LIM domain-containing protein
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30019455 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 8
Homology
BLAST of LIM domain-containing protein vs. Ensembl Human
Match: LIMS4 (LIM zinc finger domain containing 4 [Source:HGNC Symbol;Acc:HGNC:39941]) HSP 1 Score: 245.358 bits (625), Expect = 5.398e-76 Identity = 131/321 (40.81%), Postives = 189/321 (58.88%), Query Frame = 1
Query: 325 LNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLA 1287
N + C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C E L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C +L + +E G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L K ++D KP+CK C +K+P ++RLA
Sbjct: 61 FNMANALASATCERCKGGFAPAETIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLIFKNDPYHPDHFNCANCGKDLTADAQELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKDKFVEIDLKPVCKHCYEKMPEEFKRRLA 378
BLAST of LIM domain-containing protein vs. Ensembl Human
Match: LIMS3 (LIM zinc finger domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30047]) HSP 1 Score: 245.358 bits (625), Expect = 5.398e-76 Identity = 131/321 (40.81%), Postives = 189/321 (58.88%), Query Frame = 1
Query: 325 LNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLA 1287
N + C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C E L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C +L + +E G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L K ++D KP+CK C +K+P ++RLA
Sbjct: 61 FNMANALASATCERCKGGFAPAETIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLIFKNDPYHPDHFNCANCGKDLTADAQELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKDKFVEIDLKPVCKHCYEKMPEEFKRRLA 378
BLAST of LIM domain-containing protein vs. Ensembl Human
Match: LIMS1 (LIM zinc finger domain containing 1 [Source:HGNC Symbol;Acc:HGNC:6616]) HSP 1 Score: 243.432 bits (620), Expect = 9.685e-76 Identity = 133/322 (41.30%), Postives = 188/322 (58.39%), Query Frame = 1
Query: 298 VNEVKDINLLNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
VN + + L N + C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C E L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 27 VNGLPEEELSNMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 345
BLAST of LIM domain-containing protein vs. Ensembl Human
Match: LIMS1 (LIM zinc finger domain containing 1 [Source:HGNC Symbol;Acc:HGNC:6616]) HSP 1 Score: 238.424 bits (607), Expect = 3.445e-74 Identity = 130/312 (41.67%), Postives = 183/312 (58.65%), Query Frame = 1
Query: 328 NRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
N + C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C E L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 12 NMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 320
BLAST of LIM domain-containing protein vs. Ensembl Human
Match: LIMS1 (LIM zinc finger domain containing 1 [Source:HGNC Symbol;Acc:HGNC:6616]) HSP 1 Score: 237.654 bits (605), Expect = 5.191e-74 Identity = 129/302 (42.72%), Postives = 181/302 (59.93%), Query Frame = 1
Query: 358 CCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C E L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 10 CERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 308
BLAST of LIM domain-containing protein vs. Ensembl Celegans
Match: unc-97 (LIM domain-containing protein unc-97 [Source:UniProtKB/Swiss-Prot;Acc:P50464]) HSP 1 Score: 253.062 bits (645), Expect = 3.964e-80 Identity = 135/313 (43.13%), Postives = 186/313 (59.42%), Query Frame = 1
Query: 349 NDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLA 1287
N +C C + F+ + + + +H +CFVCAQC E + F+ EGR YC HD+ +LF+P C +CN+FI+ GRVIKA++ SWH CF C C + L++ + R A C++C K G + C+KC I H+K G+ +HPYHFKCK C NEL RE +G+ YCLRC D MG+PIC C RP+EERVI A+GK +HVEHFVCS C KPFLG R++ +CE HF + C C E + L+K +C++ F C CD L+ +K Y+ D KP CK C + P L+KR++
Sbjct: 18 NMVCVRCNDGFSMQDQMVNSSGQVWHSECFVCAQCFEPFPDGIYFEYEGRKYCEHDFHVLFSPCCGKCNEFIV-GRVIKAMNASWHPGCFCCEICNKQLADVGFLRNAGR-ALCRECNEREKAAGHGRYVCHKCHAMIDDGQHIKFRGDSFHPYHFKCKRCNNELTTASREVNGELYCLRCHDTMGIPICGACHRPIEERVIAALGKHWHVEHFVCSVCEKPFLGHRHYERKGLPYCEQHFHKLFGNLCFKCGDPCCGEVFQALQKTWCVKCFSCSFCDKKLDQKTKFYEFDMKPTCKRCYDRFPTELKKRIS 328
BLAST of LIM domain-containing protein vs. Ensembl Celegans
Match: unc-97 (LIM domain-containing protein unc-97 [Source:UniProtKB/Swiss-Prot;Acc:P50464]) HSP 1 Score: 253.062 bits (645), Expect = 3.964e-80 Identity = 135/313 (43.13%), Postives = 186/313 (59.42%), Query Frame = 1
Query: 349 NDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLA 1287
N +C C + F+ + + + +H +CFVCAQC E + F+ EGR YC HD+ +LF+P C +CN+FI+ GRVIKA++ SWH CF C C + L++ + R A C++C K G + C+KC I H+K G+ +HPYHFKCK C NEL RE +G+ YCLRC D MG+PIC C RP+EERVI A+GK +HVEHFVCS C KPFLG R++ +CE HF + C C E + L+K +C++ F C CD L+ +K Y+ D KP CK C + P L+KR++
Sbjct: 18 NMVCVRCNDGFSMQDQMVNSSGQVWHSECFVCAQCFEPFPDGIYFEYEGRKYCEHDFHVLFSPCCGKCNEFIV-GRVIKAMNASWHPGCFCCEICNKQLADVGFLRNAGR-ALCRECNEREKAAGHGRYVCHKCHAMIDDGQHIKFRGDSFHPYHFKCKRCNNELTTASREVNGELYCLRCHDTMGIPICGACHRPIEERVIAALGKHWHVEHFVCSVCEKPFLGHRHYERKGLPYCEQHFHKLFGNLCFKCGDPCCGEVFQALQKTWCVKCFSCSFCDKKLDQKTKFYEFDMKPTCKRCYDRFPTELKKRIS 328
BLAST of LIM domain-containing protein vs. Ensembl Celegans
Match: pin-2 (LIM domain-containing protein pin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q19157]) HSP 1 Score: 175.637 bits (444), Expect = 1.332e-50 Identity = 105/310 (33.87%), Postives = 165/310 (53.23%), Query Frame = 1
Query: 331 RQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKR---PVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCL 1251
R + C C E F E L + +H +CF+CAQC++ L FQ E R+YC HD+K L+AP C +CN+F++ G+V+ + ++S+H +CF C C L++ ++ ++ C C N K ++ ++ C KCK + L + YH YHFKC TC L+ + R D +C RCFD +C CK+ P E+ I+ M K +H +HF C+ C++PF G ++ N + +C F + C C R+VG V K +C + +RC CD +L+ K+ ++D P+CK CL
Sbjct: 12 RNSGKRHRACERCREQFELNEPYFLLGASSWHMRCFLCAQCMDPLVGTTYFQFENRIYCEHDFKTLYAPVCAKCNEFVI-GQVVHSSNNSYHLACFTCDECNVHLNSQIAYR-YQGTILCFLC-NQKKPKMR-IYNCNKCKQHVDNSDLLTYQENPYHAYHFKCTTCKKVLESDARTIKDDLFCPRCFD-FKCEVCFDCKKVIDPQVEQSIFTMNKHWHTDHFRCATCARPFFGHEHYEKNGKAYCRDDFLELIGHHCFICDRNVGGGMVHVFGKAFCPECYRCRGCDKVLHYKDKVMELDLMPLCKKCL 316
BLAST of LIM domain-containing protein vs. Ensembl Celegans
Match: pxl-1 (Paxillin homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q09476]) HSP 1 Score: 99.7525 bits (247), Expect = 9.000e-23 Identity = 68/276 (24.64%), Postives = 105/276 (38.04%), Query Frame = 1
Query: 421 FHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPC 1248
+H + + C +C EL F+ GR +C DY F+P C C++ I + R + ++ ++H CF C +C P DG F EK+G YC R F ++ P C+ C +P+ I A+G +H + FVC C F G+ +F HN CE H+ C C + V + + + +HFRC C+ L + +VDR+P C C
Sbjct: 134 WHPEHYTCCECGAELGQRPFFERNGRAFCEEDYHNQFSPKCQGCHRAITD-RCVSVMNKNFHIECFT---------------------------------------CAECNQPFGEDG--------------------------FHEKNGQTYCKRDFFRLFAPKCNGCSQPITSNFITALGTHWHPDCFVCQHCGVSFNGASFFEHNGAPLCERHYHESRGSICSQCRGAINGRCVAAMGRKFHPEHFRCSYCNHQLTKGT-FKEVDRRPFCHKC 342 HSP 2 Score: 72.0182 bits (175), Expect = 1.597e-13 Identity = 54/184 (29.35%), Postives = 89/184 (48.37%), Query Frame = 1
Query: 358 CCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGH-LKSEGEFYHPYHFKCKTCLNELDRN-FREKDGDFYCLRCFDKM 903
C C A + C + N N FH +CF CA+C + + + G+ YC D+ LFAP C+ C+Q I I A+ WH CF N ++F + C++ Y++ + I C +C+G I +G + + G +HP HF+C C ++L + F+E D +C +C++
Sbjct: 174 CQGCHRAITD-RCVSVMNKN-FHIECFTCAECNQPFGEDGFHEKNGQTYCKRDFFRLFAPKCNGCSQPITS-NFITALGTHWHPDCF-VCQHCGVSFNGASFFEHNGAPLCERHYHESRGSI-----CSQCRGAI--NGRCVAAMGRKFHPEHFRCSYCNHQLTKGTFKEVDRRPFCHKCYNNT 346
BLAST of LIM domain-containing protein vs. Ensembl Celegans
Match: pxl-1 (Paxillin homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q09476]) HSP 1 Score: 98.9821 bits (245), Expect = 3.072e-22 Identity = 68/276 (24.64%), Postives = 105/276 (38.04%), Query Frame = 1
Query: 421 FHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPC 1248
+H + + C +C EL F+ GR +C DY F+P C C++ I + R + ++ ++H CF C +C P DG F EK+G YC R F ++ P C+ C +P+ I A+G +H + FVC C F G+ +F HN CE H+ C C + V + + + +HFRC C+ L + +VDR+P C C
Sbjct: 195 WHPEHYTCCECGAELGQRPFFERNGRAFCEEDYHNQFSPKCQGCHRAITD-RCVSVMNKNFHIECFT---------------------------------------CAECNQPFGEDG--------------------------FHEKNGQTYCKRDFFRLFAPKCNGCSQPITSNFITALGTHWHPDCFVCQHCGVSFNGASFFEHNGAPLCERHYHESRGSICSQCRGAINGRCVAAMGRKFHPEHFRCSYCNHQLTKGT-FKEVDRRPFCHKC 403 HSP 2 Score: 71.633 bits (174), Expect = 2.672e-13 Identity = 54/184 (29.35%), Postives = 89/184 (48.37%), Query Frame = 1
Query: 358 CCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGH-LKSEGEFYHPYHFKCKTCLNELDRN-FREKDGDFYCLRCFDKM 903
C C A + C + N N FH +CF CA+C + + + G+ YC D+ LFAP C+ C+Q I I A+ WH CF N ++F + C++ Y++ + I C +C+G I +G + + G +HP HF+C C ++L + F+E D +C +C++
Sbjct: 235 CQGCHRAITD-RCVSVMNKN-FHIECFTCAECNQPFGEDGFHEKNGQTYCKRDFFRLFAPKCNGCSQPITS-NFITALGTHWHPDCF-VCQHCGVSFNGASFFEHNGAPLCERHYHESRGSI-----CSQCRGAI--NGRCVAAMGRKFHPEHFRCSYCNHQLTKGTFKEVDRRPFCHKCYNNT 407
BLAST of LIM domain-containing protein vs. Ensembl Fly
Match: stck (gene:FBgn0020249 transcript:FBtr0081846) HSP 1 Score: 255.373 bits (651), Expect = 6.272e-81 Identity = 133/324 (41.05%), Postives = 186/324 (57.41%), Query Frame = 1
Query: 358 CCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDG----------DFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLAALHK 1299
C C + F E + N +H +CFVCAQC + + ++ EGR YC D+ +LFAP C++C +F++ GRVIKA+ SWH CF C C + L++ F K + A C +C VK I G + C KC G ++ + L+ GE YH YHF C C ELD RE + YCLRC DKMG+PIC C+RP+EERV+ A+GK +HVEHFVC+ C KPFLG R++ +CE H+ + C C++ +G + L K +C+ HF C CD+ + SK Y+ D KP+CK C + P+ LR+RL H+
Sbjct: 21 CTRCADGFEPTEKIVNSNGELWHTQCFVCAQCFRPFQDGIFYEFEGRKYCERDFHVLFAPCCNKCGEFVI-GRVIKAMSASWHPQCFRCQLCAKELADC-GFIKNQNRALCHECNAKVKAEITGRYVCQKCHG-LIDEEPLRFRGEVYHGYHFSCTACGTELDSTAREVKSRPGLAANDMNELYCLRCHDKMGIPICGACRRPIEERVVTALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVIGGDVFTALNKAWCVHHFACSVCDTKMTQKSKFYEYDEKPVCKKCYDRFPNELRRRLRTAHE 341
BLAST of LIM domain-containing protein vs. Ensembl Fly
Match: stck (gene:FBgn0020249 transcript:FBtr0306260) HSP 1 Score: 254.988 bits (650), Expect = 7.134e-81 Identity = 133/324 (41.05%), Postives = 186/324 (57.41%), Query Frame = 1
Query: 358 CCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDG----------DFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLAALHK 1299
C C + F E + N +H +CFVCAQC + + ++ EGR YC D+ +LFAP C++C +F++ GRVIKA+ SWH CF C C + L++ F K + A C +C VK I G + C KC G ++ + L+ GE YH YHF C C ELD RE + YCLRC DKMG+PIC C+RP+EERV+ A+GK +HVEHFVC+ C KPFLG R++ +CE H+ + C C++ +G + L K +C+ HF C CD+ + SK Y+ D KP+CK C + P+ LR+RL H+
Sbjct: 8 CTRCADGFEPTEKIVNSNGELWHTQCFVCAQCFRPFQDGIFYEFEGRKYCERDFHVLFAPCCNKCGEFVI-GRVIKAMSASWHPQCFRCQLCAKELADC-GFIKNQNRALCHECNAKVKAEITGRYVCQKCHG-LIDEEPLRFRGEVYHGYHFSCTACGTELDSTAREVKSRPGLAANDMNELYCLRCHDKMGIPICGACRRPIEERVVTALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVIGGDVFTALNKAWCVHHFACSVCDTKMTQKSKFYEYDEKPVCKKCYDRFPNELRRRLRTAHE 328
BLAST of LIM domain-containing protein vs. Ensembl Fly
Match: stck (gene:FBgn0020249 transcript:FBtr0081844) HSP 1 Score: 254.988 bits (650), Expect = 7.134e-81 Identity = 133/324 (41.05%), Postives = 186/324 (57.41%), Query Frame = 1
Query: 358 CCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDG----------DFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLAALHK 1299
C C + F E + N +H +CFVCAQC + + ++ EGR YC D+ +LFAP C++C +F++ GRVIKA+ SWH CF C C + L++ F K + A C +C VK I G + C KC G ++ + L+ GE YH YHF C C ELD RE + YCLRC DKMG+PIC C+RP+EERV+ A+GK +HVEHFVC+ C KPFLG R++ +CE H+ + C C++ +G + L K +C+ HF C CD+ + SK Y+ D KP+CK C + P+ LR+RL H+
Sbjct: 8 CTRCADGFEPTEKIVNSNGELWHTQCFVCAQCFRPFQDGIFYEFEGRKYCERDFHVLFAPCCNKCGEFVI-GRVIKAMSASWHPQCFRCQLCAKELADC-GFIKNQNRALCHECNAKVKAEITGRYVCQKCHG-LIDEEPLRFRGEVYHGYHFSCTACGTELDSTAREVKSRPGLAANDMNELYCLRCHDKMGIPICGACRRPIEERVVTALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVIGGDVFTALNKAWCVHHFACSVCDTKMTQKSKFYEYDEKPVCKKCYDRFPNELRRRLRTAHE 328
BLAST of LIM domain-containing protein vs. Ensembl Fly
Match: stck (gene:FBgn0020249 transcript:FBtr0081845) HSP 1 Score: 254.988 bits (650), Expect = 8.158e-81 Identity = 133/324 (41.05%), Postives = 186/324 (57.41%), Query Frame = 1
Query: 358 CCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDG----------DFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLAALHK 1299
C C + F E + N +H +CFVCAQC + + ++ EGR YC D+ +LFAP C++C +F++ GRVIKA+ SWH CF C C + L++ F K + A C +C VK I G + C KC G ++ + L+ GE YH YHF C C ELD RE + YCLRC DKMG+PIC C+RP+EERV+ A+GK +HVEHFVC+ C KPFLG R++ +CE H+ + C C++ +G + L K +C+ HF C CD+ + SK Y+ D KP+CK C + P+ LR+RL H+
Sbjct: 18 CTRCADGFEPTEKIVNSNGELWHTQCFVCAQCFRPFQDGIFYEFEGRKYCERDFHVLFAPCCNKCGEFVI-GRVIKAMSASWHPQCFRCQLCAKELADC-GFIKNQNRALCHECNAKVKAEITGRYVCQKCHG-LIDEEPLRFRGEVYHGYHFSCTACGTELDSTAREVKSRPGLAANDMNELYCLRCHDKMGIPICGACRRPIEERVVTALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVIGGDVFTALNKAWCVHHFACSVCDTKMTQKSKFYEYDEKPVCKKCYDRFPNELRRRLRTAHE 338
BLAST of LIM domain-containing protein vs. Ensembl Fly
Match: CG34325 (gene:FBgn0085354 transcript:FBtr0112527) HSP 1 Score: 86.2705 bits (212), Expect = 2.234e-19 Identity = 55/172 (31.98%), Postives = 86/172 (50.00%), Query Frame = 1
Query: 739 CYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNEL-DRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVC-SFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPC 1248
C+KC I L + + G+ +HP HF CK C + + +F DG C CF IC CKRP+ ER I AMG+ +H E F+C C + GS ++ H+ +C F+ M C C + + ++ L + + F+C C + + SS + + D +P+CK C
Sbjct: 8 CHKCNEVIQLR-IITALGKTWHPEHFVCKDCQCPITEASFNINDGQPVCSACFVSNYSGICHGCKRPILERTIKAMGETWHEECFLCRGPCMQQLAGSSFYEHDGLPYCRTDFEHMFAARCGNCKAPITENAIVALDAKWHRECFKCKKCKTPITASSFVVE-DNQPLCKAC 177 HSP 2 Score: 73.559 bits (179), Expect = 6.102e-15 Identity = 53/176 (30.11%), Postives = 86/176 (48.86%), Query Frame = 1
Query: 541 CHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCK-TCLNEL-DRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCE 1062
CH+CN+ +++ R+I A+ +WH F C C ++ + +F + C C+ + I C+ CK PI L+ +K+ GE +H F C+ C+ +L +F E DG YC F+ M C CK P+ E I A+ +H E F C C P S + + + + C+
Sbjct: 8 CHKCNE-VIQLRIITALGKTWHPEHFVCKDCQCPITEA-SFNINDGQPVCSACFVSNYSGI-----CHGCKRPI-LERTIKAMGETWHEECFLCRGPCMQQLAGSSFYEHDGLPYCRTDFEHMFAARCGNCKAPITENAIVALDAKWHRECFKCKKCKTPITASSFVVEDNQPLCK 175 HSP 3 Score: 53.1434 bits (126), Expect = 6.704e-8 Identity = 31/113 (27.43%), Postives = 51/113 (45.13%), Query Frame = 1
Query: 913 ICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLND---SSKIYKVDRKPICK 1242
IC C ++ R+I A+GK +H EHFVC C P + + I++ + C F C C R + + +++ + + + H CF C S Y+ D P C+
Sbjct: 7 ICHKCNEVIQLRIITALGKTWHPEHFVCKDCQCPITEASFNINDGQPVCSACFVSNYSGICHGCKRPILERTIKAMGETW---HEECFLCRGPCMQQLAGSSFYEHDGLPYCR 116 HSP 4 Score: 48.9062 bits (115), Expect = 1.613e-6 Identity = 45/167 (26.95%), Postives = 70/167 (41.92%), Query Frame = 1
Query: 400 ILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELD-RNFREKDGDFYCLRCFD 897
I +H + FVC C + N+G+ C + ++ CH C + ILE R IKA+ +WH CF C S+F + + YC+ D ++ C CK PI + + + + +H FKCK C + +F +D C C D
Sbjct: 20 ITALGKTWHPEHFVCKDCQCPITEASFNINDGQPVCSACFVSNYSGICHGCKRPILE-RTIKAMGETWHEECFLCRGPCMQQLAGSSFYEHDGLPYCR---TDFEHMFAA--RCGNCKAPITENAIVALDAK-WHRECFKCKKCKTPITASSFVVEDNQPLCKACSD 179 HSP 5 Score: 47.7506 bits (112), Expect = 4.774e-6 Identity = 26/94 (27.66%), Postives = 49/94 (52.13%), Query Frame = 1
Query: 340 ESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVC-AQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCF 618
+++ +C C+ E K + +H++CF+C C+++L ++++G YC D++ +FA C C I E ++ A+D WH CF
Sbjct: 61 SNYSGICHGCKRPILERTIKAM--GETWHEECFLCRGPCMQQLAGSSFYEHDGLPYCRTDFEHMFAARCGNCKAPITENAIV-ALDAKWHRECF 151
BLAST of LIM domain-containing protein vs. Ensembl Zebrafish
Match: lims2 (LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]) HSP 1 Score: 243.817 bits (621), Expect = 1.802e-76 Identity = 132/323 (40.87%), Postives = 190/323 (58.82%), Query Frame = 1
Query: 349 NDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLAALHKSE*QRQ 1317
N +C C+ +F+ E + N +H++CF CAQC ++L L ++ EGR YC HD+++LFAP CH+C +F++ GRVIKA++ SWH CF C C L++ F K C+ C++ K G H C KC V++ L + YHP HF C C EL + RE G+ YCL C DK+GVPIC C+RPVE RV+ AMGK +HVEHFVC C KPFLG R++ +CE H+ + C C+R + + V L K +C++ F C C S L K ++D KP+CK C +++P L++RL+ +S +R+
Sbjct: 9 NAVCERCKSSFSPTEKMVNSNGELYHEQCFTCAQCFQQLIQGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFVV-GRVIKAMNSSWHPDCFCCEVCEAVLADV-GFVKSGGRPLCRSCHSRQKALSLGKHVCQKCL--CVVEEPLMYRSDPYHPDHFNCSHCGKELTADARELKGELYCLPCHDKLGVPICGACRRPVEGRVVNAMGKQWHVEHFVCVKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFQCNRVIEGDVVSALNKAWCVRCFSCSTCTSRLTLKDKFVEIDLKPVCKHCYERMPDELKRRLSREQESRDKRK 327
BLAST of LIM domain-containing protein vs. Ensembl Zebrafish
Match: lims1 (LIM and senescent cell antigen-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-050522-236]) HSP 1 Score: 243.432 bits (620), Expect = 3.028e-76 Identity = 133/325 (40.92%), Postives = 189/325 (58.15%), Query Frame = 1
Query: 289 LQNVNEVKDINLLNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
+ V+E+ N+ N N C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 1 MLGVSEMTGSNMANALA---NASCERCKSGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPDCFCCDICQAVLADVGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIEEQPLIFKNDPYHPDHFNCSNCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCYHCNRVIEGDVVSALNKAWCVNCFSCSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 319
BLAST of LIM domain-containing protein vs. Ensembl Zebrafish
Match: lims2 (LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]) HSP 1 Score: 244.202 bits (622), Expect = 3.971e-76 Identity = 132/323 (40.87%), Postives = 190/323 (58.82%), Query Frame = 1
Query: 349 NDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLAALHKSE*QRQ 1317
N +C C+ +F+ E + N +H++CF CAQC ++L L ++ EGR YC HD+++LFAP CH+C +F++ GRVIKA++ SWH CF C C L++ F K C+ C++ K G H C KC V++ L + YHP HF C C EL + RE G+ YCL C DK+GVPIC C+RPVE RV+ AMGK +HVEHFVC C KPFLG R++ +CE H+ + C C+R + + V L K +C++ F C C S L K ++D KP+CK C +++P L++RL+ +S +R+
Sbjct: 53 NAVCERCKSSFSPTEKMVNSNGELYHEQCFTCAQCFQQLIQGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFVV-GRVIKAMNSSWHPDCFCCEVCEAVLADV-GFVKSGGRPLCRSCHSRQKALSLGKHVCQKCL--CVVEEPLMYRSDPYHPDHFNCSHCGKELTADARELKGELYCLPCHDKLGVPICGACRRPVEGRVVNAMGKQWHVEHFVCVKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFQCNRVIEGDVVSALNKAWCVRCFSCSTCTSRLTLKDKFVEIDLKPVCKHCYERMPDELKRRLSREQESRDKRK 371
BLAST of LIM domain-containing protein vs. Ensembl Zebrafish
Match: lims1 (LIM and senescent cell antigen-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-050522-236]) HSP 1 Score: 240.35 bits (612), Expect = 3.030e-75 Identity = 129/305 (42.30%), Postives = 181/305 (59.34%), Query Frame = 1
Query: 349 NDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
N C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 7 NASCERCKSGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPDCFCCDICQAVLADVGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIEEQPLIFKNDPYHPDHFNCSNCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCYHCNRVIEGDVVSALNKAWCVNCFSCSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 308
BLAST of LIM domain-containing protein vs. Ensembl Zebrafish
Match: pxna (paxillin a [Source:NCBI gene;Acc:399546]) HSP 1 Score: 110.923 bits (276), Expect = 2.697e-27 Identity = 78/254 (30.71%), Postives = 127/254 (50.00%), Query Frame = 1
Query: 310 KDINLLNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKG--PIVLDGHLKSEGEFYHPYHFKCKTCLNE-LDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCE 1062
D+N L Q + +C C++ G+ + +H + FVC QC EE+ F+ +G+ YC DY LF+P C+ C+ IL+ +V+ A+D +WH F + S F + E AYC+K Y D+ + KC G +L+ ++ + +HP F C+ C ++ +F E +G YC + + +CS C++P+ R I AMGK +H EHFVC+FC K + N + +C+
Sbjct: 7 SDLNRLGVQTVA-KGVCGACKKPI-AGQV-VTAMGRTWHPEHFVCTQCQEEIGSRNFFERDGQPYCEKDYHSLFSPRCYYCSGPILD-KVVTALDKTWHPEHF-FCAQCGSFFGPEGFHEKEGKAYCRKDYFDM--------FAPKCGGCARAILENYISALNSLWHPECFVCRECFTPFVNGSFFEHEGQPYCEAHYHERRGSLCSGCQKPITGRCITAMGKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQ 247 HSP 2 Score: 102.449 bits (254), Expect = 3.034e-24 Identity = 70/233 (30.04%), Postives = 112/233 (48.07%), Query Frame = 1
Query: 565 LEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELD-RNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKL 1260
+ G+V+ A+ +WH F C+ C E + + + F++ + YC+K Y+ + + CY C GPI LD + + + +HP HF C C + F EK+G YC + + M P C C R + E I A+ +H E FVC C PF+ +F H + +CE H+ C C + + + + K + +HF C C LN + + + KP C+ C KL
Sbjct: 29 IAGQVVTAMGRTWHPEHFVCTQCQEEIGSRNFFER-DGQPYCEKDYHSLFSP-----RCYYCSGPI-LDKVVTALDKTWHPEHFFCAQCGSFFGPEGFHEKEGKAYCRKDYFDMFAPKCGGCARAILENYISALNSLWHPECFVCRECFTPFVNGSFFEHEGQPYCEAHYHERRGSLCSGCQKPITGRCITAMGKKFHPEHFVCAFCLKQLNKGT-FKEQNDKPYCQSCFVKL 253 HSP 3 Score: 64.6994 bits (156), Expect = 3.246e-11 Identity = 29/95 (30.53%), Postives = 48/95 (50.53%), Query Frame = 1
Query: 913 ICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLN 1197
+C CK+P+ +V+ AMG+ +H EHFVC+ C + +F + + +CE + + C YC + + V L K + +HF C C S
Sbjct: 21 VCGACKKPIAGQVVTAMGRTWHPEHFVCTQCQEEIGSRNFFERDGQPYCEKDYHSLFSPRCYYCSGPILDKVVTALDKTWHPEHFFCAQCGSFFG 115
BLAST of LIM domain-containing protein vs. Ensembl Xenopus
Match: lims1 (LIM-type zinc finger domains 1 [Source:NCBI gene;Acc:100216119]) HSP 1 Score: 247.284 bits (630), Expect = 7.818e-77 Identity = 133/321 (41.43%), Postives = 188/321 (58.57%), Query Frame = 1
Query: 325 LNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLA 1287
N N +C C F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C + L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L K ++D KP CK C +KLP ++RL+
Sbjct: 62 FNMANALANAICERCRSGFAPSEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPECFRCDICQQVLADIGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKHKFVEIDLKPTCKHCYEKLPDEFKRRLS 379
BLAST of LIM domain-containing protein vs. Ensembl Xenopus
Match: lims1 (LIM-type zinc finger domains 1 [Source:NCBI gene;Acc:100216119]) HSP 1 Score: 244.588 bits (623), Expect = 2.979e-76 Identity = 132/323 (40.87%), Postives = 187/323 (57.89%), Query Frame = 1
Query: 295 NVNEVKDINLLNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
+N + L N N +C C F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C + L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 26 GLNGIHADKLSNMANALANAICERCRSGFAPSEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPECFRCDICQQVLADIGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 345
BLAST of LIM domain-containing protein vs. Ensembl Xenopus
Match: lims1 (LIM-type zinc finger domains 1 [Source:NCBI gene;Acc:100216119]) HSP 1 Score: 241.121 bits (614), Expect = 2.874e-75 Identity = 130/313 (41.53%), Postives = 184/313 (58.79%), Query Frame = 1
Query: 325 LNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
+N N +C C F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C + L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 10 INMANALANAICERCRSGFAPSEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPECFRCDICQQVLADIGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 319
BLAST of LIM domain-containing protein vs. Ensembl Xenopus
Match: lims1 (LIM-type zinc finger domains 1 [Source:NCBI gene;Acc:100216119]) HSP 1 Score: 240.35 bits (612), Expect = 6.872e-75 Identity = 130/312 (41.67%), Postives = 183/312 (58.65%), Query Frame = 1
Query: 328 NRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
N N +C C F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C + L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 14 NMANALANAICERCRSGFAPSEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPECFRCDICQQVLADIGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 322
BLAST of LIM domain-containing protein vs. Ensembl Xenopus
Match: lims1 (LIM-type zinc finger domains 1 [Source:NCBI gene;Acc:100216119]) HSP 1 Score: 240.35 bits (612), Expect = 6.931e-75 Identity = 130/312 (41.67%), Postives = 183/312 (58.65%), Query Frame = 1
Query: 328 NRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
N N +C C F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C + L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 15 NMANALANAICERCRSGFAPSEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPECFRCDICQQVLADIGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 323
BLAST of LIM domain-containing protein vs. Ensembl Mouse
Match: Lims1 (LIM and senescent cell antigen-like domains 1 [Source:MGI Symbol;Acc:MGI:1195263]) HSP 1 Score: 246.514 bits (628), Expect = 1.014e-76 Identity = 133/321 (41.43%), Postives = 189/321 (58.88%), Query Frame = 1
Query: 325 LNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLA 1287
N + C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C E L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L K ++D KP+CK C +K+P ++RLA
Sbjct: 61 FNMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVSCFACSTCNTKLTLKDKFVEIDLKPVCKYCYEKMPEEFKRRLA 378
BLAST of LIM domain-containing protein vs. Ensembl Mouse
Match: Lims1 (LIM and senescent cell antigen-like domains 1 [Source:MGI Symbol;Acc:MGI:1195263]) HSP 1 Score: 241.891 bits (616), Expect = 2.788e-75 Identity = 133/322 (41.30%), Postives = 187/322 (58.07%), Query Frame = 1
Query: 298 VNEVKDINLLNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
VN + L N + C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C E L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 27 VNGHAEEELSNMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVSCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 345
BLAST of LIM domain-containing protein vs. Ensembl Mouse
Match: Lims1 (LIM and senescent cell antigen-like domains 1 [Source:MGI Symbol;Acc:MGI:1195263]) HSP 1 Score: 238.81 bits (608), Expect = 1.715e-74 Identity = 130/312 (41.67%), Postives = 183/312 (58.65%), Query Frame = 1
Query: 328 NRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
N + C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C E L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 12 NMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVSCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 320
BLAST of LIM domain-containing protein vs. Ensembl Mouse
Match: Lims1 (LIM and senescent cell antigen-like domains 1 [Source:MGI Symbol;Acc:MGI:1195263]) HSP 1 Score: 238.81 bits (608), Expect = 7.215e-74 Identity = 130/313 (41.53%), Postives = 183/313 (58.47%), Query Frame = 1
Query: 325 LNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
N + C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C E L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 61 FNMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVSCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 370
BLAST of LIM domain-containing protein vs. Ensembl Mouse
Match: Lims2 (LIM and senescent cell antigen like domains 2 [Source:MGI Symbol;Acc:MGI:2385067]) HSP 1 Score: 216.468 bits (550), Expect = 8.688e-66 Identity = 119/305 (39.02%), Postives = 170/305 (55.74%), Query Frame = 1
Query: 349 NDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
+ +C C+ F E + N +H+ CFVCAQC L ++ EGR YC HD+++LFAP C C +F++ GRVIKA++ +WH CF C C L++ K R+ C+ C+N K + G C +C I + L + + YHP HF C C EL + RE G+ YCL C DKMG+PIC C+RP+E RV+ A+GK +HVEHFVC+ C KPFLG R++ +CE H+ + C C + + V L K +C+ F C C+ L +K + D KP+CK C ++ P
Sbjct: 12 DAMCQRCQARFAPTERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGFCGEFVI-GRVIKAMNANWHPGCFRCELCDVELADLGFVKNAGRH-LCRPCHNREKAKGLGKFICQRCHLAID-EQPLMFKNDPYHPDHFSCSNCGKELTSDARELKGELYCLPCHDKMGIPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALSKAWCVNCFSCSTCNMKLTLKNKFVEFDMKPVCKRCYERFP 313
BLAST of LIM domain-containing protein vs. UniProt/SwissProt
Match: sp|P50464|UNC97_CAEEL (LIM domain-containing protein unc-97 OS=Caenorhabditis elegans OX=6239 GN=unc-97 PE=1 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 5.043e-79 Identity = 135/313 (43.13%), Postives = 186/313 (59.42%), Query Frame = 1
Query: 349 NDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLA 1287
N +C C + F+ + + + +H +CFVCAQC E + F+ EGR YC HD+ +LF+P C +CN+FI+ GRVIKA++ SWH CF C C + L++ + R A C++C K G + C+KC I H+K G+ +HPYHFKCK C NEL RE +G+ YCLRC D MG+PIC C RP+EERVI A+GK +HVEHFVCS C KPFLG R++ +CE HF + C C E + L+K +C++ F C CD L+ +K Y+ D KP CK C + P L+KR++
Sbjct: 18 NMVCVRCNDGFSMQDQMVNSSGQVWHSECFVCAQCFEPFPDGIYFEYEGRKYCEHDFHVLFSPCCGKCNEFIV-GRVIKAMNASWHPGCFCCEICNKQLADVGFLRNAGR-ALCRECNEREKAAGHGRYVCHKCHAMIDDGQHIKFRGDSFHPYHFKCKRCNNELTTASREVNGELYCLRCHDTMGIPICGACHRPIEERVIAALGKHWHVEHFVCSVCEKPFLGHRHYERKGLPYCEQHFHKLFGNLCFKCGDPCCGEVFQALQKTWCVKCFSCSFCDKKLDQKTKFYEFDMKPTCKRCYDRFPTELKKRIS 328
BLAST of LIM domain-containing protein vs. UniProt/SwissProt
Match: sp|Q99JW4|LIMS1_MOUSE (LIM and senescent cell antigen-like-containing domain protein 1 OS=Mus musculus OX=10090 GN=Lims1 PE=1 SV=3) HSP 1 Score: 237.654 bits (605), Expect = 2.264e-73 Identity = 129/302 (42.72%), Postives = 181/302 (59.93%), Query Frame = 1
Query: 358 CCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C E L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 10 CERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVSCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 308
BLAST of LIM domain-containing protein vs. UniProt/SwissProt
Match: sp|P48059|LIMS1_HUMAN (LIM and senescent cell antigen-like-containing domain protein 1 OS=Homo sapiens OX=9606 GN=LIMS1 PE=1 SV=4) HSP 1 Score: 237.654 bits (605), Expect = 2.493e-73 Identity = 129/302 (42.72%), Postives = 181/302 (59.93%), Query Frame = 1
Query: 358 CCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C E L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 10 CERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 308
BLAST of LIM domain-containing protein vs. UniProt/SwissProt
Match: sp|Q2KJ33|LIMS2_BOVIN (LIM and senescent cell antigen-like-containing domain protein 2 OS=Bos taurus OX=9913 GN=LIMS2 PE=2 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 1.196e-68 Identity = 126/313 (40.26%), Postives = 175/313 (55.91%), Query Frame = 1
Query: 328 NRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGH-LKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
N N +C C+ F E + N +H+ CFVCAQC L ++ EGR YC HD+++LFAP C C +FI+ GRVIKA++++WH CF C C L++ K R+ C+ C+N K + G + C +C +V+D L + + YHP HF C C EL RE G+ YCL C DKMGVPIC C+RP+E RV+ A+GK +HVEHFVC+ C KPFLG R++ +CE H+ + C C + + V L K +C+ F C C+S L +K + D KP+CK C +K P
Sbjct: 5 NMSNALANAVCQRCQARFAPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFII-GRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRH-LCRPCHNREKAKGLGKYICQRCH--LVIDEQPLMFKNDAYHPDHFSCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYTCSHVIEGDVVSALNKAWCVHCFSCSTCNSRLTLKNKFVEFDMKPVCKRCYEKFP 313
BLAST of LIM domain-containing protein vs. UniProt/SwissProt
Match: sp|Q7Z4I7|LIMS2_HUMAN (LIM and senescent cell antigen-like-containing domain protein 2 OS=Homo sapiens OX=9606 GN=LIMS2 PE=1 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.248e-68 Identity = 126/313 (40.26%), Postives = 175/313 (55.91%), Query Frame = 1
Query: 328 NRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGH-LKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
N N +C C+ F+ E + N +H+ CFVCAQC L ++ EGR YC HD+++LFAP C C +FI+ GRVIKA++++WH CF C C L++ K R+ C+ C+N K + G + C +C +V+D L + YHP HF C C EL RE G+ YCL C DKMGVPIC C+RP+E RV+ A+GK +HVEHFVC+ C KPFLG R++ +CE H+ + C C + + V L K +C+ F C C+S L +K + D KP+CK C +K P
Sbjct: 5 NMSDALANAVCQRCQARFSPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFII-GRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRH-LCRPCHNREKAKGLGKYICQRCH--LVIDEQPLMFRSDAYHPDHFNCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVSCFSCSTCNSKLTLKNKFVEFDMKPVCKRCYEKFP 313
BLAST of LIM domain-containing protein vs. TrEMBL
Match: A0A0R3U6W0 (LIM domain-containing protein OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS2543 PE=4 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 3.328e-88 Identity = 149/347 (42.94%), Postives = 206/347 (59.37%), Query Frame = 1
Query: 265 QFRMTTTVLQNVNEVKDINLLNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLAALHKSE 1305
Q + ++ + I+ L+R E +D C HC E F E + N ++H CFVCAQC + + + +GR YC HD+ +LFAP C +C FI+ GRVIKA++ SWH CF C C + LS+ F K A C +C K G C+KC + LK + E YH YHF C +C +EL + REKDGD YCLRCFDKMG+PIC C+RP+EERV++A+GK +HVEHFVC+ C KPFLGSR++ +CELH+Q + C C++ + E+V L K +C+ HF C CD ++ +K Y+ D +P+CK C + P LRKR+A +HK E
Sbjct: 15 QHDIPEVDVEGYEQFAPIDELSRL-EVGDDYCLHCHEGFQMNEKVVQARNEKYHVGCFVCAQCFQPFPDGVYYDFDGRKYCEHDFHVLFAPCCGKCGYFIV-GRVIKAMNSSWHPECFRCQICSKCLSDD-GFVKHAGRALCHECNAREKANSSGRILCFKCHSYVDEGQQLKYQSEVYHAYHFTCSSCGSELSSDAREKDGDLYCLRCFDKMGIPICGACRRPIEERVVHALGKTWHVEHFVCARCEKPFLGSRHYEKKGLAYCELHYQQLFGMLCYSCNQVIPGETVFALNKAWCVDHFGCIVCDRRISPKTKFYEFDLRPVCKSCYEMFPIELRKRIAKMHKLE 358
BLAST of LIM domain-containing protein vs. TrEMBL
Match: A0A0R3TVL8 (LIM domain-containing protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS11860 PE=4 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 3.954e-88 Identity = 145/322 (45.03%), Postives = 197/322 (61.18%), Query Frame = 1
Query: 340 ESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLAALHKSE 1305
E +D C HC E F E + N ++H CFVCAQC + + + +GR YC HD+ +LFAP C +C FI+ GRVIKA++ SWH CF C C + L++ F K A C +C N K G C+KC + LK + E YH YHF C +C +EL + REKDGD YCLRCFDKMG+PIC C+RP+EERV++A+GK +HVEHFVC+ C KPFLGSR++ +CELH+Q + C C++ + E+V L K +C+ HF C CD ++ +K Y+ D +P+CK C + P LRKR+A +HK E
Sbjct: 39 EIGDDFCRHCHEGFKVNEKVVQARNEKYHVDCFVCAQCFQPFPDGVYYDFDGRKYCEHDFHVLFAPCCGKCGYFIV-GRVIKAMNSSWHPECFRCQICDKCLADD-GFVKHAGRALCHECNNREKANSSGRILCFKCHSYVDESQQLKYQSEVYHAYHFTCSSCGSELSSDAREKDGDLYCLRCFDKMGIPICGACRRPIEERVVHALGKTWHVEHFVCARCEKPFLGSRHYEKKGLAYCELHYQQLFGMLCFSCNQVIPGETVFALNKAWCVDHFGCIVCDRRISPKTKFYEFDLRPVCKSCYEMFPMELRKRIAKMHKLE 358
BLAST of LIM domain-containing protein vs. TrEMBL
Match: A0A0X3Q8E6 (LIM domain-containing protein OS=Schistocephalus solidus OX=70667 GN=TR160952 PE=4 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 5.233e-88 Identity = 147/330 (44.55%), Postives = 201/330 (60.91%), Query Frame = 1
Query: 316 INLLNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLAALHKSE 1305
I+ + E+ ND C HC E F+ E + N +FH CFVCAQC + + + +GR YC HD+ +LFAP C C FI+ GRVIKA++ SWH +CF CSSC + L++ F K A C +C K G C+KC + LK E YH YHF C +C +EL + REKDGD YCLRC DKMG+PIC C+RP+EERV++A+GK +HVEHFVC+ C KPFLGSR++ +CELH+Q + C C++ + E+V + K +C+ HF C CD ++ +K Y+ D +P+CK C + P LRKR+A +HK E
Sbjct: 21 IDNYPKSLENENDYCLHCGEGFDVNEKIVQARNEKFHVGCFVCAQCFQPFPDGVYYNFDGRKYCEHDFHVLFAPCCGGCGCFIV-GRVIKAMNSSWHPACFCCSSCKKGLADD-GFVKHAGRALCHECNAKEKANSSGRLLCFKCHSYVEEGQQLKYRSEIYHAYHFTCSSCGSELSSDAREKDGDLYCLRCHDKMGIPICGACRRPIEERVVHALGKTWHVEHFVCARCEKPFLGSRHYEKKGLAYCELHYQQLFGMLCYSCNQVIPGETVYAMNKAWCVDHFGCVVCDRQISPKTKFYEFDLRPVCKACYEMFPIELRKRIAKMHKME 348
BLAST of LIM domain-containing protein vs. TrEMBL
Match: A0A0R3S8P5 (LIM domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS538 PE=4 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 9.265e-88 Identity = 144/322 (44.72%), Postives = 196/322 (60.87%), Query Frame = 1
Query: 340 ESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLAALHKSE 1305
E +D C HC E F E + N ++H CFVCAQC + + + +GR YC HD+ +LFAP C +C FI+ GRVIKA++ SWH CF C C + L++ F K A C +C K G C+KC + LK + E YH YHF C +C +EL + REKDGD YCLRCFDKMG+PIC C+RP+EERV++A+GK +HVEHFVC+ C KPFLGSR++ +CELH+Q + C C++ + E+V L K +C+ HF C CD ++ +K Y+ D +P+CK C + P LRKR+A +HK E
Sbjct: 39 EIGDDFCLHCHEGFKVNEKVVQARNEKYHVDCFVCAQCFQPFPDGVYYDFDGRKYCEHDFHVLFAPCCGKCGYFIV-GRVIKAMNSSWHPECFRCQICDKCLADD-GFVKHAGRALCHECNAREKANSSGRILCFKCHSYVDESQQLKYQSEVYHAYHFTCSSCGSELSSDAREKDGDLYCLRCFDKMGIPICGACRRPIEERVVHALGKTWHVEHFVCARCEKPFLGSRHYEKKGLAYCELHYQQLFGMLCYSCNQVIPGETVFALNKAWCVDHFGCIVCDRRISPKTKFYEFDLRPVCKSCYEMFPMELRKRIAKMHKLE 358
BLAST of LIM domain-containing protein vs. TrEMBL
Match: A0A0R3WA86 (LIM domain-containing protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS7437 PE=4 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 7.025e-87 Identity = 143/319 (44.83%), Postives = 195/319 (61.13%), Query Frame = 1
Query: 349 NDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLAALHKSE 1305
+D C HC E F E + N ++H CFVCAQC + + + +GR YC HD+ +LFAP C +C FI+ GRVIKA++ SWH CF C C + L++ F K A C +C K C+KC + LK + E YH YHF C +C +EL + REKDGD YCLRCFDKMG+PIC C+RP+EERV++A+GK +HVEHFVC+ C KPFLGSR++ +CELH+Q + C C++ + E+V L K +C+ HF C ACD ++ +K Y+ D +P+CK C + P LRKR+A +HK E
Sbjct: 42 DDFCLHCHEGFKVNEKVVQARNEKYHVDCFVCAQCFQPFPDGVYYDFDGRKYCEHDFHVLFAPCCGKCGYFIV-GRVIKAMNSSWHPECFRCQICDKCLADD-GFVKHAGRALCHECNAREKANSSDRILCFKCHSYVDESQQLKYQSEVYHAYHFTCSSCGSELSSDAREKDGDLYCLRCFDKMGIPICGACRRPIEERVVHALGKTWHVEHFVCARCEKPFLGSRHYEKKGLAYCELHYQQLFGMLCYSCNQVIPGETVFALNKAWCVDHFGCIACDRRISPKTKFYEFDLRPVCKSCYEMFPIELRKRIAKMHKLE 358
BLAST of LIM domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000051335.1 (LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:103034328]) HSP 1 Score: 249.21 bits (635), Expect = 1.523e-78 Identity = 134/320 (41.88%), Postives = 190/320 (59.38%), Query Frame = 1
Query: 358 CCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLAALHKSE*QRQ 1317
C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L K +VD KP+CK C +LP L++RLA + +R+
Sbjct: 21 CERCKSGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPDCFCCDICQAVLADVGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIEEQPLIFKNDPYHPDHFNCSNCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCYHCNRVIEGDVVSALNKAWCVNCFSCSTCNTKLTLKDKFVEVDLKPVCKHCYDRLPEELKRRLAKRERDARERK 337
BLAST of LIM domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000048761.1 (LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:103034328]) HSP 1 Score: 238.81 bits (608), Expect = 1.455e-74 Identity = 128/302 (42.38%), Postives = 180/302 (59.60%), Query Frame = 1
Query: 358 CCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 21 CERCKSGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPDCFCCDICQAVLADVGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIEEQPLIFKNDPYHPDHFNCSNCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCYHCNRVIEGDVVSALNKAWCVNCFSCSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 319
BLAST of LIM domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000053488.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02001973.1:190879:202569:-1 gene:ENSAMXG00000039854.1 transcript:ENSAMXT00000053488.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 172.555 bits (436), Expect = 2.615e-50 Identity = 91/233 (39.06%), Postives = 132/233 (56.65%), Query Frame = 1
Query: 589 IDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLA 1287
+++SWH CF C C L++ F K C+ C+ + G + C KC ++ + L + YHP HF C C EL + +E + YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ + +CE H+ + C +C+R +G E V L K +C+ F C C + L K ++D KP+CK C +++P L++RLA
Sbjct: 1 MNNSWHPDCFCCDICQAVLADV-GFAKNAGRHLCRPCHIRERACSLGKYVCQKCHA-MIEEQPLMFRNDPYHPDHFNCSNCGKELTADAKELKNELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKSQAYCETHYNQLFGNVCHHCNRVIGGEVVSALNKAWCIGCFTCSTCSTKLTLKEKFVELDLKPVCKQCYERMPEELKRRLA 231 HSP 2 Score: 51.9878 bits (123), Expect = 4.515e-7 Identity = 56/218 (25.69%), Postives = 89/218 (40.83%), Query Frame = 1
Query: 412 NNQFHKKCFVCAQCLEELEVELVFQNEGRVYC-PHDYK----ILFAPACHRCNQFILEGRVIKAID--HSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGH-LKSEGEFYHPYHFKCKTCLNE-LDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFI 1038
NN +H CF C C L +N GR C P + L C +C+ I E ++ D H H +C ++ K+ + YC C++ + GV C C+ PI +G + + G+ +H HF C C L E+ YC ++++ +C C R + V+ A+ KA+ + F CS CS F+
Sbjct: 2 NNSWHPDCFCCDICQAVLADVGFAKNAGRHLCRPCHIRERACSLGKYVCQKCHAMIEEQPLMFRNDPYHPDHFNC-----SNCGKELTADAKELKNELYCLPCHDKM-----GVPICGACRRPI--EGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKSQAYCETHYNQLFGNVCHHCNRVIGGEVVSALNKAWCIGCFTCSTCSTKLTLKEKFV 207 HSP 3 Score: 50.8322 bits (120), Expect = 8.811e-7 Identity = 30/104 (28.85%), Postives = 53/104 (50.96%), Query Frame = 1
Query: 412 NNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRI 723
Q+H + FVCA+C + ++ + + YC Y LF CH CN+ ++ G V+ A++ +W CF CS+C L+ F + + C++CY + +
Sbjct: 124 GKQWHVEHFVCAKCEKPFLGHRHYERKSQAYCETHYNQLFGNVCHHCNR-VIGGEVVSALNKAWCIGCFTCSTCSTKLTLKEKFVELDLKPVCKQCYERMPEEL 226
BLAST of LIM domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000045923.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02001973.1:190879:202826:-1 gene:ENSAMXG00000039854.1 transcript:ENSAMXT00000045923.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 167.162 bits (422), Expect = 1.877e-48 Identity = 81/200 (40.50%), Postives = 117/200 (58.50%), Query Frame = 1
Query: 688 CQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLA 1287
C+ C+ + G + C KC ++ + L + YHP HF C C EL + +E + YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ + +CE H+ + C +C+R +G E V L K +C+ F C C + L K ++D KP+CK C +++P L++RLA
Sbjct: 10 CRPCHIRERACSLGKYVCQKCHA-MIEEQPLMFRNDPYHPDHFNCSNCGKELTADAKELKNELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKSQAYCETHYNQLFGNVCHHCNRVIGGEVVSALNKAWCIGCFTCSTCSTKLTLKEKFVELDLKPVCKQCYERMPEELKRRLA 208 HSP 2 Score: 51.2174 bits (121), Expect = 6.273e-7 Identity = 30/104 (28.85%), Postives = 53/104 (50.96%), Query Frame = 1
Query: 412 NNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRI 723
Q+H + FVCA+C + ++ + + YC Y LF CH CN+ ++ G V+ A++ +W CF CS+C L+ F + + C++CY + +
Sbjct: 101 GKQWHVEHFVCAKCEKPFLGHRHYERKSQAYCETHYNQLFGNVCHHCNR-VIGGEVVSALNKAWCIGCFTCSTCSTKLTLKEKFVELDLKPVCKQCYERMPEEL 203
BLAST of LIM domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000036502.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02001973.1:190879:204543:-1 gene:ENSAMXG00000039854.1 transcript:ENSAMXT00000036502.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 167.548 bits (423), Expect = 2.204e-48 Identity = 79/187 (42.25%), Postives = 112/187 (59.89%), Query Frame = 1
Query: 727 GVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLA 1287
G + C KC ++ + L + YHP HF C C EL + +E + YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ + +CE H+ + C +C+R +G E V L K +C+ F C C + L K ++D KP+CK C +++P L++RLA
Sbjct: 43 GKYVCQKCHA-MIEEQPLMFRNDPYHPDHFNCSNCGKELTADAKELKNELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKSQAYCETHYNQLFGNVCHHCNRVIGGEVVSALNKAWCIGCFTCSTCSTKLTLKEKFVELDLKPVCKQCYERMPEELKRRLA 228 HSP 2 Score: 51.2174 bits (121), Expect = 7.154e-7 Identity = 30/104 (28.85%), Postives = 53/104 (50.96%), Query Frame = 1
Query: 412 NNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRI 723
Q+H + FVCA+C + ++ + + YC Y LF CH CN+ ++ G V+ A++ +W CF CS+C L+ F + + C++CY + +
Sbjct: 121 GKQWHVEHFVCAKCEKPFLGHRHYERKSQAYCETHYNQLFGNVCHHCNR-VIGGEVVSALNKAWCIGCFTCSTCSTKLTLKEKFVELDLKPVCKQCYERMPEEL 223 HSP 3 Score: 47.7506 bits (112), Expect = 9.007e-6 Identity = 48/174 (27.59%), Postives = 81/174 (46.55%), Query Frame = 1
Query: 391 ECKILFNNNQFHKKCFVCAQCLEELEVELV-FQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELD--RNFREKDGDFYCLRCFDKM 903
E ++F N+ +H F C+ C +EL + +NE +YC + + P C C + I EGRV+ A+ WH F C+ C + +++ + AYC+ YN + + H+C + G V+ K+ + F C TC +L F E D C +C+++M
Sbjct: 56 EQPLMFRNDPYHPDHFNCSNCGKELTADAKELKNE--LYCLPCHDKMGVPICGACRRPI-EGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYER-KSQAYCETHYNQLFGNV--CHHCNRVIGGEVVSALNKA----WCIGCFTCSTCSTKLTLKEKFVELDLKPVCKQCYERM 219
BLAST of LIM domain-containing protein vs. Ensembl Sea Lamprey
Match: lims2 (LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]) HSP 1 Score: 190.274 bits (482), Expect = 5.523e-57 Identity = 108/250 (43.20%), Postives = 150/250 (60.00%), Query Frame = 1
Query: 325 LNRQKESHNDLCCHCEEAFNEGECKILFNNNQ--FHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELH 1068
LN N C C+ F + + N+N FH+ CFVCAQC ++ +++ EGR YC HD+++LFAP C + +FI+ GRVIKA+++SWH CF C+ C E L++ K R+ C+ C+N K + G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMG+PIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H
Sbjct: 66 LNMASALANAACERCKAGFPPSATERIVNSNGELFHENCFVCAQCFQQF----LYEFEGRKYCEHDFQMLFAPCCGQSGEFIV-GRVIKAMNNSWHPECFRCNICSEMLADVGFVKNAGRH-LCRPCHNREKAKGLGKYICQKCHA-IIDEQPLLFKNDPYHPDHFNCTNCGKELTADARELKGELYCLPCHDKMGIPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETH 308 HSP 2 Score: 52.7582 bits (125), Expect = 5.875e-8 Identity = 37/151 (24.50%), Postives = 63/151 (41.72%), Query Frame = 1
Query: 751 KGPIVLDGHLKSEGEFYHPYHFKCKTCLNEL-DRNFREKDGDFYCLRCFDK-----MGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACD 1185
G ++ +K+ +HP F+C C L D F + G C C ++ +G IC C ++E+ + YH +HF C+ C K + E++C M + C C R + V + K + ++HF C C+
Sbjct: 139 SGEFIVGRVIKAMNNSWHPECFRCNICSEMLADVGFVKNAGRHLCRPCHNREKAKGLGKYICQKCHAIIDEQPLLFKNDPYHPDHFNCTNCGKELTADARELKG-ELYCLPCHDKMGIPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCE 288 HSP 3 Score: 52.373 bits (124), Expect = 9.373e-8 Identity = 49/188 (26.06%), Postives = 74/188 (39.36%), Query Frame = 1
Query: 739 CYKCKG---PIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFI-----------HNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKL 1260
C +CK P + + S GE +H F C C + F +G YC F + P C + RVI AM ++H E F C+ CS+ L F+ HN+E + + C+ CH + ++ + F Y HF C C L ++ K + C PC K+
Sbjct: 77 CERCKAGFPPSATERIVNSNGELFHENCFVCAQCFQQFLYEF---EGRKYCEHDFQMLFAPCCGQSGEFIVGRVIKAMNNSWHPECFRCNICSE-MLADVGFVKNAGRHLCRPCHNRE-----KAKGLGKYICQKCHAIIDEQPLLFKNDPYHPDHFNCTNCGKELTADARELKGEL--YCLPCHDKM 253
BLAST of LIM domain-containing protein vs. Ensembl Sea Lamprey
Match: PXN (paxillin [Source:HGNC Symbol;Acc:HGNC:9718]) HSP 1 Score: 98.5969 bits (244), Expect = 7.064e-24 Identity = 63/218 (28.90%), Postives = 106/218 (48.62%), Query Frame = 1
Query: 421 FHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEG-RVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKG--PIVLDGHLKSEGEFYHPYHFKCKTCLNE-LDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCE 1062
+H + FVC C E+ F+ +G+ YC DY LF+P C CN+ +++ RV+ A+D +WH F + F + + YC++ Y + + KC G ++ +L + +HP F C+ C ++ +F E +G YC + + +CS C++P+ R I AM K +H EHFVC+FC K + N + +C+
Sbjct: 10 WHPEHFVCVHCQVEIGSRNFFEKDGQPYCEEDYHSLFSPRCAYCNEAVMDNQRVVTALDRTWHPEHF-FCAQCGRPFGEEGFHERDGKPYCRQDYYGM--------FAPKCNGCSRAIMQNYLSALNTVWHPECFICRECFTPFINGSFFEHEGQPYCEVHYHERRGSLCSGCQKPITGRCISAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQ 218 HSP 2 Score: 93.2041 bits (230), Expect = 5.580e-22 Identity = 64/232 (27.59%), Postives = 109/232 (46.98%), Query Frame = 1
Query: 574 RVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGH--LKSEGEFYHPYHFKCKTCLNEL-DRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKL 1260
+V+ A+ +WH F C C + + + F+K + YC++ Y+ + + P YC + V+D + + +HP HF C C + F E+DG YC + + M P C+ C R + + + A+ +H E F+C C PF+ +F H + +CE+H+ C C + + + + K + +HF C C LN + + D KP C+PC KL
Sbjct: 1 QVVTAMGRTWHPEHFVCVHCQVEIGSRNFFEK-DGQPYCEEDYHSLFS--PRCAYCNE----AVMDNQRVVTALDRTWHPEHFFCAQCGRPFGEEGFHERDGKPYCRQDYYGMFAPKCNGCSRAIMQNYLSALNTVWHPECFICRECFTPFINGSFFEHEGQPYCEVHYHERRGSLCSGCQKPITGRCISAMAKKFHPEHFVCAFCLKQLNKGTFKEQND-KPYCQPCFIKL 224 HSP 3 Score: 76.6406 bits (187), Expect = 3.049e-16 Identity = 51/183 (27.87%), Postives = 91/183 (49.73%), Query Frame = 1
Query: 358 CCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRN-FREKDGDFYCLRCFDKM 903
C +C EA + + + + +H + F CAQC E + +G+ YC DY +FAP C+ C++ I++ + A++ WH CF + + +F + E YC+ Y++ + + C C+ PI + + + +HP HF C CL +L++ F+E++ YC CF K+
Sbjct: 50 CAYCNEAVMDNQRVVTALDRTWHPEHFFCAQCGRPFGEEGFHERDGKPYCRQDYYGMFAPKCNGCSRAIMQ-NYLSALNTVWHPECF-ICRECFTPFINGSFFEHEGQPYCEVHYHERRGSL-----CSGCQKPITGRC-ISAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQPCFIKL 224
BLAST of LIM domain-containing protein vs. Ensembl Sea Lamprey
Match: PXN (paxillin [Source:HGNC Symbol;Acc:HGNC:9718]) HSP 1 Score: 99.7525 bits (247), Expect = 1.025e-22 Identity = 72/233 (30.90%), Postives = 113/233 (48.50%), Query Frame = 1
Query: 565 LEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNEL-DRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKL 1260
+ G+V+ A+ +WH F C+ C E + + F++ + YC+K Y+ + + C C GPI LD + + + +HP HF C C + D F EKDG YC + + +M P C C R + E I A+ +H E FVC C PF+ +F H + +CE+H+ C C + + + + K + +HF C C LN + + + KP C PC KL
Sbjct: 329 IAGQVVTAMGRTWHPEHFVCTECQEEIGARNFFER-DGLPYCEKDYHFLFSP-----RCAYCSGPI-LDKVVTALDKTWHPEHFFCVQCGHFFGDEGFHEKDGKPYCRQDYFEMFAPKCGGCSRAIVENYISALSALWHPECFVCRECFTPFINGSFFEHEGQPYCEVHYHERRGSLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLNKGT-FKEQNDKPYCHPCFIKL 553 HSP 2 Score: 97.8265 bits (242), Expect = 4.420e-22 Identity = 72/272 (26.47%), Postives = 123/272 (45.22%), Query Frame = 1
Query: 286 VLQNVNEVKDINLLNRQKES-HNDLCCHCEEAFNEGECK----------ILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKG--PIVLDGHLKSEGEFYHPYHFKCKTCLNE-LDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFC 1059
V+QN + + L+ S +DL +G+C + +H + FVC +C EE+ F+ +G YC DY LF+P C C+ IL+ +V+ A+D +WH F F + + YC++ Y ++ + KC G +++ ++ + +HP F C+ C ++ +F E +G YC + + +CS C++P+ R I AM K +H EHFVC+FC K + N + +C
Sbjct: 285 VIQNKGGAQTGDQLDSMLGSLQSDLNRQGVATLAKGQCAACLKPIAGQVVTAMGRTWHPEHFVCTECQEEIGARNFFERDGLPYCEKDYHFLFSPRCAYCSGPILD-KVVTALDKTWHPEHF-FCVQCGHFFGDEGFHEKDGKPYCRQDYFEM--------FAPKCGGCSRAIVENYISALSALWHPECFVCRECFTPFINGSFFEHEGQPYCEVHYHERRGSLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYC 546 HSP 3 Score: 66.6254 bits (161), Expect = 5.271e-12 Identity = 32/109 (29.36%), Postives = 53/109 (48.62%), Query Frame = 1
Query: 916 CSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICK 1242
C+ C +P+ +V+ AMG+ +H EHFVC+ C + +F + +CE + + C YC + + V L K + +HF C C D ++ D KP C+
Sbjct: 322 CAACLKPIAGQVVTAMGRTWHPEHFVCTECQEEIGARNFFERDGLPYCEKDYHFLFSPRCAYCSGPILDKVVTALDKTWHPEHFFCVQCGHFFGDEG-FHEKDGKPYCR 429
BLAST of LIM domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007081.1 (pep scaffold:Pmarinus_7.0:GL476780:360940:430661:-1 gene:ENSPMAG00000006392.1 transcript:ENSPMAT00000007081.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 73.559 bits (179), Expect = 3.166e-14 Identity = 47/167 (28.14%), Postives = 80/167 (47.90%), Query Frame = 1
Query: 760 IVLDGHLKSEGEFYHPYHFKCKTCLNEL-DRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHR-----DVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICK 1242
I+ L + G+ +HP F C C L + F E+ G+ YC C++K P C+ C++ + +++A+ + +H FVC+ C KPF S + + + E +CE + ++ F CH + G + +E L + F C C L + Y KP+CK
Sbjct: 425 IIRGPFLVALGKSWHPAEFNCAQCHTTLTETGFVEEQGNVYCETCYEKYFAPDCAKCRKKIMGEIMHALRQTWHTTCFVCASCGKPFGNSLFHMEDGEPYCEKDYVVL---FSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNL-EGQPFYSKKDKPLCK 587 HSP 2 Score: 56.9954 bits (136), Expect = 6.527e-9 Identity = 26/67 (38.81%), Postives = 38/67 (56.72%), Query Frame = 1
Query: 421 FHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEG-RVIKAIDHSWHASCF 618
+H CFVCA C + L +G YC DY +LF+ CH C+ + G + I+A+ H+WH +CF
Sbjct: 497 WHTTCFVCASCGKPFGNSLFHMEDGEPYCEKDYVVLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCF 563 HSP 3 Score: 49.2914 bits (116), Expect = 1.346e-6 Identity = 28/95 (29.47%), Postives = 44/95 (46.32%), Query Frame = 1
Query: 334 QKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCF 618
Q +C C + G + + +H F CAQC L + +G VYC Y+ FAP C +C + I+ G ++ A+ +WH +CF
Sbjct: 411 QPSQRTPMCGQCNQII-RGPFLVALGKS-WHPAEFNCAQCHTTLTETGFVEEQGNVYCETCYEKYFAPDCAKCRKKIM-GEIMHALRQTWHTTCF 502 HSP 4 Score: 48.521 bits (114), Expect = 2.838e-6 Identity = 56/204 (27.45%), Postives = 95/204 (46.57%), Query Frame = 1
Query: 493 GRVYCPHDYKILFA---------PACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRN-FREKDGDFYCLRCFDKMGVPICSVCKRPVE--ERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELH 1068
G+ P K+ +A P C +CNQ I+ G + A+ SWH + FNC+ C +L+ + F + + N YC+ CY K P C KC+ I+ + + + + +H F C +C + F +DG+ YC + + + C C PVE ++ I A+G +H F+C+ C G ++ + C+ H
Sbjct: 394 GQAVSPSRGKVQWAQHCQPSQRTPMCGQCNQ-IIRGPFLVALGKSWHPAEFNCAQCHTTLTETG-FVEEQGNVYCETCYE--KYFAPD---CAKCRKKIMGE-IMHALRQTWHTTCFVCASCGKPFGNSLFHMEDGEPYCEKDYVVLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKH 589
BLAST of LIM domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006267.1 (pep scaffold:Pmarinus_7.0:GL478686:5064:37345:-1 gene:ENSPMAG00000005668.1 transcript:ENSPMAT00000006267.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 65.0846 bits (157), Expect = 2.137e-12 Identity = 53/184 (28.80%), Postives = 87/184 (47.28%), Query Frame = 1
Query: 724 PGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDR-NFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFL-GSRYFIHNKEVFCELHFQMMTMKF--------CEYCHRDV-GKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICK 1242
P +H CYKC+ + L+ E +H F CK C +L + F K+G++ C + ++ C C VE V+ A+G+ YH FVCS C +PF G+R + +E C Q ++ C C RD+ +++ L++ + L F+C AC +L + + D P C+
Sbjct: 21 PAIH-CYKCRD-LCRGEVLRVENRHFHVSCFTCKVCGCDLAQCGFFVKNGEYVCTLDYQRLYGTRCQACGDFVEGEVVTALGRTYHPRCFVCSVCRQPFPSGARVTFNGRECLCHECTQPISPVLRDPSNPSNCAGCGRDIKNGQALLALERHWHLGCFKCRACGKVL--TGEYISKDGMPYCE 200 HSP 2 Score: 61.6178 bits (148), Expect = 4.129e-11 Identity = 53/190 (27.89%), Postives = 77/190 (40.53%), Query Frame = 1
Query: 400 ILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKN--RIPG-VHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYA 960
+ N FH CF C C +L F G C DY+ L+ C C F+ EG V+ A+ ++H CF CS C + + + R C +C + R P C C I L + +H FKC+ C L + KDG YC R + +C C++ + RV+ A
Sbjct: 37 LRVENRHFHVSCFTCKVCGCDLAQCGFFVKNGEYVCTLDYQRLYGTRCQACGDFV-EGEVVTALGRTYHPRCFVCSVCRQPFPSGARVTFNGRECLCHECTQPISPVLRDPSNPSNCAGCGRDIKNGQALLALERHWHLGCFKCRACGKVLTGEYISKDGMPYCERDYHSQFGVLCDGCEKYITGRVLEA 225 HSP 3 Score: 45.8246 bits (107), Expect = 7.906e-6 Identity = 30/120 (25.00%), Postives = 47/120 (39.17%), Query Frame = 1
Query: 916 CSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLR 1275
C C+ V+ + +HV F C C +F+ N E C L +Q + C+ C V E V L + Y + F C C +++ R+ +C C Q + LR
Sbjct: 25 CYKCRDLCRGEVLRVENRHFHVSCFTCKVCGCDLAQCGFFVKNGEYVCTLDYQRLYGTRCQACGDFVEGEVVTALGRTYHPRCFVCSVCRQPFPSGARVTFNGRECLCHECTQPISPVLR 144
BLAST of LIM domain-containing protein vs. Ensembl Yeast
Match: LRG1 (GTPase-activating protein (GAP); contains Rho1p-specific GAP activity, interacting with activated forms of Rho1p; functions along with Sac7p as a negative regulator of the Pkc1p-mediated cell wall integrity signaling pathway; negative regulator of cell wall 1,3-beta-glucan biosynthesis; required for efficient cell fusion; contains a RhoGAP domain and three Lin-11-Isl1-Mec-3 (LIM) domains [Source:SGD;Acc:S000002399]) HSP 1 Score: 51.2174 bits (121), Expect = 3.192e-7 Identity = 39/160 (24.38%), Postives = 70/160 (43.75%), Query Frame = 1
Query: 739 CYKCKGPIVLDGH-----LKSEGEFYHPYHFKCKTCLNELDRNF------REKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLK--KVYCLQHFRCFA 1179
C +C ++ D LK+ G++YH F C+ C L + + + C + + +C VC P+ A G Y EHF C+ C+ P + F++ +++C+ HF K C+ C + + +EF K +++C H C+
Sbjct: 28 CARCNKLVIPDSQRTKTTLKALGKYYHESCFTCQDCQKPLKPKYFPYQVDKTSESILLCQYDYFRRHNLLCHVCDTPLRGLYYTAFGYRYDEEHFSCTICATPCGVKKCFMYGNQLYCKYHFLKYFSKRCKGCEFPISDQYIEFPKGEEIHCW-HPECYG 186
BLAST of LIM domain-containing protein vs. Ensembl Nematostella
Match: EDO47660 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RLT9]) HSP 1 Score: 246.128 bits (627), Expect = 1.001e-77 Identity = 128/310 (41.29%), Postives = 184/310 (59.35%), Query Frame = 1
Query: 355 LCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRL 1284
+C C E F E + N H++CFVC QC + L ++ +GR +C HD++ LFAP C +C +F++ GRVIKA+ +WH CF C C + L+++ K R A C+KC D K + G + C KC I H+ G+ HP+H+ C C ELD R+KD + YCLRC D +G PIC C+RPVE+RV++A+GKA+HVEHFVC+ C KPF G RY+ +CE H+ + C C++ + + V L K +C+QHF C C+ L SK ++ D +P+CK C +K+P L+KRL
Sbjct: 20 ICAVCHEGFGVDERMVNSNGQILHERCFVCVQCFQAFPDGLFYEYDGRRFCEHDFQTLFAPCCKQCGKFVI-GRVIKAMQANWHPDCFRCEICNDCLADTGFVKNAGR-ALCKKCNADEKTKKTGRYVCRKCHTYIPEGEHIMYMGDPVHPWHYNCFCCGKELDHFCRKKDTELYCLRCHDLLGTPICGACRRPVEDRVVHALGKAWHVEHFVCAKCEKPFYGHRYYERKGLAYCETHYNELYGDICFECNKAITGDVVNALNKCWCVQHFTCIGCNISLTLKSKFHEFDMQPLCKKCYEKMPMELKKRL 327
BLAST of LIM domain-containing protein vs. Ensembl Nematostella
Match: EDO41181 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S548]) HSP 1 Score: 113.235 bits (282), Expect = 1.389e-28 Identity = 74/241 (30.71%), Postives = 116/241 (48.13%), Query Frame = 1
Query: 541 CHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNEL-DRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKL 1260
C CN+ I+ G+V A+ +WH F C +C L + F++ + YC++ Y+D C C GPI LD + + + +HP HF C C N D F E+DG +C + M P C C +P+ + I A+ +H E F+C+ C +PF G +F H+ +CE+H+ C C + + + + + + +HF C C LN + + D KP C PC KL
Sbjct: 26 CAACNKPII-GQVCTALGKTWHPEHFACVACEAPLGTQNFFER-DGKPYCERDYHDTF-----APRCAYCNGPI-LDSCVTALDQTWHPEHFVCAECGNPFGDTGFHERDGKPFCREDYYAMFAPRCGGCGQPIMDNYISALSAHWHAECFICTECRQPFPGGSFFDHDGRPYCEMHYHAKRGTLCYSCQKPITGRCITAMHRKFHPEHFVCAFCLKQLNKGTFKEQND-KPYCHPCFVKL 257 HSP 2 Score: 84.7297 bits (208), Expect = 1.430e-18 Identity = 66/248 (26.61%), Postives = 106/248 (42.74%), Query Frame = 1
Query: 325 LNRQKESHN--DLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNEL-DRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFC 1059
+ RQ S +C C + C L +H + F C C L + F+ +G+ YC DY FAP C CN IL+ + A+D +WH F + + + F + + +C++ Y + C C PI +D ++ + +H F C C +F + DG YC + +C C++P+ R I AM + +H EHFVC+FC K + N + +C
Sbjct: 13 MTRQGVSTTKKGMCAACNKPIIGQVCTAL--GKTWHPEHFACVACEAPLGTQNFFERDGKPYCERDYHDTFAPRCAYCNGPILD-SCVTALDQTWHPEHF-VCAECGNPFGDTGFHERDGKPFCREDYYAMF-----APRCGGCGQPI-MDNYISALSAHWHAECFICTECRQPFPGGSFFDHDGRPYCEMHYHAKRGTLCYSCQKPITGRCITAMHRKFHPEHFVCAFCLKQLNKGTFKEQNDKPYC 250 HSP 3 Score: 65.855 bits (159), Expect = 3.823e-12 Identity = 31/110 (28.18%), Postives = 53/110 (48.18%), Query Frame = 1
Query: 913 ICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICK 1242
+C+ C +P+ +V A+GK +H EHF C C P +F + + +CE + C YC+ + V L + + +HF C C + D+ ++ D KP C+
Sbjct: 25 MCAACNKPIIGQVCTALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCERDYHDTFAPRCAYCNGPILDSCVTALDQTWHPEHFVCAECGNPFGDTG-FHERDGKPFCR 133
BLAST of LIM domain-containing protein vs. Ensembl Nematostella
Match: LDB3 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKY2]) HSP 1 Score: 87.8113 bits (216), Expect = 1.659e-20 Identity = 52/166 (31.33%), Postives = 83/166 (50.00%), Query Frame = 1
Query: 751 KGPIVLDGHLKSEGEFYHPYHFKCKTCLNEL-DRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKES--VEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPIC 1239
+GP V + G+ +HP HF C C + L ++ F E+ G YC + ++K P C CK+P+ + A+GK +H EHF CS CSK + + +CE+ ++ + C C+R +G VE + + F+C C+ LL + S+ Y KP C
Sbjct: 1 RGPFV-----SAIGKSWHPDHFTCAGCGDSLQNQGFIEEGGKLYCEKDYNKFFAPHCESCKQPIVGPCVQAIGKTFHPEHFTCSSCSKQIGSEGFNVDRGMPYCEMCYKKLFCVKCAGCNRAIGGGDRWVEAIDVSWHATCFKCSTCNKLL-EGSQFYAYGGKPFC 160 HSP 2 Score: 65.0846 bits (157), Expect = 1.749e-12 Identity = 57/169 (33.73%), Postives = 86/169 (50.89%), Query Frame = 1
Query: 571 GRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNEL-DRNFREKDGDFYCLRCFDKMGVPICSVCKRPVE--ERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELH 1068
G + AI SWH F C+ CG+SL N F + YC+K YN K P +C CK PIV +++ G+ +HP HF C +C ++ F G YC C+ K+ C+ C R + +R + A+ ++H F CS C+K GS+++ + + FC LH
Sbjct: 2 GPFVSAIGKSWHPDHFTCAGCGDSLQNQ-GFIEEGGKLYCEKDYN--KFFAP---HCESCKQPIVGP-CVQAIGKTFHPEHFTCSSCSKQIGSEGFNVDRGMPYCEMCYKKLFCVKCAGCNRAIGGGDRWVEAIDVSWHATCFKCSTCNKLLEGSQFYAYGGKPFCVLH 163 HSP 3 Score: 50.0618 bits (118), Expect = 2.662e-7 Identity = 45/163 (27.61%), Postives = 68/163 (41.72%), Query Frame = 1
Query: 412 NNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKG----PIVLDGHLKSEGEFYHPYHFKCKTCLNELDRN-FREKDGDFYCL 885
+H F CA C + L+ + + G++YC DY FAP C C Q I+ G ++AI ++H F S S F YC+ CY + +C KC G D +++ +H FKC TC L+ + F G +C+
Sbjct: 9 GKSWHPDHFTCAGCGDSLQNQGFIEEGGKLYCEKDYNKFFAPHCESCKQPIV-GPCVQAIGKTFHPEHF-TCSSCSKQIGSEGFNVDRGMPYCEMCYKKL--------FCVKCAGCNRAIGGGDRWVEAIDVSWHATCFKCSTCNKLLEGSQFYAYGGKPFCV 161
BLAST of LIM domain-containing protein vs. Ensembl Nematostella
Match: LIMPET (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RFX6]) HSP 1 Score: 78.9518 bits (193), Expect = 1.031e-15 Identity = 86/328 (26.22%), Postives = 139/328 (42.38%), Query Frame = 1
Query: 343 SHNDLCCHCEEAFNEGECKI----LFNNNQFHKKCFVCAQCLEELEVELVF-QNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNEL-DRNFREKDGDFYCLRCFDKMGVPICSVCK---RPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKE-VFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLAALH 1296
+ C C N G+ + L ++ +H KCF C + EL V+L++ + +YC + P C C + I G +A++ +WH C S + ++ F E + C +CY++ N C + GP D ++S + +H FKC C +L + F KD C C +C+ C P E++V Y K +H + F+C C +P +GS+ FI E C F K C C++ + SV+ Y + F C CD L S K + + +C+ C ++ KR A H
Sbjct: 188 AQPSTCKRCNGPVNPGDMALFAERLGPDSCWHVKCFTCEE-DGELLVDLIYCSKDDEIYCCRHWGEKLKPRCAGCEELIYVGEYSQALEKNWHPG-HLCCSYCDESLSNQKFVTVEGSPSCFRCYDE--NFANRCEACGEPIGPGSKDVDVRS--KHWHEGCFKCSQCSKQLMNEGFTLKDEKLICHGCRGINPSKVCAACNGDFAPGEKKVGY-QSKTFHDKCFICDECKQP-IGSKQFIRRDERRLCNNCFDSKFAKVCVKCNQVIKTSSVQHAGSTYHSECFTCHHCDKPLA-GSPFTKQEGRNVCQNCYRE---RYAKRCGACH 503 HSP 2 Score: 68.1662 bits (165), Expect = 3.300e-12 Identity = 78/302 (25.83%), Postives = 114/302 (37.75%), Query Frame = 1
Query: 358 CCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEG-RVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVL-DGHLKSEGEFYHPYHFKCKTCLNEL-DRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKES--VEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPC 1248
C CEE GE N +H C+ C E L + EG C Y FA C C + I G + + WH CF CS C + L N K E+ C C +++ C C G + + + + +H F C C + + F +D C CFD +C C + ++ + G YH E F C C KP GS + C+ ++ K C CH + + V + +K + + F C C+ L K D + IC PC
Sbjct: 258 CAGCEELIYVGEYSQALEKN-WHPGHLCCSYCDESLSNQKFVTVEGSPSCFRCYDENFANRCEACGEPIGPGSKDVDVRSKHWHEGCFKCSQCSKQLMNEGFTLKDEK-LICHGCRGINPSKV-----CAACNGDFAPGEKKVGYQSKTFHDKCFICDECKQPIGSKQFIRRDERRLCNNCFDSKFAKVCVKCNQVIKTSSVQHAGSTYHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRERYAKRCGACHNLIEGNTKFVAYDEKYFHRECFTCCKCNKPLA-GEKFRIRDGEKICLPC 551 HSP 3 Score: 58.5362 bits (140), Expect = 2.938e-9 Identity = 52/185 (28.11%), Postives = 83/185 (44.86%), Query Frame = 1
Query: 355 LCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLK---SEGEFYHPYHFKCKTCLNEL-DRNFREKDGDFYCLRCFD 897
+C C F GE K+ + + FH KCF+C +C + + + + + R C + + FA C +CNQ I V A ++H+ CF + S F K E CQ CY + + G C+ +++G+ K + +++H F C C L FR +DG+ CL C D
Sbjct: 378 VCAACNGDFAPGEKKVGYQSKTFHDKCFICDECKQPIGSKQFIRRDERRLCNNCFDSKFAKVCVKCNQVIKTSSVQHA-GSTYHSECF-TCHHCDKPLAGSPFTKQEGRNVCQNCYRERYAKRCGA--CHN-----LIEGNTKFVAYDEKYFHRECFTCCKCNKPLAGEKFRIRDGEKICLPCDD 553 HSP 4 Score: 58.5362 bits (140), Expect = 3.234e-9 Identity = 57/244 (23.36%), Postives = 100/244 (40.98%), Query Frame = 1
Query: 340 ESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEG-RVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRN-FREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAM--GKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFC 1059
E+ + C C E G + + +H+ CF C+QC ++L E + ++ C I + C CN G + + ++H CF C C + + + ++ ER C C++ ++ C KC ++ ++ G YH F C C L + F +++G C C+ + C C +E + K +H E F C C+KP G ++ I + E C
Sbjct: 312 ENFANRCEACGEPIGPGSKDVDVRSKHWHEGCFKCSQCSKQLMNEGFTLKDEKLICHGCRGINPSKVCAACNGDFAPGEKKVGYQSKTFHDKCFICDECKQPIGSKQFIRRDERR-LCNNCFDSKFAKV-----CVKCN-QVIKTSSVQHAGSTYHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRERYAKRCGACHNLIEGNTKFVAYDEKYFHRECFTCCKCNKPLAGEKFRIRDGEKIC 548
BLAST of LIM domain-containing protein vs. Ensembl Nematostella
Match: EDO41100 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S5D2]) HSP 1 Score: 68.9366 bits (167), Expect = 1.444e-12 Identity = 77/301 (25.58%), Postives = 115/301 (38.21%), Query Frame = 1
Query: 340 ESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFI-LEGRVIKAIDHS-WHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDG--HLKSEGEFYHPYHFKCKTCLNELDRN-FREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRD-VGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVD 1224
E C C+E GE + N N +H F C C + + C +K +A C C+Q I E R I + D WH CF C C L + + E + C KCY V N C G I+ G L+ G F+H F+C C + + F KD F+C C+ C+ C P+ E + G+ +H F C FC + + + + + +C + K CE C + VG E + + + F C C L + + D
Sbjct: 226 ELQKSRCGGCDELIFTGEYTVAMNKN-WHLGHFQCQTCDHSITGRQFIVRGDKPVCTDCFKDSYAHECEACHQKIGPESRDISSDDDRHWHDKCFICDICRRPLKSEGSLHSTETKSCCNKCY--VANYQKECCAC----GQIIDSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGVLYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQCEICLKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGD 519 HSP 2 Score: 60.8474 bits (146), Expect = 6.146e-10 Identity = 51/193 (26.42%), Postives = 78/193 (40.41%), Query Frame = 1
Query: 322 LLNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGD-FYCLRCFD 897
+ N QKE CC C + + G ++ ++ N +H+ CF CA C E + + +CP Y+ F+ C C + +LEG V+ +WH +CF S+ F + YC +CY + C C IV + E +H F C C L ++GD C C D
Sbjct: 348 VANYQKE-----CCACGQIIDSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGVLYN-GETWHKACF-SCYFCHRSLASAAFSVRDGCRYCMECYGKFYAK-----QCEICLKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDELLCGDCAD 528 HSP 3 Score: 53.5286 bits (127), Expect = 1.304e-7 Identity = 70/290 (24.14%), Postives = 114/290 (39.31%), Query Frame = 1
Query: 358 CCHCEEAFNEGECKILFNN----NQFHKKCFVCAQCLEELEVELV-FQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFY-------CLRCFDKMGVPICSVCKRPVE---ERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFAC 1182
C C E ++ N FH CF C C EL VEL FQ+ +VYC + L C C++ I G A++ +WH F C +C S++ + ++ C C+ D H C C I + S + H +H KC C ++ R + +G + C +C+ C C + ++ R+ Y+ G +H F C+ C + S + + FC +Q K C C + + V + + + H CF+C
Sbjct: 167 CARCSHPILRSEPAVVAENIGAEASFHPGCFTCETC-NELLVELTYFQHADKVYCGRHFAELQKSRCGGCDELIFTGEYTVAMNKNWHLGHFQCQTCDHSITGRQFIVRGDK-PVCTDCFKDSY-----AHECEACHQKIGPESRDISSDDDRH-WHDKCFIC--DICRRPLKSEGSLHSTETKSCCNKCYVANYQKECCACGQIIDSGASRLEYS-GNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGVLYNGETW---HKACFSC 442
BLAST of LIM domain-containing protein vs. Ensembl Medaka
Match: lims2 (LIM and senescent cell antigen-like-containing domain protein 1 [Source:NCBI gene;Acc:101164852]) HSP 1 Score: 251.521 bits (641), Expect = 1.961e-79 Identity = 136/330 (41.21%), Postives = 196/330 (59.39%), Query Frame = 1
Query: 298 VNEVKDINLLNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLA 1287
+ E+ + N+ N N +C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L K +VD KP+CK C ++LP +++RLA
Sbjct: 4 IAEMTNGNMANALA---NAMCERCKSGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPDCFCCVICQAVLADVGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLLFKNDPYHPDHFNCNNCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCYHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKDKFVEVDLKPVCKHCYERLPDDMKRRLA 327
BLAST of LIM domain-containing protein vs. Ensembl Medaka
Match: lims2 (LIM and senescent cell antigen-like-containing domain protein 1 [Source:NCBI gene;Acc:101164852]) HSP 1 Score: 251.521 bits (641), Expect = 1.283e-78 Identity = 134/321 (41.74%), Postives = 190/321 (59.19%), Query Frame = 1
Query: 325 LNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLA 1287
N N +C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L K +VD KP+CK C ++LP +++RLA
Sbjct: 68 FNMANALANAMCERCKSGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPDCFCCVICQAVLADVGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLLFKNDPYHPDHFNCNNCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCYHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKDKFVEVDLKPVCKHCYERLPDDMKRRLA 385
BLAST of LIM domain-containing protein vs. Ensembl Medaka
Match: lims2 (LIM and senescent cell antigen-like-containing domain protein 1 [Source:NCBI gene;Acc:101164852]) HSP 1 Score: 242.662 bits (618), Expect = 2.094e-75 Identity = 130/313 (41.53%), Postives = 183/313 (58.47%), Query Frame = 1
Query: 325 LNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
N N +C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ YCL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C +C+R + + V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 68 FNMANALANAMCERCKSGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNNSWHPDCFCCVICQAVLADVGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDEQPLLFKNDPYHPDHFNCNNCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCYHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 377
BLAST of LIM domain-containing protein vs. Ensembl Medaka
Match: lims1 (LIM and senescent cell antigen-like-containing domain protein 1 [Source:NCBI gene;Acc:101155756]) HSP 1 Score: 236.884 bits (603), Expect = 6.768e-74 Identity = 127/305 (41.64%), Postives = 181/305 (59.34%), Query Frame = 1
Query: 349 NDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
+ +C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ +CL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ + C C+R + + V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 17 SAICERCKSGFAATEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNYSWHPDCFCCDICQAVLADVGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDELPLIFKNDPYHPDHFNCNNCGKELTADARELKGELFCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCYLCNRVIEGDVVSALNKAWCVSCFSCSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 318
BLAST of LIM domain-containing protein vs. Ensembl Medaka
Match: lims1 (LIM and senescent cell antigen-like-containing domain protein 1 [Source:NCBI gene;Acc:101155756]) HSP 1 Score: 226.483 bits (576), Expect = 5.539e-70 Identity = 127/316 (40.19%), Postives = 177/316 (56.01%), Query Frame = 1
Query: 316 INLLNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLP 1263
LN + +C C+ F E + N +H++CFVCAQC ++ L ++ EGR YC HD+++LFAP CH+C +FI+ GRVIKA+++SWH CF C C L++ K R+ C+ C+N K R G + C KC I+ + L + + YHP HF C C EL + RE G+ +CL C DKMGVPIC C+RP+E RV+ AMGK +HVEHFVC+ C KPFLG R++ +CE H+ V V L K +C+ F C C++ L +K + D KP+CK C +K P
Sbjct: 2 TGTLNISNALASAICERCKSGFAATEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFII-GRVIKAMNYSWHPDCFCCDICQAVLADVGFVKNAGRH-LCRPCHNREKARGLGKYICQKCHA-IIDELPLIFKNDPYHPDHFNCNNCGKELTADARELKGELFCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQCF---------SVTPSVVSALNKAWCVSCFSCSTCNTKLTLKNKFVEFDMKPVCKKCYEKFP 305
BLAST of LIM domain-containing protein vs. Planmine SMEST
Match: SMESG000066861.1 (SMESG000066861.1) HSP 1 Score: 672.544 bits (1734), Expect = 0.000e+0 Identity = 343/344 (99.71%), Postives = 344/344 (100.00%), Query Frame = 1
Query: 274 MTTTVLQNVNEVKDINLLNRQKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLAALHKSE 1305
MTTTVLQNVNEVKDINLLNRQKESHNDLCCHC+EAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFNCSSCGESLSNSSTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLAALHKSE
Sbjct: 1 MTTTVLQNVNEVKDINLLNRQKESHNDLCCHCDEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFNCSSCGESLSNSSTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLAALHKSE 344
BLAST of LIM domain-containing protein vs. Planmine SMEST
Match: SMESG000011768.1 (SMESG000011768.1) HSP 1 Score: 283.108 bits (723), Expect = 1.332e-91 Identity = 148/337 (43.92%), Postives = 205/337 (60.83%), Query Frame = 1
Query: 301 NEVKDINLLNR--QKESHNDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKLPHHLRKRLAALHKSE 1305
N++ N L + K S C HC+ F E + + Q+H CFVCAQC + + ++ + YC HD+ +LFAP C C +FI+ GRVIKA+ +WHA CF C C LS+S K R A C+ C K G + C KC I + HLK + EF+HPYHF C C EL + REKDG+ YCLRC DKMG+ IC C+RP+EERV++A+GKA+HVEHFVC+ C KPFLGSR++ +CELH+Q + + C C++ + E+V+ L K +C+ HF C+ C+ ++ ++K Y+ D KP+CK C + P LRKR+A LHK E
Sbjct: 26 NDLDSANSLKKLCNKISDGSFCYHCDGPFELNEKVVQVGDYQWHTSCFVCAQCFQTFPNGIFYEFGDKKYCEHDFHVLFAPCCGSCGEFII-GRVIKAMGSNWHADCFRCQLCSVVLSDSGFVKNLGR-ALCKTCNATEKAGSSGRYICNKCHTVIEENKHLKYKLEFFHPYHFSCHNCSIELTADAREKDGELYCLRCHDKMGIAICGACRRPIEERVVHALGKAWHVEHFVCARCEKPFLGSRHYEKKGLAYCELHYQQLFGQLCFICNQVISGETVQALSKAWCINHFDCYVCNKKMSQNTKFYEFDMKPVCKGCYEHFPAELRKRIAKLHKLE 360
BLAST of LIM domain-containing protein vs. Planmine SMEST
Match: SMESG000037769.1 (SMESG000037769.1) HSP 1 Score: 79.7221 bits (195), Expect = 1.305e-15 Identity = 78/310 (25.16%), Postives = 125/310 (40.32%), Query Frame = 1
Query: 358 CCHCEEAFNEGECKILFNNNQ-----FHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDG-HLKSEGEFYHPYHFKCKTCLNEL-DRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEE--RVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKL 1260
C C+ + E + ++N+ +H CF C++C E L + + ++YC Y P C C++ I +A+D H + F C +C SL+ K E N +C KCY + C +CK I D L + +H F+C C L DR F KD +C C+D C C + + R GK +H E F+C C +P + ++++ C ++ + C C + + V + + + F C C L K D KP C C +L
Sbjct: 170 CFECKTTIGKSELSVRIDHNESGAHSWHPACFNCSECKELLVDYIYCWHLNKLYCARHYGEKIRPRCATCDELIFNEEYTRAMDQEHHPNHFACKNCDNSLTGHRYILK-EENPHCIKCY-----ETKFANTCEQCKEKIGCDSKDLSFKDRHWHEKCFECFECHTSLVDRPFATKDESLFCSECYDNKFAARCDGCTKVFKAGMRKYEYRGKQWHEECFLCLECKQPIGAKSFIPRDQQIICVPCYENKYAQKCSKCTEVIRRGGVTYKGTPWHKECFTCTNCTKQLA-GIKFTSKDDKPYCADCYGEL 472 HSP 2 Score: 67.781 bits (164), Expect = 7.130e-12 Identity = 58/242 (23.97%), Postives = 96/242 (39.67%), Query Frame = 1
Query: 352 DLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEG-RVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDR-NFREKDGDFYCLRCFDKMGVPICSVCKRPVEE----RVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFC 1059
+ C C+E + F + +H+KCF C +C L + ++C Y FA C C + G R + WH CF C C + + +F ++ C CY + C KC ++ G + +G +H F C C +L F KD YC C+ ++ C+ C +P+ + I G+ +H E F CS C+ +G + + + C
Sbjct: 294 NTCEQCKEKIGCDSKDLSFKDRHWHEKCFECFECHTSLVDRPFATKDESLFCSECYDNKFAARCDGCTKVFKAGMRKYEYRGKQWHEECFLCLECKQPIGAK-SFIPRDQQIICVPCYENKY-----AQKCSKCT-EVIRRGGVTYKGTPWHKECFTCTNCTKQLAGIKFTSKDDKPYCADCYGELFAKKCTKCTKPITGFGGCKFISFEGRHWHSECFTCSKCTTNLVGRGFLTNEDNIMC 528 HSP 3 Score: 58.9214 bits (141), Expect = 5.275e-9 Identity = 67/283 (23.67%), Postives = 114/283 (40.28%), Query Frame = 1
Query: 358 CCHCEE-AFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFI-LEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKG--PIVLDGHLKSE--GEFYHPYHFKCKTCLNELD-RNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDV-GKESVEFLKKVYCLQHFRCFAC 1182
C C+E FNE + + + + H F C C L E +C Y+ FA C +C + I + + + D WH CF C C SL + F + + +C +CY++ + +C G + G K E G+ +H F C C + ++F +D C+ C++ CS C + + G +H E F C+ C+K G ++ + + +C + + K C C + + G +F+ H CF C
Sbjct: 236 CATCDELIFNEEYTRAM--DQEHHPNHFACKNCDNSLTGHRYILKEENPHCIKCYETKFANTCEQCKEKIGCDSKDLSFKDRHWHEKCFECFECHTSLVDR-PFATKDESLFCSECYDN--------KFAARCDGCTKVFKAGMRKYEYRGKQWHEECFLCLECKQPIGAKSFIPRDQQIICVPCYENKYAQKCSKCTEVIRRGGVTYKGTPWHKECFTCTNCTKQLAGIKFTSKDDKPYCADCYGELFAKKCTKCTKPITGFGGCKFISFEGRHWHSECFTC 507 HSP 4 Score: 57.3806 bits (137), Expect = 1.615e-8 Identity = 49/182 (26.92%), Postives = 77/182 (42.31%), Query Frame = 1
Query: 358 CCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLK---SEGEFYHPYHFKCKTCLNEL-DRNFREKDGDFYCLRC 891
C C + F G K + Q+H++CF+C +C + + + + ++ C Y+ +A C +C + I G V WH CF C++C + L+ F + YC CY ++ + C KC PI G K EG +H F C C L R F + + C C
Sbjct: 357 CDGCTKVFKAGMRKYEYRGKQWHEECFLCLECKQPIGAKSFIPRDQQIICVPCYENKYAQKCSKCTEVIRRGGVTYK-GTPWHKECFTCTNCTKQLAGIK-FTSKDDKPYCADCYGELFAK-----KCTKCTKPITGFGGCKFISFEGRHWHSECFTCSKCTTNLVGRGFLTNEDNIMCPDC 531
BLAST of LIM domain-containing protein vs. Planmine SMEST
Match: SMESG000004969.1 (SMESG000004969.1) HSP 1 Score: 77.0258 bits (188), Expect = 7.574e-15 Identity = 72/286 (25.17%), Postives = 121/286 (42.31%), Query Frame = 1
Query: 421 FHKKCFVCAQCLEELEVELVFQN-EGRVYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYN-DVKNRIPGVHYCYKCKGPIVLDG-HLKSEGEFYHPYHFKCKTCLNELDRN-FREKDGDFYCLRCFDKMGVPICSVCKRPVEE--RVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKL 1260
+H +CF C C +EL V+ ++ + ++YC Y P C C++ I I+A D+ +H + F ++ + ++ + + A C +CYN ++ N+ C KC I D L +H F C C L+ N F + YC+ C +P C C RP+E ++I K +H F C C +P + +K C F K C C + V + + + + Y F C C + D+ + K + + CK C +L
Sbjct: 185 WHLECFKCTSC-QELLVDYIYASYNQKLYCIRHYAKNIRPRCSECDELIFSVEYIRAGDNEFHLNHF-ACYICDASLSKQSYLQHKGFATCIQCYNHELSNK------CVKCSKQISCDSKDLSYNNNHWHSDCFMCSICNKNLEGNQFLYLNELLYCVNCHQDKILPKCISCDRPIENGAKMICFDEKNWHFNCFNCKDCKRPIGNDSFVQQDKRSICSKCFDAKYAKRCAKCEKLVKEGGISYKNQSYHYDCFNCANCKCRIADTKFLVK-NNENYCKVCCDRL 461 HSP 2 Score: 65.0846 bits (157), Expect = 4.829e-11 Identity = 66/269 (24.54%), Postives = 118/269 (43.87%), Query Frame = 1
Query: 400 ILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCN-QFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKS-EGEFYHPYHFKCKTCLNEL-DRNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDVGKES----VEFLKKVYCLQHFRCFACD 1185
I +N+FH F C C L + Q++G C Y + C +C+ Q + + + ++ WH+ CF CS C ++L + F YC C+ D +P C C PI + + + +H F CK C + + +F ++D C +CFD C+ C++ V+E I ++YH + F C+ C +++ + N E +C++ + C+ C + + ++ + F K + H CF CD
Sbjct: 238 IRAGDNEFHLNHFACYICDASLSKQSYLQHKGFATCIQCYNHELSNKCVKCSKQISCDSKDLSYNNNHWHSDCFMCSICNKNLEGN-QFLYLNELLYCVNCHQD--KILPK---CISCDRPIENGAKMICFDEKNWHFNCFNCKDCKRPIGNDSFVQQDKRSICSKCFDAKYAKRCAKCEKLVKEGGISYKNQSYHYDCFNCANCKCRIADTKFLVKNNENYCKVCCDRLFSTRCKKCTKPITGDAICKYISFEDKNW---HVGCFNCD 497
BLAST of LIM domain-containing protein vs. Planmine SMEST
Match: SMESG000009923.1 (SMESG000009923.1) HSP 1 Score: 75.485 bits (184), Expect = 2.982e-14 Identity = 87/345 (25.22%), Postives = 159/345 (46.09%), Query Frame = 1
Query: 271 RMTTTVLQNVNEVKDINLLN---RQKESHNDLCCHCEEAFNEGE--CKILFNNNQF--HKKCFVCAQCLEEL-EVELVFQNEGR-VYCPHDYKILFAPACHRCNQFILEGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEF-YHPYHFKCKTCLNEL-DRNFREKDGDFYCLRCFDKMGVPICSVCK---RPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIH-NKEVFCELHFQMMTMKFCEYCHRDVGKESVEFLKKVYCLQHFRCFACDSLLNDSSKIYKVDRKPICKPCLQKL 1260
++ + + + +D N L + + ++C C++ F + + C + ++ +F H CF C C E+L + + N+ + ++C + L C C++ I+ KA+D +H F C C SL+ + + + N +C KC+ +N+ C+KC I D S E+ +H F C C + L DR+F KD YC CFD+ C C R ++ YA GK +H + F+C+ C++ +G++ FI N ++ C ++ + C C + K + + + + F C +C +L++ SK + KP C C +L
Sbjct: 146 KLIVQLARAFKKSRDTNYLGFGEIEPVDNQEVCSICDKQFEDEDIFCIRITHSAEFASHISCFECKTCKEKLVDFHYCWSNDSKAIFCLRHFGELTYCRCAECDELIVNKDFTKAMDQEFHVEHFACHVCDSSLTGTKYILR-DDNPFCVKCF---ENQFGNT--CHKCSEKISCDSKDLSFKEWHWHEKCFLCDICHDSLVDRSFTTKDNYLYCPNCFDEKFSSCCDGCGKIFRTGVKKYEYA-GKQWHEDCFICADCNQS-IGTKSFIPINGKISCIGCYENKHAQKCFKCSEIIRKSGITYKGDPWHKECFLCTSCQKMLSE-SKFTSKEEKPYCTECFIEL 481 HSP 2 Score: 65.4698 bits (158), Expect = 4.125e-11 Identity = 58/243 (23.87%), Postives = 98/243 (40.33%), Query Frame = 1
Query: 349 NDLCCHCEEAFNEGECKILFNNNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFILEG-RVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSEGEFYHPYHFKCKTCLNELDRN-FREKDGDFYCLRCFDKMGVPICSVCKRPVEE----RVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFC 1059
+ C C E + + F +H+KCF+C C + L + +YCP+ + F+ C C + G + + WH CF C+ C +S+ +F C CY + C+KC I+ + +G+ +H F C +C L + F K+ YC CF ++ C C +P+ + I +H E F CS C +G +F+ ++ C
Sbjct: 302 GNTCHKCSEKISCDSKDLSFKEWHWHEKCFLCDICHDSLVDRSFTTKDNYLYCPNCFDEKFSSCCDGCGKIFRTGVKKYEYAGKQWHEDCFICADCNQSIGTK-SFIPINGKISCIGCYEN-----KHAQKCFKC-SEIIRKSGITYKGDPWHKECFLCTSCQKMLSESKFTSKEEKPYCTECFIELFCKRCKKCTQPISGFGGCKFISVGDDHWHTECFNCSKCQASMVGKGFFLQEDQMVC 537 HSP 3 Score: 52.373 bits (124), Expect = 5.698e-7 Identity = 61/262 (23.28%), Postives = 107/262 (40.84%), Query Frame = 1
Query: 412 NNQFHKKCFVCAQCLEELEVELVFQNEGRVYCPHDYKILFAPACHRCNQFIL-EGRVIKAIDHSWHASCFXXXXXXXXXXXXXTFKKFERNAYCQKCYNDVKNRIPGVHYCYKCKGPIVLDGHLKSE--GEFYHPYHFKCKTCLNELD-RNFREKDGDFYCLRCFDKMGVPICSVCKRPVEERVIYAMGKAYHVEHFVCSFCSKPFLGSRYFIHNKEVFCELHFQMMTMKFCEYCHRDV-GKESVEFLKKVYCLQHFRCFAC 1182
+ +FH + F C C L + +C ++ F CH+C++ I + + + + WH CF C C +SL + +F + YC C+++ C G I G K E G+ +H F C C + ++F +G C+ C++ C C + + I G +H E F+C+ C K S++ ++ +C F + K C+ C + + G +F+ H CF C
Sbjct: 262 DQEFHVEHFACHVCDSSLTGTKYILRDDNPFCVKCFENQFGNTCHKCSEKISCDSKDLSFKEWHWHEKCFLCDICHDSLVDR-SFTTKDNYLYCPNCFDE------KFSSCCDGCGKIFRTGVKKYEYAGKQWHEDCFICADCNQSIGTKSFIPINGKISCIGCYENKHAQKCFKCSEIIRKSGITYKGDPWHKECFLCTSCQKMLSESKFTSKEEKPYCTECFIELFCKRCKKCTQPISGFGGCKFISVGDDHWHTECFNC 516 The following BLAST results are available for this feature:
BLAST of LIM domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of LIM domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of LIM domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of LIM domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of LIM domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of LIM domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of LIM domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of LIM domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of LIM domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of LIM domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of LIM domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of LIM domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of LIM domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of LIM domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30019455 ID=SMED30019455|Name=LIM domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1438bpback to top protein sequence of SMED30019455-orf-1 >SMED30019455-orf-1 ID=SMED30019455-orf-1|Name=SMED30019455-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=345bp MTTTVLQNVNEVKDINLLNRQKESHNDLCCHCEEAFNEGECKILFNNNQFback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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