Lipoma-preferred partner

Overview


Name	Lipoma-preferred partner
Smed ID	SMED30019594
Length (bp)	1398

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Lipoma-preferred partner (SMED30019594) t-SNE clustered cells

Violin plots show distribution of expression levels for Lipoma-preferred partner (SMED30019594) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Lipoma-preferred partner (SMED30019594) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Lipoma-preferred partner (SMED30019594) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30019594

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 2

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication	Specimen	Lifecycle	Evidence
cephalic ganglia	SMED30019594	SMESG000031084.1	dd_Smed_v4_12584_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30019594	SMESG000031084.1	dd_Smed_v4_12584_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Human
Match: TRIP6 (thyroid hormone receptor interactor 6 [Source:HGNC Symbol;Acc:HGNC:12311])

HSP 1 Score: 144.05 bits (362), Expect = 2.148e-37
Identity = 62/134 (46.27%), Postives = 84/134 (62.69%), Query Frame = 3

Query:  744 LNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            L+ VFH  CF C  C A L    F+  ++R  C  C   +LEKC  C+  I DRI+R +G  YHP CFTC VC+  LDG  FTVD   ++ C+EDFH+++APRC  CG  I P+ G +E  RI++ D++FH+ C
Sbjct:  296 LDRVFHVGCFVCSTCRAQLRGQHFYAVERRAYCEGCYVATLEKCATCSQPILDRILRAMGKAYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIEDFHRKFAPRCSVCGGAIMPEPGQEETVRIVALDRSFHIGC 429

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Human
Match: LPP (LIM domain containing preferred translocation partner in lipoma [Source:HGNC Symbol;Acc:HGNC:6679])

HSP 1 Score: 141.739 bits (356), Expect = 5.286e-36
Identity = 67/161 (41.61%), Postives = 91/161 (56.52%), Query Frame = 3

Query:  669 NECHRCRKPFELANGKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
              C RC        G++ VG+  G   ++ VFH  CF C  C   L    F+  +K+  C  C   +LE+C VC+  I +RI+R  G  YHP CFTC +C+  LDG  FTVD    + C+EDFHK++APRC  C EPI P  G +E  RI++ D+ FH+ C
Sbjct:  392 GRCARC--------GENVVGEGTGCTAMDQVFHVDCFTCIICNNKLRGQPFYAVEKKAYCEPCYINTLEQCNVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGLIHCIEDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVHC 544

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Human
Match: LPP (LIM domain containing preferred translocation partner in lipoma [Source:HGNC Symbol;Acc:HGNC:6679])

HSP 1 Score: 142.124 bits (357), Expect = 5.853e-36
Identity = 67/161 (41.61%), Postives = 91/161 (56.52%), Query Frame = 3

Query:  669 NECHRCRKPFELANGKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
              C RC        G++ VG+  G   ++ VFH  CF C  C   L    F+  +K+  C  C   +LE+C VC+  I +RI+R  G  YHP CFTC +C+  LDG  FTVD    + C+EDFHK++APRC  C EPI P  G +E  RI++ D+ FH+ C
Sbjct:  414 GRCARC--------GENVVGEGTGCTAMDQVFHVDCFTCIICNNKLRGQPFYAVEKKAYCEPCYINTLEQCNVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGLIHCIEDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVHC 566

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Human
Match: LPP (LIM domain containing preferred translocation partner in lipoma [Source:HGNC Symbol;Acc:HGNC:6679])

HSP 1 Score: 142.124 bits (357), Expect = 5.853e-36
Identity = 67/161 (41.61%), Postives = 91/161 (56.52%), Query Frame = 3

Query:  669 NECHRCRKPFELANGKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
              C RC        G++ VG+  G   ++ VFH  CF C  C   L    F+  +K+  C  C   +LE+C VC+  I +RI+R  G  YHP CFTC +C+  LDG  FTVD    + C+EDFHK++APRC  C EPI P  G +E  RI++ D+ FH+ C
Sbjct:  414 GRCARC--------GENVVGEGTGCTAMDQVFHVDCFTCIICNNKLRGQPFYAVEKKAYCEPCYINTLEQCNVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGLIHCIEDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVHC 566

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Human
Match: ZYX (zyxin [Source:HGNC Symbol;Acc:HGNC:13200])

HSP 1 Score: 132.494 bits (332), Expect = 1.226e-33
Identity = 65/157 (41.40%), Postives = 88/157 (56.05%), Query Frame = 3

Query:  675 CHRCRKPFELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            C RC +P  LA  + +V      L  +FH  CF C++C   L    F+  +    C  C  ++LEKC  C   I DR++R  G  YHP CFTC VC   L+G +F VD   R  C+ D+HK+YAPRC  C EPI P+ G  E  R+++ DK FH++C
Sbjct:  227 CGRCHQP--LARAQPAVRA----LGQLFHIACFTCHQCAQQLQGQQFYSLEGAPYCEGCYTDTLEKCNTCGEPITDRMLRATGKAYHPHCFTCVVCARPLEGTSFIVDQANRPHCVPDYHKQYAPRCSVCSEPIMPEPGRDETVRVVALDKNFHMKC 377

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Celegans
Match: zyx-1 (Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4])

HSP 1 Score: 126.331 bits (316), Expect = 2.279e-32
Identity = 60/147 (40.82%), Postives = 84/147 (57.14%), Query Frame = 3

Query:  711 GKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            GK   G   G   +N +FH  CF C +C   L   SF+    +  C  C   SLEKCT CN  I+D+++R  G  YH  CF C  C   LDG  FT+D    + C+  FH ++APRC  C +PI PQ+G +E+ R+++ DK+FH++C
Sbjct:  149 GKEITGDQPGCNAMNQIFHVDCFKCGQCSKTLAGASFYNIDDKPTCEGCYQNSLEKCTACNRAISDKLLRACGGVYHVNCFVCFSCKKSLDGIPFTLDKDNNVHCVPCFHDKFAPRCALCSKPIVPQDGEKESVRVVAMDKSFHVDC 295

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Celegans
Match: zyx-1 (Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4])

HSP 1 Score: 130.183 bits (326), Expect = 2.539e-32
Identity = 60/147 (40.82%), Postives = 84/147 (57.14%), Query Frame = 3

Query:  711 GKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            GK   G   G   +N +FH  CF C +C   L   SF+    +  C  C   SLEKCT CN  I+D+++R  G  YH  CF C  C   LDG  FT+D    + C+  FH ++APRC  C +PI PQ+G +E+ R+++ DK+FH++C
Sbjct:  415 GKEITGDQPGCNAMNQIFHVDCFKCGQCSKTLAGASFYNIDDKPTCEGCYQNSLEKCTACNRAISDKLLRACGGVYHVNCFVCFSCKKSLDGIPFTLDKDNNVHCVPCFHDKFAPRCALCSKPIVPQDGEKESVRVVAMDKSFHVDC 561

[Close]

Query:  711 GKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            GK   G   G   +N +FH  CF C +C   L   SF+    +  C  C   SLEKCT CN  I+D+++R  G  YH  CF C  C   LDG  FT+D    + C+  FH ++APRC  C +PI PQ+G +E+ R+++ DK+FH++C
Sbjct:  415 GKEITGDQPGCNAMNQIFHVDCFKCGQCSKTLAGASFYNIDDKPTCEGCYQNSLEKCTACNRAISDKLLRACGGVYHVNCFVCFSCKKSLDGIPFTLDKDNNVHCVPCFHDKFAPRCALCSKPIVPQDGEKESVRVVAMDKSFHVDC 561

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Celegans
Match: zyx-1 (Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4])

HSP 1 Score: 123.635 bits (309), Expect = 2.846e-32
Identity = 60/150 (40.00%), Postives = 85/150 (56.67%), Query Frame = 3

Query:  702 LANGKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            +  GK   G   G   +N +FH  CF C +C   L   SF+    +  C  C   SLEKCT CN  I+D+++R  G  YH  CF C  C   LDG  FT+D    + C+  FH ++APRC  C +PI PQ+G +E+ R+++ DK+FH++C
Sbjct:   54 VGCGKEITGDQPGCNAMNQIFHVDCFKCGQCSKTLAGASFYNIDDKPTCEGCYQNSLEKCTACNRAISDKLLRACGGVYHVNCFVCFSCKKSLDGIPFTLDKDNNVHCVPCFHDKFAPRCALCSKPIVPQDGEKESVRVVAMDKSFHVDC 203

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Celegans
Match: zyx-1 (Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4])

HSP 1 Score: 129.413 bits (324), Expect = 5.206e-32
Identity = 60/147 (40.82%), Postives = 84/147 (57.14%), Query Frame = 3

Query:  711 GKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            GK   G   G   +N +FH  CF C +C   L   SF+    +  C  C   SLEKCT CN  I+D+++R  G  YH  CF C  C   LDG  FT+D    + C+  FH ++APRC  C +PI PQ+G +E+ R+++ DK+FH++C
Sbjct:  415 GKEITGDQPGCNAMNQIFHVDCFKCGQCSKTLAGASFYNIDDKPTCEGCYQNSLEKCTACNRAISDKLLRACGGVYHVNCFVCFSCKKSLDGIPFTLDKDNNVHCVPCFHDKFAPRCALCSKPIVPQDGEKESVRVVAMDKSFHVDC 561

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Fly
Match: Zyx (gene:FBgn0011642 transcript:FBtr0309882)

HSP 1 Score: 137.502 bits (345), Expect = 3.813e-35
Identity = 61/143 (42.66%), Postives = 89/143 (62.24%), Query Frame = 3

Query:  723 VGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            +G+ +G   ++ ++H  CF C  C+ NL    F+    +  C     ++LEKC+VC   I +RI+R  G PYHP+CFTC VC   LDG  FTVD   + +C+ DFHK++APRC  C +PI P  G +E  R+++ D++FHLEC
Sbjct:  307 LGESSGCTAMDQIYHIFCFTCTDCQINLQGKPFYALDGKPYCEYDYLQTLEKCSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQNYCITDFHKKFAPRCCVCKQPIMPDPGQEETIRVVALDRSFHLEC 449

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Fly
Match: Zyx (gene:FBgn0011642 transcript:FBtr0089214)

HSP 1 Score: 137.502 bits (345), Expect = 4.429e-35
Identity = 61/143 (42.66%), Postives = 89/143 (62.24%), Query Frame = 3

Query:  723 VGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            +G+ +G   ++ ++H  CF C  C+ NL    F+    +  C     ++LEKC+VC   I +RI+R  G PYHP+CFTC VC   LDG  FTVD   + +C+ DFHK++APRC  C +PI P  G +E  R+++ D++FHLEC
Sbjct:  334 LGESSGCTAMDQIYHIFCFTCTDCQINLQGKPFYALDGKPYCEYDYLQTLEKCSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQNYCITDFHKKFAPRCCVCKQPIMPDPGQEETIRVVALDRSFHLEC 476

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Fly
Match: Zyx (gene:FBgn0011642 transcript:FBtr0089211)

HSP 1 Score: 138.272 bits (347), Expect = 4.658e-35
Identity = 61/143 (42.66%), Postives = 89/143 (62.24%), Query Frame = 3

Query:  723 VGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            +G+ +G   ++ ++H  CF C  C+ NL    F+    +  C     ++LEKC+VC   I +RI+R  G PYHP+CFTC VC   LDG  FTVD   + +C+ DFHK++APRC  C +PI P  G +E  R+++ D++FHLEC
Sbjct:  396 LGESSGCTAMDQIYHIFCFTCTDCQINLQGKPFYALDGKPYCEYDYLQTLEKCSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQNYCITDFHKKFAPRCCVCKQPIMPDPGQEETIRVVALDRSFHLEC 538

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Fly
Match: Zyx (gene:FBgn0011642 transcript:FBtr0345298)

HSP 1 Score: 138.272 bits (347), Expect = 4.658e-35
Identity = 61/143 (42.66%), Postives = 89/143 (62.24%), Query Frame = 3

Query:  723 VGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            +G+ +G   ++ ++H  CF C  C+ NL    F+    +  C     ++LEKC+VC   I +RI+R  G PYHP+CFTC VC   LDG  FTVD   + +C+ DFHK++APRC  C +PI P  G +E  R+++ D++FHLEC
Sbjct:  396 LGESSGCTAMDQIYHIFCFTCTDCQINLQGKPFYALDGKPYCEYDYLQTLEKCSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQNYCITDFHKKFAPRCCVCKQPIMPDPGQEETIRVVALDRSFHLEC 538

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Fly
Match: Zyx (gene:FBgn0011642 transcript:FBtr0089210)

HSP 1 Score: 137.887 bits (346), Expect = 4.759e-35
Identity = 61/143 (42.66%), Postives = 89/143 (62.24%), Query Frame = 3

Query:  723 VGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            +G+ +G   ++ ++H  CF C  C+ NL    F+    +  C     ++LEKC+VC   I +RI+R  G PYHP+CFTC VC   LDG  FTVD   + +C+ DFHK++APRC  C +PI P  G +E  R+++ D++FHLEC
Sbjct:  375 LGESSGCTAMDQIYHIFCFTCTDCQINLQGKPFYALDGKPYCEYDYLQTLEKCSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQNYCITDFHKKFAPRCCVCKQPIMPDPGQEETIRVVALDRSFHLEC 517

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Zebrafish
Match: trip6 (thyroid hormone receptor interactor 6 [Source:ZFIN;Acc:ZDB-GENE-140106-91])

HSP 1 Score: 152.91 bits (385), Expect = 3.742e-40
Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 3

Query:  744 LNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            +  VFH  CF C  C A L    F+   ++  C  C   +LE+C+ C+  I DRI+R +G  YHP+CFTC VC CCLDG  FTVD   ++ C++DFH+++APRC  CG+PI P+ G +E  RI++ D++FH+ C
Sbjct:  390 MEQVFHVECFTCITCHARLRGQPFYALDRKSYCENCYISTLERCSKCSEPILDRILRAMGKAYHPRCFTCVVCGCCLDGVPFTVDATSQIHCIDDFHRKFAPRCSVCGQPIMPEPGQEETVRIVALDRSFHVNC 523

[Close]

Query:  744 LNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            +  VFH  CF C  C A L    F+   ++  C  C   +LE+C+ C+  I DRI+R +G  YHP+CFTC VC CCLDG  FTVD   ++ C++DFH+++APRC  CG+PI P+ G +E  RI++ D++FH+ C
Sbjct:  390 MEQVFHVECFTCITCHARLRGQPFYALDRKSYCENCYISTLERCSKCSEPILDRILRAMGKAYHPRCFTCVVCGCCLDGVPFTVDATSQIHCIDDFHRKFAPRCSVCGQPIMPEPGQEETVRIVALDRSFHVNC 523

[Close]

Query:  744 LNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            +  VFH  CF C  C A L    F+   ++  C  C   +LE+C+ C+  I DRI+R +G  YHP+CFTC VC CCLDG  FTVD   ++ C++DFH+++APRC  CG+PI P+ G +E  RI++ D++FH+ C
Sbjct:  390 MEQVFHVECFTCITCHARLRGQPFYALDRKSYCENCYISTLERCSKCSEPILDRILRAMGKAYHPRCFTCVVCGCCLDGVPFTVDATSQIHCIDDFHRKFAPRCSVCGQPIMPEPGQEETVRIVALDRSFHVNC 523

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Zebrafish
Match: trip6 (thyroid hormone receptor interactor 6 [Source:ZFIN;Acc:ZDB-GENE-140106-91])

HSP 1 Score: 152.91 bits (385), Expect = 3.823e-40
Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 3

Query:  744 LNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            +  VFH  CF C  C A L    F+   ++  C  C   +LE+C+ C+  I DRI+R +G  YHP+CFTC VC CCLDG  FTVD   ++ C++DFH+++APRC  CG+PI P+ G +E  RI++ D++FH+ C
Sbjct:  391 MEQVFHVECFTCITCHARLRGQPFYALDRKSYCENCYISTLERCSKCSEPILDRILRAMGKAYHPRCFTCVVCGCCLDGVPFTVDATSQIHCIDDFHRKFAPRCSVCGQPIMPEPGQEETVRIVALDRSFHVNC 524

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Zebrafish
Match: CR352261.1 (thyroid hormone receptor interactor 6 [Source:NCBI gene;Acc:792697])

HSP 1 Score: 152.91 bits (385), Expect = 3.899e-40
Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 3

Query:  744 LNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            +  VFH  CF C  C A L    F+   ++  C  C   +LE+C+ C+  I DRI+R +G  YHP+CFTC VC CCLDG  FTVD   ++ C++DFH+++APRC  CG+PI P+ G +E  RI++ D++FH+ C
Sbjct:  391 MEQVFHVECFTCITCHARLRGQPFYALDRKSYCENCYISTLERCSKCSEPILDRILRAMGKAYHPRCFTCVVCGCCLDGVPFTVDATSQIHCIDDFHRKFAPRCSVCGQPIMPEPGQEETVRIVALDRSFHVNC 524

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Xenopus
Match: nudt17 (nudix hydrolase 17 [Source:Xenbase;Acc:XB-GENE-979158])

HSP 1 Score: 150.599 bits (379), Expect = 1.844e-40
Identity = 85/243 (34.98%), Postives = 123/243 (50.62%), Query Frame = 3

Query:  423 NLSQVRKNSEAEVDALTNILIKSIANKTENKDSNPRSYTSSTYLPNQPYSSKRVSNTSSQPAVXXXXXXXXXXXXXXXXXXXNECHRCRKPFELANGKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
             + + R + +AE+D+LT+IL    A+   +    PR+       P  PY ++  S          +        +  S      C RC        G++ VG+  G   ++ VFH  CF C  C + L    F+  +K+  C  C   +LEKC+VC   I +RI+R  G  YHP CFTC VC   LDG  FTVD   ++ C+EDFHK++APRC  C EPI P  G +E  RI++ D+ FH++C
Sbjct:  112 TIEERRSSLDAEIDSLTSIL----ADLENSSPYKPRT-------PQGPYLAQASSLRPEDELERLTKKMLYDMENPPSEEYFGRCSRC--------GENVVGEGTGCTAMDQVFHVECFTCMTCNSKLRGQPFYAVEKKAFCEPCYIRTLEKCSVCAKPIMERILRATGKAYHPHCFTCVVCFRSLDGIPFTVDASGQIHCIEDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVQC 335

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Xenopus
Match: nudt17 (nudix hydrolase 17 [Source:Xenbase;Acc:XB-GENE-979158])

HSP 1 Score: 150.599 bits (379), Expect = 6.736e-39
Identity = 69/161 (42.86%), Postives = 93/161 (57.76%), Query Frame = 3

Query:  669 NECHRCRKPFELANGKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
              C RC        G++ VG+  G   ++ VFH  CF C  C + L    F+  +K+  C  C   +LEKC+VC   I +RI+R  G  YHP CFTC VC   LDG  FTVD   ++ C+EDFHK++APRC  C EPI P  G +E  RI++ D+ FH++C
Sbjct:  416 GRCSRC--------GENVVGEGTGCTAMDQVFHVECFTCMTCNSKLRGQPFYAVEKKAFCEPCYIRTLEKCSVCAKPIMERILRATGKAYHPHCFTCVVCFRSLDGIPFTVDASGQIHCIEDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVQC 568

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Xenopus
Match: nudt17 (nudix hydrolase 17 [Source:Xenbase;Acc:XB-GENE-979158])

HSP 1 Score: 150.214 bits (378), Expect = 7.428e-39
Identity = 69/161 (42.86%), Postives = 93/161 (57.76%), Query Frame = 3

Query:  669 NECHRCRKPFELANGKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
              C RC        G++ VG+  G   ++ VFH  CF C  C + L    F+  +K+  C  C   +LEKC+VC   I +RI+R  G  YHP CFTC VC   LDG  FTVD   ++ C+EDFHK++APRC  C EPI P  G +E  RI++ D+ FH++C
Sbjct:  416 GRCSRC--------GENVVGEGTGCTAMDQVFHVECFTCMTCNSKLRGQPFYAVEKKAFCEPCYIRTLEKCSVCAKPIMERILRATGKAYHPHCFTCVVCFRSLDGIPFTVDASGQIHCIEDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVQC 568

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Xenopus
Match: gnpda1 (glucosamine-6-phosphate deaminase 1 [Source:Xenbase;Acc:XB-GENE-966376])

HSP 1 Score: 129.798 bits (325), Expect = 6.754e-32
Identity = 60/162 (37.04%), Postives = 88/162 (54.32%), Query Frame = 3

Query:  675 CHRCRKPFELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSR-----CVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            C +C K    AN      Q    +  ++H  CF C  C   L   +F++   ++ C         H+S ++C VC   I D I++ LG  +HP CF C VCN CLDG  FTVD+  +++C++D+HK  AP+C AC  PI P  G  E  R++S DK +H++C
Sbjct:  393 CVKCSKGVYGAN------QACQAMGNLYHNGCFICSACSRKLRGKAFYFVNGKVYCEEDFLYSGFHQSADRCFVCGHWIMDMILQALGKSFHPGCFRCAVCNECLDGVPFTVDMENKIYCVKDYHKILAPKCAACSLPILPSEGTDETIRVVSMDKDYHIDC 548

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Xenopus
Match: arf4 (ADP ribosylation factor 4 [Source:Xenbase;Acc:XB-GENE-484079])

HSP 1 Score: 128.257 bits (321), Expect = 4.467e-31
Identity = 55/155 (35.48%), Postives = 84/155 (54.19%), Query Frame = 3

Query:  696 FELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSR-----CVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
             +   G     Q    +  ++H  CF C  C   L   +F+    ++ C          ++ +KC VC  +I + I++ LG  YHP CF C VCN CLDG  FTVDV   ++C++D+H  +AP+C +C +PI P  G +E  R++S DK +H+EC
Sbjct:  490 IKCGKGVYGASQACQAMGNLYHTNCFTCCSCGRRLRGKAFYNVNGKVYCEEDFLYSGFQQTADKCFVCGHLIMEMILQALGKSYHPGCFRCVVCNECLDGVPFTVDVENNIYCVKDYHTVFAPKCASCNQPILPAQGSEETIRVVSMDKDYHVEC 644

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Mouse
Match: Trip6 (thyroid hormone receptor interactor 6 [Source:MGI Symbol;Acc:MGI:1343458])

HSP 1 Score: 144.05 bits (362), Expect = 1.677e-37
Identity = 66/147 (44.90%), Postives = 90/147 (61.22%), Query Frame = 3

Query:  711 GKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            G+  VG   G   L+ VFH  CF C  C A L    F+  ++R  C  C   +LEKC+ C+  I DRI+R +G  YHP CFTC VC+  LDG  FTVD   ++ C+EDFH+++APRC  CG  I P+ G +E  RI++ D++FH+ C
Sbjct:  287 GEDVVGDGAGVVALDRVFHIGCFVCSTCRAQLRGQHFYAVERRAYCESCYVATLEKCSTCSEPILDRILRAMGKAYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIEDFHRKFAPRCSVCGGAIMPEPGQEETVRIVALDRSFHIGC 433

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Mouse
Match: Lpp (LIM domain containing preferred translocation partner in lipoma [Source:MGI Symbol;Acc:MGI:2441849])

HSP 1 Score: 142.51 bits (358), Expect = 7.950e-37
Identity = 67/161 (41.61%), Postives = 93/161 (57.76%), Query Frame = 3

Query:  669 NECHRCRKPFELANGKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
              C RC        G++ VG+  G   ++ VFH  CF C  C+  L    F+  +K+  C  C   +LE+C+VC+  I +RI+R  G  YHP CFTC +C+  LDG  FTVD    + C+EDFHK++APRC  C EPI P  G +E  RI++ D+ FH+ C
Sbjct:  290 GRCARC--------GENVVGEGTGCTAMDQVFHVDCFTCIVCDVKLRGQPFYAVEKKAYCEPCYINTLEQCSVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDACGLIHCIEDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVHC 442

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Mouse
Match: Lpp (LIM domain containing preferred translocation partner in lipoma [Source:MGI Symbol;Acc:MGI:2441849])

HSP 1 Score: 143.665 bits (361), Expect = 1.056e-36
Identity = 67/161 (41.61%), Postives = 93/161 (57.76%), Query Frame = 3

Query:  669 NECHRCRKPFELANGKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
              C RC        G++ VG+  G   ++ VFH  CF C  C+  L    F+  +K+  C  C   +LE+C+VC+  I +RI+R  G  YHP CFTC +C+  LDG  FTVD    + C+EDFHK++APRC  C EPI P  G +E  RI++ D+ FH+ C
Sbjct:  415 GRCARC--------GENVVGEGTGCTAMDQVFHVDCFTCIVCDVKLRGQPFYAVEKKAYCEPCYINTLEQCSVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDACGLIHCIEDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVHC 567

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Mouse
Match: Lpp (LIM domain containing preferred translocation partner in lipoma [Source:MGI Symbol;Acc:MGI:2441849])

HSP 1 Score: 143.665 bits (361), Expect = 1.056e-36
Identity = 67/161 (41.61%), Postives = 93/161 (57.76%), Query Frame = 3

Query:  669 NECHRCRKPFELANGKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
              C RC        G++ VG+  G   ++ VFH  CF C  C+  L    F+  +K+  C  C   +LE+C+VC+  I +RI+R  G  YHP CFTC +C+  LDG  FTVD    + C+EDFHK++APRC  C EPI P  G +E  RI++ D+ FH+ C
Sbjct:  415 GRCARC--------GENVVGEGTGCTAMDQVFHVDCFTCIVCDVKLRGQPFYAVEKKAYCEPCYINTLEQCSVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDACGLIHCIEDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVHC 567

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Mouse
Match: Zyx (zyxin [Source:MGI Symbol;Acc:MGI:103072])

HSP 1 Score: 138.658 bits (348), Expect = 2.459e-35
Identity = 65/157 (41.40%), Postives = 92/157 (58.60%), Query Frame = 3

Query:  675 CHRCRKPFELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            C +C +P  LA  + +V      L  +FH TCF C++C+  L    F+  +    C  C  ++LEKC  C   I DR++R  G  YHP+CFTC VC C L+G +F VD   +  C+ D+HK+YAPRC  C EPI P+ G  E  R+++ DK FH++C
Sbjct:  345 CGKCNQP--LARAQPAVRA----LGQLFHITCFTCHQCQQQLQGQQFYSLEGAPYCEGCYTDTLEKCNTCGQPITDRMLRATGKAYHPQCFTCVVCACPLEGTSFIVDQANQPHCVPDYHKQYAPRCSVCSEPIMPEPGRDETVRVVALDKNFHMKC 495

[Close]

BLAST of Lipoma-preferred partner vs. UniProt/SwissProt
Match: sp|Q3SX26|TRIP6_BOVIN (Thyroid receptor-interacting protein 6 OS=Bos taurus OX=9913 GN=TRIP6 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.943e-37
Identity = 66/147 (44.90%), Postives = 90/147 (61.22%), Query Frame = 3

Query:  711 GKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            G+  VG   G   L+ VFH  CF C  C A L    F+  ++R  C  C   +LEKC+ C+  I DRI+R +G  YHP CFTC VC+  LDG  FTVD   ++ C+EDFH+++APRC  CG  I P+ G +E  RI++ D++FH+ C
Sbjct:  288 GEDVVGDGAGVVALDRVFHVGCFVCSTCRAQLRGQHFYAVERRAYCESCYVATLEKCSTCSQPILDRILRAMGKAYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIEDFHRKFAPRCSVCGGAIMPEPGQEETVRIVALDRSFHIGC 434

[Close]

BLAST of Lipoma-preferred partner vs. UniProt/SwissProt
Match: sp|Q15654|TRIP6_HUMAN (Thyroid receptor-interacting protein 6 OS=Homo sapiens OX=9606 GN=TRIP6 PE=1 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 1.032e-36
Identity = 62/134 (46.27%), Postives = 84/134 (62.69%), Query Frame = 3

Query:  744 LNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            L+ VFH  CF C  C A L    F+  ++R  C  C   +LEKC  C+  I DRI+R +G  YHP CFTC VC+  LDG  FTVD   ++ C+EDFH+++APRC  CG  I P+ G +E  RI++ D++FH+ C
Sbjct:  296 LDRVFHVGCFVCSTCRAQLRGQHFYAVERRAYCEGCYVATLEKCATCSQPILDRILRAMGKAYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIEDFHRKFAPRCSVCGGAIMPEPGQEETVRIVALDRSFHIGC 429

[Close]

BLAST of Lipoma-preferred partner vs. UniProt/SwissProt
Match: sp|Q9Z1Y4|TRIP6_MOUSE (Thyroid receptor-interacting protein 6 OS=Mus musculus OX=10090 GN=Trip6 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.173e-36
Identity = 66/147 (44.90%), Postives = 90/147 (61.22%), Query Frame = 3

Query:  711 GKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            G+  VG   G   L+ VFH  CF C  C A L    F+  ++R  C  C   +LEKC+ C+  I DRI+R +G  YHP CFTC VC+  LDG  FTVD   ++ C+EDFH+++APRC  CG  I P+ G +E  RI++ D++FH+ C
Sbjct:  287 GEDVVGDGAGVVALDRVFHIGCFVCSTCRAQLRGQHFYAVERRAYCESCYVATLEKCSTCSEPILDRILRAMGKAYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIEDFHRKFAPRCSVCGGAIMPEPGQEETVRIVALDRSFHIGC 433

[Close]

BLAST of Lipoma-preferred partner vs. UniProt/SwissProt
Match: sp|Q5F464|LPP_CHICK (Lipoma-preferred partner homolog OS=Gallus gallus OX=9031 GN=LPP PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.583e-36
Identity = 67/161 (41.61%), Postives = 92/161 (57.14%), Query Frame = 3

Query:  669 NECHRCRKPFELANGKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
              C RC        G++ VG+  G   ++ VFH  CF C  C   L    F+  +K+  C  C   +LE+C+VC   I +RI+R  G  YHP CFTC +C+  LDG  FTVD    + C+EDFHK++APRC  C EPI P  G +E  RI++ D+ FH++C
Sbjct:  406 GRCARC--------GENVVGEGTGCTAMDQVFHVECFTCMMCNNKLRGQPFYAVEKKAYCEPCYINTLEQCSVCAKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGNIHCIEDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVQC 558

[Close]

BLAST of Lipoma-preferred partner vs. UniProt/SwissProt
Match: sp|Q04584|ZYX_CHICK (Zyxin OS=Gallus gallus OX=9031 GN=ZYX PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 3.466e-36
Identity = 62/157 (39.49%), Postives = 96/157 (61.15%), Query Frame = 3

Query:  675 CHRCRKPFELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            C  CRKP  L+  + +V      L+ +FH  CF C++CE  L    F+   ++  C  C   +LEKC+VC   I DR+++  G+ YHP+CFTC +C+  L+G +F VD   +  C++D+H++YAPRC  C EPI P+ G  E  R+++ +K FH++C
Sbjct:  352 CGFCRKP--LSRTQPAVRA----LDCLFHVECFTCFKCEKQLQGQQFYNVDEKPFCEDCYAGTLEKCSVCKQTITDRMLKATGNSYHPQCFTCVMCHTPLEGASFIVDQANQPHCVDDYHRKYAPRCSVCSEPIMPEPGKDETVRVVALEKNFHMKC 502

[Close]

BLAST of Lipoma-preferred partner vs. TrEMBL
Match: A0A183QV67 (Uncharacterized protein OS=Schistosoma rodhaini OX=6188 PE=4 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.932e-52
Identity = 118/339 (34.81%), Postives = 173/339 (51.03%), Query Frame = 3

Query:  279 LSKTNYPKYTDEMTTATL-----IPVVHL-------------------------PSNNNSDYSTSTRKST-------SFNDPPKSNLSQVRKNSEAEVDALTNILIKSIANKTENKDSNPRSYTSSTYLPNQPYSSKRVSNTSSQPAVXXXXXXXXXXXXXXXXXXXNECHRCRKPFELANGKSSVGQIN---------GPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHE-SLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLECSGI 1154
            +S  + P Y    +++T+     IPVVHL                         P+   +D   ST+ ST       +  + P +  +    + EAEVDALTN+L++S+  +T +  S+  +  +ST  P+           +S PA S  ++  T S    +++  N C RCR+      G +  G +N         G L    H  CF CYRC A L  D++++  +RLLC  CV + ++E C+ C+  I DR++  LG PYHP CF C VC   LD + FT+DVH R+ CL DFHKRYAPRC +CG PI P  G QE +R++SG+  +HLEC G+
Sbjct:   17 ISSIDAPHYAQGSSSSTIGQSIVIPVVHLGASRGSISSSSYTMASHSSENLDNTPNALQTDNGESTKSSTFRTSSVLTAGNRPINRPAPPLSDPEAEVDALTNLLMQSM--ETRSSVSSAGAGGTSTSGPD---------GVNSSPASSICNSGDTTSAVTNATVGQNICFRCRRSLFPPEGTTLSGSLNSTNNVVTLTGALGVKLHVACFTCYRCAAPLKSDAYYHNLRRLLCPACVRDGAVEACSNCHRPIGDRVVHALGMPYHPNCFVCVVCAGRLDSRPFTIDVHGRLHCLTDFHKRYAPRCASCGRPIVPDAGCQEARRVVSGNSNYHLECFGV 344

[Close]

BLAST of Lipoma-preferred partner vs. TrEMBL
Match: A0A564XWH0 (Uncharacterized protein OS=Hymenolepis diminuta OX=6216 GN=WMSIL1_LOCUS634 PE=4 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.872e-50
Identity = 144/425 (33.88%), Postives = 199/425 (46.82%), Query Frame = 3

Query:  105 RRVFDLDSAFNERASPRAKLFSDLYGLLDMNQSTFPH----SRLYNFTLDA---RDREPYP-IDNRLSKTNYPKYTDEMTTATL-----IPVVHLPSNN-----------------NSDYSTST--RKSTSFNDPPKSNLSQVRKNSEAEVDALTNILIKSI-ANKTENKDSNP----------------RSYTSSTYLPN-----QPYSSKRVS-------NTSSQPAVXXXXXXXXXXXXXXXXXXX-----NECHRCRKPF------ELANGKSS--VGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHES-LEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLECSGI 1154
            RR   L+SAFNERA PR       +  +   Q T PH    S LY     +   RD    P  D  +  T+ P Y      ++      IPVVHL S                    S+Y T    RK+T    P  ++ + +  + EAEVDALT++LI+ + A ++     +P                R    +T LP+     Q  + +RV        N +  P   +S  +++ + S  SS  +     N C RCR+P        L  G  +  V  + G L    H+ CF CY C   LN   ++++  RLLC  CV +  +E C  C   I +RI+R LG PYHP CF C+VC+  LD K FTVDVH R  CLEDFHKRYAPRC  C  PI P+ G QE +R+++G+  +HL C G+
Sbjct:    8 RRSTYLNSAFNERAGPRTTDDRKYHHTVKPAQRT-PHYAQVSELYPMQASSGGPRDFRYRPNADIMMPGTDMPGYGQGRLGSSGGGGVPIPVVHLDSPTYHSSRGVYSGGLSRPEPASNYRTGGLLRKAT----PTVTSPTSLSTDPEAEVDALTDVLIQKMEAPRSTGGIMSPHGSDVDGTSSPVGSIRRGSGGTTTLPSRMIQFQQRTQQRVGSPSTANNNNAGSPLTVSSPRTSSPTNSSASSGITDSFLQNNCFRCRRPLVPPESATLGPGSPNPPVVTLTGALAVRLHEACFTCYNCRTKLNPQGYYHSLHRLLCPTCVRDGEVESCVNCGRPIGERIVRALGAPYHPGCFVCSVCHTHLDAKPFTVDVHGRPLCLEDFHKRYAPRCAVCSRPIAPEAGSQEARRVVAGNSNYHLACYGV 427

[Close]

BLAST of Lipoma-preferred partner vs. TrEMBL
Match: A0A3S5BA20 (Uncharacterized protein (Fragment) OS=Protopolystoma xenopodis OX=117903 GN=PXEA_LOCUS31606 PE=4 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.719e-49
Identity = 81/175 (46.29%), Postives = 107/175 (61.14%), Query Frame = 3

Query:  669 NECHRCRKPF---------------ELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHE-SLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            N C RCR+P                  A+  ++V Q+ G L    H  CF CYRC A L +D+++++ +RLLC  CV + ++E C+ C   I DR++R LG PYHP CF CTVC   LD + FTVDVH R  CL DFH+RYAPRC  CG PI P+ G QE +R+++GD  +HLEC
Sbjct:  193 NACFRCRRPLLPPEGSTLSPTTGLAGPASASANVIQLTGALAVRLHVACFTCYRCSAPLRLDAYYHSLRRLLCPACVRDGAVEACSNCRRPIGDRVVRALGLPYHPGCFVCTVCGLRLDARPFTVDVHGRPHCLADFHRRYAPRCAQCGRPIAPEAGSQEARRVVAGDANYHLEC 367

[Close]

BLAST of Lipoma-preferred partner vs. TrEMBL
Match: A0A183A8B3 (Uncharacterized protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS3198 PE=4 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.901e-48
Identity = 88/208 (42.31%), Postives = 120/208 (57.69%), Query Frame = 3

Query:  570 SSKRVSNTSSQPAVXXXXXXXXXXXXXXXXXXXNECHRCRKPF------------ELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHE-SLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLECSGI 1154
            S+  V N +S+P       ST    +   + SSN C RCR+                AN  S+V  + G L+   H  CF CYRC A L  D+++++ +RLLC  CV + ++E C+ C   I DRI+  LG PYHP CF C VC   LD + FT+D+H R+ CL+DFH+RYAPRC  C  PI P+ G QE +R++SGD  +HLEC G+
Sbjct:  202 STSSVHNAASEPGSVGLLGSTLVGANSSGTQSSNSCFRCRRALIPPDGSTLNPSVSTANNSSNVVTLTGALSVRLHVACFTCYRCAAPLRPDAYYHSLRRLLCPACVRDGAVETCSNCRRPIGDRIVHALGLPYHPNCFVCVVCAGRLDSRPFTIDIHGRLHCLDDFHRRYAPRCAVCARPIAPEPGSQEARRVVSGDSNYHLECFGV 409

[Close]

BLAST of Lipoma-preferred partner vs. TrEMBL
Match: A0A3P7SR76 (Uncharacterized protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS1103 PE=4 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 8.706e-48
Identity = 81/171 (47.37%), Postives = 102/171 (59.65%), Query Frame = 3

Query:  669 NECHRCRKPF------ELANGKSS--VGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHES-LEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLECSGI 1154
            N C RCR+P        L  G  S  V  + G L    H+TCF CY C   LN   ++++  RLLC  CV +  +E C  C   I +RI+R LG PYHP CF C+VC+  LD K FTVDVH R  CLEDFHKRYAPRC  C  PI P+ G QE +R+++G+  +HL C G+
Sbjct:   57 NNCFRCRRPLIPPESATLGPGSPSPPVVTLTGALAVRLHETCFTCYNCRTKLNPQGYYHSLHRLLCPTCVRDGEVESCVNCGRPIGERIVRALGAPYHPGCFVCSVCHTHLDAKPFTVDVHGRPLCLEDFHKRYAPRCAVCSRPIAPEAGSQEARRVVAGNSNYHLSCYGV 227

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Cavefish
Match: lpp (lipoma-preferred partner homolog [Source:NCBI gene;Acc:103032787])

HSP 1 Score: 145.206 bits (365), Expect = 9.699e-39
Identity = 82/249 (32.93%), Postives = 123/249 (49.40%), Query Frame = 3

Query:  414 PKSNLSQVRKNSEAEVDALTNILIKSIANKTENKDSNPRSYTSSTYLPNQPY---SSKRVSNTSSQPAVXXXXXXXXXXXXXXXXXXXNECHRCRKPFELANGKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            P+  L + R + +AE+D+LT+IL   + + +  K   P+    S   P +     + K + + +  P+                      C  C        G++ +G+  G   ++ VFH  CF C  C   L    F+  +K+  C  C   +LE C +C   I +RI+R  G PYHP CFTC VC+  LDG  FTVD    + C+EDFHK++APRC  C EPI P  G +E  RI++ D+ FH++C
Sbjct:  106 PEKTLEERRSSLDAEIDSLTSIL-ADLESSSPYKPRTPQGPGQSMARPEEELDRLTKKMLYDMNHPPS----------------EEYFGRCASC--------GENVLGEGTGCTAMDQVFHVDCFICMTCSCKLRGKPFYAVEKKAYCEPCYINTLETCNICAKPIMERILRATGKPYHPHCFTCVVCHRSLDGIPFTVDASNHIHCIEDFHKKFAPRCSVCQEPIMPAPGQEETVRIVALDRDFHVQC 329

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Cavefish
Match: ENSAMXT00000040849.1 (thyroid receptor-interacting protein 6-like [Source:NCBI gene;Acc:103041331])

HSP 1 Score: 148.288 bits (373), Expect = 1.636e-38
Identity = 60/134 (44.78%), Postives = 85/134 (63.43%), Query Frame = 3

Query:  744 LNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            +  VFH  CF C  C A L    F+   K+  C  C   +LE+C+ C+  I DRI+R +G  YHP+CF C VC CCLDG  FTVD   ++ C++DFH+++APRC  C +PI P+ G +E  RI++ D++FH+ C
Sbjct:  402 MEQVFHVECFTCITCHARLRGQPFYALDKKSYCESCYISTLERCSKCSNPILDRILRAMGKAYHPRCFNCVVCGCCLDGVPFTVDATSQIHCIDDFHRKFAPRCSVCCQPIMPEPGQEETVRIVALDRSFHVNC 535

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Cavefish
Match: ENSAMXT00000036341.1 (thyroid receptor-interacting protein 6-like [Source:NCBI gene;Acc:103041331])

HSP 1 Score: 147.902 bits (372), Expect = 1.871e-38
Identity = 60/134 (44.78%), Postives = 85/134 (63.43%), Query Frame = 3

Query:  744 LNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            +  VFH  CF C  C A L    F+   K+  C  C   +LE+C+ C+  I DRI+R +G  YHP+CF C VC CCLDG  FTVD   ++ C++DFH+++APRC  C +PI P+ G +E  RI++ D++FH+ C
Sbjct:  394 MEQVFHVECFTCITCHARLRGQPFYALDKKSYCESCYISTLERCSKCSNPILDRILRAMGKAYHPRCFNCVVCGCCLDGVPFTVDATSQIHCIDDFHRKFAPRCSVCCQPIMPEPGQEETVRIVALDRSFHVNC 527

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Cavefish
Match: ENSAMXT00000037949.1 (thyroid receptor-interacting protein 6-like [Source:NCBI gene;Acc:103041331])

HSP 1 Score: 147.902 bits (372), Expect = 1.871e-38
Identity = 60/134 (44.78%), Postives = 85/134 (63.43%), Query Frame = 3

Query:  744 LNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            +  VFH  CF C  C A L    F+   K+  C  C   +LE+C+ C+  I DRI+R +G  YHP+CF C VC CCLDG  FTVD   ++ C++DFH+++APRC  C +PI P+ G +E  RI++ D++FH+ C
Sbjct:  394 MEQVFHVECFTCITCHARLRGQPFYALDKKSYCESCYISTLERCSKCSNPILDRILRAMGKAYHPRCFNCVVCGCCLDGVPFTVDATSQIHCIDDFHRKFAPRCSVCCQPIMPEPGQEETVRIVALDRSFHVNC 527

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Cavefish
Match: lpp (lipoma-preferred partner homolog [Source:NCBI gene;Acc:103032787])

HSP 1 Score: 144.821 bits (364), Expect = 2.080e-37
Identity = 64/147 (43.54%), Postives = 88/147 (59.86%), Query Frame = 3

Query:  711 GKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            G++ +G+  G   ++ VFH  CF C  C   L    F+  +K+  C  C   +LE C +C   I +RI+R  G PYHP CFTC VC+  LDG  FTVD    + C+EDFHK++APRC  C EPI P  G +E  RI++ D+ FH++C
Sbjct:  372 GENVLGEGTGCTAMDQVFHVDCFICMTCSCKLRGKPFYAVEKKAYCEPCYINTLETCNICAKPIMERILRATGKPYHPHCFTCVVCHRSLDGIPFTVDASNHIHCIEDFHKKFAPRCSVCQEPIMPAPGQEETVRIVALDRDFHVQC 518

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010404.1 (pep scaffold:Pmarinus_7.0:GL477924:140:5584:1 gene:ENSPMAG00000009420.1 transcript:ENSPMAT00000010404.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 88.9669 bits (219), Expect = 1.906e-21
Identity = 42/91 (46.15%), Postives = 61/91 (67.03%), Query Frame = 3

Query:  858 ESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRP-QNG-GQENKRIISGD 1124
            ++ +KC  C  +I + I++ +G  YHP CF C VCN CLDG  FTVD   R++C++D+H+ +AP+C ACG PI P Q+G G   K++ SG 
Sbjct:    6 QNADKCFECGHLIMETILQAVGKSYHPTCFRCVVCNECLDGVPFTVDRDHRVYCVQDYHRTFAPKCAACGLPILPNQSGCGSVRKQLSSGQ 96

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010401.1 (pep scaffold:Pmarinus_7.0:GL477924:137:5584:1 gene:ENSPMAG00000009420.1 transcript:ENSPMAT00000010401.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 85.5001 bits (210), Expect = 2.524e-20
Identity = 38/79 (48.10%), Postives = 54/79 (68.35%), Query Frame = 3

Query:  858 ESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKR-YAPRCDACGEPIRPQNG 1091
            ++ +KC  C  +I + I++ +G  YHP CF C VCN CLDG  FTVD   R++C++D+H+R +AP+C ACG PI P  G
Sbjct:    7 QNADKCFECGHLIMETILQAVGKSYHPTCFRCVVCNECLDGVPFTVDRDHRVYCVQDYHRRTFAPKCAACGLPILPNQG 85

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Sea Lamprey
Match: lims2 (LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56])

HSP 1 Score: 59.3066 bits (142), Expect = 5.267e-10
Identity = 46/154 (29.87%), Postives = 65/154 (42.21%), Query Frame = 3

Query:  708 NGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEK------CTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHE---RMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLE 1142
            +G+  VG++   +N  +H  CF C  C   L    F     R LC  C +    K      C  C+ II+++ +     PYHP  F CT C     GK  T D  E    ++CL    K   P C AC  PI       E + + +  K +H+E
Sbjct:  139 SGEFIVGRVIKAMNNSWHPECFRCNICSEMLADVGFVKNAGRHLCRPCHNREKAKGLGKYICQKCHAIIDEQPLLFKNDPYHPDHFNCTNC-----GKELTADARELKGELYCLPCHDKMGIPICGACRRPI-------EGRVVNAMGKQWHVE 280

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Sea Lamprey
Match: ablim1a (actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41])

HSP 1 Score: 59.3066 bits (142), Expect = 1.184e-9
Identity = 30/99 (30.30%), Postives = 44/99 (44.44%), Query Frame = 3

Query:  675 CHRCRKPFELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHES-LEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNC 968
            CH+C +P +        G+     +  FH  CF C  C  +L  + FF      LC+    +    +CT C   +   ++  LG  YHP+CF C VC C
Sbjct:   14 CHKCSEPCK--------GEALRVQDRHFHIKCFICKVCGCDLAQNGFFMKSGEYLCTHDYQQQHGTRCTGCGDFVEGEVVTALGKTYHPQCFVCAVCRC 104

HSP 2 Score: 58.151 bits (139), Expect = 2.873e-9
Identity = 38/152 (25.00%), Postives = 63/152 (41.45%), Query Frame = 3

Query:  726 GQINGPLNTVFHQTCFNCYRCEANLNV-DSFFYAQKRLLCSRCVHE---------SLEKCTVCNF-IINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLECS 1148
            G++   L   +H  CF C  C       D   +  K  LC RC+           +   CT C   I+N + +  L   +H  CF C  C   L G+  + D     +C +D+  ++  +C+ CG+ I         K + +G+K +H  C+
Sbjct:   82 GEVVTALGKTYHPQCFVCAVCRCPFPAGDRVTFNGKDCLCQRCIQPVATNAKDIGASTNCTGCGSDIMNGQALLALDKQWHLGCFKCKTCGKVLTGEYISKD--GVPYCEQDYQSQFGIKCEECGKFI-------TGKVLEAGEKHYHPSCA 224

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007081.1 (pep scaffold:Pmarinus_7.0:GL476780:360940:430661:-1 gene:ENSPMAG00000006392.1 transcript:ENSPMAT00000007081.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 57.7658 bits (138), Expect = 3.268e-9
Identity = 34/109 (31.19%), Postives = 47/109 (43.12%), Query Frame = 3

Query:  672 ECHRCRKPFELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSR-CVHESLEKCTVCNFII--NDRIIRVLGHPYHPKCFTCTVCNCCLDGKAF 989
            +C +CRK          +G+I   L   +H TCF C  C        F        C +  V     KC  C+F +   D+ I  LGH +H  CF C VC+  L+G+ F
Sbjct:  477 DCAKCRKKI--------MGEIMHALRQTWHTTCFVCASCGKPFGNSLFHMEDGEPYCEKDYVVLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPF 577

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Nematostella
Match: EDO39581 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S9J0])

HSP 1 Score: 109.768 bits (273), Expect = 1.347e-27
Identity = 55/147 (37.41%), Postives = 82/147 (55.78%), Query Frame = 3

Query:  711 GKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            G+   G+  G   ++ +FH  CF C +C   L    F+       C     +SLE C  C+  I DRI+R  G  +HP CF C  C+  LDG  FT+D   ++ CLED++++Y+PRC +C + I P++G  E  RI+S +K FH+ C
Sbjct:   40 GQKVSGEGTGCTAMDKLFHIKCFICVKCGCQLTGKVFYKVDNDAYCEADYLDSLETCWYCHQHITDRILRATGKCFHPHCFNCEECHKNLDGVPFTLDNFNKVHCLEDYYRKYSPRCASCHQLILPEDGQDETVRIVSMNKDFHVRC 186

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Nematostella
Match: EDO32541 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUS6])

HSP 1 Score: 105.916 bits (263), Expect = 3.929e-27
Identity = 53/147 (36.05%), Postives = 78/147 (53.06%), Query Frame = 3

Query:  744 LNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEK------CTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLECSGITIKN 1166
            +  ++H  CF C+ C   L    F+  + R+ C +  ++SLE+      C  C  +I  RI++ LG  YHP CF C VC   L+G  FTVD    ++C+ D+H++Y+PRC AC EPI P     E  R++   K FH  C    + N
Sbjct:    1 MGNLYHAQCFLCHTCGKELRGQEFYRLENRVYCKQ-DYKSLERHQRPKRCHSCKEVIGQRILQTLGRDYHPVCFRCCVCEVELEGTPFTVDRQNAIYCIPDYHRKYSPRCHACREPIAPDEKSDETIRVVCLGKQFHDRCFKCEVTN 146

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Nematostella
Match: EDO41181 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S548])

HSP 1 Score: 73.559 bits (179), Expect = 1.065e-14
Identity = 46/135 (34.07%), Postives = 62/135 (45.93%), Query Frame = 3

Query:  687 RKPFELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLE-KCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFT-VDVHER---MFCLEDFHKRYAPRCDACGEPI 1076
            +K    A  K  +GQ+   L   +H   F C  CEA L   +FF    +  C R  H++   +C  CN  I D  +  L   +HP+ F C  C     G  F     HER    FC ED++  +APRC  CG+PI
Sbjct:   22 KKGMCAACNKPIIGQVCTALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCERDYHDTFAPRCAYCNGPILDSCVTALDQTWHPEHFVCAEC-----GNPFGDTGFHERDGKPFCREDYYAMFAPRCGGCGQPI 151

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Nematostella
Match: LIMPET (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RFX6])

HSP 1 Score: 67.3958 bits (163), Expect = 5.329e-12
Identity = 54/165 (32.73%), Postives = 72/165 (43.64%), Query Frame = 3

Query:  675 CHRCR-----KPFELANGKSSVGQIN-GPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEK-CTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGD-KTFHLEC 1145
            CH CR     K     NG  + G+   G  +  FH  CF C  C+  +    F    +R LC+ C      K C  CN +I    ++  G  YH +CFTC  C+  L G  FT     R  C   + +RYA RC AC   I      + N + ++ D K FH EC
Sbjct:  367 CHGCRGINPSKVCAACNGDFAPGEKKVGYQSKTFHDKCFICDECKQPIGSKQFIRRDERRLCNNCFDSKFAKVCVKCNQVIKTSSVQHAGSTYHSECFTCHHCDKPLAGSPFTKQ-EGRNVCQNCYRERYAKRCGACHNLI------EGNTKFVAYDEKYFHREC 524

HSP 2 Score: 52.373 bits (124), Expect = 3.017e-7
Identity = 65/270 (24.07%), Postives = 108/270 (40.00%), Query Frame = 3

Query:  342 VHLPSNNNSDYST-STRKSTSFNDPP---KSNLSQV---------RKNSEAEVDALTNILIKSIANKTENKDSNPRSYTSSTYLPNQPYSSKRVSNTSSQPAVXX-------XXXXXXXXXXXXXXXXXNECHRCRKPFELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQK-RLLCSRCVHESLE-KCTVCN-FIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRP 1082
            +H+ S NN+D +T   R      DPP    S+L Q          R  +  E+    ++L +    K ++  +  R+   S  +P Q +SSK     +    ++           +      R      + C RC  P    +  +   +  GP ++ +H  CF C   +  L VD  + ++   + C R   E L+ +C  C   I      + L   +HP    C+ C+  L  + F V V     C   + + +A RC+ACGEPI P
Sbjct:   62 LHVLSTNNNDQNTPEERMGVEEEDPPMLQGSHLQQAMMEGYEWVPRGLTSEEIQIYMSLLPEDKIPKLKSLGAQHRTKQLSLQIPLQDFSSKHCKKLTLDQKMAMDDFCEKRIKTALGVGAVRACMAQPSTCKRCNGPVNPGD-MALFAERLGP-DSCWHVKCFTCEE-DGELLVDLIYCSKDDEIYCCRHWGEKLKPRCAGCEELIYVGEYSQALEKNWHPGHLCCSYCDESLSNQKF-VTVEGSPSCFRCYDENFANRCEACGEPIGP 327

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Nematostella
Match: EDO49798 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RFX7])

HSP 1 Score: 60.8474 bits (146), Expect = 3.234e-10
Identity = 43/139 (30.94%), Postives = 65/139 (46.76%), Query Frame = 3

Query:  672 ECHRCRKPFELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLE-KCTVCNFII-NDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRP 1082
            EC  C     +A   S  GQ     +T +H +CF C  C+  L    +FY   ++ C R   E+L+ +C  C+ II  ++        +H + F C  C+C L G  + +    + +C   F   YA  CD+CGEPI P
Sbjct:  174 ECGECVTAGSMAVYASRAGQ-----HTCWHASCFICTTCKELLVDLIYFYKDSKVYCGRHHAETLKPRCAACDEIIFAEQCTEAEDSCWHVQHFCCFECDCPLGGMRYVMR-DNKPYCCHCFESLYAEFCDSCGEPIEP 306

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Medaka
Match: ENSORLT00000008337.2 (thyroid hormone receptor interactor 6 [Source:NCBI gene;Acc:101164348])

HSP 1 Score: 160.229 bits (404), Expect = 5.755e-43
Identity = 71/161 (44.10%), Postives = 98/161 (60.87%), Query Frame = 3

Query:  669 NECHRCRKPFELANGKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
              C RC        G + VG  +G   +  VFH  CF C  C   L    F+  +K+  C  C   +LE+C+ C+  I DRI+R +G  YHP+CFTC VCNCCLDG  FTVD   ++ C++DFH++YAPRC  CGEPI P+ G +E  RI++ D++FH++C
Sbjct:  367 GRCARC--------GDNVVGDGSGCIAMEQVFHVECFTCITCHTRLRGKPFYALEKKSYCENCYISTLERCSKCSKPILDRILRAMGKAYHPRCFTCVVCNCCLDGVPFTVDATSQIHCIDDFHRKYAPRCSVCGEPIMPEPGQEETVRIVALDRSFHVDC 519

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Medaka
Match: lpp (lipoma-preferred partner homolog [Source:NCBI gene;Acc:101167359])

HSP 1 Score: 144.05 bits (362), Expect = 3.437e-37
Identity = 63/147 (42.86%), Postives = 91/147 (61.90%), Query Frame = 3

Query:  711 GKSSVGQING--PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            G++ VG+  G   ++ VFH +CF C  C   L    F+  +K+  C  C  ++LE C++C+  I +RI+R  G  YHP CF C VC+  LDG  FTVD   ++ C+EDFHK++APRC  C EPI P  G +E  RI++ D+ FH++C
Sbjct:  370 GENVVGEGTGCTAMDQVFHVSCFICVTCGTKLRGKPFYAVEKKAFCEPCYIKTLETCSICSKPIMERILRATGKAYHPHCFICVVCHRSLDGIPFTVDASNQIHCIEDFHKKFAPRCCVCSEPIMPAPGQEETVRIVALDRDFHVQC 516

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Medaka
Match: LIMD1 (LIM domains containing 1 [Source:NCBI gene;Acc:101175430])

HSP 1 Score: 129.798 bits (325), Expect = 3.070e-32
Identity = 52/139 (37.41%), Postives = 80/139 (57.55%), Query Frame = 3

Query:  744 LNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSR-----CVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            + +++H +CF C  C   L   +F+Y   ++ C          +S +KC  C  +I D I++ LG  YHP CF C +CN  LDG  FTVD   +++C+ D+H+  AP+C AC +PI P  G  E  R++S +K +H+EC
Sbjct:  355 MGSLYHDSCFTCTACSRRLRGKAFYYVGGKVFCEEDFLYSGFQQSADKCNACGHLIMDMILQALGKSYHPGCFRCVICNESLDGVPFTVDTENKIYCVRDYHRVLAPKCAACNQPILPSEGSDETIRVVSMEKDYHVEC 493

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Medaka
Match: wtip (WT1 interacting protein [Source:NCBI gene;Acc:101158185])

HSP 1 Score: 124.405 bits (311), Expect = 4.392e-30
Identity = 57/162 (35.19%), Postives = 85/162 (52.47%), Query Frame = 3

Query:  675 CHRCRKPFELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSR-----CVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            C +C K      G     Q    +  ++H  CF C  C   L   +F+    ++ C          ++ EKC VC  +I + I++ LG  YHP CF C VC   LDG  FTVDV   ++C++D+H  +AP+C +C +PI P  G +E  R++S DK +H+EC
Sbjct:  490 CIKCGK------GVYGASQACQAMGNLYHTNCFTCCSCGRRLRGKAFYNVNGKVYCEEDFLYSGFQQTAEKCFVCGHLIMEMILQALGKSYHPGCFRCVVCKEGLDGVPFTVDVENNIYCVKDYHTVFAPKCASCNQPILPAQGSEETIRVVSMDKDYHVEC 645

[Close]

BLAST of Lipoma-preferred partner vs. Ensembl Medaka
Match: wtip (WT1 interacting protein [Source:NCBI gene;Acc:101158185])

HSP 1 Score: 123.635 bits (309), Expect = 8.953e-30
Identity = 54/155 (34.84%), Postives = 82/155 (52.90%), Query Frame = 3

Query:  696 FELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSR-----CVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
             +   G     Q    +  ++H  CF C  C   L   +F+    ++ C          ++ EKC VC  +I + I++ LG  YHP CF C VC   LDG  FTVDV   ++C++D+H  +AP+C +C +PI P  G +E  R++S DK +H+EC
Sbjct:  491 IKCGKGVYGASQACQAMGNLYHTNCFTCCSCGRRLRGKAFYNVNGKVYCEEDFLYSGFQQTAEKCFVCGHLIMEMILQALGKSYHPGCFRCVVCKEGLDGVPFTVDVENNIYCVKDYHTVFAPKCASCNQPILPAQGSEETIRVVSMDKDYHVEC 645

[Close]

BLAST of Lipoma-preferred partner vs. Planmine SMEST
Match: SMESG000031084.1 (SMESG000031084.1)

HSP 1 Score: 701.049 bits (1808), Expect = 0.000e+0
Identity = 360/361 (99.72%), Postives = 361/361 (100.00%), Query Frame = 3

Query:   84 MHYNHPFRRVFDLDSAFNERASPRAKLFSDLYGLLDMNQSTFPHSRLYNFTLDARDREPYPIDNRLSKTNYPKYTDEMTTATLIPVVHLPSNNNSDYSTSTRKSTSFNDPPKSNLSQVRKNSEAEVDALTNILIKSIANKTENKDSNPRSYTSSTYLPNQPYSSKRVSNTSSQPAVXXXXXXXXXXXXXXXXXXXNECHRCRKPFELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLECSGITIKN 1166
            MHYNHPFRRVFDLDSAFNERASPRAKLFSDLYGLLDMNQSTFPHSRLYNFTLDARDREPYP+DNRLSKTNYPKYTDEMTTATLIPVVHLPSNNNSDYSTSTRKSTSFNDPPKSNLSQVRKNSEAEVDALTNILIKSIANKTENKDSNPRSYTSSTYLPNQPYSSKRVSNTSSQPAVSTSSNSTTGSISRQSSLSSNECHRCRKPFELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLECSGITIKN
Sbjct:    1 MHYNHPFRRVFDLDSAFNERASPRAKLFSDLYGLLDMNQSTFPHSRLYNFTLDARDREPYPLDNRLSKTNYPKYTDEMTTATLIPVVHLPSNNNSDYSTSTRKSTSFNDPPKSNLSQVRKNSEAEVDALTNILIKSIANKTENKDSNPRSYTSSTYLPNQPYSSKRVSNTSSQPAVSTSSNSTTGSISRQSSLSSNECHRCRKPFELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLECSGITIKN 361

[Close]

BLAST of Lipoma-preferred partner vs. Planmine SMEST
Match: SMESG000038145.1 (SMESG000038145.1)

HSP 1 Score: 115.161 bits (287), Expect = 5.841e-28
Identity = 51/140 (36.43%), Postives = 80/140 (57.14%), Query Frame = 3

Query:  741 PLNTVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSR-----CVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
             L  ++H  CF C  C  +L    F+  Q+++ C         H+S++ C  C  I+ + I+  LG  +HP+CF C++C+ CLDG  FTVD +  ++C+ D+H  +APRC  C +PI P+    E  RI+  D+ FH+EC
Sbjct:  220 ALGNLYHSNCFTCCYCNRSLRGRVFYKDQEKIYCENDYMVFGFHKSVKVCFACGHIVTETILEALGKDFHPRCFKCSICHKCLDGIPFTVDRNNNIYCIIDYHNTFAPRCAICLQPIIPRKDSDEVVRIVVNDRDFHVEC 359

[Close]

BLAST of Lipoma-preferred partner vs. Planmine SMEST
Match: SMESG000031934.1 (SMESG000031934.1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.849e-23
Identity = 50/165 (30.30%), Postives = 84/165 (50.91%), Query Frame = 3

Query:  696 FELANGKSSVGQINGPLN----------TVFHQTCFNCYRCEANLNVDSFFYAQKRLLCSR----C-VHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            F   NG     Q +G +N           +FH  CF+C  C   L    F+    +L C      C   +S ++C +C  +I ++I++  G+ YH  CF CT+CN CLDG  FT+D   ++ C++D++  ++  C++C +PI P+      K+++  +K FH  C
Sbjct:    3 FNSINGSVLCCQCSGLINKAEDACQAMGMLFHNNCFSCCYCYRQLKGKIFYKDHGKLFCEEDYLYCGFQQSADRCKICGHMITNKILKADGNYYHVDCFRCTICNECLDGAPFTLDKDGKILCIKDYYLSHSSNCESCNQPIIPEKNSLSTKKVVVLEKEFHFAC 167

[Close]

BLAST of Lipoma-preferred partner vs. Planmine SMEST
Match: SMESG000072127.1 (SMESG000072127.1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.637e-12
Identity = 43/131 (32.82%), Postives = 65/131 (49.62%), Query Frame = 3

Query:  756 FHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVHESL-EKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            +H+ CF C  C   +   SF   ++ ++C  C  E   +KCT C  +I    +   G P+H +CFTCT C+  L G  FT    E+ +C E + + +A +C  C +PI    G    K I   D+ +H EC
Sbjct:  374 WHEECFLCVDCRQPIGTKSFIPREQDIVCVPCYEEKYAQKCTKCVGVIRRGGVTYKGSPWHKECFTCTHCSKQLAGIKFTSK-EEKPYCAECYGELFAKKCSKCTKPITGFGG---CKFISFEDRHWHSEC 500

[Close]

BLAST of Lipoma-preferred partner vs. Planmine SMEST
Match: SMESG000009923.1 (SMESG000009923.1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.009e-10
Identity = 43/131 (32.82%), Postives = 60/131 (45.80%), Query Frame = 3

Query:  756 FHQTCFNCYRCEANLNVDSFFYAQKRLLCSRCVH-ESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGKAFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTFHLEC 1145
            +H+ CF C  C  ++   SF     ++ C  C   +  +KC  C+ II    I   G P+H +CF CT C   L    FT    E+ +C E F + +  RC  C +PI    G    K I  GD  +H EC
Sbjct:  387 WHEDCFICADCNQSIGTKSFIPINGKISCIGCYENKHAQKCFKCSEIIRKSGITYKGDPWHKECFLCTSCQKMLSESKFTSK-EEKPYCTECFIELFCKRCKKCTQPISGFGGC---KFISVGDDHWHTEC 513

The following BLAST results are available for this feature:

BLAST of Lipoma-preferred partner vs. Ensembl Human
BLAST of Lipoma-preferred partner vs. Ensembl Celegans
BLAST of Lipoma-preferred partner vs. Ensembl Fly
BLAST of Lipoma-preferred partner vs. Ensembl Zebrafish
BLAST of Lipoma-preferred partner vs. Ensembl Xenopus
BLAST of Lipoma-preferred partner vs. Ensembl Mouse
BLAST of Lipoma-preferred partner vs. UniProt/SwissProt
BLAST of Lipoma-preferred partner vs. TrEMBL
BLAST of Lipoma-preferred partner vs. Ensembl Cavefish
BLAST of Lipoma-preferred partner vs. Ensembl Sea Lamprey
BLAST of Lipoma-preferred partner vs. Ensembl Yeast
BLAST of Lipoma-preferred partner vs. Ensembl Nematostella
BLAST of Lipoma-preferred partner vs. Ensembl Medaka
BLAST of Lipoma-preferred partner vs. Planmine SMEST

BLAST of Lipoma-preferred partner vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
TRIP6	2.148e-37	46.27	thyroid hormone receptor interactor 6 [Source:HGNC...	[more]
LPP	5.286e-36	41.61	LIM domain containing preferred translocation part...	[more]
LPP	5.853e-36	41.61	LIM domain containing preferred translocation part...	[more]
LPP	5.853e-36	41.61	LIM domain containing preferred translocation part...	[more]
ZYX	1.226e-33	41.40	zyxin [Source:HGNC Symbol;Acc:HGNC:13200]	[more]

BLAST of Lipoma-preferred partner vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
zyx-1	2.279e-32	40.82	Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4]	[more]
zyx-1	2.539e-32	40.82	Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4]	[more]
zyx-1	2.539e-32	40.82	Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4]	[more]
zyx-1	2.846e-32	40.00	Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4]	[more]
zyx-1	5.206e-32	40.82	Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4]	[more]

BLAST of Lipoma-preferred partner vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Zyx	3.813e-35	42.66	gene:FBgn0011642 transcript:FBtr0309882	[more]
Zyx	4.429e-35	42.66	gene:FBgn0011642 transcript:FBtr0089214	[more]
Zyx	4.658e-35	42.66	gene:FBgn0011642 transcript:FBtr0089211	[more]
Zyx	4.658e-35	42.66	gene:FBgn0011642 transcript:FBtr0345298	[more]
Zyx	4.759e-35	42.66	gene:FBgn0011642 transcript:FBtr0089210	[more]

BLAST of Lipoma-preferred partner vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
trip6	3.742e-40	45.52	thyroid hormone receptor interactor 6 [Source:ZFIN...	[more]
trip6	3.742e-40	45.52	thyroid hormone receptor interactor 6 [Source:ZFIN...	[more]
trip6	3.742e-40	45.52	thyroid hormone receptor interactor 6 [Source:ZFIN...	[more]
trip6	3.823e-40	45.52	thyroid hormone receptor interactor 6 [Source:ZFIN...	[more]
CR352261.1	3.899e-40	45.52	thyroid hormone receptor interactor 6 [Source:NCBI...	[more]

BLAST of Lipoma-preferred partner vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
nudt17	1.844e-40	34.98	nudix hydrolase 17 [Source:Xenbase;Acc:XB-GENE-979...	[more]
nudt17	6.736e-39	42.86	nudix hydrolase 17 [Source:Xenbase;Acc:XB-GENE-979...	[more]
nudt17	7.428e-39	42.86	nudix hydrolase 17 [Source:Xenbase;Acc:XB-GENE-979...	[more]
gnpda1	6.754e-32	37.04	glucosamine-6-phosphate deaminase 1 [Source:Xenbas...	[more]
arf4	4.467e-31	35.48	ADP ribosylation factor 4 [Source:Xenbase;Acc:XB-G...	[more]

BLAST of Lipoma-preferred partner vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Trip6	1.677e-37	44.90	thyroid hormone receptor interactor 6 [Source:MGI ...	[more]
Lpp	7.950e-37	41.61	LIM domain containing preferred translocation part...	[more]
Lpp	1.056e-36	41.61	LIM domain containing preferred translocation part...	[more]
Lpp	1.056e-36	41.61	LIM domain containing preferred translocation part...	[more]
Zyx	2.459e-35	41.40	zyxin [Source:MGI Symbol;Acc:MGI:103072]	[more]

BLAST of Lipoma-preferred partner vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q3SX26\|TRIP6_BOVIN	9.943e-37	44.90	Thyroid receptor-interacting protein 6 OS=Bos taur...	[more]
sp\|Q15654\|TRIP6_HUMAN	1.032e-36	46.27	Thyroid receptor-interacting protein 6 OS=Homo sap...	[more]
sp\|Q9Z1Y4\|TRIP6_MOUSE	1.173e-36	44.90	Thyroid receptor-interacting protein 6 OS=Mus musc...	[more]
sp\|Q5F464\|LPP_CHICK	1.583e-36	41.61	Lipoma-preferred partner homolog OS=Gallus gallus ...	[more]
sp\|Q04584\|ZYX_CHICK	3.466e-36	39.49	Zyxin OS=Gallus gallus OX=9031 GN=ZYX PE=1 SV=1	[more]

BLAST of Lipoma-preferred partner vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A183QV67	1.932e-52	34.81	Uncharacterized protein OS=Schistosoma rodhaini OX...	[more]
A0A564XWH0	1.872e-50	33.88	Uncharacterized protein OS=Hymenolepis diminuta OX...	[more]
A0A3S5BA20	2.719e-49	46.29	Uncharacterized protein (Fragment) OS=Protopolysto...	[more]
A0A183A8B3	2.901e-48	42.31	Uncharacterized protein OS=Echinostoma caproni OX=...	[more]
A0A3P7SR76	8.706e-48	47.37	Uncharacterized protein OS=Rodentolepis nana OX=10...	[more]

BLAST of Lipoma-preferred partner vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
lpp	9.699e-39	32.93	lipoma-preferred partner homolog [Source:NCBI gene...	[more]
ENSAMXT00000040849.1	1.636e-38	44.78	thyroid receptor-interacting protein 6-like [Sourc...	[more]
ENSAMXT00000036341.1	1.871e-38	44.78	thyroid receptor-interacting protein 6-like [Sourc...	[more]
ENSAMXT00000037949.1	1.871e-38	44.78	thyroid receptor-interacting protein 6-like [Sourc...	[more]
lpp	2.080e-37	43.54	lipoma-preferred partner homolog [Source:NCBI gene...	[more]

BLAST of Lipoma-preferred partner vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSPMAT00000010404.1	1.906e-21	46.15	pep scaffold:Pmarinus_7.0:GL477924:140:5584:1 gene...	[more]
ENSPMAT00000010401.1	2.524e-20	48.10	pep scaffold:Pmarinus_7.0:GL477924:137:5584:1 gene...	[more]
lims2	5.267e-10	29.87	LIM and senescent cell antigen-like domains 2 [Sou...	[more]
ablim1a	1.184e-9	30.30	actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-...	[more]
ENSPMAT00000007081.1	3.268e-9	31.19	pep scaffold:Pmarinus_7.0:GL476780:360940:430661:-...	[more]

BLAST of Lipoma-preferred partner vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Lipoma-preferred partner vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO39581	1.347e-27	37.41	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO32541	3.929e-27	36.05	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO41181	1.065e-14	34.07	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
LIMPET	5.329e-12	32.73	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO49798	3.234e-10	30.94	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Lipoma-preferred partner vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSORLT00000008337.2	5.755e-43	44.10	thyroid hormone receptor interactor 6 [Source:NCBI...	[more]
lpp	3.437e-37	42.86	lipoma-preferred partner homolog [Source:NCBI gene...	[more]
LIMD1	3.070e-32	37.41	LIM domains containing 1 [Source:NCBI gene;Acc:101...	[more]
wtip	4.392e-30	35.19	WT1 interacting protein [Source:NCBI gene;Acc:1011...	[more]
wtip	8.953e-30	34.84	WT1 interacting protein [Source:NCBI gene;Acc:1011...	[more]

BLAST of Lipoma-preferred partner vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000031084.1	0.000e+0	99.72	SMESG000031084.1	[more]
SMESG000038145.1	5.841e-28	36.43	SMESG000038145.1	[more]
SMESG000031934.1	2.849e-23	30.30	SMESG000031934.1	[more]
SMESG000072127.1	8.637e-12	32.82	SMESG000072127.1	[more]
SMESG000009923.1	1.009e-10	32.82	SMESG000009923.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30019594 ID=SMED30019594|Name=Lipoma-preferred partner|organism=Schmidtea mediterranea sexual|type=transcript|length=1398bp
ATTTTTTTACCTAAGGCAATTCATATTGATTTTTAGAAACAGCAGTTTTT
TTGGAGTTGTAATCTATATAATACGATCATTTGATGCATTATAATCATCC
ATTTCGTCGAGTATTTGATTTAGATAGCGCATTCAACGAACGAGCAAGTC
CAAGAGCAAAATTATTCTCAGATTTATATGGATTACTTGACATGAATCAA
TCAACATTTCCTCACAGTCGTCTGTATAACTTTACTTTGGATGCTAGAGA
CAGAGAGCCGTATCCTATAGATAACCGATTATCCAAAACCAATTATCCAA
AATACACTGATGAAATGACAACAGCAACATTGATTCCAGTTGTCCATTTG
CCATCAAATAACAACTCAGATTATTCTACATCAACTAGAAAATCCACTTC
TTTCAATGATCCACCCAAAAGCAATTTATCCCAAGTTAGAAAAAATTCGG
AGGCTGAAGTAGACGCTCTAACAAATATCTTAATCAAAAGTATTGCAAAT
AAAACAGAAAACAAAGATTCAAATCCTCGAAGCTATACATCTTCTACTTA
TTTACCAAACCAGCCATATAGTAGCAAAAGAGTATCCAATACATCTAGTC
AGCCGGCAGTTTCAACTTCATCAAATTCAACAACAGGCTCTATAAGTCGC
CAGTCATCATTATCATCAAATGAATGCCATCGCTGTCGTAAACCGTTTGA
GTTGGCAAATGGCAAATCATCAGTTGGACAAATCAACGGACCATTGAATA
CAGTTTTCCACCAAACCTGTTTCAATTGTTACCGATGTGAAGCTAATTTA
AACGTAGATTCGTTTTTCTATGCCCAAAAACGGCTACTATGTTCAAGATG
TGTACATGAATCATTAGAAAAGTGTACTGTGTGTAATTTTATAATAAATG
ACAGGATAATAAGAGTTCTTGGCCATCCGTACCATCCAAAATGTTTTACT
TGCACCGTTTGCAACTGTTGCTTAGATGGGAAAGCGTTCACAGTGGATGT
CCATGAACGGATGTTTTGTCTGGAAGATTTTCATAAAAGATATGCACCGA
GATGTGATGCCTGTGGAGAACCAATTCGACCACAAAATGGTGGCCAAGAA
AATAAAAGAATAATTTCTGGTGATAAAACGTTCCATTTAGAATGTTCAGG
AATTACAATTAAAAACTGAATTTTACTAAAAAGAAATCGTGTAACTCATT
TGAACAAAACTTGAAAGTTCCGGTAAAATATCTCCGACTTTATTTGTAGT
TAATATTTATTTTATTGTGATTATTAAATTGTTACCATAATTTCCACATG
ACATCTTTTTTTCTATAATTTCTTATTTAAAAATTTTGACATGGGAATTT
ATTCTAGTCATAATTGATATTGTAGATTTAATCAAGGGTTTTTGACCT

protein sequence of SMED30019594-orf-1

>SMED30019594-orf-1 ID=SMED30019594-orf-1|Name=SMED30019594-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=362bp
MHYNHPFRRVFDLDSAFNERASPRAKLFSDLYGLLDMNQSTFPHSRLYNF
TLDARDREPYPIDNRLSKTNYPKYTDEMTTATLIPVVHLPSNNNSDYSTS
TRKSTSFNDPPKSNLSQVRKNSEAEVDALTNILIKSIANKTENKDSNPRS
YTSSTYLPNQPYSSKRVSNTSSQPAVSTSSNSTTGSISRQSSLSSNECHR
CRKPFELANGKSSVGQINGPLNTVFHQTCFNCYRCEANLNVDSFFYAQKR
LLCSRCVHESLEKCTVCNFIINDRIIRVLGHPYHPKCFTCTVCNCCLDGK
AFTVDVHERMFCLEDFHKRYAPRCDACGEPIRPQNGGQENKRIISGDKTF
HLECSGITIKN*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000101	muscle cell

Vocabulary: **INTERPRO**
Term	Definition
IPR001781	Znf_LIM

Vocabulary: **molecular function**
Term	Definition
GO:0008270	zinc ion binding
GO:0046872	metal ion binding

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 197..256 e-value: 2.3E-4 score: 30.5 coord: 263..315 e-value: 1.3E-11 score: 54.6
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 264..319 e-value: 2.0E-8 score: 34.4 coord: 198..259 e-value: 5.4E-8 score: 32.9
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 264..297
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 196..261 score: 8.465
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 262..322 score: 12.444
None	No IPR available	GENE3D	G3DSA:2.10.110.10		coord: 260..317 e-value: 4.4E-14 score: 54.2
None	No IPR available	GENE3D	G3DSA:2.10.110.10		coord: 318..356 e-value: 4.6E-5 score: 25.2
None	No IPR available	GENE3D	G3DSA:2.10.110.10		coord: 182..259 e-value: 8.0E-11 score: 43.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..195
None	No IPR available	PANTHER	PTHR24207:SF2	ZYX102 PROTEIN	coord: 88..354
None	No IPR available	PANTHER	PTHR24207	FAMILY NOT NAMED	coord: 88..354
None	No IPR available	CDD	cd08368	LIM	coord: 198..256 e-value: 2.53468E-5 score: 39.2231
None	No IPR available	SUPERFAMILY	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 232..294
None	No IPR available	SUPERFAMILY	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 290..355

Main menu

Lipoma-preferred partner

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 2

Owlery

blazegraph-runner