SMED30019431

Overview


Name	SMED30019431
Smed ID	SMED30019431
Length (bp)	1983

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of SMED30019431 (SMED30019431) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30019431 (SMED30019431) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30019431 (SMED30019431) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30019431 (SMED30019431) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30019431

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
nervous system	SMED30019431	h1SMcG0018681	dd_Smed_v4_9738_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30019431	h1SMcG0018681	dd_Smed_v4_9738_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30019431	h1SMcG0018681	dd_Smed_v4_9738_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cilated neuron	SMED30019431	h1SMcG0018681	dd_Smed_v4_9738_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of SMED30019431 vs. Ensembl Human
Match: DBP (D-box binding PAR bZIP transcription factor [Source:HGNC Symbol;Acc:HGNC:2697])

HSP 1 Score: 59.3066 bits (142), Expect = 4.340e-10
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 1

Query: 1078 TPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
             P+E K E+YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  V+ ++   + +LS
Sbjct:   47 VPEEQKDEKYWSRRYKNNEAAKRSRDARRLKENQISVRAAFLEKENALLRQEVVAVRQELSHYRAVLS 114

[Close]

Query: 1078 TPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
             P+E K E+YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  V+ ++   + +LS
Sbjct:   47 VPEEQKDEKYWSRRYKNNEAAKRSRDARRLKENQISVRAAFLEKENALLRQEVVAVRQELSHYRAVLS 114

[Close]

BLAST of SMED30019431 vs. Ensembl Human
Match: DBP (D-box binding PAR bZIP transcription factor [Source:HGNC Symbol;Acc:HGNC:2697])

HSP 1 Score: 60.8474 bits (146), Expect = 2.464e-9
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 1

Query: 1078 TPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
             P+E K E+YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  V+ ++   + +LS
Sbjct:  249 VPEEQKDEKYWSRRYKNNEAAKRSRDARRLKENQISVRAAFLEKENALLRQEVVAVRQELSHYRAVLS 316

[Close]

BLAST of SMED30019431 vs. Ensembl Human
Match: HLF (HLF transcription factor, PAR bZIP family member [Source:HGNC Symbol;Acc:HGNC:4977])

HSP 1 Score: 59.3066 bits (142), Expect = 2.664e-9
Identity = 38/100 (38.00%), Postives = 54/100 (54.00%), Query Frame = 1

Query:  982 EMLEKIKLKFGHIFENCNTTISNPRMVRHPDMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
            EM +  K KF          I   R V  PD    +LK ++YW +RRKNN AAKRSR+ARR KE  +      L+ EN  +R+E+  ++ ++   K IL+
Sbjct:  106 EMFDPRKRKFSEEELKPQPMIKKARKVFIPD----DLKDDKYWARRRKNNMAAKRSRDARRLKENQIAIRASFLEKENSALRQEVADLRKELGKCKNILA 201

[Close]

Query:  982 EMLEKIKLKFGHIFENCNTTISNPRMVRHPDMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
            EM +  K KF          I   R V  PD    +LK ++YW +RRKNN AAKRSR+ARR KE  +      L+ EN  +R+E+  ++ ++   K IL+
Sbjct:  106 EMFDPRKRKFSEEELKPQPMIKKARKVFIPD----DLKDDKYWARRRKNNMAAKRSRDARRLKENQIAIRASFLEKENSALRQEVADLRKELGKCKNILA 201

[Close]

BLAST of SMED30019431 vs. Ensembl Celegans
Match: ces-2 (Cell death specification protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94126])

HSP 1 Score: 60.077 bits (144), Expect = 5.807e-10
Identity = 28/66 (42.42%), Postives = 47/66 (71.21%), Query Frame = 1

Query: 1081 PKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKIL 1278
            P+E K   Y+E+RRKNN+AAKRSR+ARRQKEE + +    L+ EN ++R ++ +++ +   ++ +L
Sbjct:  111 PEEKKDSAYFERRRKNNDAAKRSRDARRQKEEQIASKAHALERENMQLRGKVSSLEQEAAQLRFLL 176

[Close]

BLAST of SMED30019431 vs. Ensembl Celegans
Match: atf-8 (ATF (cAMP-dependent transcription factor) family [Source:UniProtKB/TrEMBL;Acc:O16213])

HSP 1 Score: 54.299 bits (129), Expect = 6.090e-8
Identity = 26/75 (34.67%), Postives = 48/75 (64.00%), Query Frame = 1

Query: 1087 ELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS*S*ITAPSDT 1311
            ++K   YWE+RRKNN+AAKRSR+ RR KE+ + +    L+ EN  +R E++ ++ +   ++ ++    +T P+ +
Sbjct:  113 QVKDVAYWERRRKNNDAAKRSRDQRRMKEDEMAHRATSLERENMLLRVELDQLRAETDKLRALI----LTTPTTS 183

[Close]

BLAST of SMED30019431 vs. Ensembl Celegans
Match: atf-2 (ATF (cAMP-dependent transcription factor) family [Source:UniProtKB/TrEMBL;Acc:Q21361])

HSP 1 Score: 51.6026 bits (122), Expect = 1.136e-6
Identity = 26/63 (41.27%), Postives = 41/63 (65.08%), Query Frame = 1

Query: 1093 KTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
            K+ +Y ++RR+NNEAAKR R  RR   E  +   + L+ EN+ +R +IET+K +I   K +L+
Sbjct:  328 KSPQYVDRRRRNNEAAKRCRANRRAVFEYRSRRVQLLEGENEDLRTQIETLKAEIAHFKSVLA 390

HSP 2 Score: 49.6766 bits (117), Expect = 4.285e-6
Identity = 21/54 (38.89%), Postives = 36/54 (66.67%), Query Frame = 1

Query: 1090 LKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKL 1251
            +K E YWE+RR+NN+A++RSRE RRQ +  +      L  EN++++ ++ T  +
Sbjct:   52 IKDEHYWERRRRNNDASRRSREKRRQNDLAMEEKIMLLSAENERLKSQLGTTPI 105

[Close]

BLAST of SMED30019431 vs. Ensembl Fly
Match: Pdp1 (gene:FBgn0016694 transcript:FBtr0332081)

HSP 1 Score: 63.1586 bits (152), Expect = 1.350e-10
Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 1

Query: 1075 MTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
              P ELK ++YW +RRKNN AAKRSR+ARRQKE  +      L+ EN  + +E+E +K +  D++  LS
Sbjct:  202 FVPDELKDDKYWARRRKNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQLKQENMDLRARLS 270

[Close]

BLAST of SMED30019431 vs. Ensembl Fly
Match: Pdp1 (gene:FBgn0016694 transcript:FBtr0076775)

HSP 1 Score: 62.7734 bits (151), Expect = 1.353e-10
Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 1

Query: 1075 MTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
              P ELK ++YW +RRKNN AAKRSR+ARRQKE  +      L+ EN  + +E+E +K +  D++  LS
Sbjct:  177 FVPDELKDDKYWARRRKNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQLKQENMDLRARLS 245

[Close]

BLAST of SMED30019431 vs. Ensembl Fly
Match: Pdp1 (gene:FBgn0016694 transcript:FBtr0076776)

HSP 1 Score: 63.1586 bits (152), Expect = 1.363e-10
Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 1

Query: 1075 MTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
              P ELK ++YW +RRKNN AAKRSR+ARRQKE  +      L+ EN  + +E+E +K +  D++  LS
Sbjct:  197 FVPDELKDDKYWARRRKNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQLKQENMDLRARLS 265

[Close]

BLAST of SMED30019431 vs. Ensembl Fly
Match: Pdp1 (gene:FBgn0016694 transcript:FBtr0346536)

HSP 1 Score: 63.1586 bits (152), Expect = 1.363e-10
Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 1

Query: 1075 MTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
              P ELK ++YW +RRKNN AAKRSR+ARRQKE  +      L+ EN  + +E+E +K +  D++  LS
Sbjct:  197 FVPDELKDDKYWARRRKNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQLKQENMDLRARLS 265

[Close]

BLAST of SMED30019431 vs. Ensembl Fly
Match: Pdp1 (gene:FBgn0016694 transcript:FBtr0306535)

HSP 1 Score: 63.1586 bits (152), Expect = 1.363e-10
Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 1

Query: 1075 MTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
              P ELK ++YW +RRKNN AAKRSR+ARRQKE  +      L+ EN  + +E+E +K +  D++  LS
Sbjct:  197 FVPDELKDDKYWARRRKNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQLKQENMDLRARLS 265

[Close]

BLAST of SMED30019431 vs. Ensembl Zebrafish
Match: dbpb (D site albumin promoter binding protein b [Source:ZFIN;Acc:ZDB-GENE-100922-6])

HSP 1 Score: 60.8474 bits (146), Expect = 2.447e-9
Identity = 29/68 (42.65%), Postives = 46/68 (67.65%), Query Frame = 1

Query: 1075 MTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKIL 1278
            + P++LK E+YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  ++ ++   + IL
Sbjct:  297 LVPEDLKDEKYWSRRCKNNEAAKRSRDARRLKENQISVRAAFLERENAALRQEVADMRKELGRCRNIL 364

[Close]

BLAST of SMED30019431 vs. Ensembl Zebrafish
Match: dbpb (D site albumin promoter binding protein b [Source:ZFIN;Acc:ZDB-GENE-100922-6])

HSP 1 Score: 60.4622 bits (145), Expect = 2.502e-9
Identity = 29/68 (42.65%), Postives = 46/68 (67.65%), Query Frame = 1

Query: 1075 MTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKIL 1278
            + P++LK E+YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  ++ ++   + IL
Sbjct:  296 LVPEDLKDEKYWSRRCKNNEAAKRSRDARRLKENQISVRAAFLERENAALRQEVADMRKELGRCRNIL 363

[Close]

BLAST of SMED30019431 vs. Ensembl Zebrafish
Match: dbpb (D site albumin promoter binding protein b [Source:ZFIN;Acc:ZDB-GENE-100922-6])

HSP 1 Score: 60.4622 bits (145), Expect = 2.592e-9
Identity = 29/68 (42.65%), Postives = 46/68 (67.65%), Query Frame = 1

Query: 1075 MTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKIL 1278
            + P++LK E+YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  ++ ++   + IL
Sbjct:  296 LVPEDLKDEKYWSRRCKNNEAAKRSRDARRLKENQISVRAAFLERENAALRQEVADMRKELGRCRNIL 363

[Close]

BLAST of SMED30019431 vs. Ensembl Zebrafish
Match: hlfb (HLF transcription factor, PAR bZIP family member b [Source:ZFIN;Acc:ZDB-GENE-110420-3])

HSP 1 Score: 58.5362 bits (140), Expect = 8.750e-9
Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 1

Query: 1081 PKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
            P +LK E+YW +RRKNN AAKRSR+ARR KE  +      L+ EN  +R+E+  ++ ++   K IL+
Sbjct:  224 PDDLKDEKYWARRRKNNVAAKRSRDARRLKENQIAIRAGFLEKENMALRQEVADLRKELGRCKNILT 290

[Close]

BLAST of SMED30019431 vs. Ensembl Zebrafish
Match: si:dkey-60d5.3 (si:dkey-60d5.3 [Source:ZFIN;Acc:ZDB-GENE-131127-467])

HSP 1 Score: 57.3806 bits (137), Expect = 1.689e-8
Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 1

Query: 1036 TTISNPRMVRHPDMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETV 1245
            T ++N    R  + TP ELK   YW KR +NNEAAK+SR+ +R +E  L     +LQ ENDK++  +  V
Sbjct:   30 TRLANTGTRRKREFTPDELKDSNYWLKRNRNNEAAKKSRQRKRMEEHLLETRAVELQRENDKLKAALSAV 99

[Close]

BLAST of SMED30019431 vs. Ensembl Xenopus
Match: mbd2 (methyl-CpG binding domain protein 2 [Source:Xenbase;Acc:XB-GENE-493776])

HSP 1 Score: 59.6918 bits (143), Expect = 2.517e-10
Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 1

Query: 1078 TPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
             P+E K E+YW +R KNNEAAKRSR+ARR KE  +T     L+ EN  +R+E+  ++ ++   + ILS
Sbjct:   43 VPEEQKDEKYWNRRYKNNEAAKRSRDARRLKENQITVRAAFLEKENSVLRQEVAKIRQELSRYRNILS 110

[Close]

BLAST of SMED30019431 vs. Ensembl Xenopus
Match: mbd2 (methyl-CpG binding domain protein 2 [Source:Xenbase;Acc:XB-GENE-493776])

HSP 1 Score: 61.2326 bits (147), Expect = 1.570e-9
Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 1

Query: 1078 TPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
             P+E K E+YW +R KNNEAAKRSR+ARR KE  +T     L+ EN  +R+E+  ++ ++   + ILS
Sbjct:  235 VPEEQKDEKYWNRRYKNNEAAKRSRDARRLKENQITVRAAFLEKENSVLRQEVAKIRQELSRYRNILS 302

[Close]

BLAST of SMED30019431 vs. Ensembl Xenopus
Match: mga (MGA, MAX dimerization protein [Source:Xenbase;Acc:XB-GENE-492360])

HSP 1 Score: 59.3066 bits (142), Expect = 5.535e-9
Identity = 29/68 (42.65%), Postives = 44/68 (64.71%), Query Frame = 1

Query: 1078 TPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
             P++LK E+YW +R KNN AAKRSR+ARR KE  +T     L+ EN  +R E+  ++ ++   + I+S
Sbjct:  214 VPEDLKDEKYWTRRNKNNVAAKRSRDARRLKENQITVRAAFLEKENSALRSEVADLRKELSKCRNIIS 281

[Close]

BLAST of SMED30019431 vs. Ensembl Xenopus
Match: mga (MGA, MAX dimerization protein [Source:Xenbase;Acc:XB-GENE-492360])

HSP 1 Score: 58.9214 bits (141), Expect = 6.753e-9
Identity = 29/68 (42.65%), Postives = 44/68 (64.71%), Query Frame = 1

Query: 1078 TPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
             P++LK E+YW +R KNN AAKRSR+ARR KE  +T     L+ EN  +R E+  ++ ++   + I+S
Sbjct:  203 VPEDLKDEKYWTRRNKNNVAAKRSRDARRLKENQITVRAAFLEKENSALRSEVADLRKELSKCRNIIS 270

[Close]

BLAST of SMED30019431 vs. Ensembl Xenopus
Match: chm (choroideremia (Rab escort protein 1) [Source:Xenbase;Acc:XB-GENE-956389])

HSP 1 Score: 55.0694 bits (131), Expect = 2.001e-7
Identity = 28/66 (42.42%), Postives = 40/66 (60.61%), Query Frame = 1

Query: 1072 DMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIK 1269
            + TP E K + YW+KRRKNNEAAKRSRE RR  +  L      L  EN ++R E+  ++ +   ++
Sbjct:   80 EFTPDEKKDDCYWDKRRKNNEAAKRSREKRRAGDLALEGRVIALLEENARLRAELLALRFRFGLVR 145

[Close]

BLAST of SMED30019431 vs. Ensembl Mouse
Match: Dbp (D site albumin promoter binding protein [Source:MGI Symbol;Acc:MGI:94866])

HSP 1 Score: 59.6918 bits (143), Expect = 9.126e-10
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 1

Query: 1078 TPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
             P+E K E+YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  V+ ++   + +LS
Sbjct:  112 VPEEQKDEKYWSRRYKNNEAAKRSRDARRLKENQISVRAAFLEKENALLRQEVVAVRQELSHYRAVLS 179

[Close]

BLAST of SMED30019431 vs. Ensembl Mouse
Match: Dbp (D site albumin promoter binding protein [Source:MGI Symbol;Acc:MGI:94866])

HSP 1 Score: 59.6918 bits (143), Expect = 1.374e-9
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 1

Query: 1078 TPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
             P+E K E+YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  V+ ++   + +LS
Sbjct:  149 VPEEQKDEKYWSRRYKNNEAAKRSRDARRLKENQISVRAAFLEKENALLRQEVVAVRQELSHYRAVLS 216

[Close]

BLAST of SMED30019431 vs. Ensembl Mouse
Match: Dbp (D site albumin promoter binding protein [Source:MGI Symbol;Acc:MGI:94866])

HSP 1 Score: 60.8474 bits (146), Expect = 2.007e-9
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 1

Query: 1078 TPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
             P+E K E+YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  V+ ++   + +LS
Sbjct:  249 VPEEQKDEKYWSRRYKNNEAAKRSRDARRLKENQISVRAAFLEKENALLRQEVVAVRQELSHYRAVLS 316

[Close]

BLAST of SMED30019431 vs. Ensembl Mouse
Match: Hlf (hepatic leukemia factor [Source:MGI Symbol;Acc:MGI:96108])

HSP 1 Score: 59.6918 bits (143), Expect = 3.729e-9
Identity = 38/100 (38.00%), Postives = 54/100 (54.00%), Query Frame = 1

Query:  982 EMLEKIKLKFGHIFENCNTTISNPRMVRHPDMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
            EM +  K KF          I   R V  PD    +LK ++YW +RRKNN AAKRSR+ARR KE  +      L+ EN  +R+E+  ++ ++   K IL+
Sbjct:  191 EMFDPRKRKFSEEELKPQPMIKKARKVFIPD----DLKDDKYWARRRKNNMAAKRSRDARRLKENQIAIRASFLEKENSALRQEVADLRKELGKCKNILA 286

[Close]

BLAST of SMED30019431 vs. Ensembl Mouse
Match: Tef (thyrotroph embryonic factor [Source:MGI Symbol;Acc:MGI:98663])

HSP 1 Score: 58.5362 bits (140), Expect = 8.072e-9
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 1

Query: 1075 MTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
              P E K E+YW +R+KNN AAKRSR+ARR KE  +T     L+ EN  +R E+  ++ ++   K I+S
Sbjct:  224 FVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVS 292

[Close]

BLAST of SMED30019431 vs. UniProt/SwissProt
Match: sp|Q94126|CES2_CAEEL (Cell death specification protein 2 OS=Caenorhabditis elegans OX=6239 GN=ces-2 PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 7.386e-9
Identity = 28/66 (42.42%), Postives = 47/66 (71.21%), Query Frame = 1

Query: 1081 PKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKIL 1278
            P+E K   Y+E+RRKNN+AAKRSR+ARRQKEE + +    L+ EN ++R ++ +++ +   ++ +L
Sbjct:  111 PEEKKDSAYFERRRKNNDAAKRSRDARRQKEEQIASKAHALERENMQLRGKVSSLEQEAAQLRFLL 176

[Close]

BLAST of SMED30019431 vs. UniProt/SwissProt
Match: sp|Q10586|DBP_HUMAN (D site-binding protein OS=Homo sapiens OX=9606 GN=DBP PE=1 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 1.183e-8
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 1

Query: 1078 TPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
             P+E K E+YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  V+ ++   + +LS
Sbjct:  249 VPEEQKDEKYWSRRYKNNEAAKRSRDARRLKENQISVRAAFLEKENALLRQEVVAVRQELSHYRAVLS 316

[Close]

BLAST of SMED30019431 vs. UniProt/SwissProt
Match: sp|Q32PF6|DBP_BOVIN (D site-binding protein OS=Bos taurus OX=9913 GN=DBP PE=2 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 1.283e-8
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 1

Query: 1078 TPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
             P+E K E+YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  V+ ++   + +LS
Sbjct:  249 VPEEQKDEKYWSRRYKNNEAAKRSRDARRLKENQISVRAAFLEKENALLRQEVVAVRQELSHYRAVLS 316

[Close]

BLAST of SMED30019431 vs. UniProt/SwissProt
Match: sp|P16443|DBP_RAT (D site-binding protein OS=Rattus norvegicus OX=10116 GN=Dbp PE=1 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 1.391e-8
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 1

Query: 1078 TPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
             P+E K E+YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  V+ ++   + +LS
Sbjct:  249 VPEEQKDEKYWSRRYKNNEAAKRSRDARRLKENQISVRAAFLEKENALLRQEVVAVRQELSHYRAVLS 316

[Close]

BLAST of SMED30019431 vs. UniProt/SwissProt
Match: sp|Q60925|DBP_MOUSE (D site-binding protein OS=Mus musculus OX=10090 GN=Dbp PE=1 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 1.404e-8
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 1

Query: 1078 TPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
             P+E K E+YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  V+ ++   + +LS
Sbjct:  249 VPEEQKDEKYWSRRYKNNEAAKRSRDARRLKENQISVRAAFLEKENALLRQEVVAVRQELSHYRAVLS 316

[Close]

BLAST of SMED30019431 vs. TrEMBL
Match: A0A0N4V3E6 (BZIP domain-containing protein OS=Enterobius vermicularis OX=51028 GN=EVEC_LOCUS4278 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.713e-10
Identity = 35/75 (46.67%), Postives = 49/75 (65.33%), Query Frame = 1

Query: 1057 MVRHPDMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
            M + P   P ELK E Y E+R KNNE+A+RSRE RRQKEE     C+ L  EN+ +R E+  ++ Q+  +K++LS
Sbjct:   98 MKKKPTPVPDELKDEAYRERRMKNNESARRSREMRRQKEESTQRRCDQLMHENNLLRAELSLLRSQVDHLKQVLS 172

[Close]

BLAST of SMED30019431 vs. TrEMBL
Match: A0A0N4V5J4 (BZIP domain-containing protein OS=Enterobius vermicularis OX=51028 GN=EVEC_LOCUS5117 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.738e-10
Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 1

Query: 1063 RHPDMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKIL 1278
            RH    P+E K E Y+E+RRKNN+AAKRSR+ARRQKEE +      L+ EN ++R +IE +K +I  ++ +L
Sbjct:  105 RHAAPVPQEKKDEAYYERRRKNNDAAKRSRDARRQKEELIAAKAAFLEQENIRLRSQIELLKNEIAALRVML 176

[Close]

BLAST of SMED30019431 vs. TrEMBL
Match: A0A0N5A9E1 (BZIP domain-containing protein OS=Syphacia muris OX=451379 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.629e-9
Identity = 35/71 (49.30%), Postives = 45/71 (63.38%), Query Frame = 1

Query: 1069 PDMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
            P   P ELK E Y E+R KNNE+A+RSRE RRQKEE     C+ L  EN  +R E+  ++ QI+ +K  LS
Sbjct:   47 PTPVPDELKDEAYRERRLKNNESARRSREMRRQKEESTQRRCDQLLHENSILRTELSLLRNQIEQMKHALS 117

[Close]

BLAST of SMED30019431 vs. TrEMBL
Match: A0A3S5AZC2 (BZIP domain-containing protein OS=Protopolystoma xenopodis OX=117903 GN=PXEA_LOCUS2301 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.886e-9
Identity = 40/74 (54.05%), Postives = 55/74 (74.32%), Query Frame = 1

Query: 1036 TTISNPRMVRHPDMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQI 1257
             T SNPRM RHP+MTP+ELK  EYWEKR +NNEAA+RSR+ARR KE  L  + + L+ EN+ +R ++  +K ++
Sbjct:  589 ATYSNPRMKRHPNMTPQELKNAEYWEKRLRNNEAARRSRQARRSKESQLAKYADQLECENEALRDQVAALKAEV 662

[Close]

BLAST of SMED30019431 vs. TrEMBL
Match: A0A074ZHV3 (BZIP domain-containing protein OS=Opisthorchis viverrini OX=6198 GN=T265_05999 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.110e-9
Identity = 46/101 (45.54%), Postives = 66/101 (65.35%), Query Frame = 1

Query:  967 DDLSDEMLEKIKLKFGHIFENCNTTISNPRMVRHPDMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIK 1269
            D L D++  K+   F  + E  ++++ NPRM R P+MTP+E+K E YWEKR KNNEAA+RSR AR+ KE  L  + E L+  N K+  EIE +K ++  +K
Sbjct:  294 DSLKDDV--KLVKTFKVVHEKADSSVCNPRMRRFPEMTPREVKDETYWEKRVKNNEAARRSRRARKTKETKLREYAEKLEKTNAKLLGEIEILKSEVCRLK 392

[Close]

BLAST of SMED30019431 vs. Ensembl Cavefish
Match: dbpb (hepatic leukemia factor [Source:NCBI gene;Acc:103029963])

HSP 1 Score: 60.8474 bits (146), Expect = 1.826e-9
Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 1

Query: 1075 MTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
            + P  +K ++YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  ++ ++   + ILS
Sbjct:  283 LVPDNMKDDKYWSRRSKNNEAAKRSRDARRLKENQISVRAAFLERENASLRQEVADIRKELGRCRNILS 351

[Close]

BLAST of SMED30019431 vs. Ensembl Cavefish
Match: nfil3-4 (nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214])

HSP 1 Score: 58.9214 bits (141), Expect = 3.163e-9
Identity = 31/61 (50.82%), Postives = 38/61 (62.30%), Query Frame = 1

Query: 1072 DMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQ 1254
            + TP+E K   YWEKRRKNNEAAKRSRE RR  +  L      L  EN  +R E+  +KL+
Sbjct:   31 EFTPEEKKDTSYWEKRRKNNEAAKRSREKRRANDYMLETRLVALSEENAALRSELLALKLR 91

[Close]

BLAST of SMED30019431 vs. Ensembl Cavefish
Match: hlfa (hepatic leukemia factor-like [Source:NCBI gene;Acc:103025365])

HSP 1 Score: 58.151 bits (139), Expect = 9.043e-9
Identity = 28/67 (41.79%), Postives = 44/67 (65.67%), Query Frame = 1

Query: 1081 PKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
            P+++K ++YW +RRKNN AAKRSR+ARR KE  +      L+ EN  +R+E+  ++ ++   K IL 
Sbjct:  218 PEDMKDDKYWARRRKNNVAAKRSRDARRLKENQIAIRAAFLEKENAALRQEVADLRKELGRCKNILG 284

[Close]

BLAST of SMED30019431 vs. Ensembl Cavefish
Match: dbpa (thyrotroph embryonic factor-like [Source:NCBI gene;Acc:103025119])

HSP 1 Score: 57.3806 bits (137), Expect = 1.990e-8
Identity = 28/68 (41.18%), Postives = 44/68 (64.71%), Query Frame = 1

Query: 1075 MTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKIL 1278
            + P E K E+YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  ++ ++   + I+
Sbjct:  287 LVPDEQKDEKYWSRRVKNNEAAKRSRDARRLKENQISVRASFLERENAALRQEVADMRKELGRCRNII 354

[Close]

BLAST of SMED30019431 vs. Ensembl Cavefish
Match: tefa (thyrotroph embryonic factor [Source:NCBI gene;Acc:103028774])

HSP 1 Score: 56.6102 bits (135), Expect = 2.394e-8
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 1

Query: 1075 MTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
              P+E K E+YW++R+KNN AAKRSR+ARR KE  +T     L+ EN  +R+E+  ++      K  LS
Sbjct:  213 FVPEEQKDEKYWQRRKKNNIAAKRSRDARRLKENQITVRAAFLERENTALRQEVSELRKDFGRCKTTLS 281

[Close]

BLAST of SMED30019431 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004452.1 (pep scaffold:Pmarinus_7.0:GL482388:4981:7461:-1 gene:ENSPMAG00000004057.1 transcript:ENSPMAT00000004452.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 52.7582 bits (125), Expect = 4.651e-9
Identity = 29/64 (45.31%), Postives = 40/64 (62.50%), Query Frame = 1

Query: 1063 RHPDMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQ 1254
            R  + TP E K   YW+KRRKNNEAAKRSRE RR  +  L      L  EN +++ E+ +++L+
Sbjct:   27 RKREFTPSEKKDASYWDKRRKNNEAAKRSREKRRLNDLVLETRVLGLLDENARLKTELISLRLR 90

[Close]

BLAST of SMED30019431 vs. Ensembl Nematostella
Match: EDO49642 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RFQ5])

HSP 1 Score: 56.6102 bits (135), Expect = 1.291e-10
Identity = 27/58 (46.55%), Postives = 41/58 (70.69%), Query Frame = 1

Query: 1063 RHPDMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEI 1236
            R     P E+K ++YWE+R KNN AAKRSR+ +RQKE  +    ++L++EN+K+R E+
Sbjct:    2 RQRTSVPGEMKDQKYWERRLKNNVAAKRSRDLKRQKEMTVAKRAQNLEIENEKLRNEV 59

[Close]

BLAST of SMED30019431 vs. Ensembl Nematostella
Match: EDO47009 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RN55])

HSP 1 Score: 49.2914 bits (116), Expect = 1.282e-7
Identity = 27/69 (39.13%), Postives = 46/69 (66.67%), Query Frame = 1

Query: 1075 MTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
              P + K + YW +R KNN AA+RSR+ RRQKE  ++   + L+ EN ++R+E++ +K +  +++K LS
Sbjct:   17 FVPDQEKDDRYWARRVKNNVAARRSRDMRRQKEIEISMKWKQLEKENARLREELQQLKDRASELEKKLS 85

[Close]

BLAST of SMED30019431 vs. Ensembl Nematostella
Match: EDO27663 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T8M2])

HSP 1 Score: 48.9062 bits (115), Expect = 1.898e-7
Identity = 27/69 (39.13%), Postives = 46/69 (66.67%), Query Frame = 1

Query: 1075 MTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
              P + K + YW +R KNN AA+RSR+ RRQKE  ++   + L+ EN ++R+E++ +K +  +++K LS
Sbjct:   23 FVPDQEKDDRYWARRVKNNVAARRSRDMRRQKEIEISMKWKQLEKENARLREELQQLKDRASELEKKLS 91

[Close]

BLAST of SMED30019431 vs. Ensembl Nematostella
Match: EDO48945 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RHZ9])

HSP 1 Score: 50.0618 bits (118), Expect = 1.963e-6
Identity = 28/64 (43.75%), Postives = 42/64 (65.62%), Query Frame = 1

Query: 1087 ELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKIL 1278
            ++KTE+Y EKRRKNN +AKRSREAR+ +E         LQ EN K+R  +  +K +   +++I+
Sbjct:  285 DVKTEQYREKRRKNNASAKRSREARKMREIHAQTAAAYLQDENAKLRALVNVLKEENVYLREIM 348

[Close]

BLAST of SMED30019431 vs. Ensembl Medaka
Match: dbpb (hepatic leukemia factor [Source:NCBI gene;Acc:101163688])

HSP 1 Score: 60.8474 bits (146), Expect = 1.963e-9
Identity = 29/69 (42.03%), Postives = 45/69 (65.22%), Query Frame = 1

Query: 1075 MTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
            + P  +K E+YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  ++ ++   + ILS
Sbjct:  298 LVPDNMKDEKYWSRRHKNNEAAKRSRDARRLKENQISVRAAYLERENAALRQEVAEMRKELGRCRNILS 366

[Close]

BLAST of SMED30019431 vs. Ensembl Medaka
Match: dbpa (thyrotroph embryonic factor [Source:NCBI gene;Acc:101159928])

HSP 1 Score: 57.7658 bits (138), Expect = 2.097e-8
Identity = 28/68 (41.18%), Postives = 44/68 (64.71%), Query Frame = 1

Query: 1075 MTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKIL 1278
            + P E K E+YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  ++ ++   + I+
Sbjct:  307 LVPDEQKDEKYWSRRVKNNEAAKRSRDARRLKENQISVRAAFLERENAALRQEVADMRKELGRCRNII 374

[Close]

BLAST of SMED30019431 vs. Ensembl Medaka
Match: dbpa (thyrotroph embryonic factor [Source:NCBI gene;Acc:101159928])

HSP 1 Score: 57.3806 bits (137), Expect = 2.104e-8
Identity = 28/68 (41.18%), Postives = 44/68 (64.71%), Query Frame = 1

Query: 1075 MTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKIL 1278
            + P E K E+YW +R KNNEAAKRSR+ARR KE  ++     L+ EN  +R+E+  ++ ++   + I+
Sbjct:  307 LVPDEQKDEKYWSRRVKNNEAAKRSRDARRLKENQISVRAAFLERENAALRQEVADMRKELGRCRNII 374

[Close]

BLAST of SMED30019431 vs. Ensembl Medaka
Match: hlfa (HLF transcription factor, PAR bZIP family member [Source:NCBI gene;Acc:101160073])

HSP 1 Score: 56.9954 bits (136), Expect = 2.147e-8
Identity = 37/100 (37.00%), Postives = 53/100 (53.00%), Query Frame = 1

Query:  982 EMLEKIKLKFGHIFENCNTTISNPRMVRHPDMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
            EM +  K KF          I   R V  PD    ++K ++YW +RRKNN AAKRSR+ARR KE  +      L+ EN  +R E+  ++ ++   K IL+
Sbjct:  213 EMFDPRKRKFSAEELKPQPMIKKARKVFIPD----DMKDDKYWARRRKNNVAAKRSRDARRLKENQIAIRAGFLEKENAALRMEVADLRKELGRCKNILA 308

[Close]

BLAST of SMED30019431 vs. Ensembl Medaka
Match: hlfa (HLF transcription factor, PAR bZIP family member [Source:NCBI gene;Acc:101160073])

HSP 1 Score: 56.6102 bits (135), Expect = 2.426e-8
Identity = 37/100 (37.00%), Postives = 53/100 (53.00%), Query Frame = 1

Query:  982 EMLEKIKLKFGHIFENCNTTISNPRMVRHPDMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
            EM +  K KF          I   R V  PD    ++K ++YW +RRKNN AAKRSR+ARR KE  +      L+ EN  +R E+  ++ ++   K IL+
Sbjct:  177 EMFDPRKRKFSAEELKPQPMIKKARKVFIPD----DMKDDKYWARRRKNNVAAKRSRDARRLKENQIAIRAGFLEKENAALRMEVADLRKELGRCKNILA 272

[Close]

BLAST of SMED30019431 vs. Planmine SMEST
Match: SMESG000026144.1 (SMESG000026144.1)

HSP 1 Score: 683.715 bits (1763), Expect = 0.000e+0
Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 1

Query:  118 MAPPKCFFKRPGQFYGSGNTIVQSFKYESYSMPTSPNNEVIPNLCVDNINHCSVSPLKSEPLVHDLYKNILSTQINTETINEPTDFPLDLSCNNNLFKKLSRFFQQKIDXXXXXXXXXXXXXIFYXXXXXXXXXXXXXXXXXXXXXXXIFISPPLISDINWKPPLQQFIDRSLLNTERIHDDYRLQHSPDNSLSVIDXXXXXXXXXXXXXCATNQRRKRSNKRSQDGKIIRPFKLYKGTDSKSLLEAIGITEQDEEWLKNLIEKQNADVFQILSNVMNGSHKEDDLSDEMLEKIKLKFGHIFENCNTTISNPRMVRHPDMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 1281
            MAPPKCFFKRPGQFYGSGNTIVQSFKYESYSMPTSPNNEVIPNLCVDNINHCSVSPLKSEPLVHDLYKNILSTQINTETINEPTDFPLDLSCNNNLFKKLSRFFQQKIDSNVLSSLNLNLENIFYQLPPQLSPSLNLSLSPNQKPNPNIFISPPLISDINWKPPLQQFIDRSLLNTERIHDDYRLQHSPDNSLSVIDSGQENSSSETSSQCATNQRRKRSNKRSQDGKIIRPFKLYKGTDSKSLLEAIGITEQDEEWLKNLIEKQNADVFQILSNVMNGSHKEDDLSDEMLEKIKLKFGHIFENCNTTISNPRMVRHPDMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS
Sbjct:    1 MAPPKCFFKRPGQFYGSGNTIVQSFKYESYSMPTSPNNEVIPNLCVDNINHCSVSPLKSEPLVHDLYKNILSTQINTETINEPTDFPLDLSCNNNLFKKLSRFFQQKIDSNVLSSLNLNLENIFYQLPPQLSPSLNLSLSPNQKPNPNIFISPPLISDINWKPPLQQFIDRSLLNTERIHDDYRLQHSPDNSLSVIDSGQENSSSETSSQCATNQRRKRSNKRSQDGKIIRPFKLYKGTDSKSLLEAIGITEQDEEWLKNLIEKQNADVFQILSNVMNGSHKEDDLSDEMLEKIKLKFGHIFENCNTTISNPRMVRHPDMTPKELKTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS 388

[Close]

BLAST of SMED30019431 vs. Planmine SMEST
Match: SMESG000012495.1 (SMESG000012495.1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.068e-7
Identity = 27/63 (42.86%), Postives = 42/63 (66.67%), Query Frame = 1

Query: 1066 HPDMTPKEL--KTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVK 1248
            +P++   ++  K E YWE+RRKNN AAKRSRE RRQ +  +    ++L++ N  +RKE+  +K
Sbjct:   51 YPNLNVSDVSEKDERYWERRRKNNAAAKRSRERRRQHDIAMEQQIQNLKLSNAILRKELFVLK 113

[Close]

BLAST of SMED30019431 vs. Planmine SMEST
Match: SMESG000012495.1 (SMESG000012495.1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.184e-7
Identity = 27/63 (42.86%), Postives = 42/63 (66.67%), Query Frame = 1

Query: 1066 HPDMTPKEL--KTEEYWEKRRKNNEAAKRSREARRQKEEGLTNHCEDLQMENDKIRKEIETVK 1248
            +P++   ++  K E YWE+RRKNN AAKRSRE RRQ +  +    ++L++ N  +RKE+  +K
Sbjct:   45 YPNLNVSDVSEKDERYWERRRKNNAAAKRSRERRRQHDIAMEQQIQNLKLSNAILRKELFVLK 107

The following BLAST results are available for this feature:

BLAST of SMED30019431 vs. Ensembl Human
BLAST of SMED30019431 vs. Ensembl Celegans
BLAST of SMED30019431 vs. Ensembl Fly
BLAST of SMED30019431 vs. Ensembl Zebrafish
BLAST of SMED30019431 vs. Ensembl Xenopus
BLAST of SMED30019431 vs. Ensembl Mouse
BLAST of SMED30019431 vs. UniProt/SwissProt
BLAST of SMED30019431 vs. TrEMBL
BLAST of SMED30019431 vs. Ensembl Cavefish
BLAST of SMED30019431 vs. Ensembl Sea Lamprey
BLAST of SMED30019431 vs. Ensembl Yeast
BLAST of SMED30019431 vs. Ensembl Nematostella
BLAST of SMED30019431 vs. Ensembl Medaka
BLAST of SMED30019431 vs. Planmine SMEST

BLAST of SMED30019431 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
DBP	4.340e-10	44.12	D-box binding PAR bZIP transcription factor [Sourc...	[more]
DBP	4.340e-10	44.12	D-box binding PAR bZIP transcription factor [Sourc...	[more]
DBP	2.464e-9	44.12	D-box binding PAR bZIP transcription factor [Sourc...	[more]
HLF	2.664e-9	38.00	HLF transcription factor, PAR bZIP family member [...	[more]
HLF	2.664e-9	38.00	HLF transcription factor, PAR bZIP family member [...	[more]

BLAST of SMED30019431 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 3


Match Name	E-value	Identity	Description
ces-2	5.807e-10	42.42	Cell death specification protein 2 [Source:UniPro...	[more]
atf-8	6.090e-8	34.67	ATF (cAMP-dependent transcription factor) family ...	[more]
atf-2	1.136e-6	41.27	ATF (cAMP-dependent transcription factor) family ...	[more]

BLAST of SMED30019431 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Pdp1	1.350e-10	46.38	gene:FBgn0016694 transcript:FBtr0332081	[more]
Pdp1	1.353e-10	46.38	gene:FBgn0016694 transcript:FBtr0076775	[more]
Pdp1	1.363e-10	46.38	gene:FBgn0016694 transcript:FBtr0076776	[more]
Pdp1	1.363e-10	46.38	gene:FBgn0016694 transcript:FBtr0346536	[more]
Pdp1	1.363e-10	46.38	gene:FBgn0016694 transcript:FBtr0306535	[more]

BLAST of SMED30019431 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
dbpb	2.447e-9	42.65	D site albumin promoter binding protein b [Source:...	[more]
dbpb	2.502e-9	42.65	D site albumin promoter binding protein b [Source:...	[more]
dbpb	2.592e-9	42.65	D site albumin promoter binding protein b [Source:...	[more]
hlfb	8.750e-9	44.78	HLF transcription factor, PAR bZIP family member b...	[more]
si:dkey-60d5.3	1.689e-8	42.86	si:dkey-60d5.3 [Source:ZFIN;Acc:ZDB-GENE-131127-46...	[more]

BLAST of SMED30019431 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
mbd2	2.517e-10	45.59	methyl-CpG binding domain protein 2 [Source:Xenbas...	[more]
mbd2	1.570e-9	45.59	methyl-CpG binding domain protein 2 [Source:Xenbas...	[more]
mga	5.535e-9	42.65	MGA, MAX dimerization protein [Source:Xenbase;Acc:...	[more]
mga	6.753e-9	42.65	MGA, MAX dimerization protein [Source:Xenbase;Acc:...	[more]
chm	2.001e-7	42.42	choroideremia (Rab escort protein 1) [Source:Xenba...	[more]

BLAST of SMED30019431 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Dbp	9.126e-10	44.12	D site albumin promoter binding protein [Source:MG...	[more]
Dbp	1.374e-9	44.12	D site albumin promoter binding protein [Source:MG...	[more]
Dbp	2.007e-9	44.12	D site albumin promoter binding protein [Source:MG...	[more]
Hlf	3.729e-9	38.00	hepatic leukemia factor [Source:MGI Symbol;Acc:MGI...	[more]
Tef	8.072e-9	43.48	thyrotroph embryonic factor [Source:MGI Symbol;Acc...	[more]

BLAST of SMED30019431 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q94126\|CES2_CAEEL	7.386e-9	42.42	Cell death specification protein 2 OS=Caenorhabdit...	[more]
sp\|Q10586\|DBP_HUMAN	1.183e-8	44.12	D site-binding protein OS=Homo sapiens OX=9606 GN=...	[more]
sp\|Q32PF6\|DBP_BOVIN	1.283e-8	44.12	D site-binding protein OS=Bos taurus OX=9913 GN=DB...	[more]
sp\|P16443\|DBP_RAT	1.391e-8	44.12	D site-binding protein OS=Rattus norvegicus OX=101...	[more]
sp\|Q60925\|DBP_MOUSE	1.404e-8	44.12	D site-binding protein OS=Mus musculus OX=10090 GN...	[more]

BLAST of SMED30019431 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0N4V3E6	1.713e-10	46.67	BZIP domain-containing protein OS=Enterobius vermi...	[more]
A0A0N4V5J4	4.738e-10	48.61	BZIP domain-containing protein OS=Enterobius vermi...	[more]
A0A0N5A9E1	1.629e-9	49.30	BZIP domain-containing protein OS=Syphacia muris O...	[more]
A0A3S5AZC2	1.886e-9	54.05	BZIP domain-containing protein OS=Protopolystoma x...	[more]
A0A074ZHV3	2.110e-9	45.54	BZIP domain-containing protein OS=Opisthorchis viv...	[more]

BLAST of SMED30019431 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
dbpb	1.826e-9	40.58	hepatic leukemia factor [Source:NCBI gene;Acc:1030...	[more]
nfil3-4	3.163e-9	50.82	nuclear factor, interleukin 3 regulated, member 4 ...	[more]
hlfa	9.043e-9	41.79	hepatic leukemia factor-like [Source:NCBI gene;Acc...	[more]
dbpa	1.990e-8	41.18	thyrotroph embryonic factor-like [Source:NCBI gene...	[more]
tefa	2.394e-8	43.48	thyrotroph embryonic factor [Source:NCBI gene;Acc:...	[more]

BLAST of SMED30019431 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1


Match Name	E-value	Identity	Description
ENSPMAT00000004452.1	4.651e-9	45.31	pep scaffold:Pmarinus_7.0:GL482388:4981:7461:-1 ge...	[more]

BLAST of SMED30019431 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of SMED30019431 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 4


Match Name	E-value	Identity	Description
EDO49642	1.291e-10	46.55	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO47009	1.282e-7	39.13	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO27663	1.898e-7	39.13	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO48945	1.963e-6	43.75	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of SMED30019431 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
dbpb	1.963e-9	42.03	hepatic leukemia factor [Source:NCBI gene;Acc:1011...	[more]
dbpa	2.097e-8	41.18	thyrotroph embryonic factor [Source:NCBI gene;Acc:...	[more]
dbpa	2.104e-8	41.18	thyrotroph embryonic factor [Source:NCBI gene;Acc:...	[more]
hlfa	2.147e-8	37.00	HLF transcription factor, PAR bZIP family member [...	[more]
hlfa	2.426e-8	37.00	HLF transcription factor, PAR bZIP family member [...	[more]

BLAST of SMED30019431 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3


Match Name	E-value	Identity	Description
SMESG000026144.1	0.000e+0	100.00	SMESG000026144.1	[more]
SMESG000012495.1	1.068e-7	42.86	SMESG000012495.1	[more]
SMESG000012495.1	1.184e-7	42.86	SMESG000012495.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30019431 ID=SMED30019431|Name=SMED30019431|organism=Schmidtea mediterranea sexual|type=transcript|length=1983bp
GAAAACCTGGTATTCTGTGAATATCAATTAATACTGCAGCGTGATCAATT
GAAAGAAAAAAATTCTGATTTTTTAAAGAAATAGATTTATATCGTTTGGA
TTTACCATATAAAGCAAATGGCTCCGCCGAAGTGTTTTTTTAAGCGGCCA
GGACAATTCTACGGGTCTGGTAACACAATTGTTCAATCATTCAAATACGA
ATCATATTCCATGCCTACCTCTCCGAATAATGAAGTCATTCCTAATTTAT
GCGTCGACAATATTAACCACTGCTCGGTTTCTCCACTAAAATCAGAACCA
TTAGTGCATGATCTCTATAAAAATATTCTATCCACCCAAATCAATACCGA
AACAATAAACGAGCCGACTGATTTCCCATTGGATCTCAGCTGTAATAATA
ATCTATTCAAAAAGCTCAGTCGATTTTTTCAACAGAAAATCGATTCCAAT
GTGCTATCAAGTCTAAATTTAAATCTAGAAAATATATTTTATCAATTGCC
ACCTCAATTAAGTCCGTCATTAAATTTATCGCTCTCCCCCAATCAAAAAC
CCAATCCAAATATTTTCATTTCTCCTCCCTTAATATCAGACATCAATTGG
AAACCCCCCCTCCAACAATTTATAGATAGATCGTTATTAAATACCGAACG
AATTCACGATGATTATCGACTCCAACATTCCCCGGACAATTCTTTATCAG
TAATCGATTCCGGTCAAGAAAACAGTTCTTCGGAAACTTCGAGTCAATGT
GCAACAAATCAGCGTCGAAAACGGTCGAATAAACGCAGCCAAGACGGCAA
AATCATCCGTCCATTTAAACTTTACAAAGGAACCGATTCGAAAAGTTTAT
TGGAAGCAATAGGAATCACTGAGCAAGACGAAGAGTGGTTGAAAAATCTT
ATCGAAAAACAAAATGCCGACGTGTTTCAAATCCTGTCTAACGTAATGAA
CGGTTCTCATAAAGAAGACGATTTATCGGACGAGATGTTGGAGAAAATCA
AACTGAAATTCGGGCATATTTTTGAAAACTGCAACACAACGATTTCCAAT
CCGAGAATGGTTCGACATCCTGACATGACACCGAAAGAATTGAAAACCGA
AGAGTATTGGGAGAAACGTCGTAAGAATAATGAAGCGGCAAAACGATCGA
GAGAAGCCAGGCGGCAAAAAGAAGAGGGCTTAACGAATCATTGCGAAGAT
TTACAAATGGAAAATGACAAAATTCGTAAGGAAATCGAAACTGTAAAATT
GCAAATTCAAGATATTAAAAAGATTTTAAGCTGATCATGAATAACTGCAC
CAAGCGACACAAAATTTATTTATTTAATTATTATTATTAATATTATTATT
TTAGTGAATAAATTTTTGTTCTATGTTTCATTGTGAGTTGAATAACAAAT
ATAATAGTTTTTTTAGCAAAAGTAAATTGGTCAAAATGTCATGATTGTTC
ATCATAAATTGTGTGCAAATTCACTTTCAAAAAGCAGCAAATAAAAACTT
TTGGCCTACACCATTTAGTGATTTGTTTTAATTGTTAGATTTATTATTTG
TGTTTATAATTGAGAAAAATGATTTTGTTTGTTATAATCTTTGGTTTTTT
CATTTCTATTATCAATGCAATAACGTATGATGAAGCAATGAAAGAAAAGG
ATAGATACGTCGTTTTTGACGTAGAACCATTCAAGATGTGGCAGCACATT
GTTCTGTCTTTGGTGTTGTCTTATATACTTCTGGTGATCATGTGGATTAG
TATTAATGTTGTTTTTAAAATTCGTGGACCAAAGAGAAAACGCCGTTTAA
ATTGAGGTTGAAATTTACTTTTTCCTCATATGAATTATATAAATTTTTAT
ATTTTAATATATTTATATTTGTGTATATTTTTGTTAGAATTTTAGATTTT
ATTACAGTAGAAATTATTAAATAATTGACATTTATTTATCAAATTTATTG
TCAAGTAACTGCCAGTTGTTATCTTCATTGGTC

protein sequence of SMED30019431-orf-1

>SMED30019431-orf-1 ID=SMED30019431-orf-1|Name=SMED30019431-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=389bp
MAPPKCFFKRPGQFYGSGNTIVQSFKYESYSMPTSPNNEVIPNLCVDNIN
HCSVSPLKSEPLVHDLYKNILSTQINTETINEPTDFPLDLSCNNNLFKKL
SRFFQQKIDSNVLSSLNLNLENIFYQLPPQLSPSLNLSLSPNQKPNPNIF
ISPPLISDINWKPPLQQFIDRSLLNTERIHDDYRLQHSPDNSLSVIDSGQ
ENSSSETSSQCATNQRRKRSNKRSQDGKIIRPFKLYKGTDSKSLLEAIGI
TEQDEEWLKNLIEKQNADVFQILSNVMNGSHKEDDLSDEMLEKIKLKFGH
IFENCNTTISNPRMVRHPDMTPKELKTEEYWEKRRKNNEAAKRSREARRQ
KEEGLTNHCEDLQMENDKIRKEIETVKLQIQDIKKILS*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000016	pharynx
PLANA:0000026	gut
PLANA:0000034	epidermis
PLANA:0000035	Category 3 cell
PLANA:0002032	epidermal cell
PLANA:0003116	parenchymal cell
PLANA:0007528	glial cell

Vocabulary: **INTERPRO**
Term	Definition
IPR040223	PAR_bZIP
IPR004827	bZIP

Vocabulary: **biological process**
Term	Definition
GO:0006357	regulation of transcription from RNA polymerase II promoter
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **molecular function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 333..386
None	No IPR available	GENE3D	G3DSA:1.20.5.170		coord: 318..388 e-value: 8.7E-19 score: 69.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..359
None	No IPR available	CDD	cd14695	bZIP_HLF	coord: 326..385 e-value: 7.99221E-20 score: 80.2889
None	No IPR available	SUPERFAMILY	SSF57959	Leucine zipper domain	coord: 326..386
IPR004827	Basic-leucine zipper domain	SMART	SM00338	brlzneu	coord: 325..388 e-value: 1.3E-4 score: 31.4
IPR004827	Basic-leucine zipper domain	PFAM	PF07716	bZIP_2	coord: 326..377 e-value: 4.1E-14 score: 52.4
IPR004827	Basic-leucine zipper domain	PROSITE	PS50217	BZIP	coord: 327..388 score: 10.749
IPR040223	PAR basic leucine zipper protein	PANTHER	PTHR11988	THYROTROPH EMBRYONIC FACTOR RELATED	coord: 144..388

Main menu

SMED30019431

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Owlery

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