYEDNNIKSFLGRNGTEDVVPDGDNTTTPFCKGLIQSLESNPLSRI-VWRGIKPLFIGKLLYTPDTPAVRQVIKEVNKTFEDLQIFQDLNDAWMEVGPQIKNYMETSDLLRRPEIAVLINMRLENTTWTASRIARFLSTPSPDVPRKPGAPPTWLDLYNNVESSI------------AMLCFSLDKMEGLDTEGQLIDRALQLLEDRQFWAGVVFLLPNTSSSQLPPH----VTYKIRMDIDDVTRTNKIK--DRFWDPGPAADPFNDMRYIWGGFVYIQDLVEKAVSYVLTGVKQ-NTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAMIIKGVVYEKEARLKETMRIMGLSTGTLWLSWLISSLIPFLISAVLLIALLKWGDILPYSDPTVVFFFLMAFATATIMQCFLISTFFSKANLAAACGGLIYFSLYLPYVLCVAWRDHLTSTHRVFASFLSPVAFGFGCEYFSQYEEQGVGIQWFNLRASPVEGDTYSFTTSITMLYVDAFIYALAAWYIEAVFPGQYGIPRPWYFIFQLNYW-------GGIPLEVGMPIPPAPAEQDEDYIETDPSTMNLGVNIRNLVKIYKKGGKVAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPTAGTVYVKGMDIRYDMDIIRKTLGVCPQHNVLFDMLTVEEHVWFYGCLKGLSEENVMAEISALLEDVGLSHKRHDQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDLLLKYRK-DRTIILSTHYMDEAELLGDRIAIISKGKLCCCGSPLFLKSKLGSGYYLTVVKREELSTSTPSNSSICTSASTSTNKLPSLSSLSEDTGLGSEETTLLALVQQHIPGARLVEDSRRETMINLPQAAAKDGSLAVFLSKLDQKLVELGISSYGLSDSTLEEIFLRVAEETGVDAASEPPS--SVQPSVTRAEDQPEEPESIIFISGLTLIISNLFLPAEPQETDLLSGNGQGGVPLTGWWLTWQQLRALFVKRWLYARRSRRGILAQIVLPAVFVLIALLFSLIVPPFGKYPELELQPW-----MYGEQYTFFSNDAPGNPAMENLLEALL--DQPGFGTKCMDKEEELNSTHQCEAERGGNFTRPQISYSTWQKLKRGNWSRDRP--SPECQCSTEDTRRMLPDCPDGAGGFPPPQMKKAT-GDILQNLTTYNISDYLVKTYPQILKKRYGGF-----SLGGSTTQNISEV---QHLQDSVMAIRTRYQVKQKN-----DKFCRSFNLF-----FTSQVWYNNKGWHAMVSFVNVMNNGLLRASLPPGAERR-RHGITAYNHPLNLTKEQLTEIAMMTTS--VDVLVSICVIFAMSFVPASFVLFLIEERVSKAKHLQFVSGVQPILYWLANFVWDMLNYSVPAMMVVLIFICFQQQSYVSETNLPALILLLLLYGWSITPLMYPASFVFSIPSTAYVVLTSVNLFIGINGSIATFVLELFHLN-----EVNRILKKVFLIFPHFCLGRGLIDMAKNQALADAFQRLGMNTIKQTLDPLQWDFVGKNLFAMAAEGVIFFIFTILLQYKFF----------IYYSRPSLPPLGPEDEDVARERERVKSGKAHSDILTMIDLSKVYKA--------------------GRKPAVDRLCLGIPRSECFGLLGVNGAGKTSTF 1775 HSP 2 Score: 177.178 bits (448), Expect = 1.609e-40 Identity = 101/345 (29.28%), Postives = 183/345 (53.04%), Query Frame = 1 Query: 2116 SSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEV 3150 S S+P + +++ + +S + + +++ +L K+Y + + P ++ L L S+ LG NGAGKT+T +LTG + G A++ + EM+ + Q +G CPQ++ + D LT +H+ Y L+ + + + V ++ + LT+ + SGG KRKLS A++ IG V+FLDEPT G+DP A+R +W+ ++ R ++LT+H M+E + L R+AI+ G+ QC GS+ LK +FG+GY + L + + L+ I + + ++ LQ+ LP + ++F L + E+ I+ + +S T+L++V Sbjct: 1700 SRPSLPPLGPEDEDVARERERVKSGKAHSDI-LTMIDLSKVYKAGRKPAVDRLCLGIPRSECFGLLGVNGAGKTSTFRMLTGDTQITHGEAFLSQHSVLREMERVHQLMGYCPQFDAISDLLTGREHLELYARLRGVPEESVTKVAQWGVRKLGLTQYAEQEAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSVTKEGRAVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLADIKADPESCPIDTHLR-KSFPIIELKERHQNVLQYQ--LPSHACC---LADVFDVLGNNSEELGIVDFSVSQTTLDQV 2037
BLAST of ATP binding cassette subfamily A member 1 vs. TrEMBL
Match: A0A3B4Y390 (Uncharacterized protein OS=Seriola lalandi dorsalis OX=1841481 PE=4 SV=1) HSP 1 Score: 928.702 bits (2399), Expect = 0.000e+0 Identity = 645/1906 (33.84%), Postives = 1006/1906 (52.78%), Query Frame = 1 Query: 25 NQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQTQINWLGTNLNEFHVFIGNITE-IYNSLPSGALNVPKFMKWITSNPNEFIRLQNSFSYISKRIVPLISTV------------NKV--MSENETTIESG-YNELGEIICGSPE--------------NDFKLFMRNFIKNQRRKRSLLT------CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSA---NPKICDAVNTLFNITNVKSYIDGVSKL----FSW-------------IERGLNCTELDRFIPLDSLKDIDKLTNQSF-----RNFLAVIIFNETFQYLTPKNTTF---LSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSES--IPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYY-------------------------------XXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD-------PMNKL--INKEKSYYSYYCNILKMKLRINATKTEIFLNQ---NPDQKQSKFLDQSD----HLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWSPASILDIPMV---------------SPECDCSKTGNQI----CNDLRSGGPPNSYRI-MTSSDKLNNLTGYNISDYLLKNFPKLSRKLY--------GGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHN-QSNLNSLKFIDYLQKTFKIYGIKT-SFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYN----ALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 QL LLWKNF +RR+ LL+E+ PL++ FIL AVR + Y+ C F K M S G +P++ LC N C+ E +GN + I + L S A + + + N + F L ++S S + + L+S + N++ +++N T+ S Y + I+CG PE +++K N ++ SL C + ++ N + + ++ L PL+ GK+ Y P+ +++I + N TF+ L R W + + +++ N+ ++ ++ K +A + ++ D T+ +++N S +L +W I R + C LD+ P+ S ++L NQS R F A I+F + + P T L+Y+IR+ + ++ T K K D +W P PR + F D +Y+ GF +LQ+ I+Q I VT + + G + MPYPCY+ D FL+ ++ +P + +AW SV +++KS+VYEKE+RLKE M++MGL+N + W SWFIS+++ L+I ++ + L+ + S VVF + + + I Q F++S F++AN+A+ GGI+YFT Y+ +V+ + + + LLS VAF ++ +E+ G+Q+ NL +P E F + IILM DSF+Y ++TWY+EAVFPGQYG+ +PW F +SYW + K +S +PL R N E EP +L+ G+ I NLVK+Y K ++ L L FYE QIT+FLGHNGAGKTTT+SILTG+F P+SGTAYIL DIRTE+ +IRQ +G+CPQ+NVLF LTVE+HI+FY LK + + +++ + +I++D L K + + LSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP+ARRGIWDLL+ YR RTIIL+THHMDEAD L DR+AIIS GKL C GS ++LK + G GYY + S I + ++ ARM+E+ + T VLP F ELFK+LD + ++ I SYG+SDT+LEE+FLKVA+D P + + + + +++ + LR N+ +P+ +++ +L+ +D + + G+ L +QQ +AL KR+ A+R KGF A+++LP + + ++F I K +++ PW+ E+ TF + + KL G G RCM+ + + C +E+ W I D+P SP C CS G + C G PP R+ ++++D L NLTG NISDYL+K + ++ K GF F F ++ P E+ D + + Q + +F+D L I G+ T + +IW N+KG+ S+ A+ N+ +N +LR+ L +YGIS N P+ + + + +++ ++I VIF +SF+PASFV+FL++ERVS +K QF+SG+ P +YWV+NF+WD+ Y++P ++++IFI F ++Y+ S N LLL+ YG +I P MYP SFF PSTA+VVL + N+L+G +ISTF++++ N + INDILK V LIFP F LGRG++D+ N ++++ + N L+WD+ G+ LF++ + ++I+ ++I+ R S L ++ ED DV ER+R+ + D+L + LTK++ + ++ AV+ LC G+ GECFGLLGVNGAGKTTTF Sbjct: 5 TQLGLLLWKNFTYRRRQTLQLLVEIVWPLLIFFILIAVRLNYPPYEQHECHFPNKAMPSAGTLPWIQGILCNANNPCFRNP-------TPGESPGVVGNFNDSIISRLFSDAKKILLYSQ-NDKNLDGFKELAQTWSK-SNQTLSLVSGLQLAGMKSWIDLRNEIIFLTQNATSSPSTMYQAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNHNSSEDEPTSLYDNSSTPYCNSLVKNMDSNPMSRM-IWQALKPLLMGKILYTPHNPATQRVIHEVNRTFQELGVFRDLGGMWE-EMRPKVWNFMENSQQMDLIRTLLKNNVTATFFHAQLSDTDWTVADVSNFLSKKVDDPRLPGSTVTWREVFNETDQAIMSISRFMECVNLDKLEPVSSE---ERLVNQSMVLLEDRKFWAGIVFPD----IAPNATELPSKLNYKIRMDIDNVERTNKIK--DAYWDPGPRADPFEDMRYIWGGFSYLQDVIEQGIIRAVTGTKE-KTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIILKSVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAGLLVLLLKKGNLLPYSDPGVVFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGFGAKVFASLLSPVAFGFGCEYFALFEEQGVGIQWKNLVSSPLEEDDFSLRTAIILMYFDSFLYGVLTWYIEAVFPGQYGIPRPWYFPFTKSYW-FGEKDGKSNKVPLTRRGNSGA----VCMEEEPAHLEPGVYIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGRDIRTELSTIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEQVKGEIEQILQDTGLPHKRTSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLNYR-QGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKNQLGTGYYLTLVKKEPEPSLSSCRNSSSTVSFTKKEECASVSSSDAGLGSEHESEAATIGDLILRHVPAARMVEDLGHELTYVLPYRAAKDGAFVELFKDLDVKLPDLGISSYGVSDTTLEEIFLKVAEDNGVDTEVPSDGTLPVRRRRRTHAFGGGDHQSCLRPLTEDDNNDCNESDGDPECRETDWLNCTDGKGSYQVGGWSLKKQQFVALMWKRFLNARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWMY------EDQVTFISDDAPGDANMQKLLDALMDAPG-FGTRCMDG--HPIPEAPCTMGDED--W---HIPDVPESVQQLFSSRNWTMEDPSPPCFCSCDGKKKMLPDCPAGAGGLPPPEVRMNLSATDTLQNLTGRNISDYLVKTYAQIIGKSVWFYFSYSERGFSFCRYGGFSLGARSTQVLPPANEIDDAIERVRKIFELQKGAAADRFLDSLSGF--INGLDTKNNVKIWFNNKGWHSIGAFINVMNNGILRANLPDDKDPR-EYGISAFNHPLNLTKEQLSQVALVTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMQFISGVQPLLYWVANFIWDMCNYVVPATLVVLIFICFQQKAYVSSTNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSISTFVMELFGNN--EIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAM-ADALERFGENRFRSPLEWDMVGKNLFAMAVEGVVFFIITVLIQY----RFCIKPRAVSKLTKLGALGEEDEDVARERQRIVNGLGHGDILELRQLTKVF--------------------KRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTTTF 1839 HSP 2 Score: 190.66 bits (483), Expect = 1.246e-44 Identity = 104/331 (31.42%), Postives = 181/331 (54.68%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKS 3204 + + L K++ + P ++ L + + LG NGAGKTTT +LTG +SG A++ + I E+D + Q +G CPQ++ + + LT +H+ Y +L+ + + E+ V I+ + L + + + SGG RKLS AMA IG VVFLDEPT G+DP ARR +W+ + R+I+LT+H M+E + L R+AI+ G+ +C GS+ LK +FG+GY + + + ++KF++ ++ + + E+ R LP + + T +F L ++ + I Y ++ T+L++VF+ A D ++ +K+ S Sbjct: 1795 LELRQLTKVFKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTTTFKMLTGDTVVTSGEAFLAGKSILREIDQVHQNMGYCPQFDAINELLTGREHLELYAVLRGIPEKEVCDVAEWGIRKLGLVKYADKAAGSYSGGNMRKLSTAMALIGAPPVVFLDEPTTGMDPKARRALWNCIHSVIKEGRSIVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGY-----TIILRVAGPDPDLLPVMKFIESELSGSTLKEKHRNMLQYQLPSSLTS---LTHIFSILAKNKETLRIEDYSVTQTTLDQVFVNFAKDQSDEYHSKDTS 2117
BLAST of ATP binding cassette subfamily A member 1 vs. TrEMBL
Match: A0A3Q3L3K9 (Zgc:172302 OS=Mastacembelus armatus OX=205130 PE=4 SV=1) HSP 1 Score: 928.317 bits (2398), Expect = 0.000e+0 Identity = 649/1877 (34.58%), Postives = 989/1877 (52.69%), Query Frame = 1 Query: 28 QLRTLLWKNFRLKRRKWKI-LLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYD------------QTQINWLGTNLNEFHVF--IGNITEIYNSLPSGALNVPKFMKWITSNPNEFIRL---QNSFSYISKRIVPL---ISTVNKVMSENETTIES-GYNELGEIICGSPE--------------NDFKLFMRNFIKNQRRKRSLLT-----CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNV---FINDVKKFCKAYYSANPKICDAVNTLFNITNVKS---------------YIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSF-----RNFLAVIIF--NETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXX---------------------------------XXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDP-------MNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHL-LKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMG--KENLNTFYRKENISLGLINKLESEYRSDL-GESGIRCMNPSIYRLDNYQCFYRNENNMWSPASILDIPMVSPECDCSKTG-NQICND--LRSGG-PPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEM--EQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYN---SNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 QL LLWKN +RR I L+IEL PL + IL +VR S YK C F K + S G +P++ +C N C+ Q Q+ L N + F + + N L + ++P T E RL Q +F+ +P+ ++ + + +EN T + + + I+CG PE ND K F+ KN L C+ + N + + ++ + PL GK+ Y PN ++Q++++ N TF+ L L + W + + +Y+ ++V + D+ + + N ++ D T+ IT+ S ++D + + I TE L+ L+ +L +++ R A ++F T P + T Y+IR+ + + T K K DRFW P P + F D +Y+ GF+++Q+ +++A ++T + G + MPYPCY+ D FL+ L LP + +AW SV ++IK +VYEKE+RLKE M++MGL W+SW IS++V ++ V++ L+ I S VVF + + + I Q F++S FFSKAN+A+ GG++YF Y+ +V+ + L+ T LS VAF ++ +E+ G+Q+ NL +P E + II++ +D+FIY + WY+EAVFPG+YG+ +PW F+ +YW + +P+ ++ E +H E EP NL LG+SI NLVK+Y +N+LNL FYE QIT+FLGHNGAGKTTTIS+LTG+F P+SGT YI DIR +MD IR+ +G+CPQ+NVLFD LTVE+H++FYG LK M E++ L ++ DV L K + + +LSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP++RRGIWDLL+KYR DRTIIL+TH+MDEA+ L DR+AIISQGKL CCGS +FLK + G GYYL+ +Q+ S N +L + +I AR++EES + + LPQ +LDQ + E+ I SYGLSD++LEE+FLKVA++ + ++++E+ C + + T I L P + D + L G+ L QQ+ AL IKR+ YA+R +GF A+++LP L +L +LF I K +++ PW+ + + EN+ L+++ E G M P + +Q FY+ WS D P SPEC CS ++ D L +GG PP + +T D L NLTGYNISDYL+K + K+ +K YGGF S G +++ + P ++++ V +A + + ++ + G FT++W N+KG+ +M ++ N+ +N LLR+ L + + +GI+ N P+ + EQ T+ + +++ ++I VIF +SF+PASFV+FL+EERVS +K QFVSG+ P +YW++NF WD++ Y +P ++++IFI+F QSY+ N A ILLL+ YG +I P MYP SF + PSTA+VVL + NL +G +I+TF+L++ +N E+N ILKKVFLIFP F LGRG++D+ N K + LQWD G+ LF++ + + ++I I+++ R S L D DV ERER+ S + D+L +I+L+K+Y R+ AV+ LC G+ G+CFGLLGVNGAGKT+TF Sbjct: 6 QLTLLLWKNITYRRRNKVIQLIIELLWPLFLFVILISVRHSHPPYKQSQCHFPNKALPSAGTLPWIQGIICNINNPCFHSPTPGETPGQVAQMQLKDLVCNASMLGQFLTVDEGEAVMNDLQTQLCDLP------TDVLREAERLFVSQLNFTKFFTVGIPVQGYLAALRLLSTENRTALPTESFRAFSRIMCGHPEVGGERIPSLNWYEDNDIKSFLG---KNGTEDTDLDHDNTPFCKSLIHGLESNPLSRI-VWRGIKPLFIGKLLYTPNTPAVQQVMKEVNKTFEDLQILLELNEAW-IEVGPRIKNYMESSVEIQLLQDLLRRPEVAVLVNLRLQDTSWTVSRITHFLSTPSPDAPRLPGEPPTWLDIYNDINHTITTLAQITECFSLNKLEGLETEGQLIDRALVLLEDRQLWAGVVFLLPNTSSLRVPPHVT---YKIRMDIDDVTRTNKIK--DRFWDPGPAADPFNDMRYIWGGFVYIQDLVERAVSRVLTGVQQT-TGIYVQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAMIIKGVVYEKEARLKETMRIMGLGTGTLWLSWLISSMVPFLVSAVLLIALLKWGDILPYSDATVVFFFLMAFATATIMQCFLISTFFSKANLAAACGGLIYFGLYLPYVLCVAWRDHLNTTHRVLASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLRSSPVEGDSYSFTLSIIMLYVDAFIYAIAAWYIEAVFPGEYGIPRPWYFIFQLNYW-GGVPLEAGMPIPPAPSEQDE-DH--IEPEPTNLILGVSIRNLVKIYKKGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPTSGTIYIKGMDIRYDMDIIRRTLGVCPQHNVLFDILTVEEHVWFYGCLKGMSGAEVKDELDTLLDDVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDLLLKYRK-DRTIILSTHYMDEAELLGDRIAIISQGKLCCCGSPLFLKSRLGSGYYLTVVKREGLDTSTPSSTSICTSISTNKLPPLKDSDSSMSQDTGLGSEENLAALLSLAQHHIPGARLVEESGREAVMNLPQTAAKDGSLAIFLLDLDQRLGELGISSYGLSDSTLEEIFLKVAEETGVDAEPDIGSIMSEEEGCGRSLCIYHPI-----TSHTVILLFSEPQETDLLSGDGRGGVPLTGWWLTWQQLRALFIKRWLYARRSRRGFFAQIVLPALFVLVALLFSLIVPPFGKYPALKLQPWMYGEQYTFFSNDAPGNSEMENLLEALLDQPGFGTNPQCEAERGGLFMRPQV-SYSTWQMFYKGN---WSS----DRP--SPECQCSTEDVRRMLPDCPLGAGGLPPPQIKRLT-GDILQNLTGYNISDYLVKTYSKILKKRYGGF-----SLGGSATQTLSQVP---QVQNSVMEVRARYR---------VPQVEGSVSFKGTNV-FTQVWYNNKGWHAMVSFVNVMNNGLLRANLPPGPER-MKHGITAYNHPLNLTKEQLTEMAMMTTS--VDVLVSICVIFAMSFVPASFVLFLIEERVSKAKHLQFVSGVKPILYWLANFTWDMLNYAVPATMVVLIFISFQQQSYVSETNLPALILLLLLYGWSITPLMYPASFVFTVPSTAYVVLTSINLFIGINGSIATFVLELFHLN-----EVNRILKKVFLIFPHFCLGRGLIDMAKNQAMADAFQRLGTKQTLDPLQWDFVGKNLFAMAAEGVVFFIFTILLQYKFFIRFRYFFFLISPLPM-------DEDVARERERVKSGKAQSDILTMIDLSKVYKA--------------------GRKPAVDRLCLGIPRGDCFGLLGVNGAGKTSTF 1791 HSP 2 Score: 177.948 bits (450), Expect = 9.427e-41 Identity = 109/341 (31.96%), Postives = 182/341 (53.37%), Query Frame = 1 Query: 2188 EPENLKLG------ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRK--FTELFKNLDQHMAEMSIISYGLSDTSLEEVF----LKVADDP 3174 E E +K G +++ +L K+Y + + P ++ L L LG NGAGKT+T +LTG + + G A++ + + T+M+ + Q +G CPQ++ L D LT +H+ Y L+ + + + V +K + LT+ + SGG KRKLS A++ IG + V+FLDEPT G+DP A+R +W+ ++ R ++LT+H M+E + L R+AI+ G+ QC GS+ LK +FG+GY + L + + V Y+ D+ E + + VL Q + SR +F L + E+ II + +S T+L++V L++ DP Sbjct: 1733 ERERVKSGKAQSDILTMIDLSKVYKAGRKPAVDRLCLGIPRGDCFGLLGVNGAGKTSTFRMLTGDTAVTYGEAFLNHYSVLTKMERVHQLMGYCPQFDALSDLLTGREHLELYARLRGVQEGSVAKVAQWGVKKLGLTQYAEREAGGYSGGNKRKLSTAISLIGAAPVIFLDEPTTGMDPKAKRFLWNCILSVTKEGRAVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLADTKSNPDSCP-------VSTYMKDSFPSIELKERHQNVL-QYQLPSRSCCLARVFDVLANNYEELGIIDFSVSQTTLDQVRATIKLRIKVDP 2065
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Cavefish
Match: ENSAMXT00000016919.2 (pep primary_assembly:Astyanax_mexicanus-2.0:8:9912642:9956080:1 gene:ENSAMXG00000016432.2 transcript:ENSAMXT00000016919.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 952.584 bits (2461), Expect = 0.000e+0 Identity = 644/1932 (33.33%), Postives = 1021/1932 (52.85%), Query Frame = 1 Query: 19 ISNQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQTQINWLGTNLNEFHVFIGNITE-IYNSLPSGALNVPKF----------------MKWITSNPNEFIRLQNSFSYISKRI-VPLISTV--------------NKVM--SENETTIESG-YNELGEIICGSPE--------------NDFKLFMRNFIKNQRRKRSLLT------CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSK-------LFSW-------------IERGLNCTELDRFIPLDSLKDIDKLTNQSF-----RNFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEG-YYXXXXXXXXXXXXXXXXXXXILKFVKI------------------------------------YIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD-------------PMNKLINKEKSYYSYYCNILK---MKLRINATKTEIFLNQNPDQKQSKFLDQSD----HLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWS----PASILDIPMV--------SPECDCSKTGNQI----CNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRK-----------LYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKT-SFTRIWANSKGYVSMPAYANIF--XXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYN----ALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 IS QLR LLWKNF +RR+ LLIE+ PL + FIL AVR + Y+ C F K M S G +P++ +C N C+ E +GN + I + L S A + + +K + +N + + +F + K + +PL S + N+++ + N T S Y + I+CG PE +++K N+ + S+ C + ++ N I + ++ L PL+ GK+ Y P+ +II++ N TF+ L LR W + +++ ++ ++ ++ + +A T +++ +V S++ S+ F+W I R + C LD+ P+ + +KL N S R F A IIF + Q + + ++Y+IR+ + ++ T K K D +W P PR + F D +YV GF +LQ+ I+Q+ I VT + + G + MPYPCY+ D FL+ ++ +P + +AW SV ++IK +VYEKE+RLKE M++MGL+N + W SWFIS+++ L++ ++ + L++ + S VVF + + + I Q F++S F++AN+A+ GGI+YFT Y+ +V+ + + + L LLS VAF ++ +E+ G+Q+ NLF +P E + + II+M +D+FIY ++TWY+EAVFPGQYG+ +PW F +SYW + P+++ N E EP +L +G+ I NLVK+Y K +++L L FYE QIT+FLGHNGAGKTTT+SILTG+F P+SGTAYI+ +DIR+E+ +IRQ +G+CPQ+NVLF LTVE+H++FY LK + + E+++ + +I+ D L K + + LSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP+ARRGIWDLL+KYR+ RTIIL+THHMDEAD L DR+AIIS GKL C GS +FLK G G Y + K +S RN + + +VK ++ +ARM+E+ + T +LP F ELF ++D H+A++ I SYG+SDT+LEE+FLKVA+D P+ + + ++ + + + LK R + ++E+ +P+ +++ +L SD + ++G+ L +QQ +AL KR+ YA+R KGF A+++LP + + ++F I K + + PW+ E+ TF + +L + G G RCM + + C +++ WS P S+L++ M SP C+CS G + C G PP +I + D L NLTG NISDYL+K + ++ K YGGF ST +++ P EE+ D + + N + + +F+ L I G+ T + +IW N+KG+ S+ A+ N+ L K K YGI+ N P+ + + + +++ ++I VIF +SF+PASFV+FL++ERV+ +K QF+SG+ P++YW++NF+WD+ Y++P ++I+IF+ F ++Y+ + N LLL+ YG +I P MYP SF PSTA+VVL + N+L+G ++STF+L++ N + INDILK V LIFP F LGRG++D+ N ++++ + N +WD+ G+ LF++ + ++I+ ++I+ + N+ L I ED DV ER+R+ S D+L + LTK+Y + ++ AV+ LC G+ GECFGLLGVNGAGKTTTF Sbjct: 3 ISTQLRLLLWKNFTYRRRQTLQLLIEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKAMPSAGTLPWIQGIVCNANNPCFRHP-------TPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDKSLDGFKELIHAVKALQNNTSGKQAVGVTFKSLGKLLEMPLTSLMFPQLASMRSWSDLRNEILFLTRNATGSPSQMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNYKALFGNYNSSDEEPVSVYDNTSTPFCNNLMKNMETNPISRM-IWRALKPLLMGKILYTPHTPATHKIIKEVNRTFQELGVLRDLGGMWE-ETRPKAWNFMEHSEEMDLLRTLLQNNVTAAFFSAQLTGTQWSVQDVISFLTKQSEDTRPHGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVSTE---EKLINDSLGLLDNRKFWAGIIFPD-IQSNSSELPPHVNYKIRMDIDNVERTNKIK--DAYWDPGPRADPFEDLRYVWGGFSYLQDVIEQSIIRAVTGTKE-KTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLMSAGLLVLLLKMGNLLPYSDPGVVFLFLGSFAVVTIMQCFLISTVFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGLPAKVIASLLSPVAFGFGCEYFALFEEQGVGIQWKNLFSSPMEKDDYSLTTSIIIMYVDAFIYGVMTWYIEAVFPGQYGIPRPWYFPFTKSYW-FGEGDQRPTPILKGRKANS--GAVCIEEEPTHLDMGVYIENLVKVYRHGKKLAVDDLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIMGKDIRSELSAIRQSLGVCPQHNVLFSMLTVEEHVWFYARLKGLSEEEVKAEIDQILYDTGLPHKRKSRTCELSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKYRT-GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKKEPEASLSSCRNSSSTVSYVKKDDEASESSSDAGLGSDHESDAATAIDISLISGLIIKHVPNARMVEDLGHEITYILPYESAKDGAFVELFHDMDDHLADLGISSYGVSDTTLEEIFLKVAEDSGVDTEILSDGTFPIRR--RRRHAFGADHQSCLKPLTEDDRYDGNESEV----DPESRETDYLSGSDGKGSYQIQGWSLKRQQFLALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLALQPWMY------EDQVTFISDDAPEDASTQRLLAALMEGPG-FGTRCMEGE--PIPDAPCTIGDDD--WSIPEVPESVLEVLMSQNWTMDNPSPACECSSDGKKKMLPECPASAGGLPPPQIKI-SERDTLQNLTGRNISDYLVKTYAQIIGKSLKNKVWVNEFRYGGFSLGARST-----QVL---PPAEEIDDAIARVRVIFNLEKVTADRFLKSLSAF--INGLDTKNNVKIWFNNKGWHSIGAFLNVMNNGILRANLPPEKDPSK---YGITAFNHPLNLTKEQLSQVALVTTSVDVLVSICVIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPFLYWLANFIWDMCNYVVPATLVILIFVCFQQKAYVSATNLPVLALLLLLYGWSITPLMYPASFLFEIPSTAYVVLTSVNILIGINGSVSTFVLELFGNN--EIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAM-ADALERFGENRFRSPFEWDMVGKNLFAMAVEGVVFFIITVLIQYRFFFK------PNAKLSPI---GEEDEDVARERQRIVSGAGQGDILELRELTKVY--------------------KRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTTTF 1851 HSP 2 Score: 194.126 bits (492), Expect = 5.167e-49 Identity = 105/320 (32.81%), Postives = 174/320 (54.37%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 + + L K+Y + P ++ L + + LG NGAGKTTT +LTG +SG A++ + I E+D + Q +G CPQ++ + D LT +H+ FY +L+ + + E+ V I+ + L + + + SGG RKLS AMA IG VVFLDEPT G+DP ARR +W+ + R+++LT+H M+E + L R+AI+ G+ +C GS+ LK +FG+GY + + + + ++KF++ + + + E+ R LP + +F L +H + I Y +S T+L++VF+ A D Sbjct: 1807 LELRELTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTTTFKMLTGDTVVTSGEAFLARKSILREIDQVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEREVCEVAEWGIRKLGLVKYSDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRALWNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGY-----TIILRVAGPDPDLQPVMKFIESELPGSTLKEKHRNMLQYQLPS---SVSSLAHIFSILAKHKDFLRIEDYSVSQTTLDQVFVNFAKD 2118
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Cavefish
Match: abca4a (retinal-specific ATP-binding cassette transporter-like [Source:NCBI gene;Acc:103024609]) HSP 1 Score: 847.04 bits (2187), Expect = 0.000e+0 Identity = 570/1723 (33.08%), Postives = 896/1723 (52.00%), Query Frame = 1 Query: 670 MYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAV-----NTLFNITNVKSYIDGVSK--------------LFSWIERGL-------NCTELDRFIPLDSLKDIDKLTNQSF-----RNFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWV-----------------YNIKSSESIPLMRNNNQNCEINHQA--------------------------------------------FESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLK----------------------RKFG----------------EGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLN-QNPDQKQSKFLDQSD------------HLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMW-----SPASILDIP--------MVSPECDCSK----TGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSR-----------KLYGGFQF--VLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNL-NSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMI--LEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNY-FYNSNSIVKHEY--NALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 M+N L P + GK+ Y P+ IRQ+I+ AN TF+ L+ LR W L D+ +N+ ++ ++ + NP + D + NT I ++ +++ S+ +F+ +R L C LD+F+ L D +LT ++ + F A ++F +TF + T K + ++IR+ + ++ T K K DR+W P PR + D +YV GF +LQ+ ++ A I+ T E +G + MPYPCY+ D F+ L+ P +V+AW SV++++KS+V EKE RLKE +K MG+ N V W +WFI + +V+ +++ + K+ S+ ++F + + + I Q F+++VFF+KAN+A+ GILYF+FY+ + + ++ M L+SQVAF +++ +E+ G+Q+ N+ +P E F II+M++D+ +Y ++ WY+++VFPGQYG+ +P+ F SYW+ +I +S P NNQ + Q FE+EP L +G+ + NLVK++ + P ++ L++ FYE QITAFLGHNGAGKTTT+SILTG+F P+SGTA+I +DIRT+MD+IR +G+CPQ+N++F +TV +HI FY LLK E + + +++D L K N + +LSGG++RKLS+AMAF+G ++VVFLDEPT+GVDP++RR IWDLL+KYR RT+IL+THHMDEAD LSDRVAIISQG+L CCGS +FLK RK G E + + ++ + + E I V ++ +AR++E + T +LP R + LF+ L++ +A++ + S+G+SDTSLEE+FLKV D L + R T + +N + P+ K++ Q +KG L+ +Q +AL IKR+H+ R K F A+++LP +L ++F I + + +SPW+ + TF+ E + + + G G RCM L+ Y C N W +PA ++D+ SP+C CS T +C + +GG P RI ++ D L +LTG NISDYL+K +P L R + YGG LP G S K I D+ E+L N + H + L ++ F+ Y++ + + ++W N+KG+ +MPA+ N+ +N +LR+ L +A +YG++V N P+ + + L VN + ++ +A+ VIF +SF+PASFV++L++ERV+ +K QFVSG++P VYW +NFLWD++ Y + +++ IFI FD + Y N A I LL+ YG ++ P MYP S+ S PSTA+V L+ NL +G ++ TFILD+ + + L N +LK+V LIFP F LGRG++D+ N + + +Y + W+ G+ + + + ++I+ I+I+ R K + + ED DV ERER+ S D+L + +L+K Y + + AV+ +C GV GECFGLLGVNGAGKTTTF Sbjct: 386 MWNTLKPFLMGKILYAPDSPAIRQLIKNANSTFEELERLRNIIRSWE-EVGPQLWDFFQSNIQLDVLRDILR-----NPSVMDYMDRGLKNTGLTIRHILNFLHTGSEEERERDMVQFDWRNIFNLTDRTLRMINQYGECLVLDKFV---GLPDETQLTQKALDLIAEKKFWAGLVFVDTFSWTT-KIPPHIKFKIRMDIDTVERTNKIK--DRYWDPGPRADPMDDLRYVWGGFAYLQDMVEHAVIKTHTGKE-WPLGVYLQQMPYPCYVDDLFMLTLSRCFPIFIVLAWVYSVSMMVKSVVLEKEMRLKETLKAMGVTNEVLWCAWFIDSFLVMAASTALLTAIIMGGKVLNYSNPIILFIFLLTFTTATIMQCFLMTVFFNKANLAAACSGILYFSFYLPHLACFTWQDRITKDMKIMASLMSQVAFGFGTEYLSRYEEQGLGLQWDNIHTSPLEGDEFSFHTSIIMMLLDTVLYAVLAWYLDSVFPGQYGIGRPFYFPIQPSYWLNLTNPTKAVPEKSVVKRPSIDNSAQKPEETANNQTQPVEEQTTQPSEPPGTCKHGDRREKLGMQIKLEEEGSSYQNQSYLSGEKVFFEAEPSGLVVGVHVENLVKVFSGSSKPAVDGLSITFYEGQITAFLGHNGAGKTTTMSILTGLFPPTSGTAFIYGKDIRTDMDTIRHSLGMCPQHNIIFHHMTVAEHILFYSLLKGRPLAEAQQEVENMLEDFGLPHKRNEQTQNLSGGLQRKLSVAMAFVGGAKVVFLDEPTSGVDPYSRRSIWDLLLKYRP-GRTVILSTHHMDEADLLSDRVAIISQGRLHCCGSPLFLKSMLGAGFYLTLVRRMKDDTPPTRKEGQCDCKDDCSCKCSICTEYKESTCGQTKSAGRQMDGDVETITNLVHHHVPEARLVEAVGQELTFLLPSRGFKHRAYASLFRELEETLADIGLSSFGVSDTSLEEIFLKVTADGETSLGKSAADLRALQETSRSSVFR----DTTVTVNTEEPEDKKACANGQPTAGGSSSGEGQGSRQVKGVSLVVKQFLALLIKRFHHTTRSGKDFFAQIVLPASFVLVSLMFTLIVPPFGEYPSLTLSPWIYGRQF------TFFSNEQSEMEGMKYFADVLLNRPG-FGTRCMVDE--PLEEYPC--NNITTEWEKPLVNPA-LVDVLNKSQWTELRPSPDCQCSTPTKLTMLPVCPE-GAGGLPLPQRIQSTGDVLIDLTGRNISDYLVKTYPTLIRTSLKSKYWVNEQRYGGISVGGRLP-VVGLSPKTIQDTA--EQLGGIFNITAGKHVKRALRDTGTFLRYMETEYNV--------KVWYNNKGWHAMPAFLNVANNAILRAHLPTNA-NPSEYGVTVINHPLNLTKEQ--LSEVNVLTTSVDAVVAMCVIFAMSFVPASFVLYLIQERVTQAKHLQFVSGVSPLVYWTANFLWDMISYSVSAALVVQIFINFDKKCYTSPANLHALIALLMLYGWSVTPMMYPMSYVFSVPSTAYVSLSCLNLFIGINSSAITFILDLFDSS-TTLYMFNQVLKRVLLIFPHFCLGRGLIDMAINQAVMDVYAQFGEDYSLDPFSWNFVGKNVVCMAAEGFIYFILNILIQY----RFFLEHWMPDSKKPLIV--DEDLDVAKERERIYRGGSSSDILHIRDLSKTY--------------------SGGTKPAVDRICVGVSPGECFGLLGVNGAGKTTTF 2036 HSP 2 Score: 164.081 bits (414), Expect = 6.947e-40 Identity = 84/228 (36.84%), Postives = 128/228 (56.14%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGY 2895 + I +L K Y P ++ + + + LG NGAGKTTT +LTG SSG A I I T + + +G CPQ++ + D LT +H++ Y L+ + ++EI V I+ + L++ + SGG KRKLS A+A IG +V LDEPT G+DP +RR +W ++ R ++LT+H M+E + L R+AI+ G +C G++ LK KFG+GY Sbjct: 1992 LHIRDLSKTYSGGTKPAVDRICVGVSPGECFGLLGVNGAGKTTTFKMLTGDIDVSSGEAAITGYSILTNILDVYHNMGYCPQFDAIDDLLTGREHLHLYARLRGVPESEISRVAEWGIQKLGLSQYAGYGAGTYSGGNKRKLSTAIAMIGCPALVLLDEPTTGMDPHSRRFLWKSIMSVIQDGRAVVLTSHSMEECEALCTRLAIMVNGIFKCLGTIQHLKYKFGDGY 2219 HSP 3 Score: 53.9138 bits (128), Expect = 1.975e-6 Identity = 23/80 (28.75%), Postives = 42/80 (52.50%), Query Frame = 1 Query: 25 NQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQ 264 +Q+R LLWKN+ +++R+ +E+ P+++ L +R + Y+ C F K M S G +P++ C N C+ Sbjct: 5 SQVRLLLWKNWTVRKRQKMRFFMEIMWPVMLFIGLVWLRKANPLYRQHECHFPNKAMPSAGVLPWIQGIFCNANNPCFQH 84
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Cavefish
Match: abca4a (retinal-specific ATP-binding cassette transporter-like [Source:NCBI gene;Acc:103024609]) HSP 1 Score: 846.655 bits (2186), Expect = 0.000e+0 Identity = 569/1710 (33.27%), Postives = 888/1710 (51.93%), Query Frame = 1 Query: 670 MYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAV-----NTLFNITNVKSYIDGVSK--------------LFSWIERGL-------NCTELDRFIPLDSLKDIDKLTNQSF-----RNFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWV-----------------YNIKSSESIPLMRNNNQNCEINHQA--------------------------------------------FESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLK----------------------RKFG----------------EGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMW-----SPASILDIP--------MVSPECDCSK----TGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSR-----------KLYGGFQF--VLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNL-NSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMI--LEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNY-FYNSNSIVKHEY--NALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 M+N L P + GK+ Y P+ IRQ+I+ AN TF+ L+ LR W L D+ +N+ ++ ++ + NP + D + NT I ++ +++ S+ +F+ +R L C LD+F+ L D +LT ++ + F A ++F +TF + T K + ++IR+ + ++ T K K DR+W P PR + D +YV GF +LQ+ ++ A I+ T E +G + MPYPCY+ D F+ L+ P +V+AW SV++++KS+V EKE RLKE +K MG+ N V W +WFI + +V+ +++ + K+ S+ ++F + + + I Q F+++VFF+KAN+A+ GILYF+FY+ + + ++ M L+SQVAF +++ +E+ G+Q+ N+ +P E F II+M++D+ +Y ++ WY+++VFPGQYG+ +P+ F SYW+ +I +S P NNQ + Q FE+EP L +G+ + NLVK++ + P ++ L++ FYE QITAFLGHNGAGKTTT+SILTG+F P+SGTA+I +DIRT+MD+IR +G+CPQ+N++F +TV +HI FY LLK E + + +++D L K N + +LSGG++RKLS+AMAF+G ++VVFLDEPT+GVDP++RR IWDLL+KYR RT+IL+THHMDEAD LSDRVAIISQG+L CCGS +FLK RK G E + + ++ + + E I V ++ +AR++E + T +LP R + LF+ L++ +A++ + S+G+SDTSLEE+FLKV D L A K Q S Q +KG L+ +Q +AL IKR+H+ R K F A+++LP +L ++F I + + +SPW+ + TF+ E + + + G G RCM L+ Y C N W +PA ++D+ SP+C CS T +C + +GG P RI ++ D L +LTG NISDYL+K +P L R + YGG LP G S K I D+ E+L N + H + L ++ F+ Y++ + + ++W N+KG+ +MPA+ N+ +N +LR+ L +A +YG++V N P+ + + L VN + ++ +A+ VIF +SF+PASFV++L++ERV+ +K QFVSG++P VYW +NFLWD++ Y + +++ IFI FD + Y N A I LL+ YG ++ P MYP S+ S PSTA+V L+ NL +G ++ TFILD+ + + L N +LK+V LIFP F LGRG++D+ N + + +Y + W+ G+ + + + ++I+ I+I+ R K + + ED DV ERER+ S D+L + +L+K Y + + AV+ +C GV GECFGLLGVNGAGKTTTF Sbjct: 386 MWNTLKPFLMGKILYAPDSPAIRQLIKNANSTFEELERLRNIIRSWE-EVGPQLWDFFQSNIQLDVLRDILR-----NPSVMDYMDRGLKNTGLTIRHILNFLHTGSEEERERDMVQFDWRNIFNLTDRTLRMINQYGECLVLDKFV---GLPDETQLTQKALDLIAEKKFWAGLVFVDTFSWTT-KIPPHIKFKIRMDIDTVERTNKIK--DRYWDPGPRADPMDDLRYVWGGFAYLQDMVEHAVIKTHTGKE-WPLGVYLQQMPYPCYVDDLFMLTLSRCFPIFIVLAWVYSVSMMVKSVVLEKEMRLKETLKAMGVTNEVLWCAWFIDSFLVMAASTALLTAIIMGGKVLNYSNPIILFIFLLTFTTATIMQCFLMTVFFNKANLAAACSGILYFSFYLPHLACFTWQDRITKDMKIMASLMSQVAFGFGTEYLSRYEEQGLGLQWDNIHTSPLEGDEFSFHTSIIMMLLDTVLYAVLAWYLDSVFPGQYGIGRPFYFPIQPSYWLNLTNPTKAVPEKSVVKRPSIDNSAQKPEETANNQTQPVEEQTTQPSEPPGTCKHGDRREKLGMQIKLEEEGSSYQNQSYLSGEKVFFEAEPSGLVVGVHVENLVKVFSGSSKPAVDGLSITFYEGQITAFLGHNGAGKTTTMSILTGLFPPTSGTAFIYGKDIRTDMDTIRHSLGMCPQHNIIFHHMTVAEHILFYSLLKGRPLAEAQQEVENMLEDFGLPHKRNEQTQNLSGGLQRKLSVAMAFVGGAKVVFLDEPTSGVDPYSRRSIWDLLLKYRP-GRTVILSTHHMDEADLLSDRVAIISQGRLHCCGSPLFLKSMLGAGFYLTLVRRMKDDTPPTRKEGQCDCKDDCSCKCSICTEYKESTCGQTKSAGRQMDGDVETITNLVHHHVPEARLVEAVGQELTFLLPSRGFKHRAYASLFRELEETLADIGLSSFGVSDTSLEEIFLKVTADGETSLGKSA------------------ADKKACANGQPTAGGSSSGEGQGSRQVKGVSLVVKQFLALLIKRFHHTTRSGKDFFAQIVLPASFVLVSLMFTLIVPPFGEYPSLTLSPWIYGRQF------TFFSNEQSEMEGMKYFADVLLNRPG-FGTRCMVDE--PLEEYPC--NNITTEWEKPLVNPA-LVDVLNKSQWTELRPSPDCQCSTPTKLTMLPVCPE-GAGGLPLPQRIQSTGDVLIDLTGRNISDYLVKTYPTLIRTSLKSKYWVNEQRYGGISVGGRLP-VVGLSPKTIQDTA--EQLGGIFNITAGKHVKRALRDTGTFLRYMETEYNV--------KVWYNNKGWHAMPAFLNVANNAILRAHLPTNA-NPSEYGVTVINHPLNLTKEQ--LSEVNVLTTSVDAVVAMCVIFAMSFVPASFVLYLIQERVTQAKHLQFVSGVSPLVYWTANFLWDMISYSVSAALVVQIFINFDKKCYTSPANLHALIALLMLYGWSVTPMMYPMSYVFSVPSTAYVSLSCLNLFIGINSSAITFILDLFDSS-TTLYMFNQVLKRVLLIFPHFCLGRGLIDMAINQAVMDVYAQFGEDYSLDPFSWNFVGKNVVCMAAEGFIYFILNILIQY----RFFLEHWMPDSKKPLIV--DEDLDVAKERERIYRGGSSSDILHIRDLSKTY--------------------SGGTKPAVDRICVGVSPGECFGLLGVNGAGKTTTF 2009 HSP 2 Score: 164.081 bits (414), Expect = 6.191e-40 Identity = 84/228 (36.84%), Postives = 128/228 (56.14%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGY 2895 + I +L K Y P ++ + + + LG NGAGKTTT +LTG SSG A I I T + + +G CPQ++ + D LT +H++ Y L+ + ++EI V I+ + L++ + SGG KRKLS A+A IG +V LDEPT G+DP +RR +W ++ R ++LT+H M+E + L R+AI+ G +C G++ LK KFG+GY Sbjct: 1965 LHIRDLSKTYSGGTKPAVDRICVGVSPGECFGLLGVNGAGKTTTFKMLTGDIDVSSGEAAITGYSILTNILDVYHNMGYCPQFDAIDDLLTGREHLHLYARLRGVPESEISRVAEWGIQKLGLSQYAGYGAGTYSGGNKRKLSTAIAMIGCPALVLLDEPTTGMDPHSRRFLWKSIMSVIQDGRAVVLTSHSMEECEALCTRLAIMVNGIFKCLGTIQHLKYKFGDGY 2192 HSP 3 Score: 53.9138 bits (128), Expect = 2.023e-6 Identity = 23/80 (28.75%), Postives = 42/80 (52.50%), Query Frame = 1 Query: 25 NQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQ 264 +Q+R LLWKN+ +++R+ +E+ P+++ L +R + Y+ C F K M S G +P++ C N C+ Sbjct: 5 SQVRLLLWKNWTVRKRQKMRFFMEIMWPVMLFIGLVWLRKANPLYRQHECHFPNKAMPSAGVLPWIQGIFCNANNPCFQH 84
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Cavefish
Match: zgc:172302 (zgc:172302 [Source:ZFIN;Acc:ZDB-GENE-081205-5]) HSP 1 Score: 843.958 bits (2179), Expect = 0.000e+0 Identity = 580/1728 (33.56%), Postives = 917/1728 (53.07%), Query Frame = 1 Query: 478 VMSENETTI-ESGYNELGEIICGSPENDFKLF----------MRNFIKNQRRKRSLLT-------CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIE------RGLNCTELDRFIPLDS-------------------LKDIDKLTNQSF-----RNFLAVIIF---NETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMP----YPCYL--IDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSS----ESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXIL---------------------------KFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHL---------LKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSI---YRLDNYQCFYRNENNMWSPASILDIPMVSPECDCSKTGNQI----CNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRK-----------LYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSL-KFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSI----VKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 ++ EN + + + + I+CG PE D + +++F+ R + + L C+ + Q+ N + + + + PL GK+ Y P+ R+I+++ N TF+ LD L W + ++ N++ I +K F + P++ VN + N +++ S + +G T LD + L+S L D++ ++ R F A I+F + + L P + Y+IR+ + + T + K D+FW P P + F+D +Y+ GF+++Q+ +++A +++ G + + P + C++ FL+ L LP L +AW SV ++IK +VYEKE+RLKE M++MGL++ W+SWF+S+ ++ +I +++ L++ I S AVVF + + + I F++S FFS+AN+A+ G + YF+ Y+ +V+ + L+ LS VAF +++ +E+ G+Q+SN++ +P E + + II++ +D+FIY + TWY+EAVFPGQYG+ +PW F+ YW + + P+ +N+ E+EP +L LG++IHNLVK+Y +N+L++ F+E QIT+FLGHNGAGKTTT+SILTG+F P++G+ YI DIRT+M+ IR+ +G+CPQ+NVLFD LTVE+H++FYG +K M +E++ + +++DV LT K + + +LSGGM+RKLS+A+AFIG S+VV LDEPTAGVDP++RRGIWDLL+KYR DRTIIL+TH+MDEAD L DR+AIISQGKL CCGS +FLK G GYYL+ +K + +L + Y++ AR++E+ + I LP LD+ AE IISYGLSDT+LEE+FLKVA++ E AT + +Q + + + D++D L L G+ L QQ+ AL KR YA R KGF+A+++LP L IL +LF I K +++ PW+ + TF+ + + L S G G +C+ + ++ Q + SP ++ P SP+C CS + C + G PP + +T D L NLTG NISDYL+K +P++ +K YGGF S LIG +L + V A + + + +SL + +D L F + + ++W N+KG+ +M ++ NI +N LLR+ L + +GI+ N P+ + + ++ +++ L+I VIF +S +PASFV+FL+EERVS +K QFVSG+ P +YW +NF+WD++ Y +P ++++IFI F Q+Y+ KN A +LLL+ YG AI P MYP SF S PSTA+V L + NL +G +I+TF+L++ E+L+E+N ILKKVFLIFP F LGRG++D+ N ++++ K L+WD G+ LF++ + ++I I+++ R + + ED DV ER+R+ + + DD+L +I+L+K+Y ++ AVN LC G+ GECFGLLGVNGAGKT+TF Sbjct: 249 LLQENSSALPQKRFQAFSRIMCGHPEQDGESIPSFNWYEDQDIKSFLGRSRSEETDLENDTTSPFCKSMIQNLEMNPVSRI-FWRGIKPLFIGKILYAPDTPATRRIMKEVNRTFQTLDVLEEVYGAWE-EVGPRIKRFMENSLEIRLLKDFLR-----RPEVAVVVN--LRLENTSWTASRLAQFLSTPDPDTPRRKGAPPTWLDLYQDLNSSLSTLSQVTKCFSQNKMEGLDTEDEMVERALELLEDRQFWAGIVFLLPDPSSSNLPPH----VKYKIRMDVDDVTRTNEIK--DKFWDPGPAADPFSDMRYIRGGFVYVQDLVERAITQVL--------GVFIKVTPENKFFFCWVSFPFSFLRVLNRSLPLFLTLAWTYSVAMIIKCVVYEKEARLKETMRIMGLSSGTLWLSWFVSSYLIFLISSLLLVTVLKVGDILPYSDPAVVFFFLSAFATATIMLCFLISTFFSRANLAAACGDLAYFSLYLPYVLCVSWREYLTSVHRILASFLSPVAFGFGCEYLSQYEEQGLGIQWSNMWSSPTEGDKYSLSTSIIMLYVDAFIYGVATWYIEAVFPGQYGIPRPWYFVFQLKYWGGALMEAGLPIPPAPIDEGDNR--------IEAEPSDLILGVAIHNLVKIYKKGAKLAVNHLSVKFFEGQITSFLGHNGAGKTTTLSILTGLFPPTAGSVYIKGMDIRTDMNEIRRTLGVCPQHNVLFDMLTVEEHVWFYGHMKGMSSSEVKEEMASLLEDVGLTHKRHEQTKNLSGGMQRKLSVAIAFIGGSKVVILDEPTAGVDPYSRRGIWDLLLKYR-KDRTIILSTHYMDEADLLGDRIAIISQGKLCCCGSSLFLKSHLGTGYYLTAVKKELQSRTPTSASGKLLAADTDSTRSDDTGLGSEVNSSVISGLVALAQHYVSGARLVEDVGREVVINLPHAASEDGTLALFLAELDKRQAEFGIISYGLSDTTLEEIFLKVAEETGVDAEPDEA-----------------ATPPAVSPSQQGEPPEDR--DETDPLSGDGRGSVSLTGWGLTWQQLRALFTKRLLYATRSRKGFIAQIVLPALFILIDLLFSLIVPPMGKYPALELQPWMYGEQF------TFFSNDAPQDPAMQNLLSALLDPPG-FGTKCLCTGENVGTKFNSPQIPFSTWKLFNSPNWTMEHP--SPDCMCSTEEVRRMLPDCPEGAGGLPPPQIKRLT-GDILQNLTGRNISDYLMKTYPQILKKSMKTKKWVNEFRYGGFSLGAKG----SQTLIGSL----QLEESVMAIRKQYKIAENSSLDQLLDRLPDLFTDLNSQNN-VKVWYNNKGWHAMVSFVNIMNNGLLRASLPPGPER-QKHGITAYNHPLNLTKEQLSDMVLMTTSVDVLLSISVIFAMSLVPASFVLFLIEERVSKAKHLQFVSGVKPILYWTANFVWDMLNYTVPATLVVLIFIGFQQQAYVSEKNLPALVLLLLLYGWAITPLMYPASFVFSVPSTAYVTLTSINLFIGINGSIATFVLELF--TNEHLREVNRILKKVFLIFPHFCLGRGLIDMAKNQAM-ADALQRLGTKQTLEPLEWDFVGKNLFAMAVEGVVFFIFTILLQYKFFIRCRLPWFE----PVLPPLCAEDEDVGRERDRVKNGRTQDDILTLIDLSKVY--------------------KSGKKPAVNRLCLGIPRGECFGLLGVNGAGKTSTF 1878 HSP 2 Score: 189.504 bits (480), Expect = 1.309e-47 Identity = 109/320 (34.06%), Postives = 173/320 (54.06%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 +++ +L K+Y S K P +N L L + LG NGAGKT+T +LTG S + G A++ N + TEMD + Q +G CPQ++ + + LT +H+ FY L+ + + + V +K + LT + + SGG KRKLS A++ IG V+FLDEPT G+DP A+R +W+ + R +ILT+H M+E + L R+AI+ G+ QC GS+ LK +FG+GY + L + + F I + + + LQ+ LP NS +F L + E+ + Y +S T+L++VF+ A + Sbjct: 1834 LTLIDLSKVYKSGKKPAVNRLCLGIPRGECFGLLGVNGAGKTSTFLMLTGDTSVTCGEAFLCNHSVLTEMDRVHQLMGYCPQFDAINELLTGREHLEFYARLRGVPEAYVAKVAQWGVKKLGLTHYADREAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCIHSVIKEGRAVILTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLSAPPKDPCPVDAYIKNSFTGIVLKE---RHHNVLQYQ--LPS---NSCSLARVFDVLSNNYEELGVTDYSISQTTLDQVFVNFAKE 2145 HSP 3 Score: 62.7734 bits (151), Expect = 4.106e-9 Identity = 31/80 (38.75%), Postives = 42/80 (52.50%), Query Frame = 1 Query: 19 ISNQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY 258 I QL LLWKNF +RR L+ EL PL + IL +VR+S YK C F K + S G + ++ +C N C+ Sbjct: 3 IGTQLYLLLWKNFTYRRRNKFQLITELLWPLFLFLILISVRNSHPPYKQSQCHFPNKALPSAGTLAWVQGIVCNVNNPCF 82
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Cavefish
Match: zgc:172302 (zgc:172302 [Source:ZFIN;Acc:ZDB-GENE-081205-5]) HSP 1 Score: 840.877 bits (2171), Expect = 0.000e+0 Identity = 574/1682 (34.13%), Postives = 906/1682 (53.86%), Query Frame = 1 Query: 478 VMSENETTI-ESGYNELGEIICGSPENDFKLF----------MRNFIKNQRRKRSLLT-------CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWR---LHFQTFL------------LDYISNN--VFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSFRNFLAVIIF---NETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMP----YPCYL--IDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXX-XILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHL---------LKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWSPASILDIPMVSPECDCSKTGNQI----CNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRK-----------LYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSL-KFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVK----HEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 ++ EN + + + + I+CG PE D + +++F+ R + + L C+ + Q+ N + + + + PL GK+ Y P+ R+I+++ N TF+ LD L W + F+ D++ F++ A P D L + + S + V L + +E GL+ + L+ L+D R F A I+F + + L P + Y+IR+ + + T + K D+FW P P + F+D +Y+ GF+++Q+ +++A +++ G + + P + C++ FL+ L LP L +AW SV ++IK +VYEKE+RLKE M++MGL++ W+SWF+S+ ++ +I +++ L++ I S AVVF + + + I F++S FFS+AN+A+ G + YF+ Y+ +V+ + L+ LS VAF +++ +E+ G+Q+SN++ +P E + + II++ +D+FIY + TWY+EAVFPGQYG+ +PW F+ YW + ++ I E+EP +L LG++IHNLVK+Y +N+L++ F+E QIT+FLGHNGAGKTTT+SILTG+F P++G+ YI DIRT+M+ IR+ +G+CPQ+NVLFD LTVE+H++FYG +K M +E++ + +++DV LT K + + +LSGGM+RKLS+A+AFIG S+VV LDEPTAGVDP++RRGIWDLL+KYR DRTIIL+TH+MDEAD L DR+AIISQGKL CCGS +FLK G GYYL+ +K + ++ + Y++ AR++E+ + I LP LD+ AE IISYGLSDT+LEE+FLKVA++ E + + + + NQ ++ ++D L L G+ L QQ+ AL KR YA R KGF+A+++LP L IL +LF I K +++ PW+ + TF+ + + L S G G +C+ ++ Q + SP ++ P SP+C CS + C + G PP + +T D L NLTG NISDYL+K +P++ +K YGGF S LIG +L + V A + + + +SL + +D L F + + ++W N+KG+ +M ++ NI +N LLR+ L + +GI+ N P+ + + ++ +++ L+I VIF +S +PASFV+FL+EERVS +K QFVSG+ P +YW +NF+WD++ Y +P ++++IFI F Q+Y+ KN A +LLL+ YG AI P MYP SF S PSTA+V L + NL +G +I+TF+L++ E+L+E+N ILKKVFLIFP F LGRG++D+ N ++++ + H + + WD G+ LF++ + ++I I+++ R + + ED DV ER+R+ + + DD+L +I+L+K+Y ++ AVN LC G+ GECFGLLGVNGAGKT+TF Sbjct: 225 LLQENSSALPQKRFQAFSRIMCGHPEQDGESIPSFNWYEDQDIKSFLGRSRSEETDLENDTTSPFCKSMIQNLEMNPVSRI-FWRGIKPLFIGKILYAPDTPATRRIMKEVNRTFQTLDVLEEVYGAWEEVGPRIKRFMENKNICFLFSVHQDFLRRPEVAFLSTPDPDTPRRKGAPPTWLDLYQDLNSSLSTLSQVTKVPFLINKME-GLDTEDEMVERALELLED---------RQFWAGIVFLLPDPSSSNLPPH----VKYKIRMDVDDVTRTNEIK--DKFWDPGPAADPFSDMRYIRGGFVYVQDLVERAITQVL--------GVFIKVTPENKFFFCWVSFPFSFLRVLNRSLPLFLTLAWTYSVAMIIKCVVYEKEARLKETMRIMGLSSGTLWLSWFVSSYLIFLISSLLLVTVLKVGDILPYSDPAVVFFFLSAFATATIMLCFLISTFFSRANLAAACGDLAYFSLYLPYVLCVSWREYLTSVHRILASFLSPVAFGFGCEYLSQYEEQGLGIQWSNMWSSPTEGDKYSLSTSIIMLYVDAFIYGVATWYIEAVFPGQYGIPRPWYFVFQLKYWGGALMEADRI-----------------EAEPSDLILGVAIHNLVKIYKKGAKLAVNHLSVKFFEGQITSFLGHNGAGKTTTLSILTGLFPPTAGSVYIKGMDIRTDMNEIRRTLGVCPQHNVLFDMLTVEEHVWFYGHMKGMSSSEVKEEMASLLEDVGLTHKRHEQTKNLSGGMQRKLSVAIAFIGGSKVVILDEPTAGVDPYSRRGIWDLLLKYRK-DRTIILSTHYMDEADLLGDRIAIISQGKLCCCGSSLFLKSHLGTGYYLTAVKKELQSRTPTSASGNGLVALAQHYVSGARLVEDVGREVVINLPHAASEDGTLALFLAELDKRQAEFGIISYGLSDTTLEEIFLKVAEETGVDAEPDEAATPPAVSP--SQQGEPPEDRDAVLFNQQVSLLYTE-AQETDPLSGDGRGSVSLTGWGLTWQQLRALFTKRLLYATRSRKGFIAQIVLPALFILIDLLFSLIVPPMGKYPALELQPWMYGEQF------TFFSNDAPQDPAMQNLLSALLDPPG-FGTKCL------FNSPQIPFSTWKLFNSPNWTMEHP--SPDCMCSTEEVRRMLPDCPEGAGGLPPPQIKRLT-GDILQNLTGRNISDYLMKTYPQILKKSMKTKKWVNEFRYGGFSLGAKG----SQTLIGSL----QLEESVMAIRKQYKIAENSSLDQLLDRLPDLFTDLNSQNN-VKVWYNNKGWHAMVSFVNIMNNGLLRASLPPGPER-QKHGITAYNHPLNLTKEQLSDMVLMTTSVDVLLSISVIFAMSLVPASFVLFLIEERVSKAKHLQFVSGVKPILYWTANFVWDMLNYTVPATLVVLIFIGFQQQAYVSEKNLPALVLLLLLYGWAITPLMYPASFVFSVPSTAYVTLTSINLFIGINGSIATFVLELF--TNEHLREVNRILKKVFLIFPHFCLGRGLIDMAKNQAM-ADALQRLGKCHMPSPIVWDFVGKNLFAMAVEGVVFFIFTILLQYKFFIRCRLPWFE----PVLPPLCAEDEDVGRERDRVKNGRTQDDILTLIDLSKVY--------------------KSGKKPAVNRLCLGIPRGECFGLLGVNGAGKTSTF 1807 HSP 2 Score: 186.422 bits (472), Expect = 9.990e-47 Identity = 107/313 (34.19%), Postives = 169/313 (53.99%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEV 3150 +++ +L K+Y S K P +N L L + LG NGAGKT+T +LTG S + G A++ N + TEMD + Q +G CPQ++ + + LT +H+ FY L+ + + + V +K + LT + + SGG KRKLS A++ IG V+FLDEPT G+DP A+R +W+ + R +ILT+H M+E + L R+AI+ G+ QC GS+ LK +FG+GY + L + + F I + + + LQ+ LP NS +F L + E+ + Y +S T+L++V Sbjct: 1763 LTLIDLSKVYKSGKKPAVNRLCLGIPRGECFGLLGVNGAGKTSTFLMLTGDTSVTCGEAFLCNHSVLTEMDRVHQLMGYCPQFDAINELLTGREHLEFYARLRGVPEAYVAKVAQWGVKKLGLTHYADREAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCIHSVIKEGRAVILTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLSAPPKDPCPVDAYIKNSFTGIVLKE---RHHNVLQYQ--LPS---NSCSLARVFDVLSNNYEELGVTDYSISQTTLDQV 2067 HSP 3 Score: 62.7734 bits (151), Expect = 4.052e-9 Identity = 31/80 (38.75%), Postives = 42/80 (52.50%), Query Frame = 1 Query: 19 ISNQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY 258 I QL LLWKNF +RR L+ EL PL + IL +VR+S YK C F K + S G + ++ +C N C+ Sbjct: 3 IGTQLYLLLWKNFTYRRRNKFQLITELLWPLFLFLILISVRNSHPPYKQSQCHFPNKALPSAGTLAWVQGIVCNVNNPCF 82
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002495.1 (pep scaffold:Pmarinus_7.0:GL480265:53:27909:1 gene:ENSPMAG00000002218.1 transcript:ENSPMAT00000002495.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 680.248 bits (1754), Expect = 0.000e+0 Identity = 414/1114 (37.16%), Postives = 640/1114 (57.45%), Query Frame = 1 Query: 1150 LSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLR----LSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSE---SIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXX--------------------------XXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNK-------LINKEKSYYSYYCNILKMKLRIN-ATKTEIFLNQNPDQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWL------MMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWSPASI------------LDIPMVSPECDCSKTGNQI----CNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSS---KLIGDSPFWEELR-DFVNASQANHNQSNLNSLKFIDYLQKTFK----IYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQ 4278 + Y+IR+ + + T K K DR+W P PR + F D +Y+ GF +LQ++++Q I TN S+ VG + MPYPCY+ D FL+ + LP L +AW SV +++K +V+EKE+RLKE M++MGL+ + W+SWFIS ++ L+I ++++V L+ L I S +V+ + + I+ + Q F++S FFS+AN+A+ +GGI+YF+FY+ +V+ + + +++ ++ S + S VAFS +F +E+ G+Q+ N+F +P E + I +M+ D+F+Y L+T Y+E VFPGQYGV KPW F C R+YW + E +I + ++ E EP +L +G+SI LVK+Y + K ++ L+LNFY+ QIT+FLGHNGAGKTTT+SILTG+F P++GTAYIL DIRT++D IR+ +G+CPQYNVLFD LTVE+HI+FY LK + E + + ++I+DVDL K + +S LSGGM+RKLSI +AF+G S+VVFLDEPTAGVDP+ARRGIW+LL+KYR H RTIIL+THHMDEAD L DR+AIIS G+L+CCGS +FLK FG GYYL+++K + S + + ++ + ++ ++ DAR++E + T +LP + F LFK LD+ +AE+ + SYG+SDT+LEE+FLKVA++P ++ S Y+Y + + N +T + +K ++ + + G L+ Q AL IKR+H+A+R KGF+A++ILP + + ++F I K +Q+ PW+ +S EN+ T ++ L+NK G RCMN + + C + P S ++ P SPEC CS G ++ C + +GGPP R+ ++D L +L+G NISDYL+K +P+ RK +V +G S K + S +++ F N + H ++ K +D L K G K + ++W N+KG+ ++ A+ N+ +N + + DYGI+ N P+ + + Sbjct: 5 VRYKIRMDIDSVQRTNKIK--DRYWDPGPRADPFDDLRYIWGGFAYLQDSVEQGIIRAQTNG-SLSVGVYVQQMPYPCYVDDIFLRIMNRSLPMFLTLAWMYSVAMILKEVVHEKEARLKETMRIMGLSTSMLWLSWFISILIPLLISAMLLTVLLKVREQLGNILYYSDPTIVYLYLCVFAIATVMQCFLISTFFSRANLAAATGGIVYFSFYLPYVLCVAWQNQITYSVKISTSIFSTVAFSFGSEFFSLYEEQGVGMQWENVFSSPVEGEDYTFISSIFMMLFDAFVYGLLTVYIENVFPGQYGVPKPWYFPCTRAYWRGDTMEKELYETIAQKQPQAITGVPDNIYVEDEPGDLPVGVSIQGLVKIYNAGKKLAVDGLSLNFYQGQITSFLGHNGAGKTTTMSILTGLFPPTAGTAYILGRDIRTDIDKIRKNLGVCPQYNVLFDRLTVEEHIWFYARLKGRSEQEAKQEIEQMIQDVDLAHKRSDISKSLSGGMQRKLSIGIAFVGGSKVVFLDEPTAGVDPYARRGIWNLLLKYR-HGRTIILSTHHMDEADLLGDRIAIISHGRLRCCGSSLFLKNAFGAGYYLTMVKRSGSGGSNSSCLAGLASSSDEGFGSDESNPDSIAANHVSSVTRLLQQHVPDARLIENFGQELTYLLPSHGAKDGTFALLFKELDEKLAELGVSSYGVSDTTLEEIFLKVAEEPAANSHFTNGVKLSARNSKYTYLQPVHAGCICKNYSTCKKAPAELGELEKLNELDGKGTQQISGVQLILLQFKALFIKRFHHARRSRKGFVAQIILPAVFVCLALVFSLIIPPFGKYPMLQLQPWMYGEQYTFLSNDAPENVKT----NSLYDALLNK---------PGFGTRCMNGE--SIPDAACVETKSEWVQPPMSPAMARTMQSRNWSMEDP--SPECRCSGEGRRVILPDCPE-GAGGPPPMQRVQNTTDTLEDLSGRNISDYLVKTYPQAIRKSLKHKYWVNEIRYGGLSVGKKKLSHSASPKDMDIVFTNVKRVFHIEN-----KAVDVLYSGVKDMVSFLGPKETI-KVWFNNKGWHAIVAFMNM-ANNAVLRSSLPAGTDPSDYGITAYNHPLNLTK 1089
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Sea Lamprey
Match: abca12 (ATP-binding cassette, sub-family A (ABC1), member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9790]) HSP 1 Score: 363.229 bits (931), Expect = 3.266e-102 Identity = 270/858 (31.47%), Postives = 435/858 (50.70%), Query Frame = 1 Query: 1141 TTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSL---TMYYSCGLLSQVAFSNAVKFMIYWEQ---LYEGVQFSNLFQNP--GESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCAR-SYWVYNI----KSSESIPLMRNNNQN-------CEIN----------HQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMD--KNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXX---------XXILKFVKIYIADARMM--EESR----LQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFL---KVADDP---------------MNKLINKEKSYYS--YYCNILKMKLRINATKTEIFLNQNPDQKQ------------------------SKFLDQSDHLLK-----GFPLLQQQIIALHIKRYHYAKRDFKGFLAE 3426 T L+Y +R+ + + T + D W P P N ++ Y F+ + +++A I L E + MPYPCY D FL + + P L ++AW ++ +K +V EKE +EYM +MG+ H++SW + + V+L++ V++++V L+ S + A++ A+ + IS + +M+S F+ NVAS++ +Y + F+ L +L+ ++ C LLS AFS A + + VQ+SN++ +P G+ + F + ++IID+ IY ++ WY+ V+PG YG+A+P+ FL R S + I S I +++ + C E+ P +L G+S+ +L K Y K + +L+L+FY+ QIT LGHNGAGKTTT+S+L G++ PSSG+ ++ D RT+M +R+++G+C Q +VLF +L V +H+ YG LK +D + ++ + + D+ L + L LSGGMKRKLSIA+AFIG S V LDEPT+GVDP +RR IW+L++K+R+ RTIIL+THH+DEA+ LSDR+A++ GKL+CCGS +LK +G+G L+L K S E ++ V+ +A A + E+S +LP + N + L L+++M E+ + Y +SDT+LEEV L +V +P L+ K Y C+ L + K N++P+ + S HL+K G LL ++ AL KR+H+ +RD KG A+ Sbjct: 2 ATHLNYTLRLSIQNVMRTDYLR--DLVWVPGPHTNQ--NYMYYTHAFLS-RTMLERAAISLYIGRNISEPALQVQPMPYPCYTDDSFLHSVGLMFPILFMIAWILTIASTVKFLVQEKELCQQEYMNIMGVRPASHFLSWLLQSCVLLLLMVILLTVILKASGTLPSINWALLLALFLCFGISVLAMGYMLSACFTHTNVASLTACFIYLLSFFPFLALSSLTLKLTRWQKSLIVRC-LLSPTAFSYATNLITQHCTCIPMRALVQWSNMYHSPLFGDDVSFA--YLCWMLIIDTAIYFILGWYIRNVYPGTYGLARPFYFLFTRISSKAHGIPGQKHGSRVIRGLQDGRKGVLRGVTECSCTSPLGAPDGSMRPQLEAVPADLTAGVSLRSLTKQYSKGKKAALQDLSLDFYQDQITTLLGHNGAGKTTTMSLLMGLYEPSSGSVHVGGHDARTDMAEVRRQLGVCLQRDVLFPALNVHEHLLLYGRLKALDWSRQRLQQEVDTFLNDLGLYNHKDKLVGTLSGGMKRKLSIAIAFIGGSTTVILDEPTSGVDPCSRRSIWNLILKHRA-GRTIILSTHHLDEAEVLSDRIAVLEHGKLRCCGSPQYLKEIYGQGLTLTLTKKVRVLCLSQSVTLGSRPPFDPERVVSLVRSGVAGAALKSGEDSSGNRNADMVFLLPAHSQNVLGQSFLV-TLEENMEELGLSGYAISDTTLEEVCLRQQRVMSEPALGCSASARYFTPTSAASLLTKATQCGPGLYSCSQLVQEAEDQRLKD--ITNKSPEAESGSINSETAAPPDHTSPAASSILCLSSLWRTEKHLVKKERVTGIHLLVRKTQALIYKRFHHWRRDVKGAAAQ 847 HSP 2 Score: 180.259 bits (456), Expect = 1.547e-45 Identity = 148/495 (29.90%), Postives = 238/495 (48.08%), Query Frame = 1 Query: 3859 NLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDI--LEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYL-----KRIEIRNTE-DFDVNLERERMSSDQK------SDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 NL+G ++ +YL+ + K YGG+ F LP S + L+ + + K++ + ++W N +GY ++PAY N F+NLLL L GISV++ P +Q ++ D++ Q + + +AI ++ G S + SF +V ER++GSKR Q +SG++P YW NF +D++ Y + + I + AF +Y + N A LLLI +G A +P MY S S AFV + N+++G T ISTF+++ L + + L +I++ +FL+FPQF LG G++ L + +++ L D + S F++ I W + + +GIV + L +S++ K +E E D DV ER R+ + DD L+++ L K Y + N++ AV+ L GV +CFGLLGVNGAGKTTTF Sbjct: 1059 NLSGEDVEEYLMGTTCQYLLKRYGGWSFGLP-------------------------------HSTTSDLEVVPDNRTLTKVW---RNHMKVWYNPEGYHALPAYVNSFNNLLLWDNLPDGEHPGDYKGISVNSKPYAGQQLSQ--DMILQNLGDTGVAICILLGFSILTGSFATAVVRERITGSKRLQQISGVSPTFYWAVNFTYDMVSYTVTTGLCIAVIAAFHLPAYTDNSNLGAVSLLLILFGFASLPWMYLISGVFSEEEMAFVTYISINIILGVSTIISTFLVNFLYLSSDSQSLYNAYNIMRWLFLVFPQFCLGWGLVSL------SKQRLMEDIMKLLGSD---PQESSSFAMDITGWPFVALAVNGIVCFTLRLVLTDSFIRWWRRKAVEPGQPELDTDVQAERSRVEEQSRVVDAATPDDTLQLVGLRKRYRLL-----------------NRSF-TAVDGLHLGVSPNQCFGLLGVNGAGKTTTF 1490 HSP 3 Score: 176.407 bits (446), Expect = 2.323e-44 Identity = 101/308 (32.79%), Postives = 170/308 (55.19%), Query Frame = 1 Query: 2260 VINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRT---EMDSIRQK---IGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 ++ L+L +Q LG NGAGKTTT +LTG PS G A I ++ + +M+ R+ IG CPQ++ L D LT +H+Y Y ++ + + IE V ++ + L+ + L SGG KRKLS A+A IG +++ LDEP++G+DP ++R +W + + ++ILT+H M+E + L D++AI+ G+ +C G+L LK +FG G+ + S+ N + +F+ + A + E+ Q +P N+ K +E+F L++ +SI Y +S T+L++VF+ A Sbjct: 1462 AVDGLHLGVSPNQCFGLLGVNGAGKTTTFKMLTGDIQPSGGDAIIRTQNGHSALLKMEKARRTGTLIGYCPQFDALDDLLTGWEHLYCYARIRGIPSHHIEQVSQELVTRLHLSLHADKLVKTYSGGTKRKLSTALALIGKPQLLLLDEPSSGMDPKSKRYLWKTITREVRGGCSVILTSHSMEECEALCDKLAIMVNGQFKCLGTLQHLKNRFGNGH-----MIKLRLSSGNSKVTEVTEFITSHFPGAYLKEQHISQLEFQVPS---NAGKLSEIFIALEKEKESLSIQHYSISQTTLDQVFINFA 1761
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004117.1 (pep scaffold:Pmarinus_7.0:GL489716:190:6182:-1 gene:ENSPMAG00000003765.1 transcript:ENSPMAT00000004117.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 295.049 bits (754), Expect = 5.811e-88 Identity = 174/470 (37.02%), Postives = 286/470 (60.85%), Query Frame = 1 Query: 1156 YQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELS---LTMYYSC--GLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGK--TTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIE 2544 Y+IR S + T + + +W P P N+ + Y GF+++Q+ I++A I ++ +E G+ + + PYPCY D FL + +++P +V++W SV ++I+ IV EKE RLKE MK+MGL+N V WV+WFI+ + L I V +++V L+ ++ S + +++ + Y ++ + F+VSV +SKA +A+ GGI+YF Y+ + +++ + E++ +T + C L+S AF K+ +E G+Q+ Q+P E F + ++++++DS +Y ++TWY+EAV PG YG+ +PW F RSYW+ + ++ + + + E EP +L L + I L K+Y + K +NNL+LN YE+QI +FLGHNGAGK T + TG+F P+SG+A I DIR+EMD+IR+ +G+CPQ+NVLFD LTVE+H++FY LK M ++I Sbjct: 7 YKIRQNSSFTEKTNEIR--RAYWRPGP--NSGGQY-YFFYGFVWIQDMIERAIINTFVGHDVVEPGNYVQLFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMMIQHIVAEKEHRLKEVMKMMGLSNAV-WVAWFITGFLQLSITVAVLTVILKYGQVLMHSDIFIIWLFLTIYALATVMFCFLVSVLYSKARMAAACGGIMYFLSYVPY-MYVAIREEVAHDKITAFEKCIASLMSTTAFGLGAKYFALYEVAGVGIQWHTFRQSPVEGDDFNLSLALLMLLLDSVVYGVLTWYIEAVHPGTYGLPRPWYFPLQRSYWLGSGRA--------DAWEWSGYEARGMEKEPTHLPLVVCIERLTKVYKTGKKLALNNLSLNLYENQIVSFLGHNGAGKTTTMYDTRTTGLFPPTSGSARIYGHDIRSEMDAIRKSLGMCPQHNVLFDQLTVEEHLWFYSRLKGMQAHDIR 461
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006988.1 (pep scaffold:Pmarinus_7.0:GL478499:147909:176415:-1 gene:ENSPMAG00000006318.1 transcript:ENSPMAT00000006988.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 247.669 bits (631), Expect = 1.407e-69 Identity = 184/555 (33.15%), Postives = 291/555 (52.43%), Query Frame = 1 Query: 1264 YVLSGFIFLQEAIDQAFIELVTNNESIEVGSSM-HIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKP---WNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLG---ISIHNLVKLY--PSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMD--SIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGY 2895 Y+ SGF+ LQ AID A I+L TN + + S+M M + + + +L L L A+ P ++ L+ ++V EKE ++ M+ MGL W+SW + ++ + ++++V R++ I S+ ++F + Y +S + ++ FF KA AS G +L F ++ + + L ++ +++ L S AF+ AV ++ E G FSNL + P P V + ++++D IYL + + + PG+ G+ P + FL R V N + I L RNN N I+HQ + LG I I N+ K Y + + L+LN YE QITA LGHNGAGKTT I+ILTG+ +PS+G + + ++D IR + C L+ S T L ++ S + R++ L + + LSGG KRKLS+A A +G R++ LDEPT+G+DP +RR +W LL+ + + +L+TH M+EAD L+D A++SQG+L+C GS +FLK KFG GY Sbjct: 135 YLESGFVSLQLAIDSALIQLQTNASARALTSAMVQRMGRGRHTVVRTWPQL--LASIYLAGAFAPFLSFLLLNLVLEKEQGSRDLMRTMGLRTPALWLSWAMVYGAMICLVSLVLAVVTRVTHIFDTSNTVLMFLLFLLYGLSLVAMALVLMAFFRKAKTASSVGSLLALLFCLLNIPVLLLWNSHTV-LHWLLSLFSPAAFALAVAQVVALEAGGSGAHFSNLLEGPN---PLAVP--LTMLLLDIAIYLGLAAALHRLLPGERGLEGPRIGFIFL-RRCSCVQNAWNLHQINLPRNN-LNPHISHQNLHDKVGREILGSEAIRIRNVRKTYRLKGTDVMALRGLSLNIYEGQITALLGHNGAGKTTLINILTGLITPSAGATHT-RAHTQHQLDKFEIRNTVKCCTSLTNLYPSRTTGRERKKDVSLSSFPSPDLPSEVSRVLSATGLEKAADKQVQDLSGGQKRKLSLAAALLGKPRLLILDEPTSGMDPVSRRRVWSLLLGGK-RECVTLLSTHSMEEADALADWKAVLSQGRLKCAGSSLFLKTKFGVGY 677
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006855.1 (pep scaffold:Pmarinus_7.0:GL486953:391:4596:1 gene:ENSPMAG00000006189.1 transcript:ENSPMAT00000006855.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 170.629 bits (431), Expect = 4.864e-47 Identity = 102/322 (31.68%), Postives = 169/322 (52.48%), Query Frame = 1 Query: 2251 KIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRM---DKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLE---EVFLKVADDPMNKLINKE 3198 +I ++ L + + LG NGAGKTTT +LTG S + G A++ + + ++Q IG CPQ++ LFD LT +H+ Y L+ + D+ + V+ ++ + LT + + SGG KRKLS A+A IG ++FLDEPT G+DP ARR +W+L++ R+++LT+H M+E + L R+AI+ G +C GS+ LK +FG+GY + S + + +L+F DA + E T V Q + +F ++Q + + + Y +S T+L+ +VF+ A + L +E Sbjct: 1 RILAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDASVTGGEAFLNGHSVLRDQHKVQQTIGYCPQFDALFDELTAREHLELYTRLRGIPWRDEKRVRQVVNWALQKLGLTSYADKPAGTYSGGNKRKLSTAIALIGYPPLIFLDEPTTGMDPKARRFLWNLILDIIKTGRSVVLTSHSMEECEALCTRLAIMVNGHFKCLGSIQHLKNRFGDGY------MITIRTRSTLHVKEVLRFFSRSFPDAVLKER---HHTKVQYQLKSETLSLAAVFTKMEQVLDVLGVEDYSVSQTTLDNDPQVFVNFAKKQSDNLEQQE 313 HSP 2 Score: 58.5362 bits (140), Expect = 4.452e-9 Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 1 Query: 5206 REVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 R +AV+ LC GVR GECFGLLGVNGAGKTTTF Sbjct: 1 RILAVDRLCVGVRPGECFGLLGVNGAGKTTTF 32
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Yeast
Match: ATM1 (Mitochondrial inner membrane ATP-binding cassette (ABC) transporter; exports mitochondrially synthesized precursors of iron-sulfur (Fe/S) clusters to the cytosol; human homolog ABCB7 can complement yeast null mutant [Source:SGD;Acc:S000004916]) HSP 1 Score: 81.6481 bits (200), Expect = 5.989e-16 Identity = 63/232 (27.16%), Postives = 118/232 (50.86%), Query Frame = 1 Query: 2191 PENLKLGISIHNLVKLY-PSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRT-EMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESV----LPRIIKDV--DLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLI-KYRSHDRTIILTTHHMDE-ADYLSDRVAIISQGKLQCCG 2856 PEN+ I+ N+ Y P KI + N + TA +G +G+GK+T + ++ + P SG I DI+ ++D++R+ IG+ PQ LF+ T+ +++ F G + D+ I V L +IK + + + +SGG K++L+IA + N+R++F DE T+ +D + + + + S RT + H + AD +D++ ++ G+++ G Sbjct: 429 PENVPYDITFENVTFGYHPDRKI--LKNASFTIPAGWKTAIVGSSGSGKSTILKLVFRFYDPESGRILINGRDIKEYDIDALRKVIGVVPQDTPLFND-TIWENVKF-GRIDATDEEVITVVEKAQLAPLIKKLPQGFDTIVGERGLMISGGEKQRLAIARVLLKNARIMFFDEATSALDTHTEQALLRTIRDNFTSGSRTSVYIAHRLRTIAD--ADKIIVLDNGRVREEG 654
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Yeast
Match: YOL075C_mRNA (Putative ABC transporter [Source:SGD;Acc:S000005435]) HSP 1 Score: 80.4925 bits (197), Expect = 1.842e-15 Identity = 68/260 (26.15%), Postives = 119/260 (45.77%), Query Frame = 1 Query: 2167 NHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISIL----TGIFSPSSGTAYILNEDIRTEMDSIRQK----------------IGLCPQYNVLFDSLTVEDHIYFYGLLK-----RMDKNEIESVLPRI-IKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHD-RTIILTTHH-MDEADYLSDRVAIISQGKLQCCGSL 2862 N +F P ++ + + +L + ++N +++ + A +G +G+GKTT +++L +G + + Y+L ED +E + K + PQ +VL LT + + F LK R K +E ++ + +KD T + LSGG KR+LSI I N ++FLDEPT G+D ++ + L K D RT I++ H + +L D+V I+S+G + C + Sbjct: 16 NRLSFSRIP---RISLHVRDLSIVASKTNTTLVNTFSMDLPSGSVMAVMGGSGSGKTTLLNVLASKISGGLTHNGSIRYVL-EDTGSEPNETEPKRAHLDGQDHPIQKHVIMAYLPQQDVLSPRLTCRETLKFAADLKLNSSERTKKLMVEQLIEELGLKDCADTLVGDNSHRGLSGGEKRRLSIGTQMISNPSIMFLDEPTTGLDAYSAFLVIKTLKKLAKEDGRTFIMSIHQPRSDILFLLDQVCILSKGNVVYCDKM 271 HSP 2 Score: 61.2326 bits (147), Expect = 1.288e-9 Identity = 46/190 (24.21%), Postives = 95/190 (50.00%), Query Frame = 1 Query: 2260 VINNLNLNFYESQITAFLGHNGAGKTTTISILTG-----IFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNV-LFDSLTVEDHIYFYGLLKRMDKNEIESV--LPRIIKDVDLTEKINALSMH-----LSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKY-RSHDRTIILTTHH 2787 ++ ++N F I A +G +G+GK++ +++++G +F+ + I+ DI+ + Q + L +LTV++ + + L+ E E + +I+ + L N + + +SGG KR++++ + + + ++ LDEPT+G+D F I ++L K R +TII+T H Sbjct: 709 ILQSVNAIFKPGMINAIMGPSGSGKSSLLNLISGRLKSSVFAKFDTSGSIMFNDIQVSELMFKNVCSYVSQDDDHLLAALTVKETLKYAAALRLHHLTEAERMERTDNLIRSLGLKHCENNIIGNEFVKGISGGEKRRVTMGVQLLNDPPILLLDEPTSGLDSFTSATILEILEKLCREQGKTIIITIHQ 898
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Yeast
Match: ADP1 (Putative ATP-dependent permease of the ABC transporter family [Source:SGD;Acc:S000000604]) HSP 1 Score: 77.7962 bits (190), Expect = 1.105e-14 Identity = 58/205 (28.29%), Postives = 100/205 (48.78%), Query Frame = 1 Query: 2260 VINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVD--------LTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRS-HDRTIILTTHH-MDEADYLSDRVAIISQGKL 2844 V+N ++ QI A +G +GAGKTT + IL + I I + S + IG Q + L +LTV + + LL+ E+ R+ K ++ N +SGG KR++SIA + + V+FLDEPT+G+D + + L++ S ++RT++L+ H YL D++ ++S+G++ Sbjct: 405 VLNEISGIVKPGQILAIMGGSGAGKTTLLDILAMKRKTGHVSGSIKVNGISMDRKSFSKIIGFVDQDDFLLPTLTVFETVLNSALLRLPKALSFEAKKARVYKVLEELRIIDIKDRIIGNEFDRGISGGEKRRVSIACELVTSPLVLFLDEPTSGLDASNANNVIECLVRLSSDYNRTLVLSIHQPRSNIFYLFDKLVLLSKGEM 609
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Yeast
Match: STE6 (Plasma membrane ATP-binding cassette (ABC) transporter; required for the export of a-factor, catalyzes ATP hydrolysis coupled to a-factor transport; contains 12 transmembrane domains and two ATP binding domains; expressed only in MATa cells; human homolog ABCB1 mediates multidrug resistance in many chemotherapy-resistant tumors by effluxing toxic compounds from the cell [Source:SGD;Acc:S000001692]) HSP 1 Score: 76.2554 bits (186), Expect = 4.014e-14 Identity = 71/273 (26.01%), Postives = 128/273 (46.89%), Query Frame = 1 Query: 2098 WVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIP-VINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRT-EMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRI-IKDV------DLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGE 2889 W+Y I + L NN + + K +SI NL YPS V N+N + + Q +G +G GK+T + +LT +++ G I D+ + S+R++I + Q +LF+ T+ D++ YGL + + E+ L + I D L +I+ + LSGG ++L IA A + S+++ LDE T+ +D + I +++ K T+++T H ++ + +A++ GK+ G+ L GE Sbjct: 1014 WIYRILDEKHNTLEVENNNARTVGIAGHTYHGKEKKPIVSIQNLTFAYPSAPTAFVYKNMNFDMFCGQTLGIIGESGTGKSTLVLLLTKLYNCEVGKIKIDGTDVNDWNLTSLRKEISVVEQKPLLFNG-TIRDNLT-YGLQDEILEIEMYDALKYVGIHDFVISSPQGLDTRID--TTLLSGGQAQRLCIARALLRKSKILILDECTSALDSVSSSIINEIVKKGPPALLTMVIT--HSEQMMRSCNSIAVLKDGKVVERGNFDTLYNNRGE 1280 HSP 2 Score: 64.3142 bits (155), Expect = 1.847e-10 Identity = 57/208 (27.40%), Postives = 101/208 (48.56%), Query Frame = 1 Query: 2239 YPSNKI-PVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRT-EMDSIRQKIGLCPQYNVLFDS-------LTVEDHIYFYGLLKRMDKNEIE-----SVLPRIIKDV--DLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTH--HMDEADYL 2808 YPS V+ N++LNF Q T +G +G+GK+T ++L + +G+ I +I+T + + + I + Q LF+ L D + +++ I+ ++L R I D+ L I + LSGG +++++IA AFI ++ ++FLDE + +D R + + +R TIILT ++ DYL Sbjct: 366 YPSRPSEAVLKNVSLNFSAGQFTFIVGKSGSGKSTLSNLLLRFYDGYNGSISINGHNIQTIDQKLLIENITVVEQRCTLFNDTLRKNILLGSTDSVRNADCSTNENRHLIKDACQMALLDRFILDLPDGLETLIGTGGVTLSGGQQQRVAIARAFIRDTPILFLDEAVSALDIVHRNLLMKAIRHWRKGKTTIILTHELSQIESDDYL 573
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Yeast
Match: MDL2 (Mitochondrial inner membrane half-type ABC transporter; required for respiratory growth at high temperature; localizes to vacuole membrane in response to H2O2; similar to human TAP1 and TAP2 implicated in bare lymphocyte syndrome and Wegener-like granulomatosis [Source:SGD;Acc:S000006191]) HSP 1 Score: 69.3218 bits (168), Expect = 3.856e-12 Identity = 61/196 (31.12%), Postives = 97/196 (49.49%), Query Frame = 1 Query: 2239 YPSN-KIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDI-RTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINA----LSMH---LSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGI---WDLLIKYRSHDRTIILTTHHM 2790 YP+ + + NLN +G +G GK+T +L ++P++GT I N+DI + S+R+ IG+ Q VL S T+ D+I YGL K EI SV + +T+ N + H LSGG K++++IA A I ++ LDE T+ +D + I + L+K +S TI+ H + Sbjct: 455 YPTRPSVQIFKNLNFKIAPGSSVCIVGPSGRGKSTIALLLLRYYNPTTGTITIDNQDISKLNCKSLRRHIGIVQQEPVLM-SGTIRDNIT-YGLTYTPTKEEIRSVAKQCFCHNFITKFPNTYDTVIGPHGTLLSGGQKQRIAIARALIKKPTILILDEATSALDVESEGAINYTFGQLMKSKSM--TIVSIAHRL 646
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Nematostella
Match: EDO46878 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RNL9]) HSP 1 Score: 853.203 bits (2203), Expect = 0.000e+0 Identity = 535/1427 (37.49%), Postives = 814/1427 (57.04%), Query Frame = 1 Query: 1150 LSYQIRIPLSRIDSTYKF-KVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXX-------------------------------XILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSK--FLDQS---DHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWSPASILDIPMVSPECDCSKTGNQICNDLRSGGPPNSYRIMTSSDK--LNNLTGYNISDYLLKNFPKLSRKLY-GGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYN--SNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSD-QKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 + Y+IR +D T + ++ D +W P P F+ Y+ GF+FLQ+ ID+A + + N E G+ + PYPCY+ D+F+ + +P + +AW + ++IKSIVYEKE RLKE MKVMGL VHWV+WFI++ ++I ++ + +TL+ +I S ++F + ++ + I F++SVFFS+ANV++ GGI++F Y+ + + E ++ + + L S AF A ++ +E+ G Q++NL+ +P F +G+ + +M+ID +Y L T+Y+EAV PGQYG+ +PW F +SYW +S + + + N A E+EP +L +G+SI NLVK+Y K ++ LNLN YE QI +FLGHNGAGKTTT+S+LTG+F P+ GTA I DIRT++D +R+ +G+CPQ+NVLFD LTVE+H++FY LK M+K+ I + + +KDV LT K + LS +LSGGMKRKLS+AMAF+ SRVV LDEPTAGVDP+ARR IWDLL+KY+ DRT++L+THHMDEAD L DR+AIISQGKLQCCG+ +FLK +G GYYL+L K + + ++ F+K +I A ++E + T VLP + KF ++F+ LD+++ ++ + SYG+SDT+LEEVFLKVA++ + E++ S + + ++ + Q P Q SK +D S D G LL +Q AL +KR+H+ +R+ K F+A++ILP + + ++ +I +K ++++P + + + EN Y ++ L L + G G CM+ + R + + P S+ +P SP+CDCS+ N +C G PP ++ TS D + ++G NISDYLLK + K +K Y + ++ +G S GD+ N AN S+ +++ + I +IW N+KGY ++PA+ N SN +LR++ + YGI+ N P+ + + + +++ +AI V+F LSF+PASFV+FLV ERVS +K VSG+ PY+YW++N++WD+ Y IP ++ + IF+AF +SY + N LL+ YG +I P MYP S F S STA++VL + NL VG T++TFIL++ E + E L +IN +LK VFL+FP + LGRG++DL N F S V + WDI G +F++ ++ + ++IE ++ K+ LK +E ED DV ER+R++S + D LR++NLTK+Y + R VAV+ LC GV +GECFGLLGVNGAGKTTTF Sbjct: 20 IKYKIR---QDVDFTPRTDRIRDWYWRPGPN-GWFSKQGYMNFGFVFLQDMIDRALLTISFNETVFEPGTYAQMFPYPCYIRDRFVFYIGGTMPLFMTLAWIYTAAMIIKSIVYEKEKRLKEVMKVMGLGRTVHWVAWFINSASTMLITIIFLVITLKAGRILQHSDPFIIFLFLVVFMFATIMMCFLISVFFSRANVSAACGGIIFFVTYLPYTMVRWFEAFMNSSQIAAACLSSTTAFGVACNYLARYEEQGVGAQWNNLYASPIAGDEFSLGYAMGMMMIDGVLYALATFYIEAVMPGQYGIPRPWYFPLQKSYWFPQKPASPDMDDVAFSPDGATNNDVAMETEPSHLSMGVSIRNLVKIYKEGKKLAVDGLNLNLYEGQILSFLGHNGAGKTTTMSVLTGLFPPTHGTALISGYDIRTDIDMVRRNLGMCPQHNVLFDCLTVEEHLWFYASLKGMEKSRIPGEIEKFLKDVGLTNKRHELSANLSGGMKRKLSVAMAFVAESRVVILDEPTAGVDPYARRSIWDLLLKYKK-DRTVLLSTHHMDEADVLGDRIAIISQGKLQCCGTSLFLKSHYGNGYYLTLTKKTPGLGLDSVDASERDSLGSRSSDSDPISDSVLGDYSDVYCNEKSVTSFIKSHIPSASLVEHVGTELTYVLPSHAAKEGKFQDMFEELDRNLHKLHVGSYGVSDTTLEEVFLKVAEEAQS-----EEAGTSAEVPVRRSTFTFSSHPVKCL--QPPAQGDSKNDSVDGSLEFDDRESGLALLLRQFFALLVKRFHHCRRNRKAFIAQIILPAVFVCLAMIVAQIRPFYEKPA-LELTPHMFVKEEPYENY-VLYANDDPGEPLARNLSDAFLQYPG-LGTWCMSNNCSR----------KPIAFQP-SLSPVPTPSPDCDCSEAMN-VCPAGAGGPPPPTW---TSYDGNIIQKMSGRNISDYLLKTYMKFVKKRYINKIEIMIVREYGGLS--FGDN---------YNNLPANVRNSSDPAIRRL-----------ISPRNVKIWYNNKGYHALPAFLNTLSNTVLRAKAKARGLDPSQYGITAYNHPMNYTKEQLDDETFVKRAVDVLVAICVVFALSFVPASFVVFLVSERVSKAKHLHLVSGVKPYIYWLANYVWDMCNYFIPAMLCVFIFLAFGDESYTTAMNFPPTFCLLLLYGWSITPLMYPASHFFSVSSTAYIVLISINLFVGINCTLATFILELFEDDKE-LTDINTVLKSVFLVFPNYCLGRGLIDLAKNQFLGIFSRFGVNLTRDPFSWDITGRNIFAMIIEGFVFFTLTVLIEYRFFIKLRPVKV---VLKPVE---EEDDDVQRERQRVNSGLGHATDALRLMNLTKVYR------------------SRRKRIVAVDRLCVGVPKGECFGLLGVNGAGKTTTF 1369 HSP 2 Score: 191.43 bits (485), Expect = 8.314e-49 Identity = 130/426 (30.52%), Postives = 209/426 (49.06%), Query Frame = 1 Query: 1918 QFSNLFQNPGESL---PFG---VGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPS--NKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 QF +F G +L PF G I MII+ F++ +T +E F F+ R V +K E + + + Q S + + + NL K+Y S +I ++ L + + + LG NGAGKTTT +LTG +SG ++ I ++++ Q +G CPQ++ L D LT +DH+ Y L+ + + I V+ +I+ ++L + + + SGG KRKLS A+A +GN +VF+DEPT G+DP ARR +W+++ RT+ILT+H M+E + L +RVAI+ G+++C GS LK KFG+GY + L +N I F + D +V Q + LF +L+ + I Y ++ T+L++VF+ A D Sbjct: 1237 QFLGIFSRFGVNLTRDPFSWDITGRNIFAMIIEGFVFFTLTVLIEYRF-----------FIKLRPVKVV-LKPVE------EEDDDVQRERQRVNSGLGHATDALRLMNLTKVYRSRRKRIVAVDRLCVGVPKGECFGLLGVNGAGKTTTFKMLTGDIPVTSGEGFVDGHSILSDINGAHQSMGYCPQFDALDDLLTAKDHLRLYARLRGVPERYIPKVVNSLIQRMNLVQYQDVCAGKYSGGNKRKLSTAIALVGNPAIVFMDEPTTGMDPKARRFLWNIITGIMKEGRTVILTSHSMEECEALCNRVAIMVNGQMKCLGSPQHLKNKFGDGYTVILRVAGSNPDTEQVCQFIIQCFPNAVLKDK--------HHNMVEYQIPCQGLSVSRLFGHLEANRKMFDIEDYSVTQTTLDQVFINFAKD 1636
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Nematostella
Match: EDO38879 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBQ0]) HSP 1 Score: 573.933 bits (1478), Expect = 5.002e-174 Identity = 370/1102 (33.58%), Postives = 577/1102 (52.36%), Query Frame = 1 Query: 484 SENETTIESGYNELGEIICGS-PENDFKLFMRNFIKNQRRKRSLLT--CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNV--FINDVKKFCKAYYSANPKICDAVNTLFNITNVKSY-----------------------IDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSFR------NFLAVIIFNETFQYLTPKNT--TFLSYQIRIPLSRIDSTYKFKVLDR----FWTPYPRR--NTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYS----CGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQ-----------AFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXX----------------XXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLIN-----------------KEKSYYSYYCNI------------LKMK--LRINATKTEIFLNQNP-----------------DQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAE 3426 + N+ I+ + LG ++CGS P+ +++ + +S T +L+F N K+ Y PN +I+ AN TF ++ L+ + +W + N ++ V + +AY + ++ ++ T+ + ID V K+ WIE+ +LD F+ KD + L +F + + I+ F + P T ++Y+IR+ ++TY DR +W P P+ ++ D GF++LQ+ I++A + L E I+ +H MPYPCY D+F+ + +++P L ++W +V ++++SIVYEKE RLKE MK+MGL+N VHWV+WFI+++ V+ I V++++V L+ K+ A S +++ + + I I F++S FFSKA +A+ GGI+YF YM FV EG T+ S LLS AF ++ +E+ EGVQ+SN+ ++P F + + ++ D+F+Y+++ WY+EAV PG YG+ +PW F +YW + ++ + P +R N + + A+E EP +L LG++I NL K+Y S ++ LNLN YE QI +FLGHNGAGKTTT+SILTG+F P++GT YI DIR +MD IR +G+CPQ+NVLFD LTV++H++FY +K M + +++ + ++++D+ L K N LSGGMKRKLS+AMAF+ SR V LDEPTAGVDP+ARR IWDLLIKY+ RTI+L+TH M+EAD L DR+AIIS GKL+C GS ++LKR+FGEGY L+ +N S R+ E + F+ +I+ A++ ++ ++T +LP N I F +LF +L+Q++ + I SYG++ T LEEVFLKV D +N+ N +K + + + L+M +R TE L P F H L G L QQ AL +KR+HYA+R+FKG +++ Sbjct: 5 ARNKAYIQGMWKNLGPVLCGSDPDEQPDRVVKHMFDYRCLTKSCQTRALRLMFYLLTHNP----------------KILYAPNNTAADDVIKDANRTFSDIEYLQDLAHDWLNTSSQIRRALLQNETQFYLGLVSNYIRAYPDSYWELISGISEKDPTTHAPYFKNIHSLLTKKNGGVNPIIEQLDRIDAVLKI--WIEQ-TKAFKLDIFV---GFKDEESLVRYAFNTSGVRGDDSSKIVAGIVFTNIEPNKTLPVHVTYKIRM-----NATYFTPATDRIRDSYWRPGPQSWGQSYYDL-----GFVWLQDKIERAVVNLHAMREVIKPAVYLHEMPYPCYSKDRFMLVIQHMMPLCLTVSWIYTVAIVVRSIVYEKEQRLKEVMKMMGLSNVVHWVAWFITSVSVMSITVMLLTVILKYGKVLAFSDPLIIWLSLMLFAIVTIVFCFLISAFFSKAKLAAACGGIIYFLTYMPFVFVSIREGAAHATIESSEKMAISLLSTSAFGLGARYFALYEEQGEGVQWSNIGKSPIRGDDFNLLKVLYFLVFDTFLYVILVWYIEAVHPGSYGLPRPWYFPIQPTYWFGH--NTNACPNLRKKNYRMMTSDEMEDSPQTPGLLAYEREPVHLPLGVTIDNLQKVYKSG-TKAVDGLNLNLYEGQIMSFLGHNGAGKTTTMSILTGLFPPTAGTGYIYGHDIRFDMDKIRHNLGMCPQHNVLFDGLTVDEHLWFYARMKGMAAHAVKTEMNQLVEDIGLPNKRNCAVETLSGGMKRKLSVAMAFVAGSRTVILDEPTAGVDPYARRAIWDLLIKYKK-GRTILLSTHFMEEADILGDRIAIISSGKLRCVGSPLYLKRRFGEGYNLTLVKKSISSPHGSIGSFRRSTSSNLEASRRSEEKLTSFITSHISSAQLKHKTNQEFTFILPDNSIKRGAFKKLFADLEQNIDVLGIDSYGITHTLLEEVFLKVTDVSLNETGNMPHHRQDKLPTQLLQFPADKPGHLGHVLLSPPLPTLPTNEGLEMSDVVRNRGEDTERLLGYQPLSDSGTHQGNLYNEASNGHAAGLFEGVGSHTLTGSALQWQQFYALMLKRFHYARRNFKGVISQ 1070 HSP 2 Score: 259.61 bits (662), Expect = 1.323e-69 Identity = 178/531 (33.52%), Postives = 267/531 (50.28%), Query Frame = 1 Query: 3748 VSPECDCSKTGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKF---LDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYNAL----QWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIR------NTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 P C CS G D + G + + D L N+TG N+S+YLL YG F + FV S L+S+ ID +++ I+ + ++ W N+KGY ++P Y N+ +N +LR+ + KS YGI+ N P ++ D + Q ++ +AIFVI +SF+PASFV+FLV ER + +K QFVSG++P VYW+SN+LWD+ Y+IP + I + F +Y N A + L + YG +I P MYP +F S S+A+V + NL VG T++TFIL + + E L ++ND++K + L FP + LGRG+MDL +N + + E +++ +W I L + ++I+ I+IE +LKR I TED DV ER+R+ DD++++ NLTKIY Y + + + +AV+ LC GV +GECFGLLGVNGAGKT+TF Sbjct: 1209 AGPGCRCSANGTWYLCDQGAAGKQPKELVTITRDTLQNVTGRNMSEYLLYTTQTFRMHRYGALSF-------------------GNVVQFV--------PSRLDSVH-IDAVRR----LAIREA-SKSWYNNKGYHALPTYLNVMNNAILRASIPKSKGNPAAYGITAYNHPFPFNSTSAVHLSADYLRQGT-DLVIAIFVIIAMSFVPASFVVFLVTERSTKAKHLQFVSGVDPVVYWLSNYLWDMCNYLIPALACITLLYLFGVPAYASETNFPAVVGLFMLYGWSITPMMYPSAFCFSEASSAYVAMIVLNLFVGVTATVTTFILQLFPDD-EVLTDVNDVIKLISLGFPNYCLGRGLMDLAYNQYLSEYYRQIGEEDSIKSPFEWMIVSRNLVCMLMEGFAFFILTILIEFKF------------FLKRRRIPVSQLPIETEDEDVAAERDRVLRGDADDDLVKIENLTKIY-----------------YSRKRGKHLAVDRLCVGVPQGECFGLLGVNGAGKTSTF 1675 HSP 3 Score: 105.916 bits (263), Expect = 1.266e-22 Identity = 57/160 (35.62%), Postives = 92/160 (57.50%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIP---VINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFL 2682 + I NL K+Y S K ++ L + + + LG NGAGKT+T +LTG + ++G A + + I T++ + + IG CPQ++ L D +T E+HI Y L+ + + EI+ V+ I+ ++LT+ SGG KRKLS A+A IG+ ++FL Sbjct: 1628 VKIENLTKIYYSRKRGKHLAVDRLCVGVPQGECFGLLGVNGAGKTSTFKMLTGDTAMTAGDAVLNSYRIATDIHRVHRCIGYCPQFDALIDEMTSEEHILLYARLRGVPEKEIKQVMKWAIRKMNLTQYAKTPCKTYSGGNKRKLSTAIALIGDPPIIFL 1787
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Nematostella
Match: EDO48951 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RI12]) HSP 1 Score: 452.21 bits (1162), Expect = 1.761e-131 Identity = 302/835 (36.17%), Postives = 471/835 (56.41%), Query Frame = 1 Query: 964 DGVSKLFSWIERGLNCTELDRFIPLD----SLKDIDKLTNQSFRNFLAVIIFN-ETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHI--MPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEG--ELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWV---YNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLY--PSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAE 3426 D VS L S + +N ++R + + S++ + + +LA ++F+ E + PK + Y +R+P S ++ +R + + T Y SGF LQ AID A I+ + M+I +PYP Y+ D F+Q +ANLLP LL +A+ S +IK +V+EK+ RLKE MK+MGL+N++HW +WFI ++ L ++I+++ +++ KI S+ VVF Y+IS I F +SVFFS ++ + G +L++ + + + + E LS + S LL + E G FSNL +P F + + +MII S +YL++TWY+ VFPGQYG+ KP+ F +SYW ++ + ++NN A E EP +L +G+ I +L K++ + ++NL+LN Y+ QITA LGHNGAGKTTT+SILTG+F+P+SG+A I N+ I T++D IR+ +GLCPQ+NVLFD LTVE+H+ F+ LK + + ++I D+ L +K A S LSGGMKRKL+ A+A +G S VFLDEPT+G+DP+ARR WDLL+K+++ +T+ILTTH MDEAD+L DR+AI++ G+L+CCGS +FLK ++G GY+ + + I+ V+ + A+++ + VL N S+ F LF L+ + + I SYG+S T++EEVF+KV + EK+ +IL + LRI ++++ + QN K + L + L GF L Q A+ +KR+ +KRD K + + Sbjct: 84 DLVSGLMSSVASTMNIKVVNRSMVHNKDWTSVEQMVAEVAEHEDKYLAAVVFDVEKDKLSLPK---VVKYTLRMPHSSAGERKTWRT-ERTYPNFQGIGARTTNFYTFSGFAILQYAIDMAIIQ-AKASLPFPFAYPMNIKQLPYPGYVQDFFVQTVANLLPLLLTLAFIYSAVSIIKELVFEKQQRLKESMKMMGLSNWIHWSAWFIKCLLFLGFTIIIITIFVKVLKIFEFSNGIVVFLFFLCYIISMISYCFFISVFFSNPTLSMLFGSVLWYAALLPYQLLAQNENYDTLSQSAKASMCLLPNTCLGIGATLIARLEGFKTGASFSNLASSPSADDHFSLAWVLGMMIISSLVYLILTWYISTVFPGQYGIPKPFYFPFMKSYWCGFSHDDVVEAGLERVKNN--------PAIEDEPTDLAIGVQIKDLRKVFKGSTGSKVAVDNLSLNMYKGQITALLGHNGAGKTTTMSILTGLFTPTSGSAMIDNKSILTDIDGIRESLGLCPQHNVLFDRLTVEEHLEFFINLKGKYGQAAKDEVLQMITDLQLLDKRKAKSSELSGGMKRKLNCAIALVGGSETVFLDEPTSGMDPYARRATWDLLLKHKA-GKTVILTTHFMDEADFLGDRIAIMADGQLRCCGSSLFLKSRYGVGYH------LTLVKKEDCDDNAIINAVRETVPSAQVLSNVGAEIEFVL--NGEASKDFESLFVKLENNKEDYGIASYGVSCTTMEEVFMKVGE-------GSEKTVE----DILNLLLRILSSQS-LLRYQNIKIKILRLLKSNYPLQTGFALQWQHYKAMLVKRFINSKRDKKSVVTQ 884 HSP 2 Score: 209.92 bits (533), Expect = 1.943e-54 Identity = 129/424 (30.42%), Postives = 222/424 (52.36%), Query Frame = 1 Query: 1912 GVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEI---NHQAFESEPENLKL-GISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 G+QF++ N GVG + M +++ + ++T ++ V +P+ IP+ +Q+C++ + PE +K + + +L K+Y + +++L + + LG NGAGKTTT S+LTG S S GTAY+ DI+T + ++Q+IG CPQ++ + +T + + + L+ + ++I +V+ I+ ++L + + L SGG KRKLS A+A +GN ++FLDEPT G+DP ARR +WD L R+I+LT+H M+E + L R+AI+ G+ +C GS LK +FG GY L L SN +FV A+++E T + +++ ++ +F L+++ A ++I+ Y +S TSLE+VFL +A + Sbjct: 1334 GIQFTDSSLNWDRP---GVGQHALYMAVEAVVLFILTLLIQ--------VRRPYRL----------------IPICPWTSQDCDVAGERARVHSLNPEQIKKESVIVKDLTKVYHGSDRTAVDHLCIGIPRGECFGLLGVNGAGKTTTFSMLTGDQSISEGTAYLDGYDIQTHLKEVQQRIGYCPQFDAFIERMTGREMLTMFARLRGVQPDKIPNVVSTTIEHLNLGKWADKLCGDYSGGNKRKLSTAIALVGNPPIIFLDEPTTGMDPVARRFLWDSLTHVMKGGRSIVLTSHSMEECEALCTRLAIMVNGQFKCVGSAQHLKSRFGMGYTLMLKVEARLVPVSNTE-----QFVSSTFPGAQLLESHNGMLTYQINSTELS---WSRIFGELERNRASLNIVDYSVSQTSLEQVFLNLAKE 1722 HSP 3 Score: 144.05 bits (362), Expect = 2.503e-34 Identity = 115/379 (30.34%), Postives = 194/379 (51.19%), Query Frame = 1 Query: 4234 DYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSF-----FISTPSTAFVV-LNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNS------------NSIVKHEYNALQWDIAGEKLFSLFSL--SIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSS---DQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 + GI +N P+ K D V I + LAIF+ G++F+ ASF+ FLV+ER S +K QFVSG++ + YW + + WD + Y++P ++I+I+F AF + + + + LLLI +GL ++P +Y SF I+ T FV+ + ++ +L ++ F+ I +N L + +I+ VF++ P + + ++D+ NY Y ++ ++ ++L WD G +L+ ++ +I+ ++I+ R+I I ++D DV ER R+ S +Q + + V +LTK+Y+ G D AV++LC G+ GECFGLLGVNGAGKTTTF Sbjct: 1119 EQGIETTNHPLPNNAQNK-ADNVTSTISVLFLAIFMSMGMAFMAASFITFLVQERTSKAKHLQFVSGVDAFSYWSATYTWDFLNYLVPCLLILILFAAFQIEEF--ENDMGSVFLLLILFGLVVLPFIYVMSFAFKSQLIAYAMTVFVLSIMSFGML------LAVFLCRIPSLN---LLDEAEIMHYVFMLLPTYTVSYALIDMSTNYGYRKICSTLQTVESCRDNGIQFTDSSLNWDRPGVGQHALYMAVEAVVLFILTLLIQVRRPYRLI----------PICPWTSQDCDVAGERARVHSLNPEQIKKESVIVKDLTKVYH------------GSD--------RTAVDHLCIGIPRGECFGLLGVNGAGKTTTF 1455
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Nematostella
Match: EDO32070 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SW56]) HSP 1 Score: 275.404 bits (703), Expect = 2.018e-80 Identity = 184/530 (34.72%), Postives = 308/530 (58.11%), Query Frame = 1 Query: 1261 KYVLSGFIFLQEAIDQAFIELVTNNESIEVGS-SMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMY--YSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESE---PENLKL----GISIHNLVKLYPSNKIPV-INNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIR--TEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLS 2811 KY++ LQ +ID A ++V N V + ++ +MP + LQ + ++P +V+A+ P +T+L+ ++V EK+ + KE M++MG+ + +W+SWF++ +V++I +IM ++ S+ V+ V + Y +S I +FM+S F A G + F +F V I S+ Y + + S AF+ A+ + +++ G QFSNL G+ F V +CI+++I+D +YLLI Y++AV P +YG +P F+ S+W + L + + H+ + SE P ++ ISIHNL K++P K V ++ ++++ YE QITA LGHNGAGK+T I LTG+ PSSGTA I +DI ++ +R+ IG+CPQ +V+F+ LTV++H+ FY LK ++ + I+K++ L EK + ++ +LSGG KRKLS+ ++ +G+ +V+FLDEPT+G+DP +RR +W LL + + ++ ++LTTH MDEAD L+ Sbjct: 8 KYLIYNTTTLQASIDAAISKVVANLPFYIVPNITVQMMPKAQF--TPSLQGIQTIVPIYMVLAFSPYITILVINLVREKQEKHKELMRIMGMVDTAYWLSWFLTYAIVVLIACLIMVTVSVIAGFFGESNYLVLLIVFYLYGLSIIMLSFMMSPLFKNPKTA----GFIASLFTAIFAVLIIPLTGPSIPQYAKWLVSIFSPTAFAFALNEAV---EVHPGAQFSNL-ATKGD---FPVLNCIVMLIVDILLYLLIALYLDAVVPAEYGRRQPPYFIFQPSFWKTMFQRGGG-SLEAHGVRRQLSAHEVYSSEDVEPVAQEMHGREAISIHNLKKVFPGKKPTVAVDGISMDIYEGQITALLGHNGAGKSTLIGALTGMIQPSSGTALIYGKDISRFGDLAELRRNIGVCPQQDVIFEFLTVKEHLEFYFKLKTGGDSQQNNGADAILKEIGLQEKKDDIAKNLSGGQKRKLSVGISLVGDPKVLFLDEPTSGMDPHSRREMWKLL-QGQCKEKCVLLTTHFMDEADILA 522
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Nematostella
Match: EDO32071 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SW57]) HSP 1 Score: 168.703 bits (426), Expect = 7.181e-46 Identity = 102/304 (33.55%), Postives = 168/304 (55.26%), Query Frame = 1 Query: 2260 VINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXX--XXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 V+ ++ ++ LG NGAGKTTT++++T S G+ + D++TE + Q +G CPQ + LFD +T+E+H+ Y ++ + I++V+ + + +TE N + LSGG KRKLS MA +G+ ++ LDEP+ G+DP ARR L K + R ILTTH M+EAD L RV I+ +G+L+C GS LK KFG GY L + + + + ++ FV+ +A+ E + +P+++++ K + F L++ + I Y S ++LE+VFL+ A Sbjct: 3 VVKDVYFGVTPGEVFGLLGPNGAGKTTTLNMMTAGIPASRGSVSVAGYDLQTETHKVFQHMGFCPQQDALFDDITLEEHLTLYASVRGVPWASIDNVVNHYMSAMKITEHANKRAKELSGGTKRKLSFGMAMLGDPDLLLLDEPSTGMDPSARR----FLCKNVTGARGAILTTHSMEEADALCSRVGIMVKGQLKCLGSTQHLKSKFGSGYTLEIKLSPSFQSSDPDVDMQTQLVAFVEGLFPNAKRTESFGDRVIYKVPKSNVS--KLSSTFATLEEGKRSIGIEEYSFSQSTLEQVFLEFA 300
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Medaka
Match: ENSORLT00000045391.1 (ATP-binding cassette sub-family A member 1-like [Source:NCBI gene;Acc:101164844]) HSP 1 Score: 882.093 bits (2278), Expect = 0.000e+0 Identity = 585/1667 (35.09%), Postives = 912/1667 (54.71%), Query Frame = 1 Query: 547 PENDFKLFMRNFIKNQRRKRSLLTCQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSAN--PKICDAVNTLFNITNVKSYIDGVSKLFSWIERGLNCTELDRF--IPLDSLKDIDKLTNQSFRNFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXX--------------------------------------XXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD--------PMNKLINKEKSYYSYYCNILKM-----KLRINATKTEI---FLNQNPDQKQSKFLD-QSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCM--NPSIYRLDNYQCFYRNENNMWSPA---SILDIPM--------VSPECDCSKTGNQI----CNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKT---FKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYN---SNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 P +D + M + +N + C + + ++F ++ PL+ GKV Y P+ R ++E+AN TF L ++ + W F+ ++ N + + S + P DA N L + + S + L C EL++F +P + + L + F A I+F E Q + +L Y+IR+ + + T K V +R W+P N + + +Y+ GF +L++ ID A I L T+ S +G + MPYPCY+ D FL+ LA LP + +AW SV +++K IV +KESRLKE +++MGL V+W +W ++ ++ + I V++++ ++ K+ S +VVF + + +S I + F++SVFFSKAN+A+ GG++YF Y+ V+ + LLS VAF + + +E+ G+Q+ N+ +P E + I++M++D+ IY ++TWY+E VFPGQYG+ +PW FL SYW E IP + + ++ E N+K G+SI NLVK+Y + K ++ L+++FYE+QIT+FLGHNGAGKTTT+SILTG+F P+SGTA I DIRT+MD+IR+ +G+CPQ+NVLFD LTVE+HIYFYG LK ++ +E+++ + ++IKDV L K L +LSGGM+RKLS+A+AF+G S++VFLDEPTAGVDPFARRGIWDLL+KY+ RTIIL+THHMDEAD L DR+AIIS GK++CCGS +FLK+ FG GYYL+L+++ + R+G +++ +FV+ ++ +A +E + T +LP F LF+ LD+ M ++ + SYG+SDT+LEE+FLKVA+D P + + K+ S M K TK E+ N+ D K+S ++ + ++ G+ L++QQ +AL IKR+H+A+R KG +A+++LP + + ++F I +++ PW+ S+ TFY + ++++ + G G RCM NP I RL C ++ +SP+ S+ DI + SP C CS G I C G P R+ ++D L NLT N++D+LLK + +K YGG S G +S+++ + + +NL + D +QK K G + + ++W +KG+ SM ++ ++ +N +LR L + YG+SVSN P+ + + L + ++ ++I VIF +SFIPASFV+FL++ERVS +K QFVSG+NP VYWV++F+WDI Y+IP +++ IFI F ++Y+ +N A ILLL+ YG AI P MYP SF + PSTA+VVL NL +G +++TF++++ E E + +IN+I+K+V LIFP F LGRG+MD+ N SN + L W++ G+ L ++ + ++I+ + L +++ ED DV ER+R+ + ++DVLR+ +LTK+Y + AV LC GV ECFGLLG+NGAGKTTTF Sbjct: 17 PTSDQQDTMNSSFQNSQDSDPF--CTTLIDTMVTTPSMQF-LWKNFRPLLKGKVLYTPDTPAARLLVEEANATFMALAAIKEFADSWG-EDGPFVWGFVENGTAVVNESSANSNNSSTDTPPTSEDAYNDLTHFLKLLSKV-------------LGCFELNKFEAVPTEYELVTEALEHLKNDTFWAGIVF-ENLQPNSSSIPPYLKYKIRMDVEEVQRTDK--VENRLWSPGANDNPYENLRYIWGGFAYLEDIIDHASIRLQTST-SQPLGVYVQQMPYPCYVDDPFLRALAGFLPLFMTIAWIFSVALIVKGIVGDKESRLKETVRIMGLRGEVYWSTWLLTCLLPMAISSVLLTIIIKYGKVLQYSDPSVVFIFLLVFCLSTISECFLISVFFSKANLAAACGGLIYFLLYLPHVLCYAWRDVMGFQAKVGVSLLSCVAFGYGCENLSKFEEQGVGIQWHNIATSPEEGQRYTFIVSILMMLLDAAIYWVLTWYIENVFPGQYGIPRPWYFLFTYSYWFGKTSVPEDIPDNFKLLKRSSVPNEFLEKPDPNMKAGVSIRNLVKIYKTGKKVAVDGLSVDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDIRTDMDNIRKYLGMCPQHNVLFDELTVEEHIYFYGRLKGLNPSELQTEMDQMIKDVGLLHKRKDLVKNLSGGMQRKLSVAIAFVGGSKIVFLDEPTAGVDPFARRGIWDLLLKYKK-GRTIILSTHHMDEADILGDRIAIISHGKMRCCGSSIFLKKSFGSGYYLTLVRSGTEVMTAQRSGIISGIAEEKPTESDCPSSSSLDEDRGCQSSDNSNPTDLKHVTQFVRRHVPEAVFLESIGQEITFILPYARARDGTFATLFQELDKVMDKLGLTSYGVSDTTLEEIFLKVAEDTGVDKELSPTKEPVVKDYKKDSRESKRRSMSRFHGKAAKGNTKDELKKKLSNKVEDFKKSASVNGRGSVVITGWKLIRQQFLALFIKRFHHARRSRKGLIAQVVLPAIFVCLALVFSLIVPSFTDYPSLELQPWMYNSQ------TTFYSNDMPEDANVSRVVETLVDNPG-FGTRCMEGNP-IPRL---PC-SSGASDWFSPSVDQSVADIFLNGNWSMSNPSPSCQCSTPGRTIIMPDCPPGAGGL-PPPQRVQNTTDTLLNLTSINMTDFLLKTYEHSGKKRYGGI-----SVGGINSQVL------------LTEVEIEEAFANLEPPGYGDTIQKAEMVLKKLGTRNN-VKVWFYNKGWHSMVSFLSVVNNGILRGYLPEGQ-NLRQYGLSVSNHPLNLSKEQLSLSAMASTSSDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHLQFVSGVNPTVYWVASFVWDICNYVIPCFLVVGIFICFQQKAYVSPQNLPALILLLVMYGWAITPMMYPASFIFTVPSTAYVVLTCLNLFIGINGSVATFVMELFE--DESITKINNIVKQVLLIFPHFCLGRGLMDMARNQAMANVFSNFGEDRFEDPLSWNMVGKNLIAMSIQGAVMFAFTLLIQYKFFYK------PRLSLPKVQSEEKEDVDVARERQRVHEGRANNDVLRICDLTKVY--------------------PRKSTPAVYRLCVGVPAAECFGLLGINGAGKTTTF 1601 HSP 2 Score: 196.823 bits (499), Expect = 6.297e-50 Identity = 112/322 (34.78%), Postives = 173/322 (53.73%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESR--LQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 + I +L K+YP P + L + ++ LG NGAGKTTT +LTG SSG A++ IRT+M + Q +G CPQ++ + D L +H+ Y L+ + + E+ V I+ + L + N + SGG KRKLS AMA IG V+FLDEPT G+DP ARR +WD ++ R+++LT+H M+E + L R+AI+ G+ QC GS+ LK +FG+GY + + + FV+ + E+ LQ+ + L Q ++ FTE L H E+ + Y +S T+L++VF+ A + Sbjct: 1557 LRICDLTKVYPRKSTPAVYRLCVGVPAAECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTQMGDVHQNMGYCPQFDAINDLLNGREHLELYARLRGVPEEEVAMVAEWGIQKLGLVKYANKSAGTYSGGNKRKLSTAMALIGCPPVIFLDEPTTGMDPKARRFLWDCILSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFQCLGSIQHLKNRFGDGY-----TLIVRVGGCPPDLKPVEDFVEETFPGTVLKEKHHNTLQYQL-LSQEGALAKIFTE----LTDHQQELGLEDYSVSQTTLDQVFVNFAKE 1868
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Medaka
Match: ENSORLT00000046301.1 (ATP-binding cassette sub-family A member 1-like [Source:NCBI gene;Acc:101164844]) HSP 1 Score: 879.782 bits (2272), Expect = 0.000e+0 Identity = 587/1667 (35.21%), Postives = 908/1667 (54.47%), Query Frame = 1 Query: 547 PENDFKLFMRNFIKNQRRKRSLLTCQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNN--VFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIERGLNCTELDRF--IPLDSLKDIDKLTNQSFRNFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXX--------------------------------------XXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD--------PMNKLINKEKSYYSYYCNILKM-----KLRINATKTEI---FLNQNPDQKQSKFLD-QSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCM--NPSIYRLDNYQCFYRNENNMWSPA---SILDIPM--------VSPECDCSKTGNQI----CNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKT---FKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYN---SNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 P +D + M + +N + C + + ++F ++ PL+ GKV Y P+ R ++E+AN TF L ++ + W F+ ++ N V + P DA N L + + S + L C EL++F +P + + L + F A I+F E Q + +L Y+IR+ + + T K V +R W+P N + + +Y+ GF +L++ ID A I L T+ S +G + MPYPCY+ D F+Q + +LP L++A+ SV + IK +V EKE RLKE ++ +G+ N W S F T+++L +P V+MSV ++ K+ S +VVF + + +S I + F++SVFFSKAN+A+ GG++YF Y+ V+ + LLS VAF + + +E+ G+Q+ N+ +P E + I++M++D+ IY ++TWY+E VFPGQYG+ +PW FL SYW E IP + + ++ E N+K G+SI NLVK+Y + K ++ L+++FYE+QIT+FLGHNGAGKTTT+SILTG+F P+SGTA I DIRT+MD+IR+ +G+CPQ+NVLFD LTVE+HIYFYG LK ++ +E+++ + ++IKDV L K L +LSGGM+RKLS+A+AF+G S++VFLDEPTAGVDPFARRGIWDLL+KY+ RTIIL+THHMDEAD L DR+AIIS GK++CCGS +FLK+ FG GYYL+L+++ + R+G +++ +FV+ ++ +A +E + T +LP F LF+ LD+ M ++ + SYG+SDT+LEE+FLKVA+D P + + K+ S M K TK E+ N+ D K+S ++ + ++ G+ L++QQ +AL IKR+H+A+R KG +A+++LP + + ++F I +++ PW+ S+ TFY + ++++ + G G RCM NP I RL C ++ +SP+ S+ DI + SP C CS G I C G P R+ ++D L NLT N++D+LLK + +K YGG S G +S+++ + + +NL + D +QK K G + + ++W +KG+ SM ++ ++ +N +LR L + YG+SVSN P+ + + L + ++ ++I VIF +SFIPASFV+FL++ERVS +K QFVSG+NP VYWV++F+WDI Y+IP +++ IFI F ++Y+ +N A ILLL+ YG AI P MYP SF + PSTA+VVL NL +G +++TF++++ E E + +IN+I+K+V LIFP F LGRG+MD+ N SN + L W++ G+ L ++ + ++I+ + L +++ ED DV ER+R+ + ++DVLR+ +LTK+Y + AV LC GV ECFGLLG+NGAGKTTTF Sbjct: 17 PTSDQQDTMNSSFQNSQDSDPF--CTTLIDTMVTTPSMQF-LWKNFRPLLKGKVLYTPDTPAARLLVEEANATFMALAAIKEFADSWG-EDGPFVWGFVENGTAVVNESSANSNNSSTDTPPTSEDAYNDLTHFLKLLSKV-------------LGCFELNKFEAVPTEYELVTEALEHLKNDTFWAGIVF-ENLQPNSSSIPPYLKYKIRMDVEEVQRTDK--VENRLWSPGANDNPYENLRYIWGGFAYLEDIIDHASIRLQTST-SQPLGVYVQQMPYPCYVDDPFIQSIGAILPMFLILAFMSSVAMTIKGLVLEKELRLKEVLRGVGIQNGALWSSTFTETMILLTVPCVLMSVMVKYGKVLQYSDPSVVFIFLLVFCLSTISECFLISVFFSKANLAAACGGLIYFLLYLPHVLCYAWRDVMGFQAKVGVSLLSCVAFGYGCENLSKFEEQGVGIQWHNIATSPEEGQRYTFIVSILMMLLDAAIYWVLTWYIENVFPGQYGIPRPWYFLFTYSYWFGKTSVPEDIPDNFKLLKRSSVPNEFLEKPDPNMKAGVSIRNLVKIYKTGKKVAVDGLSVDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDIRTDMDNIRKYLGMCPQHNVLFDELTVEEHIYFYGRLKGLNPSELQTEMDQMIKDVGLLHKRKDLVKNLSGGMQRKLSVAIAFVGGSKIVFLDEPTAGVDPFARRGIWDLLLKYKK-GRTIILSTHHMDEADILGDRIAIISHGKMRCCGSSIFLKKSFGSGYYLTLVRSGTEVMTAQRSGIISGIAEEKPTESDCPSSSSLDEDRGCQSSDNSNPTDLKHVTQFVRRHVPEAVFLESIGQEITFILPYARARDGTFATLFQELDKVMDKLGLTSYGVSDTTLEEIFLKVAEDTGVDKELSPTKEPVVKDYKKDSRESKRRSMSRFHGKAAKGNTKDELKKKLSNKVEDFKKSASVNGRGSVVITGWKLIRQQFLALFIKRFHHARRSRKGLIAQVVLPAIFVCLALVFSLIVPSFTDYPSLELQPWMYNSQ------TTFYSNDMPEDANVSRVVETLVDNPG-FGTRCMEGNP-IPRL---PC-SSGASDWFSPSVDQSVADIFLNGNWSMSNPSPSCQCSTPGRTIIMPDCPPGAGGL-PPPQRVQNTTDTLLNLTSINMTDFLLKTYEHSGKKRYGGI-----SVGGINSQVL------------LTEVEIEEAFANLEPPGYGDTIQKAEMVLKKLGTRNN-VKVWFYNKGWHSMVSFLSVVNNGILRGYLPEGQ-NLRQYGLSVSNHPLNLSKEQLSLSAMASTSSDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHLQFVSGVNPTVYWVASFVWDICNYVIPCFLVVGIFICFQQKAYVSPQNLPALILLLVMYGWAITPMMYPASFIFTVPSTAYVVLTCLNLFIGINGSVATFVMELFE--DESITKINNIVKQVLLIFPHFCLGRGLMDMARNQAMANVFSNFGEDRFEDPLSWNMVGKNLIAMSIQGAVMFAFTLLIQYKFFYK------PRLSLPKVQSEEKEDVDVARERQRVHEGRANNDVLRICDLTKVY--------------------PRKSTPAVYRLCVGVPAAECFGLLGINGAGKTTTF 1601 HSP 2 Score: 196.823 bits (499), Expect = 7.210e-50 Identity = 112/322 (34.78%), Postives = 173/322 (53.73%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESR--LQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 + I +L K+YP P + L + ++ LG NGAGKTTT +LTG SSG A++ IRT+M + Q +G CPQ++ + D L +H+ Y L+ + + E+ V I+ + L + N + SGG KRKLS AMA IG V+FLDEPT G+DP ARR +WD ++ R+++LT+H M+E + L R+AI+ G+ QC GS+ LK +FG+GY + + + FV+ + E+ LQ+ + L Q ++ FTE L H E+ + Y +S T+L++VF+ A + Sbjct: 1557 LRICDLTKVYPRKSTPAVYRLCVGVPAAECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTQMGDVHQNMGYCPQFDAINDLLNGREHLELYARLRGVPEEEVAMVAEWGIQKLGLVKYANKSAGTYSGGNKRKLSTAMALIGCPPVIFLDEPTTGMDPKARRFLWDCILSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFQCLGSIQHLKNRFGDGY-----TLIVRVGGCPPDLKPVEDFVEETFPGTVLKEKHHNTLQYQL-LSQEGALAKIFTE----LTDHQQELGLEDYSVSQTTLDQVFVNFAKE 1868
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Medaka
Match: abca1a (ATP-binding cassette sub-family A member 1 [Source:NCBI gene;Acc:101163147]) HSP 1 Score: 863.603 bits (2230), Expect = 0.000e+0 Identity = 603/1812 (33.28%), Postives = 931/1812 (51.38%), Query Frame = 1 Query: 274 NWLGTNLNEFHVFIGNITEIYNSLPSGALNVPKFMKWITSNPNEFIRLQNSFSYISKRIVPLISTVNKVMSENETTIESGYNELGEIICGSPE--------------NDFKLFMRNFIKNQR-------RKRSLLTCQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEW---RLHFQTFL-----LDYISNNVFINDVKKFCKAYYSANP-KICDAVNTLFNITNVKSYIDGVSKLFSW-------------IERGLNCTELDRFIPLDSLKDIDKLTNQSF-----RNFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGS-------------LVFLKRKF-------------------------GEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLI----------NKEKSYYSYYCNILKMKLRINATKTEIFLNQ---NPDQKQSKFLDQSDH----LLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWS----PASILDI--------PMVSPECDCSKTGNQI----CNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRK-----------LYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIF--XXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYN----ALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 +WL + F + + I SL +G M + + F S+ + K I+ L T N S N+ Y + I+CG PE N++K N + S C + +S + I + ++ L PL+ GK+ Y P+ ++II + N TF+ L LR W + F F+ +D + N + N F A S ++ D N L + K ++W I R + C LD+ P+ + ++L N+S + F A I+F + ++Y+IR+ + ++ T K K D +W P PR + F D +YV GF +LQ+ I+Q I VT ++ + G + MPYPCY+ D FL+ ++ +P + +AW SV ++IK +VYEKE+RLKE M++MGLNN W+SWFIS+++ L+I ++ + L++ + S VVF + + + I Q F++S FS+AN+A+ GGI+YFT Y+ +V+ + + + LLS VAF ++ +E+ G+Q+SNL +P E + + I LM+ D+ +Y ++TWY+E+VFPGQYG+ +PW F +SYW K ++++ + + N E+ E EP +++ G+ I NLVK+Y ++ L+L FYE QIT+FLGHNGAGKTTT+SILTG+F P+SGTAYIL +DIR+E+ +IRQ +G+CPQ+NVLF LTVE+HI+FY LK + + ++++ + +I+ DV L K + + LSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP+ARRGIWDLL+KYR RTIIL+THHMDEAD L DR+AIIS GKL C GS L +KR + E + L ++ + + + I + ++ +AR++E+ + T VLP F ELF LD + ++ I SYG+SDT+LEE+FLKVA+D + + + + + + LK T+ E N +P+ +++ +L +D +KG+ L +QQ +AL KR+ YA+R KGF A+++LP + + ++F I K + + P + + +F + NKL G G RCM + N C + W+ S+ DI SP C CS G + C D G PP + L NLTG N+SDYL+K + ++ K YGGF S+ S K D ++ + A+ +L+S FI L + +IW N+KG+ S+ ++ N+ L K KF GI+ N P+ + + + +++ ++I VIF +SF+PASFV+FL++ERV+ +K QF+SG+ P++YW++NF+WD+ YI+P ++IIIF+ F +Y+ S N LLL+ YG +I P MYP SFF PSTA+VVL + N+L+G ++STF+L++ N + INDILK VFLIFP F LGRG++D+ N ++++ + N L WD+ G+ LF++ + ++ + ++I+ I + S+LK I ED DV ER+R+ S D+L + LTKIY + ++ AV+ LC G+ GECFGLLGVNGAGKT+TF Sbjct: 225 DWLNKAQSHFLSNLDFLKPIRVSLSTG-------MDGVHPDSQSFFSSMKSWKDMRKEILYL--TANPTGSPNQM-----YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNDSDIEPMSIYDNSSTPYCNNLMKSLESSPISRM-IWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGMWEEMKPQFWNFMENSEEMDMVRNLLQSNVGAAFLNAQLSGTEWRVSDVANFLSKASEDKR---PAGTAYTWRDAFNESDHAIQTISRFMECVNLDKLEPV---ANEERLVNKSMSLLDNQKFWAGIVFPDIVHSDNSDLPPNVNYKIRMDIDNVERTNKIK--DGYWDPGPRADPFEDLRYVWGGFSYLQDVIEQGIIRAVTGSKE-KTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDPGVVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAKVLVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLYGIMTWYIESVFPGQYGIPRPWYFPFTKSYWCGE-KENKNMSALLSKKGNAEV---CIEEEPGHIEPGVYIENLVKVYSHGNKLAVDGLSLKFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRSELSTIRQNLGMCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKAEMEQIVNDVGLPHKRKSRTNTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKYR-QGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTMVKRDYDLALQSCRNSASTVSYSKKTEKDSISESSSDAGLGSEPDSETTTIDVSLISNVIFKHVREARLVEDLGHELTYVLPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVAEDSGVDAVELSDGVVPTRTRRRHAFGDHQSCLK-----PFTEDEFDFNDSEGDPESRETDWLGGADGKGSFQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLALHPSMYGEQF------SFISNDMPDDPHTNKLLGALMEKPG-FGSRCMKGE--PIPNTPCTAVEDE--WAVPEVSESLRDIFAKGNWTRENPSPLCQCSCEGRKRMLPECPDGAGGLPPPQV------NTLQNLTGRNVSDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSSQFLSHK------------DDIDGTAADRFFHSLSS--FIQGLDSKNNV--------KIWFNNKGWHSISSFLNVMNNGILRASLPAGKDPTKF---GITAYNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFVCFQQDAYVSSTNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGSN--EIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAM-ADALERFGENRFRSPLAWDMVGKNLFAMAVEGVVFFCITVLIQYRFC---ITTRSSISHLKPI---GEEDEDVARERQRVLSGSGQSDILELRELTKIY--------------------KRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTF 1931 HSP 2 Score: 193.741 bits (491), Expect = 6.390e-49 Identity = 102/320 (31.87%), Postives = 176/320 (55.00%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 + + L K+Y + P ++ L + + LG NGAGKT+T +LTG +SG AY+ + + TE+D + Q +G CPQ++ + D LT +H+ FY +L+ + + E+ V I+ + L + ++ + SGG RKLS A+A IG VVFLDEPT G+DP ARR +W+ ++ R+++LT+H M+E + L R+AI+ G+ +C GS+ LK +FG+GY + + + ++ F++ + + + E+ R LP + + +F L ++ + I Y +S T+L++VF+ A D Sbjct: 1887 LELRELTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSLVTSGEAYLAGKSVTTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRKLGLVKYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSIIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGY-----TIILRVAGPDPDLRPVMGFIERELPGSTLKEKHRNMLQYQLPSSLTS---LARIFSLLSKNKETLCIEDYSVSQTTLDQVFVNFAKD 2198 HSP 3 Score: 67.781 bits (164), Expect = 1.209e-10 Identity = 33/80 (41.25%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 19 ISNQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY 258 +S QL LLWKNF +RR+ LLIE+ PL + FIL +VR Y+ C F K M S G +P++ +C N C+ Sbjct: 3 VSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRMYYPPYEQHECHFPNKAMPSAGTLPWVQGIICNANNPCF 82
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Medaka
Match: zgc:172302 (ATP-binding cassette sub-family A member 1 [Source:NCBI gene;Acc:101162276]) HSP 1 Score: 840.877 bits (2171), Expect = 0.000e+0 Identity = 610/1863 (32.74%), Postives = 960/1863 (51.53%), Query Frame = 1 Query: 220 LTDFLCTFNTSCYDQT-QINWLGTNLNEFHVFIGNI-TEIYNSLPS---GALNVPKFM--KWITSNPNEFIRLQNSFSYISKRIVPLISTVNKVMS-------------ENETTIESGYNELGEIICGSPE--------------NDFK-LFMRNFIKNQRRKRSLLT---CQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTF---KILDNLRLASVEWRLHFQTFL-----------------LDYISNNVFINDVKKFCK-AYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPLDS-LKDIDK----LTNQSFRNFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLT--------------MYYSCGL----------LSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXX--------------------------------------XXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMK-LRINATKTEIFLNQNPDQKQSKFLD---QSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKM-----------GKEN-LNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWSPASILDIPMVSPECDCSKTGNQI----CNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKL-----------YGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANH---NQSNLNSL--KFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYNA------LQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLK-RIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 L D +C N S ++ + TN+ + + N+ E+ S L++ KF+ + + SN + + + S IS+ + L +++ + S E+ T ++ +I+CG PE NDFK L ++ I++ S T C+ + + + ++ + PL GK+ Y P+ +++++++ N TF ++L ++ A +E +T++ + + N N + A++ + P +T + Y D S + + + + C LD+ L+S K ID+ L N+ F + ++ N + L P +SY+IR+ + + T K K D FW P P F+D +Y+ GF+++Q+ +++A +++T + G + MPYPCY+ D FL+ L LP + +AW SV ++ KSIVYEKE+RLKE M++MGL++ W SWFIS+++ +I ++ L+ I S AVVF + + + I Q F++S FF KAN+AS GG++YF+ Y+ + +F L+ T +Y+ G+ LS VAF ++ +E+ G+Q+ NL +P E + II++ +D+FIY L WY+EAVFPG++G+ +PW F+ +YW + +P+ E N E+EP N+ LG++I NLVK+Y +N+LNL F+E QIT+FLGHNGAGKTTTIS+LTG+F P+SGT YI DIR +MD IR +G+CPQ+NVLFD LTVE+H++FYG LK + + ++++ L +++DV L K + + +LSGGM+RKLS+A+AF+G S+VV LDEPTAGVDP++RRGIWDLL+KYR RTIIL+TH+MDEA+ L DR+AIIS+GKL CCGS +FLK + G GYYL+++K + S+ +L V+ +I A ++EESR + I LPQ LDQ + E+ I SYGLSD++LEE+FL+VA++ ++ E N + R+ E P+ ++ L + L G L+ QQ+ AL IKR+ YA+R +GF A+++LP L +L +LF I + +++ PW+ + EN L + + K E S E G + P + +Q F + + P SPEC CS C + G PP + +T D L NLT YN+SDYL+K + ++ +K YGGF K+ E + D V+A + + S+L+SL K +L+ +K +W N+KG+ SM ++ N+ +N LLR+ L + +GIS N P+ + + + +++ ++ VIF +SF+PASFV+FL+EER S +K QFVSG+ P +YWV+NF+WD++ Y +P ++++IFI F +SY+ +N A ILLL+FYG +I P MYP SF + PSTA+VVL + NL +G +++TF+L++ V+ + L +IN++LKKVFLIFP F LGRG++D+ N + + H A QWD G+ LF + + + ++I I+++ LK + + ++ ED DV ER R+ S + D+L +INL+K+Y ++ AVN LC G+ GECFGLLGVNGAGKT+TF Sbjct: 192 LKDVVC--NGSLLEKMLSVEGGATNMTDLQTQLCNLPAEVLKEAESLFFSQLDLTKFITRELVVSNAEDLRVMSQAISTISQDLTVLTDSISSLSSFTEVSQALSFLTPESNTAEGERFSAFSKIMCGHPEMGGERIPSFNWYEDNDFKSLLGKDAIEDANLGLSNTTTPFCRSLIHQLESDPRSRI-VWRGIKPLFVGKLLYAPDTPAVKEVMKEVNKTFEDLQVLQDVDEAWMEVGPEIKTYMETSSDIRLLRDLLRRPEVAVLVNMRLENTPWTASQIAHFLSTPSPNAERKPGHPVTWLDLYND-FSHVTNTVAQVTKCISLDKLEGLESEAKLIDRALELLDNRQFWGGVLFLLPNSSTTELPPH----VSYKIRMDIDNVARTNKIK--DNFWDPGPAAEPFSDLRYIWGGFVYIQDLVERALNQVLTGIKQT-TGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAMITKSIVYEKEARLKETMRIMGLSSGTLWFSWFISSLIPFLISAALLIGLLKWGNILPYSDPAVVFFFLMAFATATIMQCFLISTFFCKANLASACGGLIYFSLYLPYALFTAWRDHLNSTHRILNCIFSPFIVKIYFCLGMFFFLREFLSFLSPVAFGFGCEYFAQYEEQGLGIQWFNLQSSPVEGDSYSFTTSIIMLYVDAFIYALAAWYIEAVFPGEFGIPRPWYFIFQLNYW-GGVPLEAGMPIPPAPTDQDEDN---IEAEPSNMTLGVNIRNLVKIYKKGGKLAVNHLNLKFFEGQITSFLGHNGAGKTTTISVLTGLFPPTSGTVYIKGLDIRYDMDIIRNTLGVCPQHNVLFDILTVEEHVWFYGCLKGLSEEKVKAELDNLLEDVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDLLLKYRK-GRTIILSTHYMDEAELLGDRIAIISKGKLCCCGSPLFLKSQLGSGYYLTVVKREETNPNTPSGSSFSTSTSIITNKLPHAKDSESSLSEDTGLGSDESSSCVAALLALVQQHIPSASLVEESRREAVINLPQKAAKDGSLAIFLSKLDQRLPELGISSYGLSDSTLEEIFLRVAEE---TGVDAEPEQEELSPNSQQPSGERVEEQPAE---QPEPEPLETDLLSGDCRGGEPLSGSWLMWQQLKALFIKRWLYARRSRRGFFAQIVLPALFVLVALLFSLIVPPFGRYPSVELQPWMYGEQYTFFSNDAPGNPAMENLLEALLDQPGFGTKCMEKEEGNNTSCEVEGGGQFRRPQV-SFSMWQMFSKGNWSKERP---------SPECQCSTEDVSRMLPECPEGAGGLPPPQIKRVT-GDILQNLTSYNVSDYLVKTYAQILKKSLKTKKLVNEFRYGGFSL--------GGKVTQTEVDVEHVEDAVSAFRRRYQVTQNSSLDSLLNKLPAFLEGLHSKDNVK-----VWFNNKGWHSMVSFVNVMNNGLLRASLPPGPER-SKHGISAYNHPLNLTKDQLTEVALMATSVDVLISTCVIFAMSFVPASFVLFLIEERASKAKHLQFVSGVQPLLYWVANFIWDMLNYAVPAAMVVLIFIGFQQKSYVSEQNLPALILLLLFYGWSITPLMYPASFVFTVPSTAYVVLTSINLFIGINCSMATFVLELF-VD-DNLNQINNVLKKVFLIFPHFCLGRGLIDMAKN---QAMADAFHRLGARPVLDPFQWDFVGKNLFCMAASGVFYFIFTILLQYKFFIH-----LKPWWTEPQLPPIGPEDEDVARERARVMSGKFHSDILTMINLSKVYKA--------------------GKKPAVNRLCLGIPPGECFGLLGVNGAGKTSTF 1977 HSP 2 Score: 183.726 bits (465), Expect = 7.885e-46 Identity = 99/320 (30.94%), Postives = 172/320 (53.75%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADD 3171 +++ NL K+Y + K P +N L L + LG NGAGKT+T +LTG + G A++ + TEMD + Q +G CPQ++ + D LT +H+ Y L+ + + + V ++ + LT+ + SGG KRKLS A++ IG V+FLDEPT G+DP A+R +W+ + + ++LT+H M+E + L R+AI+ G+ QC GS+ LK +FG+GY + + + S+ + +++ + + E+ + LP + + +F L + E+ + + +S T+L++VF+ A D Sbjct: 1933 LTMINLSKVYKAGKKPAVNRLCLGIPPGECFGLLGVNGAGKTSTFRMLTGDTPITHGEAFLDRHSVLTEMDRVHQLMGYCPQFDAISDLLTGREHLELYARLRGVPEESVSKVAQWGVRKLGLTQYAEQKAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCIHSVTKEGKAVVLTSHSMEECEALCTRMAIMVNGQFQCLGSVQHLKNRFGDGY---TVILRLADTKSDTESCPVDEYMTKSFPNIELKEQHQNVLQYHLPSHGCS---LALIFDALANNCEELGVADFSVSQTTLDQVFISFAKD 2246 HSP 3 Score: 67.3958 bits (163), Expect = 1.888e-10 Identity = 32/78 (41.03%), Postives = 42/78 (53.85%), Query Frame = 1 Query: 25 NQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCY 258 +QL LLWKN +RR L+IEL PL + IL AVR S YK C F K + S G +P++ +C N C+ Sbjct: 5 HQLYLLLWKNVTYRRRNKIQLIIELAWPLFLFLILIAVRQSHPPYKQGQCHFPNKALPSAGTLPWIQSIVCNVNNPCF 82
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Medaka
Match: abca4a (retinal-specific ATP-binding cassette transporter [Source:NCBI gene;Acc:101171449]) HSP 1 Score: 788.489 bits (2035), Expect = 0.000e+0 Identity = 533/1636 (32.58%), Postives = 852/1636 (52.08%), Query Frame = 1 Query: 670 MYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVN-----TLFNITNVKSYIDG-----------------VSKLFSWIERGLN----CTELDRFIPLDSLKDIDKLTNQSFR-----NFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYY---------------------------XXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMW-----SPASI--LDIP-----MVSPECDCSKTGN----QICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRK------------LYGGFQF--VLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSL-KFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFN-YFYNSNSIVKHEY--NALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 M+N + P++ G++ Y P+ +R++I+ AN TF+ L+ LR W + + + + + ++ + NP + D ++ F+ ++ +++ V K+ + R LN C LD+F+ +L D D +T ++ F A +IF + T + ++IR+ + ++ T K K DR+W P PR + D +YV GF + Q+ I+ I T E +G + MPYPCY+ D F L P +V+AW SV++++KSIV EKE RLKE +K MG+ N V W +WFI + +++ +++ + ++ S+ ++F + + + I Q F++SVFF++A +A+ GI+YFT Y+ V I + ++ M LLSQVAF +++ +E+ G+Q+ N+ +P E F I +M++D+ +Y ++ WY++ VFPGQYG+ +P+ F YW+ N K+ + L + + E + FE+EP+NL G+ I NLVK++ S P I+ L ++FYE IT+ LGHNGAGKTTT+SILTG+F P+ GTA I +DIRT+MDSIR +G+CPQ+N+LF +TV +HI F+ LLK E E + +++D+ L K + L +LSGGM+RKLS+A+AF+G ++VV LDEPT+GVDP++RR IWDLL+KYR+ RT+I++THHMDEAD LSDRVAI+SQG+L CCGS +FLK FG G+Y ++ N S N E+I+ V ++ AR++E + T +LP + R + LF+ L++ + ++ + S+G+SDTSLEE+FLKV D N+ E + Q+P Q + + + ++G L +Q +AL IKR H+A R +K F+A+++LP + F ++F I + + +SPW+ G++ TF+ E + + + G G RCM L+++ C N W +PA I L+ P SPEC CS +C + +GG P RI ++ D L +LTG NISDYL+K +PKL R YGG LP I D +L +N + +++ L + F+ YL+ + ++W N+KG+ +M ++ N+ +N +LR+ L + A ++GI+V N P+ + + V ++ +A+ VIF +SF+PASFV++L++ERV+ +K QFVSG++P VYW++NFLWD++ Y I +++ IF+ FD + Y + N A I LL+ YG ++ P MYP S+ S PSTA+V L+ NL +G ++ + LGRG++D+ N + + +Y + W G LF + + ++I+ I+I+ R + L+ ED DV ER+R+ ++D+LR+ +L+K Y + AV+ +C GV GECFGL+GVNGAGKTTTF Sbjct: 384 MWNSVKPMLMGRILYAPDSPAVRRVIKNANTTFEELERLRTMGKAWE-EVAPQIWAFFQDGIQVEMIRDIIR-----NPSVMDFIDKSLEDAPFSSKHILNFLRNEPLEDRPYDVPNFDWRDVFKMIDRVIRMLNQYGDCVVLDKFV---ALPDEDAVTYRALNLLEDGKFWAGLIFVNMHPWTT-SVPPHIKFKIRMDIDIVERTNKVK--DRYWDPGPRADPMEDLRYVWGGFAYFQDIIEHGIIRTHTGKE-WPLGVYLQQMPYPCYVDDLFTLTLNRCFPVFMVLAWVYSVSMVVKSIVLEKELRLKETLKTMGVTNGVIWSTWFIDSFIMMGTSTALLTAIIMGGRVLNYSNPFILFLFLLTFTTATIMQCFLLSVFFNQAKLAAACCGIIYFTLYLPHVFCIAWQDRITKDMKILLSLLSQVAFGFGTEYLSRYEEQGMGLQWDNIQTSPLEGDEFSFLTSICMMVLDTVLYSVLAWYLDNVFPGQYGIGRPFYFPLLPCYWL-NKKNRKKRILKKILEKVSEQDMSFFEAEPDNLVKGVCIENLVKVFSSCVRPAIDGLTISFYEGHITSLLGHNGAGKTTTMSILTGLFPPTCGTATIYGKDIRTDMDSIRLSLGMCPQHNILF-HMTVAEHILFFSLLKGCPIAEAEEEVENMLQDLGLPHKRDELIQNLSGGMQRKLSVALAFVGGAKVVVLDEPTSGVDPYSRRSIWDLLLKYRT-GRTVIMSTHHMDEADLLSDRVAILSQGRLYCCGSPIFLKNCFGAGFYLTLVRRMKNDPPKVGRKPPVCFCAFKARAVSSNSKTAFLSTGNIESIMALVHHHVPQARLIETIGQELTFLLPNQNFQPRAYASLFRELEETLVDIGLSSFGVSDTSLEEIFLKVTADGTNRKCIPESN------------------------GQDPSQIKEGSAGRGSYRVRGVCLTVKQFLALLIKRLHHATRSYKDFVAQIVLPASFVFFSLMFNLIVPPFGEYPSLTLSPWM----YGRQ--YTFFSNERPTDAAMRYFGNVLLDKPG-FGTRCMVDE--PLEDFPC--NNITTEWEMPLVNPALIEMLESPRWDSLRPSPECQCSTAKKLTMLPVCPE-GAGGLPPPQRIQSTGDVLMDLTGRNISDYLVKTYPKLIRTREVKQVFCSVMFRYGGISVGGQLP-VLSLQPNAIQD--LASQLGQLLNVTGGKYSKQTLRDIGTFLRYLETPNNV--------KVWYNNKGWHAMVSFMNVANNAILRAHLPERA-NLDEFGITVINHPLNLTKEQLSEITVLSTSVDAVVAMCVIFAMSFVPASFVLYLIQERVTQAKHLQFVSGVSPLVYWMANFLWDMVNYSISAAMVVQIFLFFDKKCYTSATNVQALIALLMLYGWSVTPMMYPMSYVFSVPSTAYVSLSCINLFIGINSS-------------------------------HYCLGRGLIDMAMNQAVTDVYARFGEDYSPDPFSWVFIGRNLFCMAAEGFVYFIINILIQY----RFFMDHWQPHILE-------EDVDVAEERKRIQQSGNTNDILRIKDLSKTYTGTII--------------------PAVDRICVGVLPGECFGLVGVNGAGKTTTF 1893 HSP 2 Score: 167.162 bits (422), Expect = 7.270e-41 Identity = 80/228 (35.09%), Postives = 132/228 (57.89%), Query Frame = 1 Query: 2212 ISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGY 2895 + I +L K Y IP ++ + + + +G NGAGKTTT +LTG +SG A + I T + + Q +G CPQ++ + + LT +H++ Y L+ + +++I V I+ + L+E + + SGG +RKLS A+A IG +V LDEPT G+DP +RR +W+ ++ R ++LT+H M+E + L R+AI+ G +C G++ LK K+G+GY Sbjct: 1849 LRIKDLSKTYTGTIIPAVDRICVGVLPGECFGLVGVNGAGKTTTFKMLTGDIDVTSGDASVAGHSILTNILDVHQNMGYCPQFDAIDELLTGREHLHLYARLRGVPESQISRVADWAIQKLGLSEYASRTAGTYSGGNRRKLSTAIAMIGCPALVLLDEPTTGMDPLSRRFLWNSIMSVIQDGRAVVLTSHSMEECEALCTRLAIMVNGSFKCLGTIQHLKYKYGDGY 2076 HSP 3 Score: 54.6842 bits (130), Expect = 1.073e-6 Identity = 24/81 (29.63%), Postives = 40/81 (49.38%), Query Frame = 1 Query: 22 SNQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQ 264 Q+R LLWKN+ ++RR+ +E+ P+++ L +R Y+ C F K M S G +P++ C N C+ Sbjct: 4 GGQVRLLLWKNWTIRRRQRMRFFVEIMWPVMLFIGLVWLRRVNPLYRQHECHFPNKAMPSAGVLPWIQGIFCNANNPCFQH 84
BLAST of ATP binding cassette subfamily A member 1 vs. Planmine SMEST
Match: SMESG000029537.1 (SMESG000029537.1) HSP 1 Score: 2964.87 bits (7685), Expect = 0.000e+0 Identity = 1565/1729 (90.51%), Postives = 1629/1729 (94.22%), Query Frame = 1 Query: 115 MVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQTQINWLGTNLNEFHVFIGNITEIYNSLPSGALNVPKFMKWITSNPNEFIRLQNSFSYISKRIVPLISTVNKVMSENETTIESGYNELGEIICGSPENDFKLFMRNFIKNQRRKRSLLTCQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSFRNFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWSPASILDIPMVSPECDCSKTGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 MVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQTQINWLGTNLNEFHVFIGNITEIYNSLPSGALNVPKFMKWITSNPNEFIRLQNSFSYISKRI+PLISTVNKVMSENETTIESGYNELGEIICGSPENDFKLFMRNFIKNQRRKRSLLTCQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSFRNFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAVVFAVIFFYVISFICQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYLSLLKNQNNHSNSNRNGENILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAELILPVLMILFIILFLKISILPKKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWSPASILDIPMVSPECDCSKTGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNF +LSRK++GG+QF+LP+ F SSKLI SP W+ +RD VN SQ NL L+F+ Y Q+ F +F+RIW NSKGY SMPAYANI SNLLLRSR+ S + +YGISV+N+PI + TK N ++LE++LAI+VI LSFI ASFVIFL++ER+SGSKRQQFVSGINPYVYWVSNFLWDIMKYIIPIIIIIIIFIAFDYQSYI SKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVG+ITT+STFILDI+E E + N+ILKKVFLIFPQ++LGRG++DL NY + + +Y+A W++A EKL SL L + WWI+LIIIE G++NR++ LK SY +I+ TEDFD++LE+ RM+S+QK DDVL+VINLTKIYN F+ C K K+N ++N+ ++ AVNNLCFGVREGECFGLLGVNGAGKTTTF Sbjct: 1 MVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQTQINWLGTNLNEFHVFIGNITEIYNSLPSGALNVPKFMKWITSNPNEFIRLQNSFSYISKRIIPLISTVNKVMSENETTIESGYNELGEIICGSPENDFKLFMRNFIKNQRRKRSLLTCQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSFRNFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAVVFAVIFFYVISFICQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYLSLLKNQNNHSNSNRNGENILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAELILPVLMILFIILFLKISILPKKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWSPASILDIPMVSPECDCSKTGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFQRLSRKIFGGYQFLLPNDFAQSSKLIAQSPTWDGIRDSVNQSQP----QNLEPLRFLKYFQEFFNKSSKTMNFSRIWINSKGYASMPAYANILSNLLLRSRIKLSQNSW-NYGISVTNYPIA-DSETKISQFNNLILLEVTLAIYVILALSFISASFVIFLIDERISGSKRQQFVSGINPYVYWVSNFLWDIMKYIIPIIIIIIIFIAFDYQSYIGSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGSITTMSTFILDIIEDTDETFRPTNEILKKVFLIFPQYDLGRGMIDLSSNYIKYNMTDGYAKYDAFDWEVASEKLASLILLFLLWWIILIIIERGVINRVLYRMLKVSYFNN-KIKKTEDFDISLEKNRMNSEQKFDDVLQVINLTKIYNRTFNFRSVCC-KNKNNDVENENQKFAVNNLCFGVREGECFGLLGVNGAGKTTTF 1721 HSP 2 Score: 187.963 bits (476), Expect = 2.337e-47 Identity = 106/304 (34.87%), Postives = 177/304 (58.22%), Query Frame = 1 Query: 2260 VINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDR-TIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSR-KFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 3165 +NNL E + LG NGAGKTTT +LTG + G A+I I +++ + +G CPQ++ L LT E+ + FY ++ ++ N+I+SV+ ++++ LT L+ +LSGG KRKLS A+A IGN +V+FLDEPT+G+D ARR +W+++ K + ++ +ILT+H+M+E + L R++I+ G+++C GS+ LK KFG+ YY+ + + +N VK I +A + + S Q S+ + +LF+ +Q A +I+ Y +S +LE+VF+ +A Sbjct: 1693 AVNNLCFGVREGECFGLLGVNGAGKTTTFKMLTGEEEITHGNAFINGHSIISDIIGAHRNMGFCPQFDALHALLTCEEQLIFYCRIRGIESNQIKSVVDTSLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEK------VKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 1990
BLAST of ATP binding cassette subfamily A member 1 vs. Planmine SMEST
Match: SMESG000029534.1 (SMESG000029534.1) HSP 1 Score: 2249.94 bits (5829), Expect = 0.000e+0 Identity = 1202/1814 (66.26%), Postives = 1426/1814 (78.61%), Query Frame = 1 Query: 7 MNSLISNQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQTQINWLG--TNLNEFHVFIGNITEIYNSLPSGALNVPKFMKWITSNPNEFIRLQNSFSYISKRIVPLISTVNKVMSENETTIESGYNELGEIICGSPENDFKLFMRNF----IKN---------QRRKRSLLTCQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKA-YYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSFRNFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMR--NNNQNCEINHQA---FESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXX-----XXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKEKSYYSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQS---------DHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENI-------SLG-------LINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWSPASILDIPMVSPECDCSKTGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 MNS+ + QL+ LLWKNFRLK+RK L+ E+ VPL+++ I+ VR+S K+KMD C FKEK M SMG +PF+ DF CTFNT+CY++TQINW +++ F +F N+ +Y +LP L V + W T + E +L ++ I K + PLI+++ + +EN T + ++ ++ CGS ENDF F F KN Q S +TC+ F++FF NS ++ ++ +FGK+++ PN + R+I+ +AN+TF+ LD +RLAS+EWRLHF+ ++ + ++N+ IN++K CK+ Y+ + +C+ VN + N ++S ++ +S +FS++E+ LNCTEL++F+P++ ++ Q ++ AV++ N+TF+YLTP N TFL+YQIRIP S+IDST FKV D+FWT PRR T DFKY SGF+ LQEAID+AFIE+VTNNE+I+VGSSM IMPYPCY+ D F++ + N++PF+LV+AW PSVT LIKSIVYEKE RLKE+M+VMGL N VHW+ WF+ST+VVLI PV IMS+ L S I + S AVVF V+ YV+SFICQ FM+S+FF+ AN+ASV+GG++YF YM FVVFI+++ +LS YY GL +QVAF NA+ F+ YWEQ EG F NLF L FGVGHC++++I+DS +YL + WYVE+VFPGQYGV K W FL R+YW ++ E+I L NN++ I++ + FE+E +L++GISI NLVK YP K ++NLNLNFY+SQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIR++MD IR+K+GLCPQ+N+LF +LTVEDHIYFYGLLK M EI VLP IIKDV LT K+N LS LSGGMKRKLS+A+AFIG+ +VFLDEPTAGVDPFARRGIWDLLIKYR+ +RTIILTTH MDEADYLSDR+AIISQGKLQCCGS VFLKRKFG+GY L L+KN N + +G+ +L+F+K +I DA+M E+ QW+ VLPQND NS KF+ LF NLD+ + ++ +SYGLSDTSLEEVF++VADDP K+ + K+ N+ ++ + + E FL+ D Q F+D+S LL+GFPLL+QQII L IKR+HYAKR+ KG AELILP+LMI +I LK+ + M+ISPWLMM K NLNTFYRKEN LG L ++LESEYRSDLGESGIRCMNPSIYR +Y+CF +NN WSP +IP++SPECDC+ TG QICND RSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNF KLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIW NSKGYVSMPAYANIFSNLLLRSRLNKSAVKFIDYGISVSNFPIEMEQSTKFLDLV QMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYIIPIIIIIIIFIAFDYQSYI SKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLN YNLLVGTITTISTFILDILE NYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF Sbjct: 1 MNSIFTKQLKVLLWKNFRLKKRKPITLISEILVPLLIIIIIVPVRNSIFKFKMDHCEFKEKSMASMGFVPFILDFFCTFNTTCYNKTQINWNENYSSIYAFKMFTKNLYNVYQTLPKEKLTVNSLITWATIHKFEIDQLISNIMPIIKLLSPLIASLKEADTENLTASKPIIIQIFKVFCGSDENDFTEFYYKFSSISTKNVSGQTNAGSQFMNESNVTCERNFENFFGNS----NIFGTISSWVFGKIYFSPNSPLTREIMRRANITFETLDYIRLASIEWRLHFRDWINEAVNNSKLINELKS-CKSWYFYFDNNLCETVNAVLNFQTIQSILNKISLMFSFLEKTLNCTELNKFVPINESITVENFIKQPIKSVFAVLVINDTFRYLTPSNATFLNYQIRIPESQIDSTKHFKVTDKFWTAEPRRETLRDFKYYTSGFLLLQEAIDRAFIEIVTNNETIDVGSSMQIMPYPCYVDDMFIRFITNMMPFMLVIAWVPSVTGLIKSIVYEKERRLKEFMRVMGLGNSVHWIGWFLSTVVVLIFPVTIMSLLLIYSSILSFSCFAVVFLVLLLYVVSFICQVFMISLFFNNANLASVAGGVIYFILYMPFVVFIRMQSDLSTGFYYLGGLSAQVAFCNAINFIGYWEQSTEGAHFGNLFDGAIIDLKFGVGHCMLMLIVDSVLYLSVAWYVESVFPGQYGVGKAWYFLFTRNYW----RAKENISLAHDINNSEPLIIDYDSEGNFENEYTDLRVGISIRNLVKTYPGAKTRAVDNLNLNFYQSQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRSDMDKIREKMGLCPQHNILFSNLTVEDHIYFYGLLKGMKVKEIRQVLPIIIKDVGLTAKVNTLSKKLSGGMKRKLSLALAFIGDPSIVFLDEPTAGVDPFARRGIWDLLIKYRNDERTIILTTHQMDEADYLSDRIAIISQGKLQCCGSSVFLKRKFGDGYRLILVKNFNAQKENFRKGISNSGDKLLQFIKSHIPDAKMETETMTQWSFVLPQNDSNSCKFSGLFVNLDEEIDNLNALSYGLSDTSLEEVFIRVADDPA-KINEETKNEKLIPDNLNRIAVYGDIENQEPFLDLE-DLNQQAFVDKSLISLNFNRNHKLLRGFPLLKQQIIGLQIKRFHYAKRNKKGIFAELILPILMITLMIALLKLVNPLESLPAMEISPWLMMPKSRSINLNTFYRKENQLNFSITNQLGNKNSINPLTDRLESEYRSDLGESGIRCMNPSIYRSTHYRCFPEYKNNKWSPIPNGNIPLISPECDCNTTGYQICNDPRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFRKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWVNSKGYVSMPAYANIFSNLLLRSRLNKSAVKFIDYGISVSNFPIEMEQSTKFLDLVIQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYIIPIIIIIIIFIAFDYQSYIGSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNVYNLLVGTITTISTFILDILEGNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 1803 HSP 2 Score: 183.726 bits (465), Expect = 5.044e-46 Identity = 104/318 (32.70%), Postives = 172/318 (54.09%), Query Frame = 1 Query: 2260 VINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDR-TIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQN-------------------DINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVF 3153 +NNL E + LG NGAGKTTT +LTG + G A+I + I ++M + +G CPQ++ L LT E+ + FY ++ ++ N+I+SV+ +K++ LT L+ +LSGG KRKLS A+A IGN +V+FLDEPT+G+D ARR +W+++ K + ++ +ILT+H+M+E + L R++I+ G+++C GS+ LK KFG+ YY VKI++ + RL+ + + N D++ K +++F + + II + + TSL+E+F Sbjct: 1775 AVNNLCFGVREGECFGLLGVNGAGKTTTFKMLTGEEEITHGNAFINGQSIISDMIGAHRNMGFCPQFDALHALLTCEEQLTFYCRIRGIESNQIKSVVDTSLKNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDNYY-----------------------VKIHLYSRKCQISHRLEVKLAIENNFRSGISIKDENFLTLLYTFDLSFIKLSDIFTFFHKMKVDGLIIDFTVYQTSLDEIF 2069
BLAST of ATP binding cassette subfamily A member 1 vs. Planmine SMEST
Match: SMESG000032861.1 (SMESG000032861.1) HSP 1 Score: 1911.73 bits (4951), Expect = 0.000e+0 Identity = 1004/1743 (57.60%), Postives = 1302/1743 (74.70%), Query Frame = 1 Query: 163 MDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQTQINWLGTNLNEFHVFIGNITEIYNSLPSGALNVPKFMKWITSNPNEFIRLQNSFSYISKRIVPLISTVNKVMSENETTIESGYNELGEIICGSPENDFKLFMRNFIKNQRRKRSLLTCQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSFRNFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELV-TNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNN----------NQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXX-----XXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPM-------NKLINKEK-SYYSYYCNILKMKLRINATKTEIF-----LNQNPDQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWSPASILDIPMVSPECDCSKTGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNT-EDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 MDLC +EK+M SMGPIPFL DFLCT NT+CY++TQI+W G N N+F F+ N+T +Y+ N P + T PN+ +L S +Y++ PL+ + ++ S N+T + G + ICGS END LF+ +F+ NQ+ KRSL +CQ F +S ++Y ++APLIFGK++Y P+ R++I++AN TFKILD+LRL++VEWRLHF ++ ++Y++N+ IN+++ FCK ++C VNT ++ N+ +Y +S +F+ IE LNCTEL++F+P+ S DID L NQS N A ++ NE+FQYLT N TFLSYQIR+P +RID+T KFKV+D FWTP PR +TF+DFKY SGF+ LQEA+DQAFIE+V TNNESI VGSSM IMPYPCY+ DKF++ L++++PFLL++AW PSVT+L+K IVYEKE+RLKE+M+VMGL+N VHW+ WFI+TI +L++P++IM++ LR S I SS AVVF ++ YV+SFICQ+FM+SVFF KANVA+V+GGI+YF Y+ F VFI + +++ +MYY GLL+QVAFSN++ F+ +WEQ +GVQFSNLF + +L GVGHC+++M +DS IYLLI WYVE+VFPGQYGV KPW FL + YW N S + P+ +N N N I FESEP NLK+GISI NLVK YP K +++LNLNFY+SQITAFLGHNGAGKTTTISILTGIFS +SGTAYILNEDIR++MD IR+K+GLCPQ+N+LF +LTVEDHIYFYGLLK M EI +LP+II+DV LT+K+ + S +LSGGMKRKLS+AMAFIG+S+VVFLDEPTAGVDPFARRGIWDLLIKYR+ +RTIILTTHHMDEADYLSDR+AIISQGKLQCCGS VFLK++FG+GYYL L+KN + S + +GE +L F++ +I DA+M+EE+R QWTIVLPQN+INS KF++LF ++D+ ++ ++I+SYGLSDTSLEEVFLKVADDP +K I E + N + R++ F LN P + + LL G LL+QQ++ L +KR+HY KR+ KGF+AEL+LP+L+I+ +I F KIS Q PM+ISPWLMM K NLNTFYRKEN S LI+KL YRSDL E+G RCMN S+YRLD+Y C + N W+ IP+++ CDC+ TG Q+C++ SGGP NSYR+M S+DKLNNLTGYNISD+L+K F +K YGGFQF+LPS FG S KLIG P W+ +R + S ++++ SN + L F++Y Q+ F + GIKT+FTRIW NSKGY S+PAY NIFSNLL+R+R + +YGISV+N+P++ QS L QM +E+SLA+FVIFGLSFIPASFVIFL+EER++GSKRQQ VSG+NPYVYW+SNFLWDI+KYI+PI II++IF+AFDYQSYI SKN AFI LLIFYGLAIIPHMYPFSF +STPSTAFVVL+AYNLL+G+ITTISTF LD+L+ + E LK +ND+LKKVFL+FPQ+ LGRG+MDL FNY + S K +Y+ W GEKL SL L +GWWIV+ IIESGI+NR++CGK+KN LK E+++ ED DV +ERER+ S++ SDDVL+VI LTK+YN L K+ C +K + ++N+ R++AVNNLCFGV+EGECFGLLGVNGAGKTTTF Sbjct: 1 MDLCELREKQMASMGPIPFLRDFLCTLNTTCYNKTQIDWSGNNTNDFQTFLNNMTYLYD-----VFNKP----FPTPTPNDITQLTYSLNYLNSSTYPLLVAMMQIQSGNKTESDKGMKTIEASICGSSENDMNLFVNSFVTNQKSKRSLQSCQNQFLQTLGSSSYGSQLYEVIAPLIFGKIYYTPDSPFTRELIKRANSTFKILDDLRLSAVEWRLHFSSYFVNYMNNSQPINNLRNFCKLNIPGTQQMCSTVNTTLDMENILAYNAAISAVFAIIENSLNCTELNKFVPMKSSIDIDNLANQSLTNIYAGLVINESFQYLTRNNATFLSYQIRMPTNRIDTTLKFKVIDSFWTPAPRISTFSDFKYYTSGFMLLQEALDQAFIEIVSTNNESINVGSSMQIMPYPCYVNDKFIKFLSSMMPFLLIIAWMPSVTILLKGIVYEKENRLKEFMQVMGLSNLVHWIGWFITTISILMLPIIIMTLILRYSTILGFSSPAVVFLILLSYVVSFICQSFMISVFFDKANVAAVAGGIIYFISYLPFYVFITIPDDVTDSMYYGVGLLTQVAFSNSINFIAFWEQSTDGVQFSNLFDSTVVNLNVGVGHCMVMMWVDSVIYLLIAWYVESVFPGQYGVGKPWYFLFTQHYWCQNSASYKITPI--DNYYPYESSPIPNINEGILKHGFESEPTNLKVGISIKNLVKTYPGAKTRAVDDLNLNFYQSQITAFLGHNGAGKTTTISILTGIFSATSGTAYILNEDIRSDMDKIREKMGLCPQHNILFSNLTVEDHIYFYGLLKGMKTEEIREILPKIIEDVGLTKKMKSFSKNLSGGMKRKLSVAMAFIGDSKVVFLDEPTAGVDPFARRGIWDLLIKYRNDERTIILTTHHMDEADYLSDRIAIISQGKLQCCGSSVFLKKEFGDGYYLILVKNSRSQEEDFRSGISSSGEKVLNFIRAHITDAKMIEETRTQWTIVLPQNEINSGKFSDLFADIDRSLSGLNIVSYGLSDTSLEEVFLKVADDPAGTVEEIKDKQITAEDLDSLTDDGNFPRPSSRLSFRCKREFPRFDDLNSIPYESGAP-----SSLLTGSALLRQQLLGLQVKRFHYTKRNIKGFVAELVLPILLIVVMIAFSKISSNLNYQPPMEISPWLMMPKARSLNLNTFYRKENSSNTLIDKLVEGYRSDLSEAGTRCMNQSVYRLDSYPC-SSSIGNQWTGNPPEPIPLLTAACDCNTTGFQLCSNSSSGGPQNSYRLMASTDKLNNLTGYNISDHLIKKFKSYIKKQYGGFQFLLPSPFGQSCKLIGSLPIWDAMR---SQSNSSNSSSNSDQLPFLNYFQEFFNLSGIKTNFTRIWINSKGYASLPAYGNIFSNLLMRTRFESNGS---NYGISVANYPLKYTQSDLLSKLNTQMFVEVSLAVFVIFGLSFIPASFVIFLIEERITGSKRQQIVSGVNPYVYWMSNFLWDILKYIVPIFIIVLIFVAFDYQSYIGSKNLGAFITLLIFYGLAIIPHMYPFSFLLSTPSTAFVVLDAYNLLLGSITTISTFFLDLLQQDDETLKPVNDVLKKVFLLFPQYGLGRGMMDLSFNYLTFNISNGKQDYDPFGWSTTGEKLCSLSVLFVGWWIVVFIIESGIINRMLCGKIKNRNLKAKEMKDEFEDVDVAVERERIISEKISDDVLKVIKLTKVYNQSLNVKNTCCKKVVKDTLENEKRKLAVNNLCFGVQEGECFGLLGVNGAGKTTTF 1720 HSP 2 Score: 189.889 bits (481), Expect = 6.986e-48 Identity = 110/314 (35.03%), Postives = 180/314 (57.32%), Query Frame = 1 Query: 2260 VINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDR-TIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDI-NSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA--DDPMNKLI 3189 +NNL E + LG NGAGKTTT +LTG + G A+I + I ++M + +G CPQ++ L LT E+ + FY ++ + N+I+SV+ R ++++ LT L+ +LSGG KRKLS A+A IGN +V+FLDEPT+G+D ARR +W+++ K + ++ +ILT+H+M+E + L R++I+ G+++C GS+ LK KFG+ YY+++ ++ VK I D E S + + V Q +S K +F + + I+ Y +S T+L++VF+ A D P+ L+ Sbjct: 1692 AVNNLCFGVQEGECFGLLGVNGAGKTTTFKMLTGEEEITHGNAFINGQSIISDMIGAHRNMGFCPQFDALHALLTCEEQLTFYCRIRGIKSNQIKSVVDRSLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVTIRMPFGKDHENDNEK------VKAIIEDKFPSEVSFVDGSFVTLQYRFASSTKLAVIFDFFENLKKDSIILDYSVSQTTLDDVFINFARDDKPVKSLV 1999
BLAST of ATP binding cassette subfamily A member 1 vs. Planmine SMEST
Match: SMESG000032891.1 (SMESG000032891.1) HSP 1 Score: 1903.64 bits (4930), Expect = 0.000e+0 Identity = 1001/1732 (57.79%), Postives = 1291/1732 (74.54%), Query Frame = 1 Query: 193 MVSMGPIPFLTDFLCTFNTSCYDQTQINWLGTNLNEFHVFIGNITEIYNSLPSGALNVPKFMKWITSNPNEFIRLQNSFSYISKRIVPLISTVNKVMSENETTIESGYNELGEIICGSPENDFKLFMRNFIKNQRRKRSLLTCQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSFRNFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELV-TNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNN---------NQNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXX-----XXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMN--------KLINKEKSYYSYYCNILKMKLRINATKTEIF-----LNQNPDQKQSKFLDQSDHLLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWSPASILDIPMVSPECDCSKTGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNT-EDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 M SMGPIPFL DFLCT NT+CY++TQI+W G N N+F F+ N+T +Y+ N P + T PN+ I+L S +Y++ PL+ + ++ S N+T + G + ICGS END LF+++F+ NQ+ KRSL +CQ F +S +MY +LAPLIFGK++Y P+ R++I++AN TFKILD+LRL++VEWRLHF ++ ++Y++N+ IN+++ FCK ++C +N ++ N+ +Y +S +F+ IE LNCTEL++F+P+ S DID L NQS N A ++ NE+FQYLT N TFLSYQIR+P +RID+T KFKVLD +WTP PR NT TDFKY SGF+ LQEA+DQAFIE+V TNNESI VGSSM IMPYPCY+ D F + L+ ++PFLL++AW PSVT+L+K IVYEKE+RLKE+M+VMGL+N VHW+ WFI+TI +L++P++IM++ LR KI A SS AV+F ++ YV+SFICQ+FM+SV F KANVASV+GGI+YF Y+ F VF+ L +++ +MYY GLL+QVAF N++ F+ +WEQ +GVQFSNLF + +L GVGHC+++M +DS IYLLI WYVE+VFPGQYGV KPW FL R YW N +S+ I L+ N+ N N I FESEP NLK+GISI NLVK YP K +++LNLNFY+SQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNED+R++MD IR+K+GLCPQ+N+LF +LTVEDHIYFYGLLK M EI +LP+II+DV LT+K+ + S +LSGGMKRKLSIAMAFIG+S+VVFLDEPTAGVDPFARRGIW+LLIKYR+ +RTIILTTHHMDEADYLSDR+AIISQGKLQCCGS VFLK++FG+GYYL L+KN + S + +GE +L F++ +I DA+M+EE+R QWTIVL QN+IN+ KF++LF ++D+ ++ ++I+SYGLSDTSLEEVFLKVADDP ++ ++ + N + R++ F LN P + + LL G LL QQ++ L +KR+HY KR+ KGF+AEL+LP+L+I+ +I F KIS Q PM+ISPWLMM K NLNTFYRKEN S LI+KL YRSDL E+G RCMN S+YRLD+Y C R N W+ IP+++ CDC KTG Q+C++ SGGP NSYR+M S+DKLNNLTGYNISD+L+K F +K YGG+QF+LPS FG S KLIG P W+ +R + S ++++ SN + L F++Y Q+ F + GIKT+FTRIW NSKGY S+PAY NIFSNLLLR+R + +YGISV+N+P++ QS L QM +E+SLA+FVIFGLSFIPASFVIFL+EER++GSKRQQ VSG+NPYVYW+SNFLWDI+KYI+PI II++IF+AFDYQSYI SKN AFI LLIFYGLAIIPHMYPFSF +STPSTAFVVL+AYNLLVG+ITTISTF LD+L+ + E LK +ND+LKKVFL+FPQ+ LGRG+MDL FNY + S K +Y+ W GEKL SL L +GWWIV++IIESGI+NR +CGK+KN LK EI++ ED DV +ERER+ S++ SDDVL+VI LTK+YN L K+ C +K + ++N+ R++AVNNLCFGVREGECFGLLGVNGAGKTTTF Sbjct: 1 MASMGPIPFLRDFLCTLNTTCYNKTQIDWSGNNTNDFQTFLNNMTYLYD-----VFNKP----FPTPTPNDIIQLTYSLNYLNSSTYPLLVAMMQIQSGNKTESDKGMKTIEASICGSSENDMNLFVKSFVNNQKSKRSLQSCQNQFIQTLGSSSYGSQMYQVLAPLIFGKIYYTPDSPFTRELIKRANSTFKILDDLRLSAVEWRLHFSSYFVNYMNNSQPINNLRNFCKLNIPGTQQMCIYLNATLDMENILAYNAAISAVFAIIENSLNCTELNKFVPMKSSIDIDNLANQSLTNIYAGLVINESFQYLTRNNATFLSYQIRMPTNRIDTTLKFKVLDSYWTPAPRINTLTDFKYYTSGFMLLQEALDQAFIEIVSTNNESITVGSSMQIMPYPCYVNDNFNKFLSGMMPFLLIIAWMPSVTILLKGIVYEKENRLKEFMQVMGLSNLVHWIGWFITTISILMLPIIIMTLILRYGKILAFSSPAVIFLILLSYVVSFICQSFMISVLFDKANVASVAGGIIYFISYLPFYVFLNLPDDVTDSMYYGVGLLTQVAFCNSINFIAFWEQSTDGVQFSNLFDSTVVNLNVGVGHCMVMMWVDSVIYLLIAWYVESVFPGQYGVGKPWYFLFTRHYWCQN-SASDKITLIDNHYSYESLPIPNINEGILKHGFESEPTNLKVGISIKNLVKTYPGAKTRAVDDLNLNFYQSQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDLRSDMDKIREKMGLCPQHNILFSNLTVEDHIYFYGLLKGMKTEEIREILPKIIEDVGLTKKMKSFSKNLSGGMKRKLSIAMAFIGDSKVVFLDEPTAGVDPFARRGIWNLLIKYRNDERTIILTTHHMDEADYLSDRIAIISQGKLQCCGSSVFLKKEFGDGYYLILVKNSRSQEEDFRSGISSSGEKVLNFIRAHITDAKMIEETRTQWTIVLSQNEINNGKFSDLFADIDRSLSGLNIVSYGLSDTSLEEVFLKVADDPAGTVEEIKDKQITTEDLDSLTDDGNFPRPSSRLSFRDKREFPRFDDLNSIPYESGAP-----SSLLTGSALLCQQLLGLQVKRFHYTKRNIKGFVAELVLPILLIVIMIAFSKISSNLNYQPPMEISPWLMMPKARSLNLNTFYRKENSSNTLIDKLVEGYRSDLSEAGTRCMNQSVYRLDSYPCSSRT-GNQWTGNPPEPIPLLTAACDCKKTGYQMCSNSSSGGPQNSYRLMASTDKLNNLTGYNISDHLIKKFKSYIKKQYGGYQFLLPSPFGQSCKLIGSLPIWDAIR---SQSNSSNSSSNSDQLPFLNYFQEFFNLSGIKTNFTRIWINSKGYASLPAYGNIFSNLLLRTRFESNGS---NYGISVANYPLKYTQSDLLSKLNTQMFIEVSLAVFVIFGLSFIPASFVIFLIEERITGSKRQQIVSGVNPYVYWMSNFLWDILKYIVPIFIIVLIFVAFDYQSYIGSKNLGAFITLLIFYGLAIIPHMYPFSFLLSTPSTAFVVLDAYNLLVGSITTISTFFLDLLQKDDETLKPVNDVLKKVFLLFPQYGLGRGMMDLSFNYLTFNISNGKQDYDPFGWSTTGEKLCSLSVLFVGWWIVVLIIESGIINRTLCGKIKNRNLKAKEIKDEFEDVDVAVERERIISEKISDDVLKVIKLTKVYNQSLNVKNTCCKKVVKDALENEKRKLAVNNLCFGVREGECFGLLGVNGAGKTTTF 1710 HSP 2 Score: 188.348 bits (477), Expect = 1.795e-47 Identity = 110/314 (35.03%), Postives = 180/314 (57.32%), Query Frame = 1 Query: 2260 VINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDR-TIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVKIYIADARMMEESRLQWTIVLPQNDI-NSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA--DDPMNKLI 3189 +NNL E + LG NGAGKTTT +LTG + G A+I + I ++M + +G CPQ++ L LT E+ + FY ++ ++ N+I+SV+ ++++ LT L+ +LSGG KRKLS A+A IGN +V+FLDEPT+G+D ARR +W+++ K + ++ +ILT+H+M+E + L R++I+ G+++C GS+ LK KFG+ YY+++ ++ VK I D E S + + V Q +S K +F + + I+ Y +S T+L++VF+ A D P+ LI Sbjct: 1682 AVNNLCFGVREGECFGLLGVNGAGKTTTFKMLTGEEEITRGNAFINGQSIISDMIGAHRNMGFCPQFDALHALLTCEEQLTFYCRIRGIESNQIKSVVDTSLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVTIRMPFGKDHANDNGK------VKAIIEDKFPSEVSFVDGSFVTLQYRFASSTKLAVIFDFFENLKKDSIILDYSVSQTTLDDVFINFARDDKPVKSLI 1989
BLAST of ATP binding cassette subfamily A member 1 vs. Planmine SMEST
Match: SMESG000068605.1 (SMESG000068605.1) HSP 1 Score: 1896.32 bits (4911), Expect = 0.000e+0 Identity = 997/1762 (56.58%), Postives = 1304/1762 (74.01%), Query Frame = 1 Query: 97 LTVPLIMVFILFAVRSSQAKYKMDLCSFKEKRMVSMGPIPFLTDFLCTFNTSCYDQTQINWLGTNLNEFHVFIGNITEIYNSLPSGALNVPKFMKWITSNPNEFIRLQNSFSYISKRIVPLISTVNKVMSENETTIESGYNELGEIICGSPENDFKLFMRNF-IKNQRRKRSLLTCQLIFQSFFQNSIVKFEMYNMLAPLIFGKVFYFPNVLIIRQIIEKANLTFKILDNLRLASVEWRLHFQTFLLDYISNNVFINDVKKFCKAYYSANPKICDAVNTLFNITNVKSYIDGVSKLFSWIERGLNCTELDRFIPLDSLKDIDKLTNQSFRNFLAVIIFNETFQYLTPKNTTFLSYQIRIPLSRIDSTYKFKVLDRFWTPYPRRNTFTDFKYVLSGFIFLQEAIDQAFIELVTNNESIEVGSSMHIMPYPCYLIDKFLQRLANLLPFLLVMAWGPSVTVLIKSIVYEKESRLKEYMKVMGLNNFVHWVSWFISTIVVLIIPVVIMSVTLRLSKITAMSSLAXXXXXXXXXXXXXXCQTFMVSVFFSKANVASVSGGILYFTFYMVFVVFIKLEGELSLTMYYSCGLLSQVAFSNAVKFMIYWEQLYEGVQFSNLFQNPGESLPFGVGHCIILMIIDSFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYW-----VYNIKSSESIPLMRNNN-QNCEINHQAFESEPENLKLGISIHNLVKLYPSNKIPVINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRTIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXI-----LKFVKIYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLIN-KEKSY-------------YSYYCNILKMKLRINATKTEIFLNQNPDQKQSKFLDQSDH-LLKGFPLLQQQIIALHIKRYHYAKRDFKGFLAEXXXXXXXXXXXXXXXXXXXXXXKQIPMQISPWLMMSKMGKENLNTFYRKENISLGLINKLESEYRSDLGESGIRCMNPSIYRLDNYQCFYRNENNMWSPASILDIPMVSPECDCSKTGNQICNDLRSGGPPNSYRIMTSSDKLNNLTGYNISDYLLKNFPKLSRKLYGGFQFVLPSTFGWSSKLIGDSPFWEELRDFVNASQANHNQSNLNSLKFIDYLQKTFKIYGIKTSFTRIWANSKGYVSMPAYANIFXXXXXXXXXXKSAVKFIDYGISVSNFPIEMEQSTKFLDLVNQMILEMSLAIFVIFGLSFIPASFVIFLVEERVSGSKRQQFVSGINPYVYWVSNFLWDIMKYXXXXXXXXXXXXAFDYQSYICSKNALAFILLLIFYGLAIIPHMYPFSFFISTPSTAFVVLNAYNLLVGTITTISTFILDILEVNYEYLKEINDILKKVFLIFPQFNLGRGIMDLFFNYFYNSNSIVKHEYNALQWDIAGEKLFSLFSLSIGWWIVLIIIESGIVNRIICGKLKNSYLKRIEIRNTEDFDVNLERERMSSDQKSDDVLRVINLTKIYNVYLKFKDNCGEKGKDNYIKNKAREVAVNNLCFGVREGECFGLLGVNGAGKTTTF 5301 + +PL ++FIL AVR + Y M C +EK+M SMGPIPFL DF+CTFNTSCY+ TQI+W ++N+F F+ NI+ +Y+SL + VP F+ W NPN + +L NS +YIS I I+++ ++ + ++T I LG+++CGS +ND +F++NF + +S+ TCQL F ++F S +Y ++ PL+FGK++Y PN ++II +AN TF+ILDNLRLASVEWRL F +L++ +N +ND + +C ++ +C +N +I ++S I +S +F IE LNCT+L++F P+ S DID L+NQS LA I+F + FQYLTP+N TFL+Y+IR+P SRIDST FKVLDR WTP PR NT T+F Y SGF+FLQE IDQAFIEL+T+N S+ +GSSM IMPYPCYL D+ + L+NL+PFLLV+AW P+VT LIKSIVYEKE+RLKE+M+VMG++NFVHWVSWF STI++LI+P+++M++ L+L KI SS ++F ++FFYV+SFICQ FM+SVFF KA+VASVSGGILYF FY+ F++F+ L+ +++ MYY+ LL+QV+ SN++ F+ YWEQ +G+QFSNLF + L FGVGHC+++M IDS IYLLI WYVE VFPGQ+G++KPWNF R+YW N+ +ES N N +N + FE EP +LK+GISI NL K++P +KIP +NNLNLNFY+SQITAFLGHNGAGKTTTISILTG+F+PSSGTA+ILN+DIRT MD IRQK+GLCPQ+N+LF+ LTVEDHIYFYGLLKRMDKN I++++P+II++V LT+KI++L+ +LSGGMKRKLS+A+AF+G+SRVVFLDEPTAGVDPFARRGIWDLL+KYR DR IILTTHHMDEADYLSDR+AIISQGKLQCCGS VFLK++FG GYYL ++K ++ +N +I LKF++ ++ DA+MMEE+R QWTI LPQ++ N KF +LF NLD+ M ++ I++YGLSDTSLEEVFLKVADDP ++ KEK + +IL ++ + K E + ++ F + + +L G L QQII L IKR+HY +R+ K F+AEL+LPVLMIL II L IS PM ISPWLMM K NLNTFYRKE+ S +I+ +E+ YRSD+GESG+RCMN ++YRL NY C+ N N WS I + SPECDCSKTG Q C+D SGGP S RIMTSSD+L N+TGYNISDYLLK F +K YGG+QF+LPS FG SS IG SP W+ + +S N + +N NSL F++Y Q+ F GIKT++TRIW NSKG+VSMPAY NIFSN+LLRS+L S YGISV+N+P++ Q+ L QM LE+SLAIFVIFGLSFIPASFVIFL+EER+SG+KRQQFVSG+NPY+YW+SNF+WD++KYIIP+ I+++IF+ F+YQSYI ++NA AFI+LL+FYGLAIIPHMYPFSF +S PSTAFV+L+AYNLLVG ITTI+TF LD+L+V+ LK ND+LKK+FLIFPQ++LGRG+MDL FNY + S K Y+ W+ G+KL SL L I WW V+ IESGI+NR ICG++KN LK E+++ ED DV LERERM+ +++ DVL+VINLTKIYN L + C ++ + + ++ R++AVNN+CFGV+EGECFGLLGVNGAGKTTTF Sbjct: 1 MLIPLFVIFILVAVRRITSSYSMGTCELREKQMGSMGPIPFLRDFICTFNTSCYNTTQIDWTKNSINDFLTFMNNISSLYSSLYTTNFTVPGFVDWSNVNPNLYTQLLNSINYISPVISSFITSIKEMQTGDQTLINKNLKILGQLLCGSDQNDIDVFLQNFNLSLINSTKSIPTCQLAFMNYFTKSNGLSVLYPIIGPLVFGKIYYTPNSAFTQEIIRRANSTFRILDNLRLASVEWRLTFSNWLINNSTNMGLLNDARNYCA---NSRTLMCQIINNSLSIETIQSTIASLSAMFVLIENSLNCTQLNKFTPMPSSIDIDNLSNQSSLGILAGIVFTDDFQYLTPQNATFLNYRIRMPASRIDSTKNFKVLDRLWTPIPRVNTLTNFNYYTSGFLFLQEIIDQAFIELITDNASVNIGSSMQIMPYPCYLNDRLISFLSNLMPFLLVIAWAPAVTNLIKSIVYEKENRLKEFMRVMGMSNFVHWVSWFTSTILILILPIILMTIILKLGKILTFSSPIIIFLILFFYVVSFICQCFMISVFFDKASVASVSGGILYFVFYLPFLIFVNLQDSMTVPMYYAAALLTQVSLSNSINFIAYWEQSTDGIQFSNLFDSAIMDLNFGVGHCMVMMWIDSVIYLLIAWYVETVFPGQFGLSKPWNFPFTRNYWNSICGKSNLDETESFSNSLNEPIPNESLNERGFEHEPAHLKMGISIQNLFKIFPKSKIPAVNNLNLNFYQSQITAFLGHNGAGKTTTISILTGLFAPSSGTAFILNDDIRTNMDRIRQKMGLCPQHNILFEDLTVEDHIYFYGLLKRMDKNMIKNIIPKIIEEVGLTKKISSLTKNLSGGMKRKLSVALAFVGDSRVVFLDEPTAGVDPFARRGIWDLLVKYRCEDRAIILTTHHMDEADYLSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNHVPDAKMMEETRSQWTIALPQSENNCSKFPDLFDNLDRAMEDLGIVTYGLSDTSLEEVFLKVADDPSGEVGGIKEKKLTPEKLDALTDGGNFPRPASILSLRDKSEFAKIE-------EIRRVSFKSEITYSMLTGISLFIQQIIGLQIKRFHYTRRNMKSFIAELVLPVLMILMIIGLLNISSPLSDAPPMVISPWLMMPKTRLVNLNTFYRKESPSNAIIDSMENVYRSDVGESGVRCMNSAVYRLGNYSCYPENNVNQWSAIPSAPISLSSPECDCSKTGFQFCSDPLSGGPTISSRIMTSSDQLGNITGYNISDYLLKKFKTFIKKQYGGYQFLLPSNFGLSSNSIGSSPIWDGI-----SSYINSSPNNSNSLGFLNYSQRFFNQSGIKTNYTRIWVNSKGFVSMPAYENIFSNILLRSKL-NSFSDISKYGISVTNYPLKFSQTDLQSQLNTQMFLEVSLAIFVIFGLSFIPASFVIFLIEERISGAKRQQFVSGVNPYLYWISNFMWDLVKYIIPVAIVLVIFVLFNYQSYIGTQNAGAFIVLLLFYGLAIIPHMYPFSFVLSNPSTAFVILDAYNLLVGAITTIATFFLDLLQVDDPSLKPANDVLKKIFLIFPQYDLGRGMMDLSFNYLQYNISGGKVTYDPFGWETTGQKLCSLIILFIAWWSVIFTIESGIINRSICGRIKNYKLKERELQHEEDTDVFLERERMTKRKENVDVLKVINLTKIYNPSLNINNKCCKRAVADSLSSEKRKLAVNNICFGVKEGECFGLLGVNGAGKTTTF 1746 HSP 2 Score: 172.17 bits (435), Expect = 1.617e-42 Identity = 125/422 (29.62%), Postives = 209/422 (49.53%), Query Frame = 1 Query: 1999 SFIYLLITWYVEAVFPGQYGVAKPWNFLCARSYWVYNIKSSESIPLMRNNNQNCEINHQAFESEPENLKLGISIHNLVKLY-PSNKIP-------------------VINNLNLNFYESQITAFLGHNGAGKTTTISILTGIFSPSSGTAYILNEDIRTEMDSIRQKIGLCPQYNVLFDSLTVEDHIYFYGLLKRMDKNEIESVLPRIIKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDRT-IILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYXXXXXXXXXXXXXXXXXXXILKFVK-IYIADARMMEESRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVADDPMNKLINKE 3198 S I L I W+ +F + G+ +C R Y +K E L + + + + EN+ + + + NL K+Y PS I +NN+ E + LG NGAGKTTT +LTG + G A+I + I EM + +G CPQ++ L LT E+ +YFY ++ + + I+ + +K++ L L+ LSGG KRKLS A+A IG ++VFLDEPT+G+D ARR +W+++ + ++T +ILT+H+M+E + L R++I+ G+++C G++ LK KFG+ Y++ + N + + +F + + + D + LQ+ S K + +F + A I Y +S TSL+EVF+ A + + N+E Sbjct: 1619 SLIILFIAWW-SVIFTIESGIIN--RSICGR-IKNYKLKERE---LQHEEDTDVFLERERMTKRKENVDV-LKVINLTKIYNPSLNINNKCCKRAVADSLSSEKRKLAVNNICFGVKEGECFGLLGVNGAGKTTTFKMLTGEEEITHGDAFINDHSIVNEMIDAHKNMGFCPQFDALHSLLTCEEQLYFYCRIRGIPLDHIKPTVELSLKNLSLIPHTKKLTQTLSGGNKRKLSTAIAIIGFPKIVFLDEPTSGMDAGARRFLWNVIQTMTTENKTAVILTSHNMEECEVLCHRLSIMVNGEMKCLGNVQHLKSKFGDDYFVKIRMNFIENESDKIKAIMKTQFPQGVSLKDENFIT---LQYRFNC------SLKLSTIFHFFENLKANGVIADYSVSQTSLDEVFINFAKNKSSNNENEE 2023 The following BLAST results are available for this feature:
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of ATP binding cassette subfamily A member 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30019868 ID=SMED30019868|Name=ATP binding cassette subfamily A member 1|organism=Schmidtea mediterranea sexual|type=transcript|length=5301bpback to top protein sequence of SMED30019868-orf-1 >SMED30019868-orf-1 ID=SMED30019868-orf-1|Name=SMED30019868-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1767bp FFMNSLISNQLRTLLWKNFRLKRRKWKILLIELTVPLIMVFILFAVRSSQback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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