Nadh dehydrogenase

Overview
NameNadh dehydrogenase
Smed IDSMED30019789
Length (bp)2308
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Nadh dehydrogenase (SMED30019789) t-SNE clustered cells

Violin plots show distribution of expression levels for Nadh dehydrogenase (SMED30019789) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Nadh dehydrogenase (SMED30019789) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Nadh dehydrogenase (SMED30019789) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30019789

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
epidermisSMED30019789h1SMcG0021157 dd_Smed_v4_3442_0_1dd_Smed_v4PMID:27063937
Scimone et al., 2016
whole organism asexual adult colorimetric in situ hybridization evidence
central nervous systemSMED30019789h1SMcG0021157 dd_Smed_v4_3442_0_1dd_Smed_v4PMID:27063937
Scimone et al., 2016
whole organism asexual adult colorimetric in situ hybridization evidence
Note: Hover over icons to view figure legend
Homology
BLAST of Nadh dehydrogenase vs. Ensembl Human
Match: NDUFS2 (NADH:ubiquinone oxidoreductase core subunit S2 [Source:HGNC Symbol;Acc:HGNC:7708])

HSP 1 Score: 227.639 bits (579), Expect = 7.779e-66
Identity = 105/129 (81.40%), Postives = 117/129 (90.70%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+RI+ QC+NKMPPGEIKVDD K+ PP R+EMK SME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L K+SKG MLAD+VAIIGT D+VFGEVDR
Sbjct:  335 EEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEVDR 463          
BLAST of Nadh dehydrogenase vs. Ensembl Human
Match: NDUFS2 (NADH:ubiquinone oxidoreductase core subunit S2 [Source:HGNC Symbol;Acc:HGNC:7708])

HSP 1 Score: 211.846 bits (538), Expect = 3.993e-60
Identity = 98/123 (79.67%), Postives = 110/123 (89.43%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVV 2287
            EEMRQS+RI+ QC+NKMPPGEIKVDD K+ PP R+EMK SME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L K+SKG MLAD+VAIIGT  +V
Sbjct:  335 EEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTRPIV 457          
BLAST of Nadh dehydrogenase vs. Ensembl Celegans
Match: gas-1 (Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93873])

HSP 1 Score: 207.608 bits (527), Expect = 8.031e-59
Identity = 90/129 (69.77%), Postives = 112/129 (86.82%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+ I+ QC+NKMP GEIKVDDHK+VPP R+EMK++ME+LIHHFK FTEG+QVPPG TY  IE+PKGE GVYLV+DG+ +PYRC I+APGF HLAA+H +    ++AD+VA+IGT+D+VFGEVDR
Sbjct:  354 EEMRQSLNIVHQCLNKMPAGEIKVDDHKVVPPKRAEMKENMESLIHHFKFFTEGFQVPPGATYVPIEAPKGEFGVYLVADGTGKPYRCFIRAPGFAHLAAIHDVCYMSLIADIVAVIGTMDIVFGEVDR 482          
BLAST of Nadh dehydrogenase vs. Ensembl Celegans
Match: nduf-2.2 (NADH Ubiquinone oxidoreductase Fe-S protein [Source:UniProtKB/TrEMBL;Acc:Q22800])

HSP 1 Score: 204.912 bits (520), Expect = 6.829e-58
Identity = 89/129 (68.99%), Postives = 111/129 (86.05%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+ I+ QC+NKMP GEIK DDHK+VPP R+EMK++ME+LIHHFK FTEG+QVPPG TY  IE+PKGE GVYLV+DG+ +PYRC I+APGF HLAA+H +    ++AD+VA+IGT+D+VFGEVDR
Sbjct:  346 EEMRQSLNIVHQCLNKMPTGEIKSDDHKVVPPKRAEMKENMESLIHHFKFFTEGFQVPPGATYVPIEAPKGEFGVYLVADGTGKPYRCFIRAPGFAHLAAIHDVCYMSLIADIVAVIGTMDIVFGEVDR 474          
BLAST of Nadh dehydrogenase vs. Ensembl Celegans
Match: nduf-2.2 (NADH Ubiquinone oxidoreductase Fe-S protein [Source:UniProtKB/TrEMBL;Acc:Q22800])

HSP 1 Score: 204.912 bits (520), Expect = 6.829e-58
Identity = 89/129 (68.99%), Postives = 111/129 (86.05%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+ I+ QC+NKMP GEIK DDHK+VPP R+EMK++ME+LIHHFK FTEG+QVPPG TY  IE+PKGE GVYLV+DG+ +PYRC I+APGF HLAA+H +    ++AD+VA+IGT+D+VFGEVDR
Sbjct:  346 EEMRQSLNIVHQCLNKMPTGEIKSDDHKVVPPKRAEMKENMESLIHHFKFFTEGFQVPPGATYVPIEAPKGEFGVYLVADGTGKPYRCFIRAPGFAHLAAIHDVCYMSLIADIVAVIGTMDIVFGEVDR 474          
BLAST of Nadh dehydrogenase vs. Ensembl Fly
Match: ND-49 (gene:FBgn0039909 transcript:FBtr0333676)

HSP 1 Score: 226.098 bits (575), Expect = 1.530e-65
Identity = 104/129 (80.62%), Postives = 116/129 (89.92%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+RI+ QC+N+MP GEIK DD K+ PPSRSEMK SMEALIHHFKLFT+GYQVPPG TYTAIE+PKGE GVYL+SDGS+RPYRCKIKAPGF HLAAL K+ K  MLAD+VAIIGTLDVVFGE+DR
Sbjct:  340 EEMRQSLRIIDQCLNQMPAGEIKTDDAKVAPPSRSEMKTSMEALIHHFKLFTQGYQVPPGATYTAIEAPKGEFGVYLISDGSSRPYRCKIKAPGFAHLAALEKIGKQHMLADVVAIIGTLDVVFGEIDR 468          
BLAST of Nadh dehydrogenase vs. Ensembl Fly
Match: ND-49 (gene:FBgn0039909 transcript:FBtr0089105)

HSP 1 Score: 226.098 bits (575), Expect = 1.530e-65
Identity = 104/129 (80.62%), Postives = 116/129 (89.92%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+RI+ QC+N+MP GEIK DD K+ PPSRSEMK SMEALIHHFKLFT+GYQVPPG TYTAIE+PKGE GVYL+SDGS+RPYRCKIKAPGF HLAAL K+ K  MLAD+VAIIGTLDVVFGE+DR
Sbjct:  340 EEMRQSLRIIDQCLNQMPAGEIKTDDAKVAPPSRSEMKTSMEALIHHFKLFTQGYQVPPGATYTAIEAPKGEFGVYLISDGSSRPYRCKIKAPGFAHLAALEKIGKQHMLADVVAIIGTLDVVFGEIDR 468          
BLAST of Nadh dehydrogenase vs. Ensembl Fly
Match: ND-49L (gene:FBgn0039331 transcript:FBtr0273265)

HSP 1 Score: 185.652 bits (470), Expect = 2.277e-50
Identity = 81/128 (63.28%), Postives = 106/128 (82.81%), Query Frame = 2
Query: 1922 EMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EMR+S+ I+ QC++ MPPGEIKVDD KI PP RS+MK+ ME LIHHFK F++G++VPPG TY A+ESPKGE G +L+SDGS+RPYRCKI+   + HLA + K++   +LAD+VAIIG+LD+VFGE+DR
Sbjct:  396 EMRESVNIIKQCIDAMPPGEIKVDDLKICPPQRSKMKEGMEDLIHHFKHFSQGFRVPPGQTYCAVESPKGEFGAFLISDGSSRPYRCKIRPASYAHLALMAKMAPAHLLADVVAIIGSLDIVFGEIDR 523          
BLAST of Nadh dehydrogenase vs. Ensembl Zebrafish
Match: ndufs2 (NADH:ubiquinone oxidoreductase core subunit S2 [Source:ZFIN;Acc:ZDB-GENE-050522-273])

HSP 1 Score: 229.565 bits (584), Expect = 1.061e-66
Identity = 106/129 (82.17%), Postives = 117/129 (90.70%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+RIM QC+NKMPPGEIKVDD KI PP RSEMK SME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L ++S+G MLAD+VAIIGT D+VFGEVDR
Sbjct:  336 EEMRQSLRIMHQCLNKMPPGEIKVDDAKIAPPKRSEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDRMSQGHMLADVVAIIGTQDIVFGEVDR 464          
BLAST of Nadh dehydrogenase vs. Ensembl Xenopus
Match: b3gat3 (beta-1,3-glucuronyltransferase 3 [Source:Xenbase;Acc:XB-GENE-1010243])

HSP 1 Score: 226.098 bits (575), Expect = 2.265e-65
Identity = 105/129 (81.40%), Postives = 117/129 (90.70%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+RI+LQC+NKMP GEIKVDD K+ PP RSEMK SME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L K+S+G MLAD+VAIIGT D+VFGEVDR
Sbjct:  331 EEMRQSMRIILQCLNKMPEGEIKVDDAKVSPPKRSEMKRSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSQGHMLADVVAIIGTQDIVFGEVDR 459          
BLAST of Nadh dehydrogenase vs. Ensembl Xenopus
Match: b3gat3 (beta-1,3-glucuronyltransferase 3 [Source:Xenbase;Acc:XB-GENE-1010243])

HSP 1 Score: 206.453 bits (524), Expect = 1.846e-58
Identity = 96/118 (81.36%), Postives = 107/118 (90.68%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIG 2272
            EEMRQS+RI+LQC+NKMP GEIKVDD K+ PP RSEMK SME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L K+S+G MLAD+VAIIG
Sbjct:  305 EEMRQSMRIILQCLNKMPEGEIKVDDAKVSPPKRSEMKRSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSQGHMLADVVAIIG 422          
BLAST of Nadh dehydrogenase vs. Ensembl Xenopus
Match: b3gat3 (beta-1,3-glucuronyltransferase 3 [Source:Xenbase;Acc:XB-GENE-1010243])

HSP 1 Score: 204.527 bits (519), Expect = 1.055e-57
Identity = 98/127 (77.17%), Postives = 110/127 (86.61%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAII---GTLDVVF 2290
            EEMRQS+RI+LQC+NKMP GEIKVDD K+ PP RSEMK SME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L K+S+G MLAD+VAII   G   +VF
Sbjct:  311 EEMRQSMRIILQCLNKMPEGEIKVDDAKVSPPKRSEMKRSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSQGHMLADVVAIIVYPGKQYIVF 437          
BLAST of Nadh dehydrogenase vs. Ensembl Xenopus
Match: b3gat3 (beta-1,3-glucuronyltransferase 3 [Source:Xenbase;Acc:XB-GENE-1010243])

HSP 1 Score: 204.912 bits (520), Expect = 1.144e-57
Identity = 98/127 (77.17%), Postives = 110/127 (86.61%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAII---GTLDVVF 2290
            EEMRQS+RI+LQC+NKMP GEIKVDD K+ PP RSEMK SME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L K+S+G MLAD+VAII   G   +VF
Sbjct:  322 EEMRQSMRIILQCLNKMPEGEIKVDDAKVSPPKRSEMKRSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSQGHMLADVVAIIVYPGKQYIVF 448          
BLAST of Nadh dehydrogenase vs. Ensembl Xenopus
Match: b3gat3 (beta-1,3-glucuronyltransferase 3 [Source:Xenbase;Acc:XB-GENE-1010243])

HSP 1 Score: 204.527 bits (519), Expect = 1.208e-57
Identity = 95/117 (81.20%), Postives = 106/117 (90.60%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAII 2269
            EEMRQS+RI+LQC+NKMP GEIKVDD K+ PP RSEMK SME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L K+S+G MLAD+VAII
Sbjct:  312 EEMRQSMRIILQCLNKMPEGEIKVDDAKVSPPKRSEMKRSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSQGHMLADVVAII 428          
BLAST of Nadh dehydrogenase vs. Ensembl Mouse
Match: Ndufs2 (NADH:ubiquinone oxidoreductase core subunit S2 [Source:MGI Symbol;Acc:MGI:2385112])

HSP 1 Score: 226.483 bits (576), Expect = 5.924e-66
Identity = 104/129 (80.62%), Postives = 117/129 (90.70%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+RI+ QC+NKMPPGEIKVDD K+ PP R+EMK SME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L K+SKG MLAD+VAIIGT D+VFGE+DR
Sbjct:  309 EEMRQSLRIIEQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEIDR 437          
BLAST of Nadh dehydrogenase vs. Ensembl Mouse
Match: Ndufs2 (NADH:ubiquinone oxidoreductase core subunit S2 [Source:MGI Symbol;Acc:MGI:2385112])

HSP 1 Score: 226.483 bits (576), Expect = 1.340e-65
Identity = 104/129 (80.62%), Postives = 117/129 (90.70%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+RI+ QC+NKMPPGEIKVDD K+ PP R+EMK SME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L K+SKG MLAD+VAIIGT D+VFGE+DR
Sbjct:  335 EEMRQSLRIIEQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEIDR 463          
BLAST of Nadh dehydrogenase vs. UniProt/SwissProt
Match: sp|P17694|NDUS2_BOVIN (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Bos taurus OX=9913 GN=NDUFS2 PE=1 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 2.064e-65
Identity = 106/129 (82.17%), Postives = 117/129 (90.70%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQSIRI+ QC+NKMPPGEIKVDD K+ PP R+EMK SME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L K+SKG MLAD+VAIIGT D+VFGEVDR
Sbjct:  335 EEMRQSIRIISQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEVDR 463          
BLAST of Nadh dehydrogenase vs. UniProt/SwissProt
Match: sp|Q0MQG3|NDUS2_PONPY (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Pongo pygmaeus OX=9600 GN=NDUFS2 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.263e-65
Identity = 105/129 (81.40%), Postives = 118/129 (91.47%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+RI+ QC+NKMPPGEIKVDD K+ PP R+EMK SME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA+L K+SKG MLAD+VAIIGT D+VFGEVDR
Sbjct:  335 EEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLASLDKMSKGHMLADVVAIIGTQDIVFGEVDR 463          
BLAST of Nadh dehydrogenase vs. UniProt/SwissProt
Match: sp|Q0MQG5|NDUS2_PANTR (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Pan troglodytes OX=9598 GN=NDUFS2 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 3.698e-65
Identity = 105/129 (81.40%), Postives = 117/129 (90.70%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+RI+ QC+NKMPPGEIKVDD K+ PP R+EMK SME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L K+SKG MLAD+VAIIGT D+VFGEVDR
Sbjct:  335 EEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEVDR 463          
BLAST of Nadh dehydrogenase vs. UniProt/SwissProt
Match: sp|Q0MQG4|NDUS2_GORGO (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Gorilla gorilla gorilla OX=9595 GN=NDUFS2 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 3.698e-65
Identity = 105/129 (81.40%), Postives = 117/129 (90.70%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+RI+ QC+NKMPPGEIKVDD K+ PP R+EMK SME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L K+SKG MLAD+VAIIGT D+VFGEVDR
Sbjct:  335 EEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEVDR 463          
BLAST of Nadh dehydrogenase vs. UniProt/SwissProt
Match: sp|O75306|NDUS2_HUMAN (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Homo sapiens OX=9606 GN=NDUFS2 PE=1 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 3.736e-65
Identity = 105/129 (81.40%), Postives = 117/129 (90.70%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+RI+ QC+NKMPPGEIKVDD K+ PP R+EMK SME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L K+SKG MLAD+VAIIGT D+VFGEVDR
Sbjct:  335 EEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEVDR 463          
BLAST of Nadh dehydrogenase vs. TrEMBL
Match: A0A504YWA4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 mitochondrial OS=Fasciola gigantica OX=46835 GN=FGIG_11353 PE=4 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.017e-68
Identity = 107/130 (82.31%), Postives = 117/130 (90.00%), Query Frame = 2
Query: 1916 FEEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
             EEMRQSIRIM QC+NKMP GE+KVDD KI PP RSEMKDSMEALIHHFKLFTEGYQVPPG TYTAIE+PKGE GVYLVSDG+NRPYRCKIKAPGF HLA + KL +G +LAD+VA+IGTLD+VFGEVDR
Sbjct:   74 LEEMRQSIRIMQQCLNKMPAGEVKVDDAKITPPKRSEMKDSMEALIHHFKLFTEGYQVPPGATYTAIEAPKGEFGVYLVSDGTNRPYRCKIKAPGFAHLAGIDKLCRGYLLADVVAVIGTLDIVFGEVDR 203          
BLAST of Nadh dehydrogenase vs. TrEMBL
Match: A0A2H1C1P8 (Respiratory-chain NADH dehydrogenase, subunit OS=Fasciola hepatica OX=6192 GN=D915_11715 PE=4 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.038e-68
Identity = 107/130 (82.31%), Postives = 117/130 (90.00%), Query Frame = 2
Query: 1916 FEEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
             EEMRQSIRIM QC+NKMP GE+KVDD KI PP RSEMKDSMEALIHHFKLFTEGYQVPPG TYTAIE+PKGE GVYLVSDG+NRPYRCKIKAPGF HLA + KL +G +LAD+VA+IGTLD+VFGEVDR
Sbjct:   74 LEEMRQSIRIMQQCLNKMPAGEVKVDDAKITPPKRSEMKDSMEALIHHFKLFTEGYQVPPGATYTAIEAPKGEFGVYLVSDGTNRPYRCKIKAPGFAHLAGIDKLCRGYLLADVVAVIGTLDIVFGEVDR 203          
BLAST of Nadh dehydrogenase vs. TrEMBL
Match: A0A2U3YL66 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Leptonychotes weddellii OX=9713 GN=NDUFS2 PE=4 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 2.020e-65
Identity = 105/129 (81.40%), Postives = 117/129 (90.70%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+RI+ QC+NKMPPGEIKVDD K+ PP R+EMK SME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L K+SKG MLAD+VAIIGT D+VFGEVDR
Sbjct:  114 EEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEVDR 242          
BLAST of Nadh dehydrogenase vs. TrEMBL
Match: A0A0S7M3Q2 (NDUS2 (Fragment) OS=Poeciliopsis prolifica OX=188132 GN=NDUS2 PE=4 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.356e-65
Identity = 104/129 (80.62%), Postives = 116/129 (89.92%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+RIMLQ +NKMP GEIKVDD K+ PP RSEMK SME+LIHHFKL+TEGYQVPPG TYTA+E+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L K+S+G MLAD+VAIIGT D+VFGEVDR
Sbjct:   40 EEMRQSLRIMLQALNKMPEGEIKVDDAKVAPPKRSEMKTSMESLIHHFKLYTEGYQVPPGATYTAVEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSQGHMLADVVAIIGTQDIVFGEVDR 168          
BLAST of Nadh dehydrogenase vs. TrEMBL
Match: A0A226ML00 (Complex1_49kDa domain-containing protein OS=Callipepla squamata OX=9009 GN=ASZ78_007138 PE=4 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 3.111e-65
Identity = 104/129 (80.62%), Postives = 117/129 (90.70%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+RI+LQC+NKMP GEIKVDD KI PP R+EMK SME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L ++S+G MLAD+VAIIGT D+VFGEVDR
Sbjct:   44 EEMRQSLRIILQCLNKMPEGEIKVDDAKISPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDRMSQGHMLADVVAIIGTQDIVFGEVDR 172          
BLAST of Nadh dehydrogenase vs. Ensembl Cavefish
Match: ndufs2 (NADH:ubiquinone oxidoreductase core subunit S2 [Source:NCBI gene;Acc:103041339])

HSP 1 Score: 224.942 bits (572), Expect = 3.766e-65
Identity = 104/129 (80.62%), Postives = 116/129 (89.92%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+RIM QC+NKMP GEIKVDD K+ PP RSEMK SME+LIHHFKL+TEGYQVPPG TYTA+E+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L K+S+G MLAD+VAIIGT D+VFGEVDR
Sbjct:  337 EEMRQSLRIMHQCLNKMPEGEIKVDDAKVAPPKRSEMKMSMESLIHHFKLYTEGYQVPPGATYTAVEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSQGHMLADVVAIIGTQDIVFGEVDR 465          
BLAST of Nadh dehydrogenase vs. Ensembl Nematostella
Match: EDO39377 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAD2])

HSP 1 Score: 223.402 bits (568), Expect = 1.212e-65
Identity = 102/129 (79.07%), Postives = 118/129 (91.47%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMR+S++I+LQC+NKMPPGEIKVDD KI PP RSEMKDSME+LIHHFKL+TEGYQVPPG TYTAIE+PKGE GVYLV+DG+++PYRCKIKAPGF HLA    ++KG MLAD+VA+IGTLDVVFGEVDR
Sbjct:  284 EEMRESLKIILQCLNKMPPGEIKVDDAKISPPKRSEMKDSMESLIHHFKLYTEGYQVPPGGTYTAIEAPKGEFGVYLVADGTSKPYRCKIKAPGFAHLAGTDFITKGHMLADVVAVIGTLDVVFGEVDR 412          
BLAST of Nadh dehydrogenase vs. Ensembl Nematostella
Match: EDO25426 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A8DWI3])

HSP 1 Score: 186.808 bits (473), Expect = 1.990e-55
Identity = 81/129 (62.79%), Postives = 108/129 (83.72%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+ I+ QC+  + PG +KVDD KI PPSR+ MK SME+LIHHFKL+TEGY +P  ++Y+ +E+PKGE G+Y+VSDG+N+PYRC+IKAPGF+HL +L  +SKG M+AD+V I+GT D+VFGE+DR
Sbjct:   22 EEMRQSLIIVQQCLVNIKPGLVKVDDKKITPPSRANMKFSMESLIHHFKLYTEGYSLPVASSYSVVEAPKGEFGLYIVSDGTNKPYRCRIKAPGFLHLQSLDYMSKGHMIADVVTIVGTQDIVFGEIDR 150          
BLAST of Nadh dehydrogenase vs. Ensembl Medaka
Match: ndufs2 (NADH:ubiquinone oxidoreductase core subunit S2 [Source:NCBI gene;Acc:101168577])

HSP 1 Score: 221.476 bits (563), Expect = 8.246e-64
Identity = 102/129 (79.07%), Postives = 115/129 (89.15%), Query Frame = 2
Query: 1919 EEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            EEMRQS+RIM + +NKMP GEIKVDD K+ PP RSEMK SME+LIHHFKL+TEGYQVPPG TYTA+E+PKGE GVYLVSDGS+RPYRCKIKAPGF HLA L K++KG MLAD+VAIIGT D+VFGEVDR
Sbjct:  338 EEMRQSLRIMHEALNKMPEGEIKVDDAKVAPPKRSEMKTSMESLIHHFKLYTEGYQVPPGATYTAVEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMAKGHMLADVVAIIGTQDIVFGEVDR 466          
BLAST of Nadh dehydrogenase vs. Planmine SMEST
Match: SMESG000024322.1 (SMESG000024322.1)

HSP 1 Score: 271.552 bits (693), Expect = 9.262e-83
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 2
Query: 1916 FEEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 2305
            FEEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR
Sbjct:  327 FEEMRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFTEGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALHKLSKGLMLADLVAIIGTLDVVFGEVDR 456          
BLAST of Nadh dehydrogenase vs. Planmine SMEST
Match: SMESG000047667.1 (SMESG000047667.1)

HSP 1 Score: 121.709 bits (304), Expect = 6.421e-28
Identity = 71/169 (42.01%), Postives = 94/169 (55.62%), Query Frame = -3
Query:  126 MEWEMPDNHNDLEWRSIIKARCNNLDPNMKQANHKGRIGSRKCRKCGLPIESSAHLIN*CDNGNRLRTVKHSDVQKILVELL------------------------------KTIIVNIKCPFDDKQAIAATRNKDCDKYRELANQI*KR----DTVETYVVCSTGQYE 530
            MEW+MP    D +WR + K R N LD NMKQAN  GR+G+ KCRKC    ES++H+IN C +GN  R  KH+ VQ  L + L                              K +IV+IKCPFD++ AI + RNK+ DKYRELA +I  +     T+ T+VVCS G ++
Sbjct: 1348 MEWKMPRGLPDPDWRFLTKVRANMLDINMKQANQGGRLGNTKCRKCE-DKESASHVINHCASGNWSRVEKHNQVQNELAKELTKRNISFEKDCIPKETKGTLRPDLVIRLKDKIMIVDIKCPFDEESAIESARNKNIDKYRELAKEIQAKTVLPTTISTFVVCSLGTWD 1515          
BLAST of Nadh dehydrogenase vs. Planmine SMEST
Match: SMESG000069571.1 (SMESG000069571.1)

HSP 1 Score: 119.398 bits (298), Expect = 2.683e-27
Identity = 72/169 (42.60%), Postives = 93/169 (55.03%), Query Frame = -3
Query:  126 MEWEMPDNHNDLEWRSIIKARCNNLDPNMKQANHKGRIGSRKCRKCGLPIESSAHLIN*CDNGNRLRTVKHSDVQKILVELL------------------------------KTIIVNIKCPFDDKQAIAATRNKDCDKYRELANQI*KR----DTVETYVVCSTGQYE 530
            MEW+MP    D +WR + KA+ N LD NMKQAN  GR+GS KCRKC    ES++H+I  C +GN  R  KH+ VQ  L + L                              K +IV+IKCPFD++ AI   RNK+ DKYRELA +I  +     TV T+VVCS G ++
Sbjct:  880 MEWKMPRGLPDPDWRFLTKAKANMLDVNMKQANQGGRLGSTKCRKCE-DKESASHVIYHCPSGNWSRVEKHNQVQNELTKELAKRNISFEKDSIPKEFKDSLRPDLVIRFKDKIMIVDIKCPFDEESAIEIARNKNMDKYRELAKEIHSKTGLQTTVSTFVVCSLGTWD 1047          
BLAST of Nadh dehydrogenase vs. Planmine SMEST
Match: SMESG000013875.1 (SMESG000013875.1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.362e-15
Identity = 42/82 (51.22%), Postives = 53/82 (64.63%), Query Frame = -3
Query:  285 MEWEMPDNHNDLEWRSIIKARCNNLDPNMKQANHKGRIGSRKCRKCGLPIESSAHLIN*CDNGNRLRTVKHSDVQKILVELL 530
            MEW+MP    D +WR + K R N LD NMKQAN  GR+G+ KCRKC    ES++H+IN C +GN  R  KH+ VQ  L + L
Sbjct:  745 MEWKMPRGLPDPDWRFLTKVRANMLDINMKQANQGGRLGNTKCRKCE-DKESASHVINHCASGNWSRVEKHNQVQNELAKEL 825          

HSP 2 Score: 22.3274 bits (46), Expect = 2.362e-15
Identity = 9/18 (50.00%), Postives = 11/18 (61.11%), Query Frame = -1
Query:  530 WKKETCQGQVLNLPNSEI 583
            WK   CQG +L+L  SE 
Sbjct:  727 WKALKCQGYILSLKTSEF 744          
BLAST of Nadh dehydrogenase vs. Planmine SMEST
Match: SMESG000054191.1 (SMESG000054191.1)

HSP 1 Score: 62.7734 bits (151), Expect = 4.516e-11
Identity = 39/110 (35.45%), Postives = 54/110 (49.09%), Query Frame = -3
Query:  126 CDNGNRLRTVKHSDVQKILVELLKT------------------------------IIVNIKCPFDDKQAIAATRNKDCDKYRELANQI*KR----DTVETYVVCSTGQYE 353
            C  GNRLRT KH++VQK L +LL+                                ++++KC FDD  +I   R+K+ DKYR LA QI  +     T ET+VVCS G ++
Sbjct:   43 CGFGNRLRTNKHNEVQKALEQLLRRKNMNFETESKPAEINEMLKPDIVARTREHIFVIDVKCRFDDSTSIKQARSKNHDKYRYLAKQIQDKTGIHTTAETFVVCSFGTWD 152          
The following BLAST results are available for this feature:
BLAST of Nadh dehydrogenase vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 2
Match NameE-valueIdentityDescription
NDUFS27.779e-6681.40NADH:ubiquinone oxidoreductase core subunit S2 [So... [more]
NDUFS23.993e-6079.67NADH:ubiquinone oxidoreductase core subunit S2 [So... [more]
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BLAST of Nadh dehydrogenase vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 3
Match NameE-valueIdentityDescription
gas-18.031e-5969.77Probable NADH dehydrogenase [ubiquinone] iron-sulf... [more]
nduf-2.26.829e-5868.99NADH Ubiquinone oxidoreductase Fe-S protein [Sour... [more]
nduf-2.26.829e-5868.99NADH Ubiquinone oxidoreductase Fe-S protein [Sour... [more]
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BLAST of Nadh dehydrogenase vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ND-491.530e-6580.62gene:FBgn0039909 transcript:FBtr0333676[more]
ND-491.530e-6580.62gene:FBgn0039909 transcript:FBtr0089105[more]
ND-49L2.277e-5063.28gene:FBgn0039331 transcript:FBtr0273265[more]
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BLAST of Nadh dehydrogenase vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ndufs21.061e-6682.17NADH:ubiquinone oxidoreductase core subunit S2 [So... [more]
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BLAST of Nadh dehydrogenase vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
b3gat32.265e-6581.40beta-1,3-glucuronyltransferase 3 [Source:Xenbase;A... [more]
b3gat31.846e-5881.36beta-1,3-glucuronyltransferase 3 [Source:Xenbase;A... [more]
b3gat31.055e-5777.17beta-1,3-glucuronyltransferase 3 [Source:Xenbase;A... [more]
b3gat31.144e-5777.17beta-1,3-glucuronyltransferase 3 [Source:Xenbase;A... [more]
b3gat31.208e-5781.20beta-1,3-glucuronyltransferase 3 [Source:Xenbase;A... [more]
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BLAST of Nadh dehydrogenase vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Ndufs25.924e-6680.62NADH:ubiquinone oxidoreductase core subunit S2 [So... [more]
Ndufs21.340e-6580.62NADH:ubiquinone oxidoreductase core subunit S2 [So... [more]
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BLAST of Nadh dehydrogenase vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P17694|NDUS2_BOVIN2.064e-6582.17NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
sp|Q0MQG3|NDUS2_PONPY2.263e-6581.40NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
sp|Q0MQG5|NDUS2_PANTR3.698e-6581.40NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
sp|Q0MQG4|NDUS2_GORGO3.698e-6581.40NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
sp|O75306|NDUS2_HUMAN3.736e-6581.40NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
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BLAST of Nadh dehydrogenase vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A504YWA41.017e-6882.31NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A2H1C1P81.038e-6882.31Respiratory-chain NADH dehydrogenase, subunit OS=F... [more]
A0A2U3YL662.020e-6581.40NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A0S7M3Q22.356e-6580.62NDUS2 (Fragment) OS=Poeciliopsis prolifica OX=1881... [more]
A0A226ML003.111e-6580.62Complex1_49kDa domain-containing protein OS=Callip... [more]
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BLAST of Nadh dehydrogenase vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ndufs23.766e-6580.62NADH:ubiquinone oxidoreductase core subunit S2 [So... [more]
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BLAST of Nadh dehydrogenase vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Nadh dehydrogenase vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Nadh dehydrogenase vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO393771.212e-6579.07Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO254261.990e-5562.79Predicted protein [Source:UniProtKB/TrEMBL;Acc:A8... [more]
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BLAST of Nadh dehydrogenase vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ndufs28.246e-6479.07NADH:ubiquinone oxidoreductase core subunit S2 [So... [more]
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BLAST of Nadh dehydrogenase vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000024322.19.262e-83100.00SMESG000024322.1[more]
SMESG000047667.16.421e-2842.01SMESG000047667.1[more]
SMESG000069571.12.683e-2742.60SMESG000069571.1[more]
SMESG000013875.12.362e-1551.22SMESG000013875.1[more]
SMESG000054191.14.516e-1135.45SMESG000054191.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30019789 ID=SMED30019789|Name=Nadh dehydrogenase|organism=Schmidtea mediterranea sexual|type=transcript|length=2308bp
ATTTCGCAAATATCATTATTTTCAGTTGTCATGTAATTATCTTAAAAAAA
ACAGCAAAGGAAAGGCAATAATTGAAATCTTTTCAATAATTTTTGCCTTT
TGCCCTCATTAAAATCTTCATATGGTTCATATTGGCCAGTAGAGCACACC
ACATAGGTTTCTACAGTGTCTCTTTTCTAGATCTGATTGGCTAGCTCTCG
GTATTTATCACAATCCTTGTTCCTTGTGGCTGCTATTGCCTGTTTGTCAT
CGAATGGACATTTGATATTTACGATGATAGTTTTTAATAGTTCCACCAAT
ATTTTCTGAACGTCGCTGTGCTTGACAGTTCTTAATCTGTTTCCGTTGTC
GCATTAATTGATCAAATGTGCCGATGATTCTATTGGTAAGCCGCATTTTC
TGCATTTTCTGGATCCTATTCTACCTTTATGGTTTGCTTGTTTCATATTC
GGGTCAAGGTTATTGCATCTTGCCTTTATTATGGAACGCCATTCTAGATC
GTTGTGATTATCAGGCATTTCCCACTCCATATTTCTGAGTTTGGTAGGTT
GAGAACTTGACCTTGGCAAGTTTCTTTCTTCCATATTTCTCTGTTGGTTT
ATTTTCACGAGTTTCGTCTAACCTTTTTAGTGCTTCTTTTAGGTTAGTTA
TTGGCTGTTCTTATCTTATATTAGTTAGGCTAATTAACTCTTCGGCTATA
ATCTTTACTATTGACCCGTGGCTGATGTTGATAAGGTTCGTCATATTGTG
TATTAATTGGATTGCTTGTCACCTATGGTTTTAGTTATATCCAAACCTCC
ATCTTCATTAGGTTAGTAATGTGTTGCATCCATGAAAGGTTGTTTGTCAG
GAAGGTTTATGACATTTTTTGATTTAATAATCTTTTTTATGTCTTTGTCG
AATTGGTTGATATCGGTTTCTGAATTGTGAATGTCCAAATAAGATGAATT
CCAATTCACCTTTTGTTAGCATCGGAATTTGGATTCGAATGCGTTTTTCA
GTTTTCTTTAAATCTCATTAAACTTTTCTTTTGGGTTTTGGTTTTTCTTG
TTGTTATCTTGTTTAACCACTAACAAAAATTAAATTGCGATCGTTCTCCC
AAATCAAAACTTTGGTATTCAGAATTTTAAATACAAGCATAAGTTCAGCA
AAATTTTATATGGAAATTGTGGTTGATTTCTCTTTTGACACCCGTTTGCC
AATAATTATGCGTGTTATTAGACCATGTGCCATTATTTATGGCGATAAAC
TCGCTGCATATGTAGCAATGTATCTGAAGTGTTAACTGAACCTTTCGTTT
CGTGGACCAATTTACTAGAGTTCAAGTACAGCATATTGAATTAAGATAGG
TACAAGAAAACTCCGTCATATGCAATATTTCCAACTTCATTAAAGAAATT
GGATTGGAAAGATAACGCATGTGAAAACGTATTGAAATATATAATTGGCT
TATTAAGAGTGGAATAAAAAATATTATTATATGGTTTTGCTTTTTTATTT
TGATAATCCTGATCTCAATTGTGCTTCTTGACAATTAAAAATATCGAGCT
GATATTTTACATATTTAATCCGTTTTCTTGTAGTAGATTTGATTAATTTT
TTAATTGAATTTTCTTTATTTCTTTATTTTCATTATTTCAAGATTTAATG
TTTTGTGACCTCCCAGTCTTTGTCCGGATTCTAGACCTATTGTATCTCAA
TTAGGATCGGGTTTTAATTTGGGATTGAATGTTTTCATAATCTCTAAAGA
AAATTTAAACTAAATGGTGAAAGTTTTTCCGAAATCAATAAAATTTTTAA
AATCTGTTTTTGATTCACTCTTTGAATTGATTTATCATTCGGAAAGTCAA
AGATTTACTGCAATTATTAAGTGCCTATCTTAATTAGAATTCTGATAATT
AGATATTTAATCCGATTCGAGGAAATGCGACAATCAATTAGGATAATGTT
ACAGTGCATGAATAAAATGCCACCCGGTGAAATTAAAGTTGATGATCACA
AAATTGTGCCACCATCGCGATCTGAAATGAAAGATTCAATGGAGGCTTTG
ATTCATCATTTTAAACTTTTCACTGAAGGGTACCAAGTTCCTCCTGGCAC
CACTTATACAGCTATTGAGTCACCCAAAGGTGAACTTGGAGTTTATTTAG
TGTCTGATGGTTCTAATCGTCCATATCGTTGCAAAATCAAAGCTCCGGGA
TTCGTTCATTTGGCAGCTCTTCATAAACTTAGCAAGGGCTTAATGTTAGC
AGATCTTGTAGCCATAATAGGAACATTAGACGTTGTTTTCGGGGAAGTGG
ATAGATAA
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protein sequence of SMED30019789-orf-1

>SMED30019789-orf-1 ID=SMED30019789-orf-1|Name=SMED30019789-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=128bp
MRQSIRIMLQCMNKMPPGEIKVDDHKIVPPSRSEMKDSMEALIHHFKLFT
EGYQVPPGTTYTAIESPKGELGVYLVSDGSNRPYRCKIKAPGFVHLAALH
KLSKGLMLADLVAIIGTLDVVFGEVDR*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000034epidermis
PLANA:0000103central nervous system
Vocabulary: INTERPRO
TermDefinition
IPR038290NADH_Q_OxRdtase_suD_sf
IPR029014NiFe-Hase_large
IPR001135NADH_Q_OxRdtase_suD
Vocabulary: molecular function
TermDefinition
GO:0016651oxidoreductase activity, acting on NAD(P)H
GO:0051287NAD binding
GO:0048038quinone binding
GO:0008137NADH dehydrogenase (ubiquinone) activity
GO:0016491oxidoreductase activity
Vocabulary: biological process
TermDefinition
GO:0055114oxidation-reduction process
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001135NADH-quinone oxidoreductase, subunit DPFAMPF00346Complex1_49kDacoord: 1..127
e-value: 6.7E-53
score: 179.5
IPR038290NADH-quinone oxidoreductase, subunit D superfamilyGENE3DG3DSA:1.10.645.20coord: 1..127
e-value: 7.0E-53
score: 181.6
NoneNo IPR availablePANTHERPTHR11993NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNITcoord: 1..127
NoneNo IPR availablePANTHERPTHR11993:SF24NADH UBIQUINONE OXIDOREDUCTASE FE-S PROTEINcoord: 1..127
IPR029014[NiFe]-hydrogenase, large subunitSUPERFAMILYSSF56762HydB/Nqo4-likecoord: 1..127