CS domain-containing protein

Overview
NameCS domain-containing protein
Smed IDSMED30019763
Length (bp)1769
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of CS domain-containing protein (SMED30019763) t-SNE clustered cells

Violin plots show distribution of expression levels for CS domain-containing protein (SMED30019763) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of CS domain-containing protein (SMED30019763) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for CS domain-containing protein (SMED30019763) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30019763

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 10

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
muscle progenitor cellSMED30019763SMESG000078259.1 SMESG000075881.1 SMESG000064589.1 SMESG000031042.1 SMESG000029607.1 SMESG000021352.1 SMESG000004064.1 SMED30019763smed_20140614PMID:29906446
Zeng et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
X1 cellSMED30019763SMESG000078259.1 SmedASXL_014951SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30019763SMESG000078259.1 SmedASXL_014951SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X1 cellSMED30019763SMESG000078259.1 SMESG000075881.1 SMESG000064589.1 SMESG000031042.1 SMESG000029607.1 SMESG000021352.1 SMESG000004064.1 SmedASXL_014952SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30019763SMESG000078259.1 SMESG000075881.1 SMESG000064589.1 SMESG000031042.1 SMESG000029607.1 SMESG000021352.1 SMESG000004064.1 SmedASXL_014952SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
nervous systemSMED30019763SMESG000078259.1 SMESG000075881.1 SMESG000064589.1 SMESG000031042.1 SMESG000029607.1 SMESG000021352.1 SMESG000004064.1 dd_Smed_v4_3736_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30019763SMESG000078259.1 SMESG000075881.1 SMESG000064589.1 SMESG000031042.1 SMESG000029607.1 SMESG000021352.1 SMESG000004064.1 dd_Smed_v4_3736_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30019763SMESG000078259.1 SMESG000075881.1 SMESG000064589.1 SMESG000031042.1 SMESG000029607.1 SMESG000021352.1 SMESG000004064.1 dd_Smed_v4_3736_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30019763SMESG000078259.1 SMESG000075881.1 SMESG000064589.1 SMESG000031042.1 SMESG000029607.1 SMESG000021352.1 SMESG000004064.1 dd_Smed_v4_3736_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30019763SMESG000078259.1 SMESG000075881.1 SMESG000064589.1 SMESG000031042.1 SMESG000029607.1 SMESG000021352.1 SMESG000004064.1 dd_Smed_v4_3736_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of CS domain-containing protein vs. Ensembl Human
Match: NUDCD1 (NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306])

HSP 1 Score: 102.064 bits (253), Expect = 3.688e-23
Identity = 127/552 (23.01%), Postives = 227/552 (41.12%), Query Frame = 2 
Query:   41 SLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYE-QLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEIITSTCIADN--DVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRISTNNITVNSK----NVELVWISYQFDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRYIPP--DL--NIDTLCPDNVGQLAHWCNETEQTILFEFFLNIPIEKFKLEFQYPTDQCKELVIFIILENQTQALELYRNVSVCEFDDSKTNWSMEN----ELLLIK------FRKIVSGEVDDEIV--------------------------SKKPKMVISGNEEVDDLDDSELGIGLFSGVDGSLMDDE--ISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNS--DDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQ 1543
            SL     LL+  FE Y+++L+ L     E+D  + +   ++       + AFG +N L  D +    VY+I   G++       +T  L +P  +F     ++  + +L  ++ F SS      DG G  YV+ T +R    G    + WEI+ +  + D    ++S  L    EH+              +   LLRI    + +       ++E V IS +   +K  ++I + + +G S P       D   L IVS  S  ++    DL  N+D    + + +  ++  +TE  +     L     K  ++ Q+  D     +  ++ ++Q    +LY ++     D   + W ++     E+ LIK      + ++V G+   E++                           +KP       EE D   +    +  F   DG+ +     +++  N++LF + +   E    CLR +VD LLW   +S  DD W H+ T NA GYV A+K D+KF  C+          +A + +  R ++I  Q
Sbjct:    8 SLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSWYQDSVYYIDTLGRIMNLTVMLDT-ALGKPREVFRLPTDLTACDNRLCASIHFSSSTWVTLSDGTGRLYVIGTGER----GNSASEKWEIMFNEELGDPFIIIHSISLLNAEEHS--------------IATLLLRIEKEELDMKGSGFYVSLEWVTISKKNQDNKKYEIIKRDILRGKSVPHYAAIEPDGNGLMIVSYKSLTFVQAGQDLEENMDEDISEKIKEPLYYWQQTEDDLTVTIRLPEDSTKEDIQIQFLPDH----INIVLKDHQFLEGKLYSSI-----DHESSTWIIKESNSLEISLIKKNEGLTWPELVIGDKQGELIRDSAQCAAIAERLMHLTSEELNPNPDKEKPPCNAQELEECDIFFEESSSLCRF---DGNTLKTTHVVNLGSNQYLFSVIVDPKEMPCFCLRHDVDALLWQPHSSKQDDMWEHIATFNALGYVQASKRDKKFFACA------PNYSYAALCECLRRVFIYRQ 522

HSP 2 Score: 26.9498 bits (58), Expect = 3.688e-23
Identity = 14/38 (36.84%), Postives = 21/38 (55.26%), Query Frame = 1 
Query: 1576 NRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVL 1689
            NR  G+ V  VA + + +LE +  I+G  A    +FVL
Sbjct:  532 NRKEGRQVGQVAKQQVASLETNDPILGFQATNERLFVL 569
[Close]
BLAST of CS domain-containing protein vs. Ensembl Human
Match: NUDCD1 (NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306])

HSP 1 Score: 90.5077 bits (223), Expect = 1.205e-19
Identity = 117/504 (23.21%), Postives = 208/504 (41.27%), Query Frame = 2 
Query:  185 VKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYE-QLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEIITSTCIADN--DVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRISTNNITVNSK----NVELVWISYQFDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRYIPP--DL--NIDTLCPDNVGQLAHWCNETEQTILFEFFLNIPIEKFKLEFQYPTDQCKELVIFIILENQTQALELYRNVSVCEFDDSKTNWSMEN----ELLLIK------FRKIVSGEVDDEIV--------------------------SKKPKMVISGNEEVDDLDDSELGIGLFSGVDGSLMDDE--ISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNS--DDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQ 1543
            + AFG +N L  D +    VY+I   G++       +T  L +P  +F     ++  + +L  ++ F SS      DG G  YV+ T +R    G    + WEI+ +  + D    ++S  L    EH+              +   LLRI    + +       ++E V IS +   +K  ++I + + +G S P       D   L IVS  S  ++    DL  N+D    + + +  ++  +TE  +     L     K  ++ Q+  D     +  ++ ++Q    +LY ++     D   + W ++     E+ LIK      + ++V G+   E++                           +KP       EE D   +    +  F   DG+ +     +++  N++LF + +   E    CLR +VD LLW   +S  DD W H+ T NA GYV A+K D+KF  C+ P+       +A + +  R ++I  Q
Sbjct:   27 MHAFGMYNYLHCDSWYQDSVYYIDTLGRIMNLTVMLDT-ALGKPREVFRLPTDLTACDNRLCASIHFSSSTWVTLSDGTGRLYVIGTGER----GNSASEKWEIMFNEELGDPFIIIHSISLLNAEEHS--------------IATLLLRIEKEELDMKGSGFYVSLEWVTISKKNQDNKKYEIIKRDILRGKSVPHYAAIEPDGNGLMIVSYKSLTFVQAGQDLEENMDEDISEKIKEPLYYWQQTEDDLTVTIRLPEDSTKEDIQIQFLPDH----INIVLKDHQFLEGKLYSSI-----DHESSTWIIKESNSLEISLIKKNEGLTWPELVIGDKQGELIRDSAQCAAIAERLMHLTSEELNPNPDKEKPPCNAQELEECDIFFEESSSLCRF---DGNTLKTTHVVNLGSNQYLFSVIVDPKEMPCFCLRHDVDALLWQPHSSKQDDMWEHIATFNALGYVQASKRDKKFFACA-PN-----YSYAALCECLRRVFIYRQ 493

HSP 2 Score: 26.9498 bits (58), Expect = 1.205e-19
Identity = 14/38 (36.84%), Postives = 21/38 (55.26%), Query Frame = 1 
Query: 1576 NRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVL 1689
            NR  G+ V  VA + + +LE +  I+G  A    +FVL
Sbjct:  503 NRKEGRQVGQVAKQQVASLETNDPILGFQATNERLFVL 540
[Close]
BLAST of CS domain-containing protein vs. Ensembl Celegans
Match: C44E4.5 (pep chromosome:WBcel235:I:4605655:4610202:1 gene:WBGene00016654.1 transcript:C44E4.5.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C44E4.5)

HSP 1 Score: 58.151 bits (139), Expect = 1.108e-8
Identity = 71/250 (28.40%), Postives = 118/250 (47.20%), Query Frame = 2 
Query:  866 QLAHWCNETEQTILFEFFLNIPIEKFKLEFQYPTDQCKELVIFIILENQTQALELYRN-VSVCEFDDSKTNWSMENELLLI---KFRKIVSGEVD------DEIVSK--KPKMVISGNEEVDDLDDSELGIGLFSGVD---GSLMDDEISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMT 1570
            ++ H   +T   I   F L   I K  ++        + +V  + L +   + E+  N V +C   D KTN S++ +L  I   K+ K++S E D      D  + +  K + VI  +E +++ D++E G   F  VD   G ++  +  VS ++ LF  R     P   CLR +VDGLLW+    +   +H+ TL AFGYV A+K  R +  CS P+K       A I +    + +  Q+  +  S++
Sbjct:  252 KVEHSWEQTGNIIQVAFKLKSEISKEDVKIDTTKTGIRLIVKDLTLLSGKLSGEIDENDVEICA--DQKTN-SLKLKLKSIDDKKWEKLISVEYDTLKSLEDSEIKRTMKGEQVIESDEPMEECDETE-GSMAFYWVDQESGKVLK-QCDVSGSQVLFTSRQSSTSPALICLRHDVDGLLWS--FDESAPSHVATLQAFGYVQASKTSRLWSGCS-PNK-----SLACIVEGNNRVLLYSQKVEVSGSLS 488
[Close]
BLAST of CS domain-containing protein vs. Ensembl Zebrafish
Match: nudcd1 (NudC domain containing 1 [Source:NCBI gene;Acc:553654])

HSP 1 Score: 98.2117 bits (243), Expect = 4.375e-21
Identity = 126/565 (22.30%), Postives = 228/565 (40.35%), Query Frame = 2 
Query:   41 SLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYEQLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEIITSTCIADNDVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRISTNNITVNSK--NVELVWISYQ------FDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRYI---------PPDLNIDTLCPDNVGQLAHWCNETEQTILFEFFLNIPIEKFKLEFQYPTDQCKELV--IFIILENQTQALELYRNVSVCEFDDSKTNWSM-ENELLLIKFRKIVSGEVDDEIV------------SKKPKMV----------ISGNEEVD-------DLDDSEL---GIGLFSGVDGSLM--DDEISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNSDDQ--WTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSM 1567
            SL  N +L++ +FE+YR++L  +   N E+D  + +   K+       V+AFG  N L ID +    VYF+   G+V       +T  L +P  +F  +   S+ E L  +L   S+  A   DG+G   +L T  R    G  +   WE + S  + D      ++   L H ++        +   +   LLR+  +         +V L WI+          + K   +  ++V KG S P         + + + S   F +          PP  +++    D +    ++  +TE+ +     L     K  + F+   D  +  V     +L+ Q  A            D   + W+M +++ L +  +K   G +  E+V             +K ++           ++ N E D       +L+D ++           DG+ +  ++ +S+  N++LF + +   E  + CLR +VD LLW      D   W H+ T NA GYV A+K D+KF  C+          +A + +  R ++I  Q   +D+ +
Sbjct:    7 SLNVNRELVDPNFESYRLSLDSIPTYNIELDAAVAEVKLKDSQYTLDHVRAFGMFNYLQIDPWYEDSVYFVDSKGRVLNLTVTLDT-ALGKPREMFHFESDSSSPEALCASLSLTSATWAALSDGNGKLTLLRTSKR----GESSHLKWEPMFSESLGD----PFIIVHSLAHVHS--------NVHTVEVLLLRVQKDPSDTKGSGFSVSLEWITVDNSAGQGESEEKKYAVRKRRVMKGKSVPHYAAVEPQGKGVIVASEKPFAFTEVDGLLLEEPPVQDMEVGNSDPI----YFWQQTEEDVTLCVRLPEGTTKDDIRFKLTVDCLRVRVGDYAPLLDGQLFA----------PVDPEASTWTMNDDKSLEVSLQKRSEGPLWSEVVLGDRRGEYLMNDEQKSQLQQRLSYLTSEDLNPNPEKDKPPCNAQELEDCDMFPEDSSTLMRFDGATLKPNNVVSLGSNQFLFSVHIDPSETPAFCLRHDVDALLWQPRPDKDNNIWEHISTFNALGYVQASKRDKKFATCA------PNFSYAALCECLRRIFIYRQPSPVDTVL 534
[Close]
BLAST of CS domain-containing protein vs. Ensembl Xenopus
Match: trim71 (tripartite motif containing 71, E3 ubiquitin protein ligase [Source:Xenbase;Acc:XB-GENE-6035039])

HSP 1 Score: 50.8322 bits (120), Expect = 5.277e-6
Identity = 35/153 (22.88%), Postives = 76/153 (49.67%), Query Frame = 2 
Query:   41 SLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYE-QLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEII 496
            SL  N +LL+  FE+Y+++L  L   N E+D  + +   ++       ++AFG +N L  + +  + V+++ +  +V       +T  + +P+ +F     ++  + +L  +++F S++     DG G  Y++   ++  S  G     WEI+
Sbjct:    7 SLRVNRQLLDPKFESYKLSLDPLPCYNVELDAAVAEVCLRDDQYTLDHMRAFGMYNYLHCNPWIPNSVFYVDQLERVMSFTVTLDT-AMGKPIEVFRFPRDLNTCDSRLCSSMYFASAQWVTLSDGTGTLYIIRIGNQSGSVSGK----WEIM 154
[Close]
BLAST of CS domain-containing protein vs. Ensembl Xenopus
Match: trim71 (tripartite motif containing 71, E3 ubiquitin protein ligase [Source:Xenbase;Acc:XB-GENE-6035039])

HSP 1 Score: 50.447 bits (119), Expect = 6.686e-6
Identity = 35/153 (22.88%), Postives = 76/153 (49.67%), Query Frame = 2 
Query:   41 SLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYE-QLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEII 496
            SL  N +LL+  FE+Y+++L  L   N E+D  + +   ++       ++AFG +N L  + +  + V+++ +  +V       +T  + +P+ +F     ++  + +L  +++F S++     DG G  Y++   ++  S  G     WEI+
Sbjct:    8 SLRVNRQLLDPKFESYKLSLDPLPCYNVELDAAVAEVCLRDDQYTLDHMRAFGMYNYLHCNPWIPNSVFYVDQLERVMSFTVTLDT-AMGKPIEVFRFPRDLNTCDSRLCSSMYFASAQWVTLSDGTGTLYIIRIGNQSGSVSGK----WEIM 155
[Close]
BLAST of CS domain-containing protein vs. Ensembl Xenopus
Match: trim71 (tripartite motif containing 71, E3 ubiquitin protein ligase [Source:Xenbase;Acc:XB-GENE-6035039])

HSP 1 Score: 50.447 bits (119), Expect = 6.751e-6
Identity = 35/153 (22.88%), Postives = 76/153 (49.67%), Query Frame = 2 
Query:   41 SLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYE-QLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEII 496
            SL  N +LL+  FE+Y+++L  L   N E+D  + +   ++       ++AFG +N L  + +  + V+++ +  +V       +T  + +P+ +F     ++  + +L  +++F S++     DG G  Y++   ++  S  G     WEI+
Sbjct:    7 SLRVNRQLLDPKFESYKLSLDPLPCYNVELDAAVAEVCLRDDQYTLDHMRAFGMYNYLHCNPWIPNSVFYVDQLERVMSFTVTLDT-AMGKPIEVFRFPRDLNTCDSRLCSSMYFASAQWVTLSDGTGTLYIIRIGNQSGSVSGK----WEIM 154
[Close]
BLAST of CS domain-containing protein vs. Ensembl Xenopus
Match: trim71 (tripartite motif containing 71, E3 ubiquitin protein ligase [Source:Xenbase;Acc:XB-GENE-6035039])

HSP 1 Score: 50.447 bits (119), Expect = 7.320e-6
Identity = 35/153 (22.88%), Postives = 76/153 (49.67%), Query Frame = 2 
Query:   41 SLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYE-QLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEII 496
            SL  N +LL+  FE+Y+++L  L   N E+D  + +   ++       ++AFG +N L  + +  + V+++ +  +V       +T  + +P+ +F     ++  + +L  +++F S++     DG G  Y++   ++  S  G     WEI+
Sbjct:    7 SLRVNRQLLDPKFESYKLSLDPLPCYNVELDAAVAEVCLRDDQYTLDHMRAFGMYNYLHCNPWIPNSVFYVDQLERVMSFTVTLDT-AMGKPIEVFRFPRDLNTCDSRLCSSMYFASAQWVTLSDGTGTLYIIRIGNQSGSVSGK----WEIM 154
[Close]
BLAST of CS domain-containing protein vs. Ensembl Mouse
Match: Nudcd1 (NudC domain containing 1 [Source:MGI Symbol;Acc:MGI:1914679])

HSP 1 Score: 106.686 bits (265), Expect = 1.020e-24
Identity = 130/552 (23.55%), Postives = 229/552 (41.49%), Query Frame = 2 
Query:   41 SLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYE-QLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEIITSTCIADN--DVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRISTNNITVNSK----NVELVWISYQFDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRYIPPDL----NIDTLCPDNVGQLAHWCNETEQTILFEFFLNIPIEKFKLEFQYPTDQCKELVIFIILENQTQALE--LYRNVSVCEFDDSKTNWSMEN----ELLLIK------FRKIVSGEVDDEIVSKKPKMVISGNEEVDDLDDSELGI------------------------GLFSGVDGSLMDDE--ISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNS--DDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQ 1543
            SL     LL+  FE Y+++L+ L     E+D  + +   ++       + AFG +N L  D +    VY+I   G++       +T  L +P  +F     ++ Y+ +L  ++ F S       DG G  YV+ T DR     G++ + WEI+ +  + +    ++S  L    EH+              +   LLRI    + +       ++E V ++ + + SK  ++    V +G S P       +   L IVS  SF+ I  D     N+D   P+ + +  ++  ++E  +     L     K  ++ Q+  D      I I L++  Q LE  LY ++     D   + W+++     E+ LIK      + ++V G+   E++ + P    +  E +  L   EL                                DG+ +     +++  N++LF + +   E    CLR +VD LLW    S  DD W H+ T NA GYV A+K D+KF  C+          +A + +  R ++I  Q
Sbjct:    7 SLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDAWYQDSVYYIDNLGRIMNLTVMLDT-ALGKPREVFRLPTDVTAYDNRLCASIHFTSPSWVTLSDGTGRLYVIGTGDR-----GNSPEKWEIMFNEELGNPFIIIHSISLLKAEEHS--------------VAILLLRIEKEELDLKGSGFYVSLEWVVVTKKKEDSKKYEITKHHVLRGKSVPHYAAIEPNGNGLMIVSYKSFKVISGDQDLEENMDEDRPEKIKEPLYYWQQSEDDLTVTVRLPESSTKEDIQIQFLPDN-----INIKLKD-IQVLEGKLYSSI-----DHEGSTWTIKENDSLEISLIKKNEGLMWPELVVGDKQGELL-RDPAQCAAIAERLMHLTSDELNPNPDKEKPACNAQELEECDIFFEESSSLCRFDGNTLQTTHVVNLGSNQYLFSVIVDPKEMPCFCLRHDVDALLWQPHCSKQDDMWEHIATFNALGYVQASKRDKKFFACA------PNYSYAALCECLRRVFIYRQ 520

HSP 2 Score: 26.9498 bits (58), Expect = 1.020e-24
Identity = 14/38 (36.84%), Postives = 21/38 (55.26%), Query Frame = 1 
Query: 1576 NRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVL 1689
            NR  G+ V  VA + + +LE +  I+G  A    +FVL
Sbjct:  530 NRKEGRHVGQVAKQQVASLETNDPILGFQATNERLFVL 567
[Close]
BLAST of CS domain-containing protein vs. Ensembl Mouse
Match: Nudcd1 (NudC domain containing 1 [Source:MGI Symbol;Acc:MGI:1914679])

HSP 1 Score: 102.834 bits (255), Expect = 1.477e-23
Identity = 133/554 (24.01%), Postives = 229/554 (41.34%), Query Frame = 2 
Query:   41 SLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYE-QLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEIITSTCIADN--DVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRISTNNITVNSK----NVELVWISYQFDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRYIPPDL----NIDTLCPD--NVGQLAHWCNETEQTILFEFFLNIPIEKFKLEFQYPTDQCKELVIFIILENQTQALE--LYRNVSVCEFDDSKTNWSMEN----ELLLIK------FRKIVSGEVDDEIVSKKPKMVISGNEEVDDLDDSELGI------------------------GLFSGVDGSLMDDE--ISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNS--DDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQ 1543
            SL     LL+  FE Y+++L+ L     E+D  + +   ++       + AFG +N L  D +    VY+I   G++       +T  L +P  +F     ++ Y+ +L  ++ F S       DG G  YV+ T DR     G++ + WEI+ +  + +    ++S  L    EH+              +   LLRI    + +       ++E V ++ + + SK  ++    V +G S P       +   L IVS  SF+ I  D     N+D   P+   V  L +W  ++E  +     L     K  ++ Q+  D      I I L++  Q LE  LY ++     D   + W+++     E+ LIK      + ++V G+   E++ + P    +  E +  L   EL                                DG+ +     +++  N++LF + +   E    CLR +VD LLW    S  DD W H+ T NA GYV A+K D+KF  C+          +A + +  R ++I  Q
Sbjct:    7 SLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDAWYQDSVYYIDNLGRIMNLTVMLDT-ALGKPREVFRLPTDVTAYDNRLCASIHFTSPSWVTLSDGTGRLYVIGTGDR-----GNSPEKWEIMFNEELGNPFIIIHSISLLKAEEHS--------------VAILLLRIEKEELDLKGSGFYVSLEWVVVTKKKEDSKKYEITKHHVLRGKSVPHYAAIEPNGNGLMIVSYKSFKVISGDQDLEENMDEDRPEKIKVEPLYYW-QQSEDDLTVTVRLPESSTKEDIQIQFLPDN-----INIKLKD-IQVLEGKLYSSI-----DHEGSTWTIKENDSLEISLIKKNEGLMWPELVVGDKQGELL-RDPAQCAAIAERLMHLTSDELNPNPDKEKPACNAQELEECDIFFEESSSLCRFDGNTLQTTHVVNLGSNQYLFSVIVDPKEMPCFCLRHDVDALLWQPHCSKQDDMWEHIATFNALGYVQASKRDKKFFACA------PNYSYAALCECLRRVFIYRQ 521

HSP 2 Score: 27.335 bits (59), Expect = 1.477e-23
Identity = 14/38 (36.84%), Postives = 21/38 (55.26%), Query Frame = 1 
Query: 1576 NRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVL 1689
            NR  G+ V  VA + + +LE +  I+G  A    +FVL
Sbjct:  531 NRKEGRHVGQVAKQQVASLETNDPILGFQATNERLFVL 568
[Close]
BLAST of CS domain-containing protein vs. UniProt/SwissProt
Match: sp|Q6PIP5|NUDC1_MOUSE (NudC domain-containing protein 1 OS=Mus musculus OX=10090 GN=Nudcd1 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 8.939e-23
Identity = 133/554 (24.01%), Postives = 229/554 (41.34%), Query Frame = 2 
Query:   41 SLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYE-QLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEIITSTCIADN--DVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRISTNNITVNSK----NVELVWISYQFDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRYIPPDL----NIDTLCPD--NVGQLAHWCNETEQTILFEFFLNIPIEKFKLEFQYPTDQCKELVIFIILENQTQALE--LYRNVSVCEFDDSKTNWSMEN----ELLLIK------FRKIVSGEVDDEIVSKKPKMVISGNEEVDDLDDSELGI------------------------GLFSGVDGSLMDDE--ISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNS--DDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQ 1543
            SL     LL+  FE Y+++L+ L     E+D  + +   ++       + AFG +N L  D +    VY+I   G++       +T  L +P  +F     ++ Y+ +L  ++ F S       DG G  YV+ T DR     G++ + WEI+ +  + +    ++S  L    EH+              +   LLRI    + +       ++E V ++ + + SK  ++    V +G S P       +   L IVS  SF+ I  D     N+D   P+   V  L +W  ++E  +     L     K  ++ Q+  D      I I L++  Q LE  LY ++     D   + W+++     E+ LIK      + ++V G+   E++ + P    +  E +  L   EL                                DG+ +     +++  N++LF + +   E    CLR +VD LLW    S  DD W H+ T NA GYV A+K D+KF  C+          +A + +  R ++I  Q
Sbjct:    7 SLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDAWYQDSVYYIDNLGRIMNLTVMLDT-ALGKPREVFRLPTDVTAYDNRLCASIHFTSPSWVTLSDGTGRLYVIGTGDR-----GNSPEKWEIMFNEELGNPFIIIHSISLLKAEEHS--------------VAILLLRIEKEELDLKGSGFYVSLEWVVVTKKKEDSKKYEITKHHVLRGKSVPHYAAIEPNGNGLMIVSYKSFKVISGDQDLEENMDEDRPEKIKVEPLYYW-QQSEDDLTVTVRLPESSTKEDIQIQFLPDN-----INIKLKD-IQVLEGKLYSSI-----DHEGSTWTIKENDSLEISLIKKNEGLMWPELVVGDKQGELL-RDPAQCAAIAERLMHLTSDELNPNPDKEKPACNAQELEECDIFFEESSSLCRFDGNTLQTTHVVNLGSNQYLFSVIVDPKEMPCFCLRHDVDALLWQPHCSKQDDMWEHIATFNALGYVQASKRDKKFFACA------PNYSYAALCECLRRVFIYRQ 521

HSP 2 Score: 27.335 bits (59), Expect = 8.939e-23
Identity = 14/38 (36.84%), Postives = 21/38 (55.26%), Query Frame = 1 
Query: 1576 NRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVL 1689
            NR  G+ V  VA + + +LE +  I+G  A    +FVL
Sbjct:  531 NRKEGRHVGQVAKQQVASLETNDPILGFQATNERLFVL 568
[Close]
BLAST of CS domain-containing protein vs. UniProt/SwissProt
Match: sp|Q96RS6|NUDC1_HUMAN (NudC domain-containing protein 1 OS=Homo sapiens OX=9606 GN=NUDCD1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.616e-22
Identity = 127/552 (23.01%), Postives = 227/552 (41.12%), Query Frame = 2 
Query:   41 SLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYE-QLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEIITSTCIADN--DVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRISTNNITVNSK----NVELVWISYQFDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRYIPP--DL--NIDTLCPDNVGQLAHWCNETEQTILFEFFLNIPIEKFKLEFQYPTDQCKELVIFIILENQTQALELYRNVSVCEFDDSKTNWSMEN----ELLLIK------FRKIVSGEVDDEIV--------------------------SKKPKMVISGNEEVDDLDDSELGIGLFSGVDGSLMDDE--ISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNS--DDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQ 1543
            SL     LL+  FE Y+++L+ L     E+D  + +   ++       + AFG +N L  D +    VY+I   G++       +T  L +P  +F     ++  + +L  ++ F SS      DG G  YV+ T +R    G    + WEI+ +  + D    ++S  L    EH+              +   LLRI    + +       ++E V IS +   +K  ++I + + +G S P       D   L IVS  S  ++    DL  N+D    + + +  ++  +TE  +     L     K  ++ Q+  D     +  ++ ++Q    +LY ++     D   + W ++     E+ LIK      + ++V G+   E++                           +KP       EE D   +    +  F   DG+ +     +++  N++LF + +   E    CLR +VD LLW   +S  DD W H+ T NA GYV A+K D+KF  C+          +A + +  R ++I  Q
Sbjct:    8 SLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSWYQDSVYYIDTLGRIMNLTVMLDT-ALGKPREVFRLPTDLTACDNRLCASIHFSSSTWVTLSDGTGRLYVIGTGER----GNSASEKWEIMFNEELGDPFIIIHSISLLNAEEHS--------------IATLLLRIEKEELDMKGSGFYVSLEWVTISKKNQDNKKYEIIKRDILRGKSVPHYAAIEPDGNGLMIVSYKSLTFVQAGQDLEENMDEDISEKIKEPLYYWQQTEDDLTVTIRLPEDSTKEDIQIQFLPDH----INIVLKDHQFLEGKLYSSI-----DHESSTWIIKESNSLEISLIKKNEGLTWPELVIGDKQGELIRDSAQCAAIAERLMHLTSEELNPNPDKEKPPCNAQELEECDIFFEESSSLCRF---DGNTLKTTHVVNLGSNQYLFSVIVDPKEMPCFCLRHDVDALLWQPHSSKQDDMWEHIATFNALGYVQASKRDKKFFACA------PNYSYAALCECLRRVFIYRQ 522

HSP 2 Score: 26.9498 bits (58), Expect = 1.616e-22
Identity = 14/38 (36.84%), Postives = 21/38 (55.26%), Query Frame = 1 
Query: 1576 NRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVL 1689
            NR  G+ V  VA + + +LE +  I+G  A    +FVL
Sbjct:  532 NRKEGRQVGQVAKQQVASLETNDPILGFQATNERLFVL 569
[Close]
BLAST of CS domain-containing protein vs. UniProt/SwissProt
Match: sp|Q503C8|NUDC1_DANRE (NudC domain-containing protein 1 OS=Danio rerio OX=7955 GN=nudcd1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.884e-21
Identity = 124/565 (21.95%), Postives = 226/565 (40.00%), Query Frame = 2 
Query:   41 SLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYEQLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEIITSTCIADNDVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRISTNNITVNSK--NVELVWISYQ------FDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRYI---------PPDLNIDTLCPDNVGQLAHWCNETEQTILFEFFLNIPIEKFKLEFQYPTDQCKELV--IFIILENQTQALELYRNVSVCEFDDSKTNWSM-ENELLLIKFRKIVSGEVDDEIV--SKKPKMVIS------------------------------GNEEVDDLDDSELGIGLFSGVDGSLM--DDEISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNSDDQ--WTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSM 1567
            SL  N +L++ +FE+YR++L  +   N E+D  + +   K+       V+AFG  N L ID +    VYF+   G+V       +T  L +P  +F  +   S+ E L  +L   S+  A   DG+G   +L T  R    G  +   WE + S  + D      ++   L H ++        +   +   LLR+  +         +V L WI+          + K   +  ++V KG S P         + + + S   F +          PP  +++    D +    ++  +TE+ +     L     K  + F+   D  +  V     +L+ Q  A            D   + W+M +++ L +  +K   G +  E+V   ++ + +++                                +E++D D S          DG+ +  ++ +S+  N++LF + +   E  + CLR +VD LLW      D   W H+ T NA GYV A+K D+KF  C+          +A + +  R ++I  Q   +D+ +
Sbjct:    7 SLNVNRELVDPNFESYRLSLDSIPTYNIELDAAVAEVKLKDSQYTLDHVRAFGMFNYLQIDPWYEDSVYFVDSKGRVLNLTVTLDT-ALGKPREMFHFESDSSSPEALCASLSLTSATWAALSDGNGKLTLLRTSKR----GESSHLKWEPMFSESLGD----PFIIVHSLAHVHS--------NVHTVEVLLLRVQKDPSDTKGSGFSVSLEWITVDNSAGQGESEEKKYAVRKRRVMKGKSVPHYAAVEPQGKGVIVASEKPFAFTEVDGLPLEEPPVQDMEVGNSDPI----YFWQQTEEDVTLCVRLPEGTTKDDIRFKLTVDCLRVRVGDYAPLLDGQLFA----------PVDPEASTWTMNDDKSLEVSLQKRSEGPLWSEVVLGDRRGEYLMNDEQKSQLQQRLSYLTSEDLNPNPEKDKPPCNAQELEDCDMSPEDSSTLMRFDGATLKPNNVVSLGSNQFLFSVHIDPSETPAFCLRHDVDALLWQPRPDQDNNIWEHISTFNALGYVQASKRDKKFATCA------PNFSYAALCECLRRVFIYRQPSPVDTVL 534
[Close]
BLAST of CS domain-containing protein vs. UniProt/SwissProt
Match: sp|Q7T0S2|NUDC1_XENLA (NudC domain-containing protein 1 OS=Xenopus laevis OX=8355 GN=nudcd1 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 2.034e-8
Identity = 38/148 (25.68%), Postives = 64/148 (43.24%), Query Frame = 2 
Query: 1106 KFRKIVSGEVDDEIVSKKPKMVISGNEEVDDLDDSELGIGLFSGVDGSLMDDEISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLN--SDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQ 1543
            K   + S +++    S+KP       EE D   +    +  F G         +++  N +LF      +      LR +VD LLW  ++   D+ W H+ T NA GYV A+K D+KF  C+          ++ + +  R ++I  Q
Sbjct:  385 KLMHLTSEDINPNPESEKPPCNAQELEECDIFLEDSTNLCRFDGTHLKATH-VVNLGSNPYLFTFVATPELMPCFALRHDVDALLWQPVSEQPDNLWEHIATFNALGYVQASKQDKKFFTCA------PNFSYSALCECVRRIFIYRQ 525

HSP 2 Score: 27.7202 bits (60), Expect = 2.034e-8
Identity = 15/45 (33.33%), Postives = 26/45 (57.78%), Query Frame = 1 
Query: 1576 NRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVLYRQSETV 1710
            NR  G+ V  VA + + +LE +  I+G  A+   +FVL  ++ +V
Sbjct:  535 NRKEGRRVGQVAKQQVASLETTDPILGFQASNERLFVLTTKTLSV 579
[Close]
BLAST of CS domain-containing protein vs. UniProt/SwissProt
Match: sp|Q28IB1|NUDC1_XENTR (NudC domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=nudcd1 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 4.663e-6
Identity = 28/95 (29.47%), Postives = 48/95 (50.53%), Query Frame = 2 
Query: 1265 ISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLN--SDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQ 1543
            +++  N +LF      +      LR +VD LLW  ++  +D+ W H+ T NA GYV A+K D+KF  C+          ++ + +  R ++I  Q
Sbjct:  437 VNLGSNPYLFTFVATPELMPCFALRHDVDALLWQPVSEQADNLWDHIATFNALGYVQASKQDKKFFTCA------PNFSYSALCECVRRIFIYRQ 525
[Close]
BLAST of CS domain-containing protein vs. TrEMBL
Match: L7MA31 (CS domain-containing protein OS=Rhipicephalus pulchellus OX=72859 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.300e-26
Identity = 140/584 (23.97%), Postives = 246/584 (42.12%), Query Frame = 2 
Query:   26 SKLKMSLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYEQLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEIITSTCIADNDVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRIST-----NNITVNSKNVELV----WISYQFDQSKNLDLIW----QKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRYIPPDLNIDTLCPDNVGQLAHWC--NETEQTILFEFFLNIPIEKFKLEFQYPTDQCKELV--------IFIILENQTQ-----ALELYRNVSVCEFDDSKTNWSMENELLLIKFRKIVSGEVDDEIV------------------------SKKPKMVISGNEEVDDLDDSELGIGLFSGV--DGSLMDDEISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLN--SDD-----QWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTVKIETLGK 1594
            +  ++ L+PN  LL+  FE+YR+ L+ L    Q     +     ++    +  V+  GF N L+ D ++++ ++FIS+   V    + +++  L EP V++  K+P  +       L F  +E     DG G  +VLN+  R P G     + W++  + C+  +   + LL      T+  S  P   S+ ++ C L  IS       ++++    V  V    W+++    +   D +W    Q+   G S P  V F     +L + S   F ++      D+ C   VG         + ++  L+ F      E+  + F+      K+ +        I I++E +T         + ++ S     D K    +      + +R++V G+   E V                        S KP       +E+DD DD+ +    F+ +  D      +I++S ++WLF +R   D   + CLR +VDGL+W   N  +D      +  H+ T NAFGYV A+K DRKF+  S PD       FA + +  R +Y+  Q   L SS  ++    G+
Sbjct:    4 TAARLDLVPNRNLLDAKFESYRLTLEPLPIIRQAFQGGVQKVHLEDDQYGYLHVQMAGFINALIQDPWDVNTLFFISEARHVMWAHFSQDSHLL-EPKVVW--KIPEPSGTSRACTLDFPHAEWCLISDGLGTIFVLNSPSR-PQG-----EPWQLCYTHCLEWSQPGTILL------TSAHSSFP---SSQQMECLLAYISRPQDVHGSVSIPETTVHFVCVLEWLTFTCMSNCEGD-VWSLRRQRRLVGASIPMYVAFDTHGNSLCLASEKDFSFV-----FDS-CKAEVGHEVEEAKGGKPQEPPLYSFIQTA--EEITVVFRLHEAATKKDIEVSLQVKGIEILIEGKTVLKGDFPHAVVKDGSTWIILDQKLEVHLVKAEHGVVWREVVVGDARGEEVFDPAFVEEIHARLAHLTSDTEASGSDKPSF---NYQELDDCDDT-MEYFTFTRLCGDSHRATHQINLSGHQWLFSVRSSADNMPALCLRHDVDGLVWQPRNVMADGDTDSFRVEHVATFNAFGYVQASKQDRKFVTAS-PD-----FSFAALCNAVRHVYLYRQPETLGSSQELRNRKTGR 550

HSP 2 Score: 40.4318 bits (93), Expect = 1.300e-26
Identity = 17/39 (43.59%), Postives = 29/39 (74.36%), Query Frame = 1 
Query: 1573 KNRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVL 1689
            +NR TG+ V ++A + +++LE+   I+G+VAN+  IFVL
Sbjct:  544 RNRKTGREVSSIAKQHVISLEQCDSILGMVANRRCIFVL 582
[Close]
BLAST of CS domain-containing protein vs. TrEMBL
Match: U3KP00 (NudC domain containing 1 OS=Oryctolagus cuniculus OX=9986 GN=NUDCD1 PE=4 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 6.881e-26
Identity = 131/517 (25.34%), Postives = 228/517 (44.10%), Query Frame = 2 
Query:   41 SLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYE-QLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEIITSTCIADN--DVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRISTNNITVNSK----NVELVWISYQFDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRYIPP----DLNIDTLCPDNVGQLAHWCNETEQTILFEFFLNIPIEKFKLEFQYPTDQCKELVIFIILENQTQALE--LYRNVSVCEFDDSKTNWSM-ENELLLIKFRKIVSGEVDDEIVSKKPKMVISGNEEVDDLDDSELGIGLFSGVDGSLMDDEISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNS--DDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQ 1543
            SL     LL+  FE Y+++L+ L     E+D  + +   ++       + AFG +N L  D +N   VY+I   G++       +T  L +P  +F     ++ Y+ +L  +L+F SS      DG G  YV+ T +R    G    + WEI+ +  + +    ++S  L+   EH+              +   LLRI   ++ +       ++E V IS +   +K  ++I +    G S P       D   L I S  SF+++      + N+D    + + +  ++  +TE  +     L     K  ++ Q+  +      I I+L +Q Q LE  LY  +     D   + W + EN  L I   K   G          P++VI G+++ + + DS     +   +     ++ +S+  N++LF + +   E    CLR +VD LLW   +S  DD W H+ T NA GYV A+K D+KF  C+ P+       +A + +  R ++I  Q
Sbjct:    8 SLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSWNQDSVYYIDNLGRIMNLTVMLDT-ALGKPREVFRLPTDLTAYDNRLCASLYFTSSTWVTLSDGTGRLYVIATGER----GNSASEKWEIMFNEELGNPFIIIHSISLQKMEEHS--------------IAILLLRIEKEDLDMKGSGFYVSLEWVTISNKNKDTKKYEIIKRDTLSGKSVPHYAAIEPDGNGLMIASYKSFQFVQTGQNFEENMDEDTSEKIKEPLYYWQQTEDDLTVTIRLPEDSRKEDIQVQFLPEH-----INIVLRDQ-QILEGKLYSLI-----DHESSTWIIKENNSLEISLIKKNEGMT-------WPELVI-GDKQGELIRDSAQCAAIAERLMHLTSEELVSLGSNQYLFSVVVDPKEMPCFCLRHDVDALLWQPHSSRQDDMWEHIATFNALGYVQASKRDKKFFACA-PN-----YSYAALCECLRRVFIYRQ 480

HSP 2 Score: 26.9498 bits (58), Expect = 6.881e-26
Identity = 14/38 (36.84%), Postives = 21/38 (55.26%), Query Frame = 1 
Query: 1576 NRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVL 1689
            NR  G+ V  VA + + +LE +  I+G  A    +FVL
Sbjct:  490 NRKEGRKVGQVAKQQVASLETNDPILGFQATNERLFVL 527
[Close]
BLAST of CS domain-containing protein vs. TrEMBL
Match: F6X3A0 (CS domain-containing protein OS=Ciona intestinalis OX=7719 PE=4 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 2.574e-25
Identity = 132/580 (22.76%), Postives = 232/580 (40.00%), Query Frame = 2 
Query:   35 KMSLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLP-ISNYEQLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEIITSTCIADNDVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRI-------STNNITVNSKNVELVWISY-QFDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRYIPP---DLNIDTLCPDNVGQLAHWCNETEQTILFEF---------FLNIPIEKFKLEFQYPTDQCKELVIFIILENQTQALELYRNVSVCEFDDSKTNWSMENELLLIKFRKIVSGE---------------VDDEIVSKKPK-----------------MVISGN--EEVDDLDDSELGIGLFSGVDGSLMDDEISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLW--TKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTVKI--ETLGKL 1597
            ++ L PN +LL+  FE+Y+++L  +      + C +      +    + K+K    HN L +D+++  +VYF+  DG + +  + +    +     +F      +     LPP L F S EI    DG    YVL T DR+       K+ ++           V ++     L   + KS   + +    L C  L+        S N  +  +    + W+S  +  + +   L+  ++++G S P   +   D   + + S+  F +IP    DLN D   P   G+LA+     ++   +E+         F+ +P +       Y   + K + I I      QA  +       E +   +NW + +  L +  +K + G                VD E V K  K                  + SG+  EE D   +S   +  F+      +     +S  +WLF   L    P +  LR +VD ++W  +   ++  W HL T NA GYV A+K + KF  C+ PD       +A + D +R +YI  Q   L S +  ++  E +G +
Sbjct:    5 QVELRPNRRLLDSKFESYKLSLAPIPSYKAPISCRVHLVRVGDDNFSYEKIKCLTLHNYLTLDQWHPDNVYFVDSDGCI-RRFHVQLEMHIEPSFAVFSFGFQRLGMKSNLPPTLHFASEEICIACDGMRSVYVLQTGDRNNRYSNTWKELYK----------HVEASSAPFILHSVHRKSTDESNIEY--LDCLFLKFVEKMQKPSENGNSDEATETVIEWVSLGKRPEEEKFQLLGVRMFQGKSFPCYASLLQDCSEMHLASDSPFSFIPSWCSDLNADLSLP---GELANEETVEDKDAPYEWKQTEEDVTVFIKLPPDVTTKSITYSLSKTK-VSIGIRETEDAQANIILEGDLYLEAEPESSNWIVSDGKLEVTIQKRIEGRTWMSVVDGDNRGKMIVDPEEVEKIHKKLEHLTSDTLESGEPQGQIYSGDQLEECDSYYNSSAALVCFNAT-AEAVTKSADISSTKWLFNAVLDPSRPAAFVLRHDVDAIVWQPSVTGNNTSWHHLATFNALGYVHASKNNLKFCSCA-PD-----TSYAALCDCQRRIYIYRQPTALSSPLRNRMSGEVVGNI 560
[Close]
BLAST of CS domain-containing protein vs. TrEMBL
Match: A0A1W2WAB8 (nudC domain-containing protein 1 OS=Ciona intestinalis OX=7719 GN=LOC100179639 PE=4 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.655e-25
Identity = 132/580 (22.76%), Postives = 232/580 (40.00%), Query Frame = 2 
Query:   35 KMSLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLP-ISNYEQLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEIITSTCIADNDVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRI-------STNNITVNSKNVELVWISY-QFDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRYIPP---DLNIDTLCPDNVGQLAHWCNETEQTILFEF---------FLNIPIEKFKLEFQYPTDQCKELVIFIILENQTQALELYRNVSVCEFDDSKTNWSMENELLLIKFRKIVSGE---------------VDDEIVSKKPK-----------------MVISGN--EEVDDLDDSELGIGLFSGVDGSLMDDEISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLW--TKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTVKI--ETLGKL 1597
            ++ L PN +LL+  FE+Y+++L  +      + C +      +    + K+K    HN L +D+++  +VYF+  DG + +  + +    +     +F      +     LPP L F S EI    DG    YVL T DR+       K+ ++           V ++     L   + KS   + +    L C  L+        S N  +  +    + W+S  +  + +   L+  ++++G S P   +   D   + + S+  F +IP    DLN D   P   G+LA+     ++   +E+         F+ +P +       Y   + K + I I      QA  +       E +   +NW + +  L +  +K + G                VD E V K  K                  + SG+  EE D   +S   +  F+      +     +S  +WLF   L    P +  LR +VD ++W  +   ++  W HL T NA GYV A+K + KF  C+ PD       +A + D +R +YI  Q   L S +  ++  E +G +
Sbjct:    9 QVELRPNRRLLDSKFESYKLSLAPIPSYKAPISCRVHLVRVGDDNFSYEKIKCLTLHNYLTLDQWHPDNVYFVDSDGCI-RRFHVQLEMHIEPSFAVFSFGFQRLGMKSNLPPTLHFASEEICIACDGMRSVYVLQTGDRNNRYSNTWKELYK----------HVEASSAPFILHSVHRKSTDESNIEY--LDCLFLKFVEKMQKPSENGNSDEATETVIEWVSLGKRPEEEKFQLLGVRMFQGKSFPCYASLLQDCSEMHLASDSPFSFIPSWCSDLNADLSLP---GELANEETVEDKDAPYEWKQTEEDVTVFIKLPPDVTTKSITYSLSKTK-VSIGIRETEDAQANIILEGDLYLEAEPESSNWIVSDGKLEVTIQKRIEGRTWMSVVDGDNRGKMIVDPEEVEKIHKKLEHLTSDTLESGEPQGQIYSGDQLEECDSYYNSSAALVCFNAT-AEAVTKSADISSTKWLFNAVLDPSRPAAFVLRHDVDAIVWQPSVTGNNTSWHHLATFNALGYVHASKNNLKFCSCA-PD-----TSYAALCDCQRRIYIYRQPTALSSPLRNRMSGEVVGNI 564
[Close]
BLAST of CS domain-containing protein vs. TrEMBL
Match: R7U695 (Uncharacterized protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_219149 PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.681e-24
Identity = 123/521 (23.61%), Postives = 215/521 (41.27%), Query Frame = 2 
Query:  137 ELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYEQLPPN-----LFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEIITSTCIADNDVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRISTNNITVNSKNVELVWISYQFDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRYIPPDLN---------IDTLCPDNVGQLAHWCNETEQTILFEFFLNIPIEKFKLEFQYPTDQCK------------ELVIFIILENQTQALELYRNVSVCEFDDSKTNWSMENELLLIKFRK---IVSGEVDDEIVSK-----------------KPKMVISGNEEVDDLDDSELGIGLFSGVDGSLMDDEISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNSD------DQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQ 1543
            E+   + +   L H  VKAFG HN+L++D +N + V+++    K+      EN+ + SE   +    +P S+Y++  P+     L F+S+E+A   DG G  Y++ T  R  SG       WE++ S  +   D    L    L               ++L   LL + T +    S    L W+S+  D      +   +  +G   P+ V   +D Q+L +    SF+++   +N          D     +    A+  ++T++ I+ +F L  P +K  + F    ++ K            EL   + +E  T  +    + +  E   SK + S +  L+++  ++   +VS E  ++I  +                 KP       E+ D        + +F+G   ++    +++  ++WLF          + CLR +VD +LW +L SD        W H  T NAFGYV A+K  RKF  CS          F  I D  + +Y+  Q
Sbjct:    6 EVLKLSERQYSLQH--VKAFGLHNHLILDPWNKNCVFYVDSQWKICLVSIDENS-RASEACPVL--AVPDSSYKKNVPDRLCMTLEFISAELAILADGAGTLYIIKTGVRT-SGSA-----WEVLHSEVVLGEDKPFLLRSASLSRKE-----------TELEIILLHVDTKDDGFISI---LEWLSFHSDDGTKWAVTQSRRLEGKLSPDYVNVVSDTQSLYLSGEQSFKFVYDSINPVEEEDDKMADVDISTSGAVPAYTWSQTDEDIVVQFTLKQPTDKNSVVFALSANEVKIGTDADGNLLQGELNAAVDVEASTWTI---TDKTKLELHLSKQDSSFQWPLVVVGDKRGEMVVSEEQAEKIHQQLAHLTSEQWNPDPEEDGKPAYNSQQLEDCDVFPGETSCMAVFNGTSHAVT-HLVNLGSHQWLFNGNACSSSLPAICLRHDVDAILW-QLTSDLPTPGVSPWNHAATFNAFGYVQASKRQRKFTVCS------PNYSFVAICDCVKHVYVYRQ 490

HSP 2 Score: 35.039 bits (79), Expect = 3.681e-24
Identity = 16/43 (37.21%), Postives = 28/43 (65.12%), Query Frame = 1 
Query: 1573 KNRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVLYRQS 1701
            +NR TG+ V  VA + +V L+ ++E++G  A   ++FVL  +S
Sbjct:  499 RNRKTGRQVAAVAKQQVVALDTAEEVVGCQATDEHLFVLTAKS 541
[Close]
BLAST of CS domain-containing protein vs. Ensembl Cavefish
Match: nudcd1 (NudC domain containing 1 [Source:NCBI gene;Acc:103036369])

HSP 1 Score: 95.9005 bits (237), Expect = 2.006e-20
Identity = 126/550 (22.91%), Postives = 225/550 (40.91%), Query Frame = 2 
Query:   41 SLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISN--YEQLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEIITSTCIADNDVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRISTNNITVNSKNVE--LVWISY--QFDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRY-----IP------PDLNIDTLCP--------DNVGQLAHWCNET-EQTILFEFF---LNIPIEKFK--LEFQYPTDQCKELVIFIILENQTQALELYRNV-----SVCEFDDSKTNWSMENELLLIKFRKIVSGEVDDEIVSKKPKMVISGN-EEVDDLDDSELGIGLFSGVDGSLMDDE--ISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKL--NSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSM 1567
            SL  N +LL+ SFE+YR++L  +     E+D  + +   K+       VKAFG +N L ID +    VYF+   G+V       +T  L +P  +F     +S+   E++  +L   S+  A   DG G   +L T  R    G  +   WE + S  + +  +        + H    S S  Q     +   LLRI  +            L WI+      + K  ++  +++ KG S P       + + L + S   F +     +P       D+ ++   P        ++V         T ++ I F+     L + I+ +   LE Q       E  ++II ++++  + L +       S     D +  + M NE    + ++ ++    +E+ +   K   + N +E++D D            DG+ +     +++  +++LF +     E  + CLR +VD LLW       D  W H  T NA GYV A+K D+KF  C+          +A + +  R ++I  Q   +D+ +
Sbjct:    7 SLKVNRELLDPSFESYRLSLDSIPCYKVELDAAVAEVKLKDSQYTLDHVKAFGMYNYLQIDPWYEESVYFVDCKGRVLNLTVTLDT-ALGKPREVFRMNPDLSSCEGERVCSSLSLTSATWAALSDGAGNLTLLRTSKR----GESSHLKWEAMFSESLGEPFI--------ILH----SLSNVQAGVHTIQLLLLRIQKDPADSKGSGFSTLLEWITLDNSTGEEKKYEVRKRRLMKGRSVPHYAALEPEGKGLMVASEKPFSFKEVDGVPLEEEGAEDMEVEPSDPIYFWQQTEEDVTVCVRLPEGTVKEDIRFKLTVDSLRVGIQDYAPLLEGQLCAPVDPEASVWIIKDDKSLEISLQKRSEGPLWSELVLGDRRGEYIM-NEEQAAQIQQRLAHLTAEELNANPEKDKPACNAQELEDCDGFPEDSSTLMRFDGATLKPTHVVNLGSHQYLFTVETNPSEMPAFCLRHDVDALLWQPRPEQPDSLWEHTATFNALGYVQASKRDKKFATCA------PNFSYAALAECLRRVFIYRQPSPVDTVL 532
[Close]
BLAST of CS domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002792.1 (pep scaffold:Pmarinus_7.0:GL488494:2227:2850:-1 gene:ENSPMAG00000002547.1 transcript:ENSPMAT00000002792.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 50.447 bits (119), Expect = 5.035e-8
Identity = 30/104 (28.85%), Postives = 52/104 (50.00%), Query Frame = 2 
Query:  185 VKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFE-AKLPISNYEQLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEI 493
            V+ +G  N+LV D ++   VY++ + G+V +     +T  L  PV +F  A+    +  ++  ++ F+S E A   DG G   VL+T  R      +T   WE+
Sbjct:   27 VRVYGMRNHLVADPWDATSVYYVDRAGRVQRVRVALDT-YLGTPVPVFRLAREVAGSPGRVSTSMHFLSEERAALCDGAGTLLVLHTGARAV----ETDAAWEV 125
[Close]
BLAST of CS domain-containing protein vs. Ensembl Nematostella
Match: EDO29627 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T338])

HSP 1 Score: 66.2402 bits (160), Expect = 4.783e-13
Identity = 37/113 (32.74%), Postives = 60/113 (53.10%), Query Frame = 2 
Query: 1262 EISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWT-KLNSDDQ---WTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTVKIETL 1588
            +  ++ ++WLF   L        CLR +VDGL+W  K +SD+Q   W H+ T NA G+V A+K  R+F  C+       G+++AV+ D  R +YI  +      +   ++ TL
Sbjct:    1 QTCLASHQWLFNTTLTPGSTPVFCLRHDVDGLVWQPKASSDNQETNWEHIGTFNALGFVQASKESRRFSLCA------PGMQYAVLCDNTRHVYIYYRNAAGQKTALQQVVTL 107
[Close]
BLAST of CS domain-containing protein vs. Ensembl Nematostella
Match: EDO36733 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SHY3])

HSP 1 Score: 66.2402 bits (160), Expect = 1.825e-11
Identity = 37/110 (33.64%), Postives = 59/110 (53.64%), Query Frame = 2 
Query: 1271 VSKNEWLFKLRLRKDEPFSACLRSNVDGLLW-TKLNSDDQ---WTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTVKIETL 1588
            ++ ++WLF   L        CLR +VDGL+W  K +SD+Q   W H+ T NA G+V A+K  R+F  C+       G+++AV+ D  R +YI  +      +   ++ TL
Sbjct:  437 LASHQWLFNTTLTPGSTPVFCLRHDVDGLVWQPKASSDNQETNWEHIGTFNALGFVQASKESRRFSLCA------PGMQYAVLCDNTRHVYIYYRNAAGQKTALQQVVTL 540

HSP 2 Score: 62.7734 bits (151), Expect = 2.116e-10
Identity = 67/268 (25.00%), Postives = 118/268 (44.03%), Query Frame = 2 
Query:   41 SLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNL----HHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYEQLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEIITSTCIADNDVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRISTNNITVNSKNVELVWISY----QFDQSKNLDLIWQ--KVWKGDSPPEMVTFSNDFQTLQIVSNHSFR 814
            SL PN+ LL++ FE Y+++   L  ++  +   +   + +  +     V+AFG  N+LV+D +        VY++  + +V +     +T +  E V  F+   P    E+L  ++   SS+ AC  DGHG  Y++NT  R  + G DT+  W++     +   D   T+L     H   + DS N      L C LL I   +  V++     V+++     Q + S +  L  +  K + G   P         + + + S   FR
Sbjct:    5 SLRPNKSLLDHRFEGYKLSGDQLEAKSINLVSGVNVASLREDLFSLQHVRAFGRPNHLVLDPWQSCEESERVYWVDTNYEVQQATVRGSTVEGIESV--FKIPTPEEQTERLNASIVLPSSKFACIGDGHGKLYLVNTEGR--TKGSDTR--WKL---AAVNQFDQPFTIL-----HAIQERDSNN------LSCLLLSIIEKDEEVSATKAHTVFLTLVSFSQVNTSGSASLTCESIKRFSGPCAPVYGAIEPGCKAILVASEKPFR 252
[Close]
BLAST of CS domain-containing protein vs. Ensembl Medaka
Match: nudcd1 (NudC domain containing 1 [Source:NCBI gene;Acc:101173318])

HSP 1 Score: 84.7297 bits (208), Expect = 1.929e-18
Identity = 133/553 (24.05%), Postives = 220/553 (39.78%), Query Frame = 2 
Query:   41 SLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFE-AKLPISNYEQLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEIITSTCIADNDVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRIS--TNNITVNSKNVELVWISYQ----FDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRYI-----PPDL-NIDTLCPDNVGQLAHWCNETEQTILFEFFLNIPIEKFKLEFQYPTDQCKELVIFI--ILENQTQALELYRNVSVCEFDDSKTNWSMENELLL-IKFRKIVSGEVDDEIV--SKKPKMVISGNEEV-----------------DDLDDSELGIGLFSGVDGSLMD-------DEIS--------VSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNSD--DQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQ 1543
            SL  N  LL+  FE+YR++L  +   N E+D  + +   K+       ++AFG +N L +D +    V F+   G+V       ++  L +P  ++  ++ P    + L  +L   SS  A   DG G  Y+L T  R   G G   K WE +    + D     T+L          S S  Q     +   LLRI   +   T +   V L WI+        Q K  ++  +++ +G S P         + L + S   F +      P +L     +  D +  +  W  +T + I     +   + K +++F+  +D     V     +LE Q     L+ +V     D   + W ++NE  L +  +K   G +  E+V   ++ + V+S  +                    D D            DG   D       DEIS        +  +++LF + +   E    C+R +VD L+W    S   D W H+ T NA GYV A+K D+KF  C+ PD       +A + +  R  +I  Q
Sbjct:    7 SLKVNRDLLDPKFESYRLSLDPIPTYNVELDAAVEEVKLKDTQYTLEHMRAFGMYNYLHLDPWYEDSVLFVDCKGRVLNLTVTLDS-ALGKPKEVYRISEEPGLCEDHLCSSLSLTSSTWAALSDGRGHLYLLRTGKR---GDGSHVK-WEPL---FVEDTGEPFTILH---------SVSHVQAGVHTVEVLLLRIQKDSQEATGSGYYVSLEWITVSSTAAHGQEKKYEVSKRRLLRGKSVPHYAAVEPQGKGLMVASEKPFVFTHVDGRPVELPEPQAMEADKIEPIYFW-QQTAEDITVCLRMPKGLTKEEVQFRLSSDDVSIGVRGFPPLLEGQ-----LFASV-----DPEASAWVIKNEKSLEVILQKRSEGPMWPELVMGDRRGEFVMSDEQAALIHERLTHLTSEDMNGNPDRDKPPCNSQELEDCDGYPEDSFTLAHFDEISLKPTQVVNLGGHQYLFTVDVDPSEMPCLCIRHDVDALVWQPRPSQPGDMWEHIATFNALGYVQASKRDKKFATCA-PD-----FSYASLCECFRRTFIYRQ 525

HSP 2 Score: 27.7202 bits (60), Expect = 1.929e-18
Identity = 13/38 (34.21%), Postives = 21/38 (55.26%), Query Frame = 1 
Query: 1576 NRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVL 1689
            NR  G+ V  VA + + +L+  K I+G  A    +F+L
Sbjct:  535 NRKQGRQVGQVAKQQVASLDSDKAILGFRATNERLFIL 572
[Close]
BLAST of CS domain-containing protein vs. Planmine SMEST
Match: SMESG000078259.1 (SMESG000078259.1)

HSP 1 Score: 1058.13 bits (2735), Expect = 0.000e+0
Identity = 510/520 (98.08%), Postives = 515/520 (99.04%), Query Frame = 2 
Query:   38 MSLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYEQLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWEIITSTCIADNDVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRISTNNITVNSKNVELVWISYQFDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRYIPPDLNIDTLCPDNVGQLAHWCNETEQTILFEFFLNIPIEKFKLEFQYPTDQCKELVIFIILENQTQALELYRNVSVCEFDDSKTNWSMENELLLIKFRKIVSGEVDDEIVSKKPKMVISGNEEVDDLDDSELGIGLFSGVDGSLMDDEISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTVKIETLGKL 1597
            MSLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYN+HHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYEQLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWE ITSTCIADNDVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRISTNNITVNSKNVELVWISYQFDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRYIPPDLNIDTLCPDNVG+LAHWCNETEQTILFEFFLNIPIEKFKLEFQYPTDQCKELVIFIILENQTQALELYRNVSVCEFDDSKTNWSMENELLLIKFRKIVSGEVDDEIVSKKPKMVISGNE+VDDLDDSELGIGLFSGVDGSLMDDEISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTVK    G++
Sbjct:    1 MSLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKVKAFGFHNNLVIDEYNIHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAKLPISNYEQLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYWETITSTCIADNDVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRISTNNITVNSKNVELVWISYQFDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTLQIVSNHSFRYIPPDLNIDTLCPDNVGRLAHWCNETEQTILFEFFLNIPIEKFKLEFQYPTDQCKELVIFIILENQTQALELYRNVSVCEFDDSKTNWSMENELLLIKFRKIVSGEVDDEIVSKKPKMVISGNEDVDDLDDSELGIGLFSGVDGSLMDDEISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTVKNRNTGQI 520

HSP 2 Score: 112.079 bits (279), Expect = 7.986e-26
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 
Query: 1573 KNRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVLYRQSETVTGITVINCS 1737
            KNRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVLYRQSETVTGITVINCS
Sbjct:  513 KNRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVLYRQSETVTGITVINCS 567
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BLAST of CS domain-containing protein vs. Planmine SMEST
Match: SMESG000021352.1 (SMESG000021352.1)

HSP 1 Score: 275.789 bits (704), Expect = 8.858e-101
Identity = 132/140 (94.29%), Postives = 135/140 (96.43%), Query Frame = 2 
Query: 1178 GNEEVDDLDDSELGIGLFSGVDGSLMDDEISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTVKIETLGKL 1597
            GNEEVDDLDDSELGIGLFSGVDGSLMDDEISVS+NEWLFKLRLRKDEP SACLRSNVDGLLWTKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTVK    G++
Sbjct:   21 GNEEVDDLDDSELGIGLFSGVDGSLMDDEISVSENEWLFKLRLRKDEPLSACLRSNVDGLLWTKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTVKNRNTGQI 160

HSP 2 Score: 112.079 bits (279), Expect = 8.858e-101
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 
Query: 1573 KNRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVLYRQSETVTGITVINCS 1737
            KNRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVLYRQSETVTGITVINCS
Sbjct:  153 KNRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVLYRQSETVTGITVINCS 207
[Close]
BLAST of CS domain-containing protein vs. Planmine SMEST
Match: SMESG000004064.1 (SMESG000004064.1)

HSP 1 Score: 269.24 bits (687), Expect = 1.594e-98
Identity = 128/137 (93.43%), Postives = 131/137 (95.62%), Query Frame = 2 
Query: 1187 EVDDLDDSELGIGLFSGVDGSLMDDEISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTVKIETLGKL 1597
            EVDDLDDSELGIGLFSGVDGSLMDDEISVS+NEWLFKLRLRKDEP SACLRSNVDGLLWTKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTV     G++
Sbjct:   53 EVDDLDDSELGIGLFSGVDGSLMDDEISVSENEWLFKLRLRKDEPLSACLRSNVDGLLWTKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTVTNRNTGQI 189

HSP 2 Score: 110.923 bits (276), Expect = 1.594e-98
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 1 
Query: 1576 NRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVLYRQSETVTGITVINCS 1737
            NRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVLYRQSETVTGITVINCS
Sbjct:  183 NRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVLYRQSETVTGITVINCS 236
[Close]
BLAST of CS domain-containing protein vs. Planmine SMEST
Match: SMESG000075881.1 (SMESG000075881.1)

HSP 1 Score: 226.483 bits (576), Expect = 3.521e-86
Identity = 106/115 (92.17%), Postives = 110/115 (95.65%), Query Frame = 2 
Query: 1253 MDDEISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTVKIETLGKL 1597
            MDDEISVS+NEWLFKLRLRKDEP SACLRSNVDGLLWTKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPD+DENGIKFAVITDWKRELYILMQRRLLDSSMTVK    G++
Sbjct:    1 MDDEISVSENEWLFKLRLRKDEPLSACLRSNVDGLLWTKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDRDENGIKFAVITDWKRELYILMQRRLLDSSMTVKNRNTGQI 115

HSP 2 Score: 112.849 bits (281), Expect = 3.521e-86
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 
Query: 1573 KNRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVLYRQSETVTGITVINCS 1737
            KNRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVLYRQSETVTGITVINCS
Sbjct:  108 KNRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVLYRQSETVTGITVINCS 162
[Close]
BLAST of CS domain-containing protein vs. Planmine SMEST
Match: SMESG000064589.1 (SMESG000064589.1)

HSP 1 Score: 219.55 bits (558), Expect = 5.064e-84
Identity = 104/114 (91.23%), Postives = 107/114 (93.86%), Query Frame = 2 
Query: 1256 DDEISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTVKIETLGKL 1597
            D  ISVS+NEWLFKLRLRKDEP SACLRSNVDGLLWTKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTVK    G++
Sbjct:  138 DQPISVSENEWLFKLRLRKDEPLSACLRSNVDGLLWTKLNSDDQWTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYILMQRRLLDSSMTVKNRNTGQI 251

HSP 2 Score: 112.079 bits (279), Expect = 5.064e-84
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 
Query: 1573 KNRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVLYRQSETVTGITVINCS 1737
            KNRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVLYRQSETVTGITVINCS
Sbjct:  244 KNRNTGQIVENVADEFLVTLEKSKEIMGVVANQSYIFVLYRQSETVTGITVINCS 298
The following BLAST results are available for this feature:
BLAST of CS domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 2
Match NameE-valueIdentityDescription
NUDCD13.688e-2323.01NudC domain containing 1 [Source:HGNC Symbol;Acc:H... [more]
NUDCD11.205e-1923.21NudC domain containing 1 [Source:HGNC Symbol;Acc:H... [more]
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BLAST of CS domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
C44E4.51.108e-828.40pep chromosome:WBcel235:I:4605655:4610202:1 gene:W... [more]
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BLAST of CS domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of CS domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
nudcd14.375e-2122.30NudC domain containing 1 [Source:NCBI gene;Acc:553... [more]
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BLAST of CS domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 4
Match NameE-valueIdentityDescription
trim715.277e-622.88tripartite motif containing 71, E3 ubiquitin prote... [more]
trim716.686e-622.88tripartite motif containing 71, E3 ubiquitin prote... [more]
trim716.751e-622.88tripartite motif containing 71, E3 ubiquitin prote... [more]
trim717.320e-622.88tripartite motif containing 71, E3 ubiquitin prote... [more]
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BLAST of CS domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Nudcd11.020e-2423.55NudC domain containing 1 [Source:MGI Symbol;Acc:MG... [more]
Nudcd11.477e-2324.01NudC domain containing 1 [Source:MGI Symbol;Acc:MG... [more]
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BLAST of CS domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q6PIP5|NUDC1_MOUSE8.939e-2324.01NudC domain-containing protein 1 OS=Mus musculus O... [more]
sp|Q96RS6|NUDC1_HUMAN1.616e-2223.01NudC domain-containing protein 1 OS=Homo sapiens O... [more]
sp|Q503C8|NUDC1_DANRE4.884e-2121.95NudC domain-containing protein 1 OS=Danio rerio OX... [more]
sp|Q7T0S2|NUDC1_XENLA2.034e-825.68NudC domain-containing protein 1 OS=Xenopus laevis... [more]
sp|Q28IB1|NUDC1_XENTR4.663e-629.47NudC domain-containing protein 1 OS=Xenopus tropic... [more]
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BLAST of CS domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
L7MA311.300e-2623.97CS domain-containing protein OS=Rhipicephalus pulc... [more]
U3KP006.881e-2625.34NudC domain containing 1 OS=Oryctolagus cuniculus ... [more]
F6X3A02.574e-2522.76CS domain-containing protein OS=Ciona intestinalis... [more]
A0A1W2WAB82.655e-2522.76nudC domain-containing protein 1 OS=Ciona intestin... [more]
R7U6953.681e-2423.61Uncharacterized protein OS=Capitella teleta OX=283... [more]
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BLAST of CS domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
nudcd12.006e-2022.91NudC domain containing 1 [Source:NCBI gene;Acc:103... [more]
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BLAST of CS domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ENSPMAT00000002792.15.035e-828.85pep scaffold:Pmarinus_7.0:GL488494:2227:2850:-1 ge... [more]
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BLAST of CS domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of CS domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO296274.783e-1332.74Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO367331.825e-1133.64Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of CS domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
nudcd11.929e-1824.05NudC domain containing 1 [Source:NCBI gene;Acc:101... [more]
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BLAST of CS domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000078259.17.986e-2698.08SMESG000078259.1[more]
SMESG000021352.18.858e-10194.29SMESG000021352.1[more]
SMESG000004064.11.594e-9893.43SMESG000004064.1[more]
SMESG000075881.13.521e-8692.17SMESG000075881.1[more]
SMESG000064589.15.064e-8491.23SMESG000064589.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30019763 ID=SMED30019763|Name=CS domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1769bp
CTGAAATTTTTTTGTGTTTTAATATTCAAAACTGAAAATGTCACTGATAC
CAAATGAGAAATTGTTAAATTATTCGTTTGAGACTTATCGTGTTAATCTC
CAGCATCTTAGTCGCAGAAATCAAGAAGTTGATTGCGAGTTATTTGATTG
GACTTTTAAAAATAAAGTACTGCACCATTCCAAAGTTAAAGCATTTGGAT
TTCATAATAACTTGGTAATAGATGAATATAATCTACATCATGTGTATTTC
ATTTCTAAAGACGGAAAGGTCTTCAAAACTATGTATTGTGAGAATACTGA
AAAATTAAGTGAACCAGTTGTAATTTTTGAGGCCAAATTACCTATATCTA
ATTATGAACAATTGCCCCCTAATTTGTTTTTCGTGTCTTCTGAAATTGCT
TGTTATGTAGATGGTCACGGATGTTTTTATGTTTTAAATACTTTCGATCG
TGATCCTTCTGGCGGAGGAGATACTAAAAAGTATTGGGAGATAATAACGT
CGACATGCATTGCTGATAACGATGTCAATTCTACTTTACTTGAATGCCGA
TTGGAACACACTAACAATAAATCTGATTCTCCGAATCAATTATCGGCATC
CAAATTGCATTGCTGTCTATTGCGAATATCGACAAATAATATTACTGTCA
ATTCAAAAAATGTTGAATTGGTTTGGATATCTTATCAATTTGATCAATCC
AAAAATTTAGATTTAATTTGGCAAAAAGTTTGGAAAGGAGATTCTCCTCC
AGAAATGGTGACTTTTTCCAACGATTTCCAAACATTACAAATTGTCAGTA
ATCACAGTTTTCGGTATATTCCACCTGATCTAAACATAGACACATTGTGC
CCGGACAATGTCGGCCAATTAGCTCATTGGTGCAATGAAACTGAACAAAC
GATTTTATTTGAATTTTTTCTAAACATTCCCATTGAAAAATTCAAATTAG
AATTCCAATATCCTACTGACCAATGCAAAGAACTAGTCATTTTCATCATT
CTGGAAAATCAAACTCAGGCATTGGAATTGTATAGGAACGTTTCTGTCTG
TGAATTCGACGACAGCAAAACCAATTGGAGCATGGAAAATGAATTATTGC
TGATCAAATTTAGAAAAATCGTATCGGGAGAGGTTGATGACGAAATTGTG
TCAAAAAAACCAAAAATGGTAATTAGTGGAAATGAAGAGGTGGATGATCT
CGATGACAGTGAGCTGGGAATTGGGCTATTTAGCGGTGTCGATGGCAGTC
TAATGGACGATGAGATTAGTGTAAGCAAAAATGAGTGGTTGTTTAAATTG
AGGTTGCGAAAAGATGAACCGTTTAGTGCTTGTTTGCGATCAAATGTTGA
CGGATTATTGTGGACTAAGCTGAATTCCGATGACCAATGGACGCATTTGC
ACACTCTCAACGCGTTTGGCTATGTTGCAGCAGCGAAAGTTGACCGGAAA
TTTATATGCTGCTCATTGCCAGATAAAGATGAAAACGGAATAAAATTTGC
AGTCATTACTGATTGGAAAAGGGAACTTTACATTCTGATGCAGCGCAGAT
TGCTCGATTCGTCAATGACTGTAAAAATAGAAACACTGGGCAAATTGTGG
AGAACGTTGCCGATGAATTCCTTGTGACTTTGGAAAAATCCAAAGAAATA
ATGGGAGTCGTTGCAAATCAAAGTTATATTTTTGTTCTCTATCGGCAATC
TGAAACCGTTACTGGGATCACTGTTATTAATTGTTCTTAAATAAAAATTT
TTGTTACGTCTCTAGATCG
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protein sequence of SMED30019763-orf-1

>SMED30019763-orf-1 ID=SMED30019763-orf-1|Name=SMED30019763-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=530bp
MSLIPNEKLLNYSFETYRVNLQHLSRRNQEVDCELFDWTFKNKVLHHSKV
KAFGFHNNLVIDEYNLHHVYFISKDGKVFKTMYCENTEKLSEPVVIFEAK
LPISNYEQLPPNLFFVSSEIACYVDGHGCFYVLNTFDRDPSGGGDTKKYW
EIITSTCIADNDVNSTLLECRLEHTNNKSDSPNQLSASKLHCCLLRISTN
NITVNSKNVELVWISYQFDQSKNLDLIWQKVWKGDSPPEMVTFSNDFQTL
QIVSNHSFRYIPPDLNIDTLCPDNVGQLAHWCNETEQTILFEFFLNIPIE
KFKLEFQYPTDQCKELVIFIILENQTQALELYRNVSVCEFDDSKTNWSME
NELLLIKFRKIVSGEVDDEIVSKKPKMVISGNEEVDDLDDSELGIGLFSG
VDGSLMDDEISVSKNEWLFKLRLRKDEPFSACLRSNVDGLLWTKLNSDDQ
WTHLHTLNAFGYVAAAKVDRKFICCSLPDKDENGIKFAVITDWKRELYIL
MQRRLLDSSMTVKIETLGKLWRTLPMNSL*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000019muscle progenitor cell
PLANA:0000429neoblast
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: biological process
TermDefinition
GO:0002376immune system process
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
GO:0005654nucleoplasm
GO:0005737cytoplasm
GO:0005829cytosol