SMED30019769

Overview


Name	SMED30019769
Smed ID	SMED30019769
Length (bp)	321

Neoblast Clusters

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30019769

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 2

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication	Specimen	Lifecycle	Evidence
whole organism	SMED30019769		Contig29650	newmark_ests	PMID:27612384 Roberts-Galbraith et al., 2016
whole organism	SMED30019769		Contig29650	uc_Smed_v2	PMID:27612384 Roberts-Galbraith et al., 2016

Note: Hover over icons to view figure legend

Alignments

SMED30019769 aligns in the following genomic locations:


Alignment Location	Alignment Score
v31.053376:1112..1432 +	1605
v31.002331:86365..86686 +	1557

Homology

[Close]

BLAST of SMED30019769 vs. Ensembl Human
Match: PRMT1 (protein arginine methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:5187])

HSP 1 Score: 79.337 bits (194), Expect = 4.186e-20
Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = -2

Query:   72 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  A+KV G +CS    Y  +I+KAN+
Sbjct:   39 HEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANK 110

[Close]

BLAST of SMED30019769 vs. Ensembl Human
Match: PRMT1 (protein arginine methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:5187])

HSP 1 Score: 78.9518 bits (193), Expect = 2.087e-19
Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = -2

Query:   72 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  A+KV G +CS    Y  +I+KAN+
Sbjct:   17 HEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANK 88

[Close]

Query:   72 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  A+KV G +CS    Y  +I+KAN+
Sbjct:   17 HEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANK 88

[Close]

BLAST of SMED30019769 vs. Ensembl Human
Match: PRMT1 (protein arginine methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:5187])

HSP 1 Score: 79.7221 bits (195), Expect = 5.201e-19
Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = -2

Query:   72 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  A+KV G +CS    Y  +I+KAN+
Sbjct:   73 HEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANK 144

[Close]

BLAST of SMED30019769 vs. Ensembl Human
Match: PRMT8 (protein arginine methyltransferase 8 [Source:HGNC Symbol;Acc:HGNC:5188])

HSP 1 Score: 81.2629 bits (199), Expect = 5.809e-19
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = -2

Query:   75 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKAN 281
            H+EMLK  V+TLTY++S+YH+ H+ KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y ++IIKAN
Sbjct:   86 HEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGILSMFAAKAGAKKVFGIECSSISDYSEKIIKAN 156

[Close]

BLAST of SMED30019769 vs. Ensembl Celegans
Match: prmt-1 (Protein arginine N-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9U2X0])

HSP 1 Score: 66.6254 bits (161), Expect = 3.537e-14
Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = -2

Query:   75 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKAN 281
            H+EMLK  V+T TY++S+YH++HL KDKVV+DV  GTGIL MF  K  AKKV   + S      ++II  N
Sbjct:   37 HEEMLKDEVRTTTYRNSIYHNSHLFKDKVVMDVGSGTGILSMFAAKAGAKKVFAMEFSNMALTSRKIIADN 107

[Close]

Query:   75 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKAN 281
            H+EMLK  V+T TY++S+YH++HL KDKVV+DV  GTGIL MF  K  AKKV   + S      ++II  N
Sbjct:   37 HEEMLKDEVRTTTYRNSIYHNSHLFKDKVVMDVGSGTGILSMFAAKAGAKKVFAMEFSNMALTSRKIIADN 107

[Close]

BLAST of SMED30019769 vs. Ensembl Fly
Match: Art1 (gene:FBgn0037834 transcript:FBtr0082304)

HSP 1 Score: 67.0106 bits (162), Expect = 3.390e-14
Identity = 33/75 (44.00%), Postives = 50/75 (66.67%), Query Frame = -2

Query:   63 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEE 281
            H+EMLK  V+T+TY++++YH+ HL + K VLDV  GTGIL MF  K  A +V   DCS  I + ++++  N  ++
Sbjct:   66 HEEMLKDEVRTVTYRNAMYHNKHLFQGKTVLDVGCGTGILSMFAAKAGAAQVIAVDCSNIIEFARQVVIDNNLQD 140

[Close]

BLAST of SMED30019769 vs. Ensembl Fly
Match: Art3 (gene:FBgn0038306 transcript:FBtr0083135)

HSP 1 Score: 52.7582 bits (125), Expect = 4.900e-9
Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = -2

Query:   66 HDEML--KVQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETE 281
            H EML  KV+T TY+ SL  +  +V+ K VLDV  GTGIL +F  K  A +V G D S  +    +II+ N+ E
Sbjct:  176 HHEMLSDKVRTSTYRASLLQNEAVVRGKTVLDVGCGTGILSIFASKAGAARVVGIDNSDIVYTAMDIIRKNKVE 249

[Close]

BLAST of SMED30019769 vs. Ensembl Fly
Match: Art3 (gene:FBgn0038306 transcript:FBtr0083134)

HSP 1 Score: 52.373 bits (124), Expect = 5.095e-9
Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = -2

Query:   66 HDEML--KVQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETE 281
            H EML  KV+T TY+ SL  +  +V+ K VLDV  GTGIL +F  K  A +V G D S  +    +II+ N+ E
Sbjct:  218 HHEMLSDKVRTSTYRASLLQNEAVVRGKTVLDVGCGTGILSIFASKAGAARVVGIDNSDIVYTAMDIIRKNKVE 291

[Close]

BLAST of SMED30019769 vs. Ensembl Fly
Match: Art6 (gene:FBgn0038189 transcript:FBtr0082878)

HSP 1 Score: 51.2174 bits (121), Expect = 1.273e-8
Identity = 28/74 (37.84%), Postives = 43/74 (58.11%), Query Frame = -2

Query:   66 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETE 281
            H  ML+  V+   ++D++  D  L +DK+VLDV  GTGIL +F  +  A KV   +C+      +EII+ N+ E
Sbjct:   29 HMNMLRDSVRMQAFRDAIVQDGGLFQDKIVLDVGCGTGILSLFAAEAGASKVIAVECTDIADIAEEIIRDNQKE 102

[Close]

BLAST of SMED30019769 vs. Ensembl Fly
Match: Art4 (gene:FBgn0037770 transcript:FBtr0082150)

HSP 1 Score: 46.2098 bits (108), Expect = 7.804e-7
Identity = 24/78 (30.77%), Postives = 45/78 (57.69%), Query Frame = -2

Query:   30 VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEEKLHWLSVKLRK 263
            V+T TYQ ++  +    +DK+VLDV  G+GIL  F ++  A KV   + S    Y ++++++N  + K+  +  K+ +
Sbjct:  162 VRTSTYQRAILGNAVDFQDKIVLDVGAGSGILSFFAVQAGAAKVYAIEASNMAQYAQQLVESNNVQHKISVIPGKIEE 239

[Close]

BLAST of SMED30019769 vs. Ensembl Zebrafish
Match: prmt1 (protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693])

HSP 1 Score: 79.337 bits (194), Expect = 5.170e-19
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = -2

Query:   72 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y  +I+KAN+
Sbjct:   74 HEEMLKDEVRTLTYRNSMFHNKHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAVKIVKANK 145

[Close]

BLAST of SMED30019769 vs. Ensembl Zebrafish
Match: prmt1 (protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693])

HSP 1 Score: 79.337 bits (194), Expect = 1.806e-18
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = -2

Query:   72 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y  +I+KAN+
Sbjct:   40 HEEMLKDEVRTLTYRNSMFHNKHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAVKIVKANK 111

[Close]

BLAST of SMED30019769 vs. Ensembl Zebrafish
Match: PRMT8 (protein arginine N-methyltransferase 8-B-like [Source:NCBI gene;Acc:556054])

HSP 1 Score: 77.7962 bits (190), Expect = 6.972e-18
Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = -2

Query:   66 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETE 281
            H+EMLK  V+TLTY++S+YH+ H+ KDK+VLDV  GTGIL MF  K  AK V G +CS    Y ++IIKAN  +
Sbjct:  102 HEEMLKDEVRTLTYRNSMYHNKHIFKDKIVLDVGSGTGILSMFAAKAGAKHVYGIECSSISEYSEKIIKANHLD 175

[Close]

BLAST of SMED30019769 vs. Ensembl Zebrafish
Match: prmt8b (protein arginine methyltransferase 8b [Source:NCBI gene;Acc:564110])

HSP 1 Score: 77.7962 bits (190), Expect = 8.977e-18
Identity = 40/71 (56.34%), Postives = 52/71 (73.24%), Query Frame = -2

Query:   75 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKAN 281
            H+EMLK  V+TLTY++S+YH+ H+ KDK+VLDV  GTGIL MF  K  AK V G +CS    Y ++IIK+N
Sbjct:  111 HEEMLKDEVRTLTYRNSMYHNKHIFKDKIVLDVGSGTGILSMFAAKAGAKHVYGIECSSISEYSEKIIKSN 181

[Close]

BLAST of SMED30019769 vs. Ensembl Zebrafish
Match: prmt8b (protein arginine methyltransferase 8b [Source:NCBI gene;Acc:564110])

HSP 1 Score: 77.7962 bits (190), Expect = 9.000e-18
Identity = 40/71 (56.34%), Postives = 52/71 (73.24%), Query Frame = -2

Query:   75 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKAN 281
            H+EMLK  V+TLTY++S+YH+ H+ KDK+VLDV  GTGIL MF  K  AK V G +CS    Y ++IIK+N
Sbjct:  112 HEEMLKDEVRTLTYRNSMYHNKHIFKDKIVLDVGSGTGILSMFAAKAGAKHVYGIECSSISEYSEKIIKSN 182

[Close]

BLAST of SMED30019769 vs. Ensembl Xenopus
Match: PRMT8 (protein arginine methyltransferase 8 [Source:NCBI gene;Acc:100491340])

HSP 1 Score: 80.8777 bits (198), Expect = 7.847e-19
Identity = 42/71 (59.15%), Postives = 53/71 (74.65%), Query Frame = -2

Query:   75 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKAN 281
            H+EMLK  V+TLTY++S+YH+ H+ KDKVVLDV  GTGIL MF  K  A+KV G +CS    Y ++IIKAN
Sbjct:   88 HEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGILSMFAAKAGARKVYGIECSSVSDYSEKIIKAN 158

[Close]

BLAST of SMED30019769 vs. Ensembl Xenopus
Match: il1rap (interleukin 1 receptor accessory protein [Source:Xenbase;Acc:XB-GENE-492428])

HSP 1 Score: 79.337 bits (194), Expect = 2.280e-18
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = -2

Query:   72 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y  +I+KAN+
Sbjct:   43 HEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAIKIVKANK 114

[Close]

BLAST of SMED30019769 vs. Ensembl Xenopus
Match: il1rap (interleukin 1 receptor accessory protein [Source:Xenbase;Acc:XB-GENE-492428])

HSP 1 Score: 79.337 bits (194), Expect = 2.333e-18
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = -2

Query:   72 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y  +I+KAN+
Sbjct:   39 HEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAIKIVKANK 110

[Close]

BLAST of SMED30019769 vs. Ensembl Xenopus
Match: il1rap (interleukin 1 receptor accessory protein [Source:Xenbase;Acc:XB-GENE-492428])

HSP 1 Score: 79.337 bits (194), Expect = 2.378e-18
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = -2

Query:   72 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y  +I+KAN+
Sbjct:   51 HEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAIKIVKANK 122

[Close]

BLAST of SMED30019769 vs. Ensembl Xenopus
Match: il1rap (interleukin 1 receptor accessory protein [Source:Xenbase;Acc:XB-GENE-492428])

HSP 1 Score: 79.337 bits (194), Expect = 2.447e-18
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = -2

Query:   72 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y  +I+KAN+
Sbjct:   61 HEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAIKIVKANK 132

[Close]

BLAST of SMED30019769 vs. Ensembl Mouse
Match: Prmt1 (protein arginine N-methyltransferase 1 [Source:MGI Symbol;Acc:MGI:107846])

HSP 1 Score: 82.4185 bits (202), Expect = 2.282e-21
Identity = 42/79 (53.16%), Postives = 55/79 (69.62%), Query Frame = -2

Query:   51 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEEKLHW 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  A+KV G +CS    Y  +I+KAN+ +    W
Sbjct:   21 HEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHGTRW 99

[Close]

BLAST of SMED30019769 vs. Ensembl Mouse
Match: Prmt1 (protein arginine N-methyltransferase 1 [Source:MGI Symbol;Acc:MGI:107846])

HSP 1 Score: 79.7221 bits (195), Expect = 2.981e-19
Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = -2

Query:   72 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  A+KV G +CS    Y  +I+KAN+
Sbjct:   45 HEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANK 116

[Close]

BLAST of SMED30019769 vs. Ensembl Mouse
Match: Prmt8 (protein arginine N-methyltransferase 8 [Source:MGI Symbol;Acc:MGI:3043083])

HSP 1 Score: 81.6481 bits (200), Expect = 3.265e-19
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = -2

Query:   75 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKAN 281
            H+EMLK  V+TLTY++S+YH+ H+ KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y ++IIKAN
Sbjct:   86 HEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGILSMFAAKAGAKKVFGIECSSISDYSEKIIKAN 156

[Close]

BLAST of SMED30019769 vs. Ensembl Mouse
Match: Prmt1 (protein arginine N-methyltransferase 1 [Source:MGI Symbol;Acc:MGI:107846])

HSP 1 Score: 79.337 bits (194), Expect = 6.011e-19
Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = -2

Query:   72 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  A+KV G +CS    Y  +I+KAN+
Sbjct:   45 HEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANK 116

[Close]

BLAST of SMED30019769 vs. Ensembl Mouse
Match: Prmt1 (protein arginine N-methyltransferase 1 [Source:MGI Symbol;Acc:MGI:107846])

HSP 1 Score: 79.337 bits (194), Expect = 2.072e-18
Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = -2

Query:   72 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  A+KV G +CS    Y  +I+KAN+
Sbjct:   63 HEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANK 134

[Close]

BLAST of SMED30019769 vs. UniProt/SwissProt
Match: sp|Q6PAK3|ANM8_MOUSE (Protein arginine N-methyltransferase 8 OS=Mus musculus OX=10090 GN=Prmt8 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.284e-18
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = -2

Query:   75 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKAN 281
            H+EMLK  V+TLTY++S+YH+ H+ KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y ++IIKAN
Sbjct:   86 HEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGILSMFAAKAGAKKVFGIECSSISDYSEKIIKAN 156

[Close]

BLAST of SMED30019769 vs. UniProt/SwissProt
Match: sp|Q9NR22|ANM8_HUMAN (Protein arginine N-methyltransferase 8 OS=Homo sapiens OX=9606 GN=PRMT8 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 2.789e-18
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = -2

Query:   75 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKAN 281
            H+EMLK  V+TLTY++S+YH+ H+ KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y ++IIKAN
Sbjct:   86 HEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGILSMFAAKAGAKKVFGIECSSISDYSEKIIKAN 156

[Close]

BLAST of SMED30019769 vs. UniProt/SwissProt
Match: sp|Q28F07|ANM1_XENTR (Protein arginine N-methyltransferase 1 OS=Xenopus tropicalis OX=8364 GN=prmt1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.208e-17
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = -2

Query:   72 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y  +I+KAN+
Sbjct:   43 HEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAIKIVKANK 114

[Close]

BLAST of SMED30019769 vs. UniProt/SwissProt
Match: sp|Q8AV13|ANM1A_XENLA (Protein arginine N-methyltransferase 1-A OS=Xenopus laevis OX=8355 GN=prmt1-a PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.363e-17
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = -2

Query:   72 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y  +I+KAN+
Sbjct:   61 HEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAIKIVKANK 132

[Close]

BLAST of SMED30019769 vs. UniProt/SwissProt
Match: sp|Q6VRB0|ANM1B_XENLA (Protein arginine N-methyltransferase 1-B OS=Xenopus laevis OX=8355 GN=prmt1-b PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.420e-17
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = -2

Query:   72 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y  +I+KAN+
Sbjct:   43 HEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAIKIVKANK 114

[Close]

BLAST of SMED30019769 vs. TrEMBL
Match: A0A4Y5WRE5 (Protein arginine methyltransferase 1 OS=Dugesia japonica OX=6161 GN=Prmt1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.261e-21
Identity = 51/77 (66.23%), Postives = 61/77 (79.22%), Query Frame = -2

Query:   57 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEEKL 281
            H+EMLK  V+TLTY+++LYH+ HLVKDKVVLDV  GTGIL MF +K  AKKV G DCS  I Y KEIIKAN+ E+K+
Sbjct:   32 HEEMLKDEVRTLTYRNALYHNKHLVKDKVVLDVGCGTGILCMFAVKAGAKKVIGIDCSNIIDYAKEIIKANKMEDKI 108

[Close]

BLAST of SMED30019769 vs. TrEMBL
Match: H2ESD9 (Protein arginine methyltransferase 1-like protein OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.607e-20
Identity = 49/76 (64.47%), Postives = 60/76 (78.95%), Query Frame = -2

Query:   57 DEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEEKL 278
            +EMLK  V+TLTY+++LYH+ HLVKDKVVLDV  GTGIL MF +K  A+KV G DCS  I Y KEIIKAN+ E+K+
Sbjct:   33 EEMLKDEVRTLTYRNALYHNKHLVKDKVVLDVGCGTGILCMFAVKAGARKVIGIDCSNIIDYAKEIIKANKMEDKI 108

[Close]

BLAST of SMED30019769 vs. TrEMBL
Match: H2ESE0 (Protein arginine methyltransferase 1-like protein OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.636e-19
Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = -2

Query:   57 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEEKL 281
            H+EMLK  ++T++Y+++LYH+ HLVKDKVVLDV  GTGIL MF ++  AK+V G DCS  I Y KEI+KAN+ + K+
Sbjct:   30 HEEMLKDEIRTISYRNALYHNEHLVKDKVVLDVGCGTGILCMFAVRAGAKRVIGIDCSNIIDYAKEIVKANKMDTKI 106

[Close]

BLAST of SMED30019769 vs. TrEMBL
Match: A0A140LIF7 (Protein arginine N-methyltransferase 1 (Fragment) OS=Mus musculus OX=10090 GN=Prmt1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.732e-18
Identity = 42/79 (53.16%), Postives = 55/79 (69.62%), Query Frame = -2

Query:   51 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEEKLHW 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  A+KV G +CS    Y  +I+KAN+ +    W
Sbjct:   21 HEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHGTRW 99

[Close]

BLAST of SMED30019769 vs. TrEMBL
Match: A0A4U1FEC0 (Uncharacterized protein OS=Monodon monoceros OX=40151 GN=EI555_016437 PE=4 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.546e-17
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = -2

Query:   75 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKAN 281
            H+EMLK  V+TLTY++S+YH+ H+ KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y ++IIKAN
Sbjct:   26 HEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGILSMFAAKAGAKKVFGIECSSISDYSEKIIKAN 96

[Close]

BLAST of SMED30019769 vs. Ensembl Cavefish
Match: prmt1 (protein arginine methyltransferase 1 [Source:NCBI gene;Acc:103022674])

HSP 1 Score: 79.337 bits (194), Expect = 1.485e-18
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = -2

Query:   72 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 281
            H+EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y  +I+KAN+
Sbjct:   54 HEEMLKDEVRTLTYRNSMFHNKHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAVKIVKANK 125

[Close]

BLAST of SMED30019769 vs. Ensembl Cavefish
Match: prmt8b (protein arginine N-methyltransferase 8-B [Source:NCBI gene;Acc:103024775])

HSP 1 Score: 79.337 bits (194), Expect = 2.170e-18
Identity = 41/71 (57.75%), Postives = 52/71 (73.24%), Query Frame = -2

Query:   75 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKAN 281
            H+EMLK  V+TLTY++S+YH+ HL KDK+VLDV  GTGIL MF  K  AK V G +CS    Y ++IIK+N
Sbjct:  105 HEEMLKDEVRTLTYRNSMYHNKHLFKDKIVLDVGSGTGILSMFAAKAGAKHVYGIECSSISEYSEKIIKSN 175

[Close]

BLAST of SMED30019769 vs. Ensembl Cavefish
Match: prmt1 (protein arginine methyltransferase 1 [Source:NCBI gene;Acc:103022674])

HSP 1 Score: 75.8702 bits (185), Expect = 1.984e-17
Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = -2

Query:   72 EMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANE 275
            EMLK  V+TLTY++S++H+ HL KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y  +I+KAN+
Sbjct:   10 EMLKDEVRTLTYRNSMFHNKHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAVKIVKANK 79

[Close]

BLAST of SMED30019769 vs. Ensembl Cavefish
Match: prmt3 (protein arginine methyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041105-1])

HSP 1 Score: 58.5362 bits (140), Expect = 4.871e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -2

Query:   57 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEEKL 281
            H+EMLK  V+T +Y+D +Y +  + KDKVVLDV  GTGIL MF  +  AKKV   D S+ I    +I+++N+ E  +
Sbjct:  229 HEEMLKDTVRTESYRDFIYGNPDVFKDKVVLDVGCGTGILSMFAARSGAKKVIAVDQSEIIYQAIDIVRSNQLENTI 305

[Close]

BLAST of SMED30019769 vs. Ensembl Cavefish
Match: carm1l (histone-arginine methyltransferase CARM1 [Source:NCBI gene;Acc:103023409])

HSP 1 Score: 45.8246 bits (107), Expect = 1.168e-6
Identity = 24/78 (30.77%), Postives = 47/78 (60.26%), Query Frame = -2

Query:   30 VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEEKLHWLSVKLRK 263
            ++T TYQ ++  ++   +DKVVLDV  GTGIL  F ++  AK+V   + S    + + ++++N   +++  L+ K+ +
Sbjct:  149 LRTATYQKAILLNDVDFRDKVVLDVGCGTGILSFFAVQAGAKRVYAVEASSVAKHAEVLVRSNGMSDRITVLNGKIEE 226

[Close]

BLAST of SMED30019769 vs. Ensembl Sea Lamprey
Match: prmt1 (protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693])

HSP 1 Score: 81.2629 bits (199), Expect = 6.248e-20
Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = -2

Query:   75 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKAN 281
            H+EMLK  V+T TY++++YH+ HL KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y ++IIKAN
Sbjct:   43 HEEMLKDEVRTRTYRNAMYHNRHLFKDKVVLDVGSGTGILCMFAAKAGAKKVFGIECSNIADYSQQIIKAN 113

[Close]

BLAST of SMED30019769 vs. Ensembl Sea Lamprey
Match: carm1 (coactivator-associated arginine methyltransferase 1 [Source:NCBI gene;Acc:445251])

HSP 1 Score: 45.4394 bits (106), Expect = 3.604e-7
Identity = 20/69 (28.99%), Postives = 43/69 (62.32%), Query Frame = -2

Query:   57 VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEEKL 263
            ++T TYQ ++  ++   +DK+VLDV  G+GIL  F ++  A+KV   + S    + + ++++N  ++++
Sbjct:  143 IRTGTYQRAILQNHADFRDKIVLDVGCGSGILSFFAVQAGARKVYAVEASSMAQHAEVLVRSNNLQDRI 211

[Close]

BLAST of SMED30019769 vs. Ensembl Yeast
Match: HMT1 (Nuclear SAM-dependent mono- and asymmetric methyltransferase; modifies hnRNPs, including Npl3p and Hrp1p, affecting their activity and nuclear export; methylates U1 snRNP protein Snp1p, ribosomal protein Rps2p, and histones H3 and H4; interacts genetically with genes encoding components of Rpd3(L) and this interaction is important for Rpd3 recruitment to the subtelomeric region [Source:SGD;Acc:S000000238])

HSP 1 Score: 62.003 bits (149), Expect = 2.914e-13
Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = -2

Query:   36 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEEKLHWLSVKL 281
            H+EML+  V+TL+Y++++  +  L KDK+VLDV  GTGIL MF  K  AK V G D S  I   KE+++ N   +K+  L  KL
Sbjct:   33 HEEMLQDTVRTLSYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKL 116

[Close]

BLAST of SMED30019769 vs. Ensembl Nematostella
Match: EDO47611 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RLI7])

HSP 1 Score: 72.4034 bits (176), Expect = 2.011e-16
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = -2

Query:   75 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKAN 281
            H+EMLK  V+TLTY++S+YH+ HL +DK+VLDV  GTGIL MF  K  AK V   + S  + Y K IIK N
Sbjct:   72 HEEMLKDEVRTLTYRNSMYHNKHLFRDKIVLDVGCGTGILSMFAAKAGAKHVYAIEMSSIVDYSKTIIKDN 142

[Close]

BLAST of SMED30019769 vs. Ensembl Nematostella
Match: EDO49961 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RER6])

HSP 1 Score: 58.5362 bits (140), Expect = 1.562e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -2

Query:   57 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEEKL 281
            H+EMLK  V+T +Y+D +Y +  + KDKVVLDV  GTGIL MF  +  A++V G D S+ I    +II+ N  E+ +
Sbjct:  233 HEEMLKDKVRTESYRDFIYGNPDIFKDKVVLDVGCGTGILSMFAARSGARQVIGIDQSEIIYQAMDIIRENGFEKTI 309

[Close]

BLAST of SMED30019769 vs. Ensembl Medaka
Match: prmt1 (protein arginine methyltransferase 1 [Source:NCBI gene;Acc:101173551])

HSP 1 Score: 77.411 bits (189), Expect = 4.428e-18
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = -2

Query:   63 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEE 281
            H+EMLK  V+TLTY++S++++ HL KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y  +I+KAN  ++
Sbjct:   44 HEEMLKDEVRTLTYRNSMFYNKHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAVKIVKANNMDD 118

[Close]

BLAST of SMED30019769 vs. Ensembl Medaka
Match: ENSORLT00000018691.2 (protein arginine N-methyltransferase 8-B [Source:NCBI gene;Acc:101162208])

HSP 1 Score: 77.7962 bits (190), Expect = 5.329e-18
Identity = 40/71 (56.34%), Postives = 52/71 (73.24%), Query Frame = -2

Query:   75 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKAN 281
            H+EMLK  V+TLTY++S+YH+ H+ KDK+VLDV  GTGIL MF  K  AK V G +CS    Y ++IIK+N
Sbjct:   76 HEEMLKDEVRTLTYRNSMYHNKHVFKDKIVLDVGSGTGILSMFAAKAGAKHVYGIECSSISEYSEKIIKSN 146

[Close]

BLAST of SMED30019769 vs. Ensembl Medaka
Match: ENSORLT00000020054.2 (protein arginine N-methyltransferase 8-B [Source:NCBI gene;Acc:101162208])

HSP 1 Score: 77.7962 bits (190), Expect = 6.812e-18
Identity = 40/74 (54.05%), Postives = 53/74 (71.62%), Query Frame = -2

Query:   66 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETE 281
            H+EMLK  V+TLTY++S+YH+ H+ KDK+VLDV  GTGIL MF  K  AK V G +CS    Y ++IIK+N  +
Sbjct:  102 HEEMLKDEVRTLTYRNSMYHNKHVFKDKIVLDVGSGTGILSMFAAKAGAKHVYGIECSSISEYSEKIIKSNHLD 175

[Close]

BLAST of SMED30019769 vs. Ensembl Medaka
Match: prmt1 (protein arginine methyltransferase 1 [Source:NCBI gene;Acc:101173551])

HSP 1 Score: 77.411 bits (189), Expect = 8.230e-18
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = -2

Query:   63 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEE 281
            H+EMLK  V+TLTY++S++++ HL KDKVVLDV  GTGIL MF  K  AKKV G +CS    Y  +I+KAN  ++
Sbjct:   40 HEEMLKDEVRTLTYRNSMFYNKHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAVKIVKANNMDD 114

[Close]

BLAST of SMED30019769 vs. Ensembl Medaka
Match: prmt8b (protein arginine N-methyltransferase 8-B [Source:NCBI gene;Acc:101155736])

HSP 1 Score: 74.3294 bits (181), Expect = 1.292e-16
Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = -2

Query:   75 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKAN 281
            H+EMLK  V+TLTY++++YH+ H+ KDK+VLDV  GTGIL MF     AK V G +CS    Y ++IIK+N
Sbjct:   97 HEEMLKDEVRTLTYRNAMYHNKHVFKDKIVLDVGSGTGILSMFAANAGAKHVYGIECSSISEYSEKIIKSN 167

[Close]

BLAST of SMED30019769 vs. Planmine SMEST
Match: SMESG000038804.1 (SMESG000038804.1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.330e-24
Identity = 50/77 (64.94%), Postives = 61/77 (79.22%), Query Frame = -2

Query:   57 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEEKL 281
            H+EMLK  V+TLTY+++LYH+ HLVKDKVVLDV  GTGIL MF +K  A+KV G DCS  I Y KEIIKAN+ E+K+
Sbjct:   32 HEEMLKDEVRTLTYRNALYHNKHLVKDKVVLDVGCGTGILCMFAVKAGARKVIGIDCSNIIDYAKEIIKANKMEDKI 108

[Close]

BLAST of SMED30019769 vs. Planmine SMEST
Match: SMESG000038790.1 (SMESG000038790.1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.625e-22
Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = -2

Query:   57 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEEKL 281
            H+EMLK  ++T++Y+++LYH+ HLVKDKVVLDV  GTGIL MF ++  AK+V G DCS  I Y KEI+KAN+ + K+
Sbjct:   22 HEEMLKDEIRTISYRNALYHNEHLVKDKVVLDVGCGTGILCMFAVRAGAKRVIGIDCSNIIDYAKEIVKANKMDTKI 98

[Close]

BLAST of SMED30019769 vs. Planmine SMEST
Match: SMESG000038790.1 (SMESG000038790.1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.648e-22
Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = -2

Query:   57 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEEKL 281
            H+EMLK  ++T++Y+++LYH+ HLVKDKVVLDV  GTGIL MF ++  AK+V G DCS  I Y KEI+KAN+ + K+
Sbjct:   29 HEEMLKDEIRTISYRNALYHNEHLVKDKVVLDVGCGTGILCMFAVRAGAKRVIGIDCSNIIDYAKEIVKANKMDTKI 105

[Close]

BLAST of SMED30019769 vs. Planmine SMEST
Match: SMESG000038790.1 (SMESG000038790.1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.714e-22
Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = -2

Query:   57 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEEKL 281
            H+EMLK  ++T++Y+++LYH+ HLVKDKVVLDV  GTGIL MF ++  AK+V G DCS  I Y KEI+KAN+ + K+
Sbjct:   22 HEEMLKDEIRTISYRNALYHNEHLVKDKVVLDVGCGTGILCMFAVRAGAKRVIGIDCSNIIDYAKEIVKANKMDTKI 98

[Close]

BLAST of SMED30019769 vs. Planmine SMEST
Match: SMESG000038790.1 (SMESG000038790.1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.846e-22
Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = -2

Query:   57 HDEMLK--VQTLTYQDSLYHDNHLVKDKVVLDVEYGTGILYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEEKL 281
            H+EMLK  ++T++Y+++LYH+ HLVKDKVVLDV  GTGIL MF ++  AK+V G DCS  I Y KEI+KAN+ + K+
Sbjct:   29 HEEMLKDEIRTISYRNALYHNEHLVKDKVVLDVGCGTGILCMFAVRAGAKRVIGIDCSNIIDYAKEIVKANKMDTKI 105

The following BLAST results are available for this feature:

BLAST of SMED30019769 vs. Ensembl Human
BLAST of SMED30019769 vs. Ensembl Celegans
BLAST of SMED30019769 vs. Ensembl Fly
BLAST of SMED30019769 vs. Ensembl Zebrafish
BLAST of SMED30019769 vs. Ensembl Xenopus
BLAST of SMED30019769 vs. Ensembl Mouse
BLAST of SMED30019769 vs. UniProt/SwissProt
BLAST of SMED30019769 vs. TrEMBL
BLAST of SMED30019769 vs. Ensembl Cavefish
BLAST of SMED30019769 vs. Ensembl Sea Lamprey
BLAST of SMED30019769 vs. Ensembl Yeast
BLAST of SMED30019769 vs. Ensembl Nematostella
BLAST of SMED30019769 vs. Ensembl Medaka
BLAST of SMED30019769 vs. Planmine SMEST

BLAST of SMED30019769 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
PRMT1	4.186e-20	56.94	protein arginine methyltransferase 1 [Source:HGNC ...	[more]
PRMT1	2.087e-19	56.94	protein arginine methyltransferase 1 [Source:HGNC ...	[more]
PRMT1	2.087e-19	56.94	protein arginine methyltransferase 1 [Source:HGNC ...	[more]
PRMT1	5.201e-19	56.94	protein arginine methyltransferase 1 [Source:HGNC ...	[more]
PRMT8	5.809e-19	60.56	protein arginine methyltransferase 8 [Source:HGNC ...	[more]

BLAST of SMED30019769 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2


Match Name	E-value	Identity	Description
prmt-1	3.537e-14	52.11	Protein arginine N-methyltransferase 1 [Source:Un...	[more]
prmt-1	3.537e-14	52.11	Protein arginine N-methyltransferase 1 [Source:Un...	[more]

BLAST of SMED30019769 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Art1	3.390e-14	44.00	gene:FBgn0037834 transcript:FBtr0082304	[more]
Art3	4.900e-9	44.59	gene:FBgn0038306 transcript:FBtr0083135	[more]
Art3	5.095e-9	44.59	gene:FBgn0038306 transcript:FBtr0083134	[more]
Art6	1.273e-8	37.84	gene:FBgn0038189 transcript:FBtr0082878	[more]
Art4	7.804e-7	30.77	gene:FBgn0037770 transcript:FBtr0082150	[more]

BLAST of SMED30019769 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
prmt1	5.170e-19	58.33	protein arginine methyltransferase 1 [Source:ZFIN;...	[more]
prmt1	1.806e-18	58.33	protein arginine methyltransferase 1 [Source:ZFIN;...	[more]
PRMT8	6.972e-18	55.41	protein arginine N-methyltransferase 8-B-like [Sou...	[more]
prmt8b	8.977e-18	56.34	protein arginine methyltransferase 8b [Source:NCBI...	[more]
prmt8b	9.000e-18	56.34	protein arginine methyltransferase 8b [Source:NCBI...	[more]

BLAST of SMED30019769 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
PRMT8	7.847e-19	59.15	protein arginine methyltransferase 8 [Source:NCBI ...	[more]
il1rap	2.280e-18	58.33	interleukin 1 receptor accessory protein [Source:X...	[more]
il1rap	2.333e-18	58.33	interleukin 1 receptor accessory protein [Source:X...	[more]
il1rap	2.378e-18	58.33	interleukin 1 receptor accessory protein [Source:X...	[more]
il1rap	2.447e-18	58.33	interleukin 1 receptor accessory protein [Source:X...	[more]

BLAST of SMED30019769 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Prmt1	2.282e-21	53.16	protein arginine N-methyltransferase 1 [Source:MGI...	[more]
Prmt1	2.981e-19	56.94	protein arginine N-methyltransferase 1 [Source:MGI...	[more]
Prmt8	3.265e-19	60.56	protein arginine N-methyltransferase 8 [Source:MGI...	[more]
Prmt1	6.011e-19	56.94	protein arginine N-methyltransferase 1 [Source:MGI...	[more]
Prmt1	2.072e-18	56.94	protein arginine N-methyltransferase 1 [Source:MGI...	[more]

BLAST of SMED30019769 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q6PAK3\|ANM8_MOUSE	2.284e-18	60.56	Protein arginine N-methyltransferase 8 OS=Mus musc...	[more]
sp\|Q9NR22\|ANM8_HUMAN	2.789e-18	60.56	Protein arginine N-methyltransferase 8 OS=Homo sap...	[more]
sp\|Q28F07\|ANM1_XENTR	1.208e-17	58.33	Protein arginine N-methyltransferase 1 OS=Xenopus ...	[more]
sp\|Q8AV13\|ANM1A_XENLA	1.363e-17	58.33	Protein arginine N-methyltransferase 1-A OS=Xenopu...	[more]
sp\|Q6VRB0\|ANM1B_XENLA	1.420e-17	58.33	Protein arginine N-methyltransferase 1-B OS=Xenopu...	[more]

BLAST of SMED30019769 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A4Y5WRE5	3.261e-21	66.23	Protein arginine methyltransferase 1 OS=Dugesia ja...	[more]
H2ESD9	5.607e-20	64.47	Protein arginine methyltransferase 1-like protein ...	[more]
H2ESE0	6.636e-19	57.14	Protein arginine methyltransferase 1-like protein ...	[more]
A0A140LIF7	4.732e-18	53.16	Protein arginine N-methyltransferase 1 (Fragment) ...	[more]
A0A4U1FEC0	2.546e-17	60.56	Uncharacterized protein OS=Monodon monoceros OX=40...	[more]

BLAST of SMED30019769 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
prmt1	1.485e-18	58.33	protein arginine methyltransferase 1 [Source:NCBI ...	[more]
prmt8b	2.170e-18	57.75	protein arginine N-methyltransferase 8-B [Source:N...	[more]
prmt1	1.984e-17	58.57	protein arginine methyltransferase 1 [Source:NCBI ...	[more]
prmt3	4.871e-11	45.45	protein arginine methyltransferase 3 [Source:ZFIN;...	[more]
carm1l	1.168e-6	30.77	histone-arginine methyltransferase CARM1 [Source:N...	[more]

BLAST of SMED30019769 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2


Match Name	E-value	Identity	Description
prmt1	6.248e-20	59.15	protein arginine methyltransferase 1 [Source:ZFIN;...	[more]
carm1	3.604e-7	28.99	coactivator-associated arginine methyltransferase ...	[more]

BLAST of SMED30019769 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1


Match Name	E-value	Identity	Description
HMT1	2.914e-13	45.24	Nuclear SAM-dependent mono- and asymmetric methylt...	[more]

BLAST of SMED30019769 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2


Match Name	E-value	Identity	Description
EDO47611	2.011e-16	54.93	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO49961	1.562e-11	45.45	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of SMED30019769 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
prmt1	4.428e-18	54.67	protein arginine methyltransferase 1 [Source:NCBI ...	[more]
ENSORLT00000018691.2	5.329e-18	56.34	protein arginine N-methyltransferase 8-B [Source:N...	[more]
ENSORLT00000020054.2	6.812e-18	54.05	protein arginine N-methyltransferase 8-B [Source:N...	[more]
prmt1	8.230e-18	54.67	protein arginine methyltransferase 1 [Source:NCBI ...	[more]
prmt8b	1.292e-16	53.52	protein arginine N-methyltransferase 8-B [Source:N...	[more]

BLAST of SMED30019769 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000038804.1	1.330e-24	64.94	SMESG000038804.1	[more]
SMESG000038790.1	1.625e-22	57.14	SMESG000038790.1	[more]
SMESG000038790.1	1.648e-22	57.14	SMESG000038790.1	[more]
SMESG000038790.1	1.714e-22	57.14	SMESG000038790.1	[more]
SMESG000038790.1	1.846e-22	57.14	SMESG000038790.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30019769 ID=SMED30019769|Name=SMED30019769|organism=Schmidtea mediterranea sexual|type=transcript|length=321bp
CTCATTTAAGGTATCATCTAGTAACAGAACTTCCTCAACTTTACACTTAA
CCAATGCAACTTTTCTTCCGTTTCATTAGCTTTTATTATTTCTTTTTCAT
AACCAATTTTTTTAGAACAATCATTACCATTGACTTTCTTAGCATCAATT
TTAATTTCGAACATGTAAAGTATACCAGTTCCATATTCAACATCTAATAC
AACTTTGTCTTTCACTAGATGATTATCATGGTACAAAGAATCTTGATAAG
TTAAAGTTTGGACTTTTAGCATTTCGTCATGGATCCCAAAAATGAACATA
TAAATCGAAATAATAATCTTT

protein sequence of SMED30019769-orf-1

>SMED30019769-orf-1 ID=SMED30019769-orf-1|Name=SMED30019769-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=101bp
KIIISIYMFIFGIHDEMLKVQTLTYQDSLYHDNHLVKDKVVLDVEYGTGI
LYMFEIKIDAKKVNGNDCSKKIGYEKEIIKANETEEKLHWLSVKLRKFCY
*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000136	whole organism

Vocabulary: **INTERPRO**
Term	Definition
IPR029063	SAM-dependent_MTases

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	TMHMM	TMhelix		coord: 7..29

Main menu

SMED30019769

Zeng et. al., 2018

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 2

Owlery

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