40S ribosomal protein S3a

Overview
Name40S ribosomal protein S3a
Smed IDSMED30019273
Length (bp)882
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of 40S ribosomal protein S3a (SMED30019273) t-SNE clustered cells

Violin plots show distribution of expression levels for 40S ribosomal protein S3a (SMED30019273) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 40S ribosomal protein S3a (SMED30019273) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 40S ribosomal protein S3a (SMED30019273) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30019273

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 13

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30019273SMESG000066540.1 SMESG000066537.1 SmedASXL_003914SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015
FACS sorted cell population asexual adult RNA-sequencing evidence
pharynxSMED30019273SMESG000066540.1 SMESG000066537.1 dd_Smed_v4_163_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
protonephridiaSMED30019273SMESG000066540.1 SMESG000066537.1 dd_Smed_v4_163_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30019273SMESG000066540.1 SMESG000066537.1 dd_Smed_v4_163_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30019273SMESG000066540.1 SMESG000066537.1 dd_Smed_v4_163_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30019273SMESG000066540.1 SMESG000066537.1 dd_Smed_v4_163_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30019273SMESG000066540.1 SMESG000066537.1 dd_Smed_v4_163_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30019273SMESG000066540.1 SMESG000066537.1 dd_Smed_v4_163_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30019273SMESG000066540.1 SMESG000066537.1 dd_Smed_v4_163_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30019273SMESG000066540.1 SMESG000066537.1 dd_Smed_v4_163_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30019273SMESG000066540.1 SMESG000066537.1 dd_Smed_v4_163_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30019273SMESG000066540.1 SMESG000066537.1 dd_Smed_v4_163_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30019273SMESG000066540.1 SMESG000066537.1 dd_Smed_v6_163_0dd_Smed_v6PMID:29674432
Plass et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of 40S ribosomal protein S3a vs. Ensembl Human
Match: RPS3A (ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421])

HSP 1 Score: 283.108 bits (723), Expect = 3.943e-95
Identity = 138/243 (56.79%), Postives = 178/243 (73.25%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGE----IIERPDGHEPPVQTSV 850
            DPF KK+W+ ++AP+MF  R+  +T+VT+TQGTKIAS+GLK RV  +SL +L +  E  FRKF L  EDVQG  CLT+F GM LT DKMCSMVKKWQT IE   DVKTTD + LR+F + FTKK  NQ++K +YAQ QQ++ IR  M E++  EV + D+KEVV KL  DSIGKDI + C  I+PL D  VRKVK+++KPK +L KLM+LHG+ +++  ATG+     +ER DG+EPPVQ SV
Sbjct:   23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADL-QNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264          
BLAST of 40S ribosomal protein S3a vs. Ensembl Human
Match: RPS3A (ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421])

HSP 1 Score: 263.077 bits (671), Expect = 6.778e-88
Identity = 127/222 (57.21%), Postives = 164/222 (73.87%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATG 799
            DPF KK+W+ ++AP+MF  R+  +T+VT+TQGTKIAS+GLK RV  +SL +L +  E  FRKF L  EDVQG  CLT+F GM LT DKMCSMVKKWQT IE   DVKTTD + LR+F + FTKK  NQ++K +YAQ QQ++ IR  M E++  EV + D+KEVV KL  DSIGKDI + C  I+PL D  VRKVK+++KPK +L KLM+LHG+ +++  ATG
Sbjct:    3 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADL-QNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATG 223          
BLAST of 40S ribosomal protein S3a vs. Ensembl Human
Match: RPS3A (ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421])

HSP 1 Score: 259.61 bits (662), Expect = 1.505e-86
Identity = 130/228 (57.02%), Postives = 165/228 (72.37%), Query Frame = 2
Query:  179 MFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGE----IIERPDGHEPPVQTSV 850
            MF  R+  +T+VT+TQGTKIAS+GLK RV  +SL +L +  E  FRKF L  EDVQG  CLT+F GM LT DKMCSMVKKWQT IE   DVKTTD + LR+F + FTKK  NQ++K +YAQ QQ++ IR  M E++  EV + D+KEVV KL  DSIGKDI + C  I+PL D  VRKVK+++KPK +L KLM+LHG+ +++  ATG+     +ER DG+EPPVQ SV
Sbjct:    1 MFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADL-QNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 227          
BLAST of 40S ribosomal protein S3a vs. Ensembl Human
Match: RPS3A (ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421])

HSP 1 Score: 259.61 bits (662), Expect = 1.505e-86
Identity = 130/228 (57.02%), Postives = 165/228 (72.37%), Query Frame = 2
Query:  179 MFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGE----IIERPDGHEPPVQTSV 850
            MF  R+  +T+VT+TQGTKIAS+GLK RV  +SL +L +  E  FRKF L  EDVQG  CLT+F GM LT DKMCSMVKKWQT IE   DVKTTD + LR+F + FTKK  NQ++K +YAQ QQ++ IR  M E++  EV + D+KEVV KL  DSIGKDI + C  I+PL D  VRKVK+++KPK +L KLM+LHG+ +++  ATG+     +ER DG+EPPVQ SV
Sbjct:    1 MFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADL-QNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 227          
BLAST of 40S ribosomal protein S3a vs. Ensembl Human
Match: RPS3A (ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421])

HSP 1 Score: 224.557 bits (571), Expect = 2.911e-73
Identity = 113/194 (58.25%), Postives = 141/194 (72.68%), Query Frame = 2
Query:  179 MFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMD 760
            MF  R+  +T+VT+TQGTKIAS+GLK RV  +SL +L +  E  FRKF L  EDVQG  CLT+F GM LT DKMCSMVKKWQT IE   DVKTTD + LR+F + FTKK  NQ++K +YAQ QQ++ IR  M E++  EV + D+KEVV KL  DSIGKDI + C  I+PL D  VRKVK+++KPK +L KLM+
Sbjct:    1 MFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADL-QNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLME 193          
BLAST of 40S ribosomal protein S3a vs. Ensembl Celegans
Match: rps-1 (40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154])

HSP 1 Score: 276.559 bits (706), Expect = 4.077e-93
Identity = 135/239 (56.49%), Postives = 172/239 (71.97%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGEIIERPDGHEPPVQTSV 850
            DPF +KEW+ I+AP+MF  R   +T++ +TQGTKIASEGLK RV  +SLG+LN    D FRKF L  EDVQG   LT+F  M +T DK+CS+VKKW T IE    VKTTD + LRVFVIAFTKK+ NQ+KK +Y +  +I+ IR  M   I+ EV  CD+KEVV KL  DSIGKDI + CS ++PL +  +RKVK+I++PK+DL +L DLHGDS  T+ A GE ++RPD +EPPVQ  V
Sbjct:   21 DPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDLNNSEAD-FRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSVNQVKKTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPKVDLGRLHDLHGDS-ITVGADGEKVDRPDDYEPPVQQEV 257          
BLAST of 40S ribosomal protein S3a vs. Ensembl Celegans
Match: rps-1 (40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154])

HSP 1 Score: 276.559 bits (706), Expect = 4.077e-93
Identity = 135/239 (56.49%), Postives = 172/239 (71.97%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGEIIERPDGHEPPVQTSV 850
            DPF +KEW+ I+AP+MF  R   +T++ +TQGTKIASEGLK RV  +SLG+LN    D FRKF L  EDVQG   LT+F  M +T DK+CS+VKKW T IE    VKTTD + LRVFVIAFTKK+ NQ+KK +Y +  +I+ IR  M   I+ EV  CD+KEVV KL  DSIGKDI + CS ++PL +  +RKVK+I++PK+DL +L DLHGDS  T+ A GE ++RPD +EPPVQ  V
Sbjct:   21 DPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDLNNSEAD-FRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSVNQVKKTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPKVDLGRLHDLHGDS-ITVGADGEKVDRPDDYEPPVQQEV 257          
BLAST of 40S ribosomal protein S3a vs. Ensembl Fly
Match: RpS3A (gene:FBgn0017545 transcript:FBtr0308296)

HSP 1 Score: 245.743 bits (626), Expect = 9.447e-81
Identity = 118/246 (47.97%), Postives = 163/246 (66.26%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKT--EDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSA-----TTISATGEIIERPDGHEPPVQTSV 850
            DPF +K+W+ ++AP+MF  R   +T+V +TQG +IAS+ LK RV  +SL +L +    E +FRKF L  EDVQ    L +F GM LTTDK  SMVKKWQT IE   + KT D + LRVF I FT K     +K  YAQ  Q++ IR  M ++I  EV+  D+K++V KL +DSI KDI + C  I+PL D  +RKVKV++KP+ D++KL++LHGD         +S+ G +I+RP+G+EPPVQ +V
Sbjct:   23 DPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 268          
BLAST of 40S ribosomal protein S3a vs. Ensembl Fly
Match: RpS3A (gene:FBgn0017545 transcript:FBtr0089175)

HSP 1 Score: 245.743 bits (626), Expect = 9.447e-81
Identity = 118/246 (47.97%), Postives = 163/246 (66.26%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKT--EDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSA-----TTISATGEIIERPDGHEPPVQTSV 850
            DPF +K+W+ ++AP+MF  R   +T+V +TQG +IAS+ LK RV  +SL +L +    E +FRKF L  EDVQ    L +F GM LTTDK  SMVKKWQT IE   + KT D + LRVF I FT K     +K  YAQ  Q++ IR  M ++I  EV+  D+K++V KL +DSI KDI + C  I+PL D  +RKVKV++KP+ D++KL++LHGD         +S+ G +I+RP+G+EPPVQ +V
Sbjct:   23 DPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 268          
BLAST of 40S ribosomal protein S3a vs. Ensembl Fly
Match: RpS3A (gene:FBgn0017545 transcript:FBtr0089176)

HSP 1 Score: 196.823 bits (499), Expect = 2.569e-62
Identity = 98/205 (47.80%), Postives = 132/205 (64.39%), Query Frame = 2
Query:  257 NRVVTMSLGELNEKT--EDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSA-----TTISATGEIIERPDGHEPPVQTSV 850
             RV  +SL +L +    E +FRKF L  EDVQ    L +F GM LTTDK  SMVKKWQT IE   + KT D + LRVF I FT K     +K  YAQ  Q++ IR  M ++I  EV+  D+K++V KL +DSI KDI + C  I+PL D  +RKVKV++KP+ D++KL++LHGD         +S+ G +I+RP+G+EPPVQ +V
Sbjct:   14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 218          
BLAST of 40S ribosomal protein S3a vs. Ensembl Zebrafish
Match: rps3a (ribosomal protein S3A [Source:NCBI gene;Acc:337240])

HSP 1 Score: 281.952 bits (720), Expect = 6.633e-95
Identity = 136/246 (55.28%), Postives = 177/246 (71.95%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISA-------TGEIIERPDGHEPPVQTSV 850
            DPF KK+W+ ++AP+MF  R+  +T+VT+TQGT+IAS+GLK RV  +SL +L +  E  FRKF L  EDVQG  CLT+F GM LT DKMCSMVKKWQT IE   DVKTTD + LR+F + FTKK  NQ++K +YAQ QQ++ IR  M E++  EV + D+KEVV KL  DS+GKDI + C  I+PL D  VRKVK+++KPK +L KLM+LHG+  +T +A       TG  +ER DG+EPP+Q SV
Sbjct:   23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADL-QNDEVAFRKFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSTSAAAKPAEGDTGAKVERADGYEPPIQESV 267          
BLAST of 40S ribosomal protein S3a vs. Ensembl Zebrafish
Match: rps3a (ribosomal protein S3A [Source:NCBI gene;Acc:337240])

HSP 1 Score: 281.952 bits (720), Expect = 6.633e-95
Identity = 136/246 (55.28%), Postives = 177/246 (71.95%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISA-------TGEIIERPDGHEPPVQTSV 850
            DPF KK+W+ ++AP+MF  R+  +T+VT+TQGT+IAS+GLK RV  +SL +L +  E  FRKF L  EDVQG  CLT+F GM LT DKMCSMVKKWQT IE   DVKTTD + LR+F + FTKK  NQ++K +YAQ QQ++ IR  M E++  EV + D+KEVV KL  DS+GKDI + C  I+PL D  VRKVK+++KPK +L KLM+LHG+  +T +A       TG  +ER DG+EPP+Q SV
Sbjct:   23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADL-QNDEVAFRKFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSTSAAAKPAEGDTGAKVERADGYEPPIQESV 267          
BLAST of 40S ribosomal protein S3a vs. Ensembl Zebrafish
Match: rps3a (ribosomal protein S3A [Source:NCBI gene;Acc:337240])

HSP 1 Score: 281.952 bits (720), Expect = 6.633e-95
Identity = 136/246 (55.28%), Postives = 177/246 (71.95%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISA-------TGEIIERPDGHEPPVQTSV 850
            DPF KK+W+ ++AP+MF  R+  +T+VT+TQGT+IAS+GLK RV  +SL +L +  E  FRKF L  EDVQG  CLT+F GM LT DKMCSMVKKWQT IE   DVKTTD + LR+F + FTKK  NQ++K +YAQ QQ++ IR  M E++  EV + D+KEVV KL  DS+GKDI + C  I+PL D  VRKVK+++KPK +L KLM+LHG+  +T +A       TG  +ER DG+EPP+Q SV
Sbjct:   23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADL-QNDEVAFRKFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSTSAAAKPAEGDTGAKVERADGYEPPIQESV 267          
BLAST of 40S ribosomal protein S3a vs. Ensembl Xenopus
Match: ppp6r3 (protein phosphatase 6 regulatory subunit 3 [Source:Xenbase;Acc:XB-GENE-5822318])

HSP 1 Score: 279.256 bits (713), Expect = 9.219e-94
Identity = 137/243 (56.38%), Postives = 173/243 (71.19%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSAT----TISATGEIIERPDGHEPPVQTSV 850
            DPF KK+W+ ++AP+MF  R+  +T+VT+TQGTKIAS+GLK RV  +SL +L +  E  FRKF L  EDVQG  CLT+F GM LT DKMCSMVKKWQT IE   DVKTTD + LR+F + FTKK  NQ++K +YAQ QQ++ IR  M E++  EV + D+KEVV KL  DSIGKDI + C  I+PL D  VRKVK+++KPK +L KLM+LHG+           TG  +ER DG+EPPVQ SV
Sbjct:   23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADL-QNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPAGDETGAKVERADGYEPPVQESV 264          
BLAST of 40S ribosomal protein S3a vs. Ensembl Xenopus
Match: ppp6r3 (protein phosphatase 6 regulatory subunit 3 [Source:Xenbase;Acc:XB-GENE-5822318])

HSP 1 Score: 200.29 bits (508), Expect = 1.580e-63
Identity = 97/167 (58.08%), Postives = 123/167 (73.65%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKL 634
            DPF KK+W+ ++AP+MF  R+  +T+VT+TQGTKIAS+GLK RV  +SL +L +  E  FRKF L  EDVQG  CLT+F GM LT DKMCSMVKKWQT IE   DVKTTD + LR+F + FTKK  NQ++K +YAQ QQ++ IR  M E++  EV + D+KEVV KL
Sbjct:   23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADL-QNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKL 188          
BLAST of 40S ribosomal protein S3a vs. Ensembl Mouse
Match: Rps3a1 (ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063])

HSP 1 Score: 282.337 bits (721), Expect = 5.152e-95
Identity = 138/243 (56.79%), Postives = 176/243 (72.43%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISA----TGEIIERPDGHEPPVQTSV 850
            DPF KK+W+ ++AP+MF  R+  +T+VT+TQGTKIAS+GLK RV  +SL +L +  E  FRKF L  EDVQG  CLT+F GM LT DKMCSMVKKWQT IE   DVKTTD + LR+F + FTKK  NQ++K +YAQ QQ++ IR  M E++  EV + D+KEVV KL  DSIGKDI + C  I+PL D  VRKVK+++KPK +L KLM+LHG+  ++  A    TG  +ER DG+EPPVQ SV
Sbjct:   23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADL-QNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVERADGYEPPVQESV 264          
BLAST of 40S ribosomal protein S3a vs. UniProt/SwissProt
Match: sp|Q5DAA3|RS3A_SCHJA (40S ribosomal protein S3a OS=Schistosoma japonicum OX=6182 GN=SJCHGC01275 PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 4.140e-100
Identity = 139/240 (57.92%), Postives = 183/240 (76.25%), Query Frame = 2
Query:  131 SDPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGEIIERPDGHEPPVQTSV 850
            +DPF KKEW+ I+AP+MFPKR+ ART+VT+TQGT+IASE LK RVVT+SLG+L+EK E+ FRKF LQIEDVQG  CLT+F G++LT DK+CS+V KW++TIE   DVKTTD + LR F+I FT   P   + H+YAQ  +IK IR  + E+IQ EV++CD+KEVV KL  DSI +D  +  S+I+PL +  +RKVKV+++PK DL +LM+LHG+S +T  A GE + RPD +EPP   SV
Sbjct:   22 ADPFSKKEWYDIKAPAMFPKRTCARTLVTRTQGTRIASEALKGRVVTLSLGDLSEKNEEVFRKFKLQIEDVQGRHCLTNFHGLELTRDKLCSVVVKWRSTIEAHVDVKTTDGYLLRFFIITFTPSVPRSERLHSYAQTTRIKRIRARLVEIIQQEVSTCDLKEVVNKLIPDSIAQDARKAASWIYPLGETFIRKVKVLKRPKADLARLMELHGESKST--APGETVSRPDHYEPPKVDSV 259          
BLAST of 40S ribosomal protein S3a vs. UniProt/SwissProt
Match: sp|P61246|RS3A_FELCA (40S ribosomal protein S3a (Fragment) OS=Felis catus OX=9685 GN=RPS3A PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.848e-94
Identity = 138/243 (56.79%), Postives = 178/243 (73.25%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGE----IIERPDGHEPPVQTSV 850
            DPF KK+W+ ++AP+MF  R+  +T+VT+TQGTKIAS+GLK RV  +SL +L +  E  FRKF L  EDVQG  CLT+F GM LT DKMCSMVKKWQT IE   DVKTTD + LR+F + FTKK  NQ++K +YAQ QQ++ IR  M E++  EV + D+KEVV KL  DSIGKDI + C  I+PL D  VRKVK+++KPK +L KLM+LHG+ +++  ATG+     +ER DG+EPPVQ SV
Sbjct:   19 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADL-QNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 260          
BLAST of 40S ribosomal protein S3a vs. UniProt/SwissProt
Match: sp|P61247|RS3A_HUMAN (40S ribosomal protein S3a OS=Homo sapiens OX=9606 GN=RPS3A PE=1 SV=2)

HSP 1 Score: 283.108 bits (723), Expect = 1.894e-94
Identity = 138/243 (56.79%), Postives = 178/243 (73.25%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGE----IIERPDGHEPPVQTSV 850
            DPF KK+W+ ++AP+MF  R+  +T+VT+TQGTKIAS+GLK RV  +SL +L +  E  FRKF L  EDVQG  CLT+F GM LT DKMCSMVKKWQT IE   DVKTTD + LR+F + FTKK  NQ++K +YAQ QQ++ IR  M E++  EV + D+KEVV KL  DSIGKDI + C  I+PL D  VRKVK+++KPK +L KLM+LHG+ +++  ATG+     +ER DG+EPPVQ SV
Sbjct:   23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADL-QNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264          
BLAST of 40S ribosomal protein S3a vs. UniProt/SwissProt
Match: sp|Q56JV9|RS3A_BOVIN (40S ribosomal protein S3a OS=Bos taurus OX=9913 GN=RPS3A PE=2 SV=3)

HSP 1 Score: 283.108 bits (723), Expect = 1.894e-94
Identity = 138/243 (56.79%), Postives = 178/243 (73.25%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGE----IIERPDGHEPPVQTSV 850
            DPF KK+W+ ++AP+MF  R+  +T+VT+TQGTKIAS+GLK RV  +SL +L +  E  FRKF L  EDVQG  CLT+F GM LT DKMCSMVKKWQT IE   DVKTTD + LR+F + FTKK  NQ++K +YAQ QQ++ IR  M E++  EV + D+KEVV KL  DSIGKDI + C  I+PL D  VRKVK+++KPK +L KLM+LHG+ +++  ATG+     +ER DG+EPPVQ SV
Sbjct:   23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADL-QNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264          
BLAST of 40S ribosomal protein S3a vs. UniProt/SwissProt
Match: sp|P49242|RS3A_RAT (40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2)

HSP 1 Score: 282.337 bits (721), Expect = 3.376e-94
Identity = 139/243 (57.20%), Postives = 175/243 (72.02%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSA----TTISATGEIIERPDGHEPPVQTSV 850
            DPF KK+W+ ++AP+MF  R+  +T+VT+TQGTKIAS+GLK RV  +SL +L +  E  FRKF L  EDVQG  CLT+F GM LT DKMCSMVKKWQT IE   DVKTTD + LR+F + FTKK  NQ++K +YAQ QQ++ IR  M E++  EV + D+KEVV KL  DSIGKDI + C  I+PL D  VRKVK+++KPK +L KLM+LHG+      TT   TG  +ER DG+EPPVQ SV
Sbjct:   23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADL-QNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVERADGYEPPVQESV 264          
BLAST of 40S ribosomal protein S3a vs. TrEMBL
Match: A0A183A0Z6 (40S ribosomal protein S3a OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS631 PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 3.927e-101
Identity = 146/240 (60.83%), Postives = 187/240 (77.92%), Query Frame = 2
Query:  131 SDPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGEIIERPDGHEPPVQTSV 850
            +DPF KKEW+ IRAP+MF KR+ ART+VT+TQGTKIASE LK RVVT+SLG+L+EKTE+ FRKF LQ+EDVQG QCLT+F G++LT DK+CS++ KW++TIE   DVKTTD + LR F+I+FT +      +HTYAQA +IK +R  + E+IQ EVASCD+KEVV KL  DSI +D  +  S+IFP TD  +RKVKV++KPKMDL +LMDLHG+S +  S +GE + RPD +EPP   SV
Sbjct:   22 ADPFSKKEWYDIRAPTMFSKRTCARTLVTRTQGTKIASEALKGRVVTLSLGDLHEKTEEVFRKFKLQVEDVQGRQCLTNFHGLELTRDKLCSVILKWRSTIEAHVDVKTTDGYLLRFFIISFTPRVTRFKCRHTYAQATRIKRVRARLVEIIQQEVASCDLKEVVNKLIPDSIAQDARKSASWIFPQTDTLIRKVKVLKKPKMDLARLMDLHGESKS--SGSGEGVSRPDHYEPPTVDSV 259          
BLAST of 40S ribosomal protein S3a vs. TrEMBL
Match: A0A504Z354 (40S ribosomal protein S3a OS=Fasciola gigantica OX=46835 GN=FGIG_11145 PE=3 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 8.009e-99
Identity = 144/240 (60.00%), Postives = 184/240 (76.67%), Query Frame = 2
Query:  131 SDPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGEIIERPDGHEPPVQTSV 850
            +DPF KKEW+ IRAP MF KR+ ART+VT+TQGTKIASE LK RVVT+SLG+L+EKTE+ FRKF LQ+EDVQG QCLT+F G++LT DK+CS++ KW++TIE   DVKTTD + LR F+I+FT +      +HTYAQA +IK +R  + E+IQ EV+SCD+KEVV KL  DSI  D  +  S+IFP  D  +RKVKV++KPKMDL++LMDLHG+S    +A GE + RPD +EPP   SV
Sbjct:   22 ADPFSKKEWYDIRAPVMFSKRTCARTLVTRTQGTKIASEALKGRVVTLSLGDLHEKTEEVFRKFKLQVEDVQGRQCLTNFHGLELTRDKLCSVILKWRSTIEAHVDVKTTDGYLLRFFIISFTPRVTRFKCRHTYAQATRIKRVRARLVEIIQQEVSSCDLKEVVNKLIPDSIAHDARKSASWIFPQIDTLIRKVKVLKKPKMDLSRLMDLHGESKG--AAPGESVSRPDHYEPPAVDSV 259          
BLAST of 40S ribosomal protein S3a vs. TrEMBL
Match: A0A2H1CUG1 (40S ribosomal protein S3a OS=Fasciola hepatica OX=6192 GN=D915_01300 PE=3 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 8.009e-99
Identity = 144/240 (60.00%), Postives = 184/240 (76.67%), Query Frame = 2
Query:  131 SDPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGEIIERPDGHEPPVQTSV 850
            +DPF KKEW+ IRAP MF KR+ ART+VT+TQGTKIASE LK RVVT+SLG+L+EKTE+ FRKF LQ+EDVQG QCLT+F G++LT DK+CS++ KW++TIE   DVKTTD + LR F+I+FT +      +HTYAQA +IK +R  + E+IQ EV+SCD+KEVV KL  DSI  D  +  S+IFP  D  +RKVKV++KPKMDL++LMDLHG+S    +A GE + RPD +EPP   SV
Sbjct:   22 ADPFSKKEWYDIRAPVMFSKRTCARTLVTRTQGTKIASEALKGRVVTLSLGDLHEKTEEVFRKFKLQVEDVQGRQCLTNFHGLELTRDKLCSVILKWRSTIEAHVDVKTTDGYLLRFFIISFTPRVTRFKCRHTYAQATRIKRVRARLVEIIQQEVSSCDLKEVVNKLIPDSIAHDARKSASWIFPQIDTLIRKVKVLKKPKMDLSRLMDLHGESKG--AAPGESVSRPDHYEPPAVDSV 259          
BLAST of 40S ribosomal protein S3a vs. TrEMBL
Match: C1L8J7 (40S ribosomal protein S3a OS=Schistosoma japonicum OX=6182 GN=rps3a PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 9.547e-98
Identity = 139/240 (57.92%), Postives = 183/240 (76.25%), Query Frame = 2
Query:  131 SDPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGEIIERPDGHEPPVQTSV 850
            +DPF KKEW+ I+AP+MFPKR+ ART+VT+TQGT+IASE LK RVVT+SLG+L+EK E+ FRKF LQIEDVQG  CLT+F G++LT DK+CS+V KW++TIE   DVKTTD + LR F+I FT   P   + H+YAQ  +IK IR  + E+IQ EV++CD+KEVV KL  DSI +D  +  S+I+PL +  +RKVKV+++PK DL +LM+LHG+S +T  A GE + RPD +EPP   SV
Sbjct:   22 ADPFSKKEWYDIKAPAMFPKRTCARTLVTRTQGTRIASEALKGRVVTLSLGDLSEKNEEVFRKFKLQIEDVQGRHCLTNFHGLELTRDKLCSIVVKWRSTIEAHVDVKTTDGYLLRFFIITFTPSVPRSERLHSYAQTTRIKRIRARLVEIIQQEVSTCDLKEVVNKLIPDSIAQDARKAASWIYPLGETFIRKVKVLKRPKADLARLMELHGESKST--APGETVSRPDHYEPPKVDSV 259          
BLAST of 40S ribosomal protein S3a vs. TrEMBL
Match: A0A0R3UG15 (40S ribosomal protein S3a OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS6114 PE=3 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 9.737e-98
Identity = 142/240 (59.17%), Postives = 181/240 (75.42%), Query Frame = 2
Query:  131 SDPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGEIIERPDGHEPPVQTSV 850
            +DPF KKEW+ +RAP+MF  R  ART++T+TQGTKIASEGLK RV+ +SLG+LN+KT+D FRKF LQ+EDVQG  CLT+F GM LT DK+C MV KWQ+TIE   DVKTTD + LR FVIAFTKK  +Q K H YAQ+ +IK +R  + EV+Q EV+ CD+K VV+KL  DSIG+D   + S IFPL+   VRKVK+++KPK+DL +LM+LHG+  T     GE + RPD +EPPV  +V
Sbjct:   21 TDPFAKKEWYELRAPTMFSNRVCARTLITRTQGTKIASEGLKGRVIQLSLGDLNDKTQDIFRKFKLQVEDVQGRHCLTNFHGMDLTRDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVIAFTKKQEDQ-KSHAYAQSTRIKKLRAKIVEVVQREVSRCDLKSVVQKLIPDSIGQDALNEASTIFPLSGALVRKVKILKKPKLDLGRLMELHGEGKT--DEFGEGVARPDHYEPPVVNAV 257          
BLAST of 40S ribosomal protein S3a vs. Ensembl Cavefish
Match: rps3a (ribosomal protein S3A [Source:NCBI gene;Acc:103024043])

HSP 1 Score: 285.034 bits (728), Expect = 3.882e-96
Identity = 142/245 (57.96%), Postives = 178/245 (72.65%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGD---SATTISATGEI---IERPDGHEPPVQTSV 850
            DPF KK+W+ +RAP+MF  R+  +T+VT+TQGTKIAS+GLK RV  +SL +L +  E  FRKF L  EDVQG  CLT+F GM LT DKMCSMVKKWQT IE   DVKTTD + LR+F + FTKK  NQ++K +YAQ QQ++ IR  M E++  EV + D+KEVV KL  DS+GKDI + C  I+PL D  VRKVK+++KPK DL KLM+LHG+   S+TT  A GE    +ER DG+EPPVQ SV
Sbjct:   23 DPFSKKDWYDVRAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADL-QNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVKMLKKPKFDLGKLMELHGEGGSSSTTKPAEGETGAKVERADGYEPPVQESV 266          
BLAST of 40S ribosomal protein S3a vs. Ensembl Sea Lamprey
Match: rps3a (ribosomal protein S3A [Source:NCBI gene;Acc:337240])

HSP 1 Score: 229.18 bits (583), Expect = 4.017e-75
Identity = 119/253 (47.04%), Postives = 160/253 (63.24%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTIS------ATGEI--------IERPDGHEPPVQTSV 850
            DPF KK+W+ ++AP+MF  R+  +T+VT++QGT+IAS+GLK RV   SL +L +  E  FRKF L +EDVQG  CLT+F GM LT DK+CSMVKKWQT IE   DVKTTD + LR+F I FTKK  NQ++K  YAQ QQ+++IR  M E++  EV S D+KE+V KL I S   ++  KC  +  +       V         + KLM+LHG+ A + +      A G+         +ER DG+EPPVQ +V
Sbjct:    2 DPFSKKDWYDVKAPAMFNIRNMGKTLVTRSQGTRIASDGLKGRVFEASLADL-QNDEVAFRKFKLIVEDVQGKSCLTNFHGMDLTRDKLCSMVKKWQTMIEAHVDVKTTDGYLLRLFCIGFTKKRSNQIRKTAYAQRQQVRAIRRKMVEIMTREVQSNDLKELVNKLRIRSSSNEVIFKCKIVMRVITVFAAAVLTASAFACAVGKLMELHGEGAASTAAKPASGAAGDAEGTASSTKVERGDGYEPPVQETV 253          
BLAST of 40S ribosomal protein S3a vs. Ensembl Yeast
Match: RPS1A (Ribosomal protein 10 (rp10) of the small (40S) subunit; homologous to mammalian ribosomal protein S3A, no bacterial homolog; RPS1A has a paralog, RPS1B, that arose from the whole genome duplication [Source:SGD;Acc:S000004433])

HSP 1 Score: 214.927 bits (546), Expect = 1.106e-69
Identity = 99/215 (46.05%), Postives = 145/215 (67.44%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSA 778
            DPF +KEWF I+APS F  R+  +T+V K+ G K AS+ LK RVV + L +L    + +FRK  L++++VQG   LT+F GM  TTDK+ SMV+KWQT IE    VKT+D++ LR+F IAFT+K  NQ+K+H+YAQ+  I++IR ++ E++  EV    + ++  KL  + I K+I      IFPL +  VRKVK++++PK D+  LM LHG+ +
Sbjct:   22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGS 236          
BLAST of 40S ribosomal protein S3a vs. Ensembl Yeast
Match: RPS1B (Ribosomal protein 10 (rp10) of the small (40S) subunit; homologous to mammalian ribosomal protein S3A, no bacterial homolog; RPS1B has a paralog, RPS1A, that arose from the whole genome duplication [Source:SGD;Acc:S000004528])

HSP 1 Score: 214.542 bits (545), Expect = 1.246e-69
Identity = 99/215 (46.05%), Postives = 146/215 (67.91%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSA 778
            DPF +KEWF I+APS F  R+  +T+V K+ G K AS+ LK RVV + L +L    + +FRK  L++++VQG   LT+F GM  TTDK+ SMV+KWQT IE    VKT+D++ LR+F IAFT+K  NQ+K+H+YAQ+  I++IR ++ E++  EV +  + ++  KL  + I K+I      IFPL +  VRKVK++++PK D+  LM LHG+ +
Sbjct:   22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGS 236          
BLAST of 40S ribosomal protein S3a vs. Ensembl Nematostella
Match: EDO41784 (40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:A7S3J7])

HSP 1 Score: 253.447 bits (646), Expect = 2.594e-84
Identity = 129/244 (52.87%), Postives = 173/244 (70.90%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGEI-----IERPDGHEPPVQTSV 850
            DPF KK+W+ ++APSMF  R   +T+VT+T GTKIAS+GLK RV  +SL +L +  E  FRKF L  E+VQG  CLT+F GM +TTDK+ S+VKKWQT IE   DVKTTD + LR+F I FTK+  NQ+KK  YA+  QIK+IR  M ++I  EV++ D+KEVV KL  DSIGKDI + C  I+PL D  +RKVKV++KPK D+ KLM++HG++++  + T        I+R +G EPP+Q +V
Sbjct:   22 DPFTKKDWYDVKAPSMFNIRQIGKTVVTRTAGTKIASDGLKGRVFEVSLADL-QNDEIAFRKFKLMCEEVQGRNCLTNFHGMNMTTDKLRSLVKKWQTLIEAAVDVKTTDGYLLRMFCIGFTKRRQNQIKKTAYAKHTQIKAIRKKMVDIITREVSTNDLKEVVNKLIPDSIGKDIEKSCQSIYPLHDVHIRKVKVLKKPKFDIGKLMEMHGEASSHATTTTTDETGTKIDR-EGFEPPIQDTV 263          
BLAST of 40S ribosomal protein S3a vs. Ensembl Medaka
Match: rps3a (ribosomal protein S3A [Source:NCBI gene;Acc:100049481])

HSP 1 Score: 270.396 bits (690), Expect = 2.186e-90
Identity = 135/245 (55.10%), Postives = 175/245 (71.43%), Query Frame = 2
Query:  134 DPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISA------TGEIIERPDGHEPPVQTSV 850
            DPF KK+W+ ++AP+MF  R+  +T+VT+TQGTKIAS+GLK RV  +SL +L +  E  FRKF L  EDVQG  CLT+F GM LT DKMCSMVKKWQT IE   DVKTTD + LR+F + FTKK  NQ++K +YAQ QQ++ IR  M E++  EV + D+KEVV KL  DS+GKDI + C  I+PL D  VRKVK+++KPK +L KLM+LHG+     +A      TG  +ER DG+EPP+Q +V
Sbjct:   23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADL-QNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQVRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGGAAKASGDDTGAKVERADGYEPPIQETV 266          
BLAST of 40S ribosomal protein S3a vs. Planmine SMEST
Match: SMESG000066540.1 (SMESG000066540.1)

HSP 1 Score: 498.819 bits (1283), Expect = 0.000e+0
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 2
Query:   65 MALGXXXXXXXXXXXXXXXXXXSDPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGEIIERPDGHEPPVQTSV 850
            MALGKTTKKAQKLGPKKGKKKASDPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGEIIERPDGHEPPVQTSV
Sbjct:    1 MALGKTTKKAQKLGPKKGKKKASDPFLKKEWFVIRAPSMFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGEIIERPDGHEPPVQTSV 262          
BLAST of 40S ribosomal protein S3a vs. Planmine SMEST
Match: SMESG000066537.1 (SMESG000066537.1)

HSP 1 Score: 460.685 bits (1184), Expect = 2.708e-166
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 2
Query:  179 MFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGEIIERPDGHEPPVQTSV 850
            MFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGEIIERPDGHEPPVQTSV
Sbjct:    1 MFPKRSFARTIVTKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLTSFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPNQLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIARKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGEIIERPDGHEPPVQTSV 224          
The following BLAST results are available for this feature:
BLAST of 40S ribosomal protein S3a vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RPS3A3.943e-9556.79ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC... [more]
RPS3A6.778e-8857.21ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC... [more]
RPS3A1.505e-8657.02ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC... [more]
RPS3A1.505e-8657.02ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC... [more]
RPS3A2.911e-7358.25ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC... [more]
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BLAST of 40S ribosomal protein S3a vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
rps-14.077e-9356.4940S ribosomal protein S3a [Source:UniProtKB/Swiss... [more]
rps-14.077e-9356.4940S ribosomal protein S3a [Source:UniProtKB/Swiss... [more]
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BLAST of 40S ribosomal protein S3a vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 3
Match NameE-valueIdentityDescription
RpS3A9.447e-8147.97gene:FBgn0017545 transcript:FBtr0308296[more]
RpS3A9.447e-8147.97gene:FBgn0017545 transcript:FBtr0089175[more]
RpS3A2.569e-6247.80gene:FBgn0017545 transcript:FBtr0089176[more]
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BLAST of 40S ribosomal protein S3a vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rps3a6.633e-9555.28ribosomal protein S3A [Source:NCBI gene;Acc:337240... [more]
rps3a6.633e-9555.28ribosomal protein S3A [Source:NCBI gene;Acc:337240... [more]
rps3a6.633e-9555.28ribosomal protein S3A [Source:NCBI gene;Acc:337240... [more]
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BLAST of 40S ribosomal protein S3a vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ppp6r39.219e-9456.38protein phosphatase 6 regulatory subunit 3 [Source... [more]
ppp6r31.580e-6358.08protein phosphatase 6 regulatory subunit 3 [Source... [more]
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BLAST of 40S ribosomal protein S3a vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Rps3a15.152e-9556.79ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:... [more]
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BLAST of 40S ribosomal protein S3a vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q5DAA3|RS3A_SCHJA4.140e-10057.9240S ribosomal protein S3a OS=Schistosoma japonicum... [more]
sp|P61246|RS3A_FELCA1.848e-9456.7940S ribosomal protein S3a (Fragment) OS=Felis catu... [more]
sp|P61247|RS3A_HUMAN1.894e-9456.7940S ribosomal protein S3a OS=Homo sapiens OX=9606 ... [more]
sp|Q56JV9|RS3A_BOVIN1.894e-9456.7940S ribosomal protein S3a OS=Bos taurus OX=9913 GN... [more]
sp|P49242|RS3A_RAT3.376e-9457.2040S ribosomal protein S3a OS=Rattus norvegicus OX=... [more]
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BLAST of 40S ribosomal protein S3a vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A183A0Z63.927e-10160.8340S ribosomal protein S3a OS=Echinostoma caproni O... [more]
A0A504Z3548.009e-9960.0040S ribosomal protein S3a OS=Fasciola gigantica OX... [more]
A0A2H1CUG18.009e-9960.0040S ribosomal protein S3a OS=Fasciola hepatica OX=... [more]
C1L8J79.547e-9857.9240S ribosomal protein S3a OS=Schistosoma japonicum... [more]
A0A0R3UG159.737e-9859.1740S ribosomal protein S3a OS=Mesocestoides corti O... [more]
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BLAST of 40S ribosomal protein S3a vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rps3a3.882e-9657.96ribosomal protein S3A [Source:NCBI gene;Acc:103024... [more]
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BLAST of 40S ribosomal protein S3a vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rps3a4.017e-7547.04ribosomal protein S3A [Source:NCBI gene;Acc:337240... [more]
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BLAST of 40S ribosomal protein S3a vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 2
Match NameE-valueIdentityDescription
RPS1A1.106e-6946.05Ribosomal protein 10 (rp10) of the small (40S) sub... [more]
RPS1B1.246e-6946.05Ribosomal protein 10 (rp10) of the small (40S) sub... [more]
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BLAST of 40S ribosomal protein S3a vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO417842.594e-8452.8740S ribosomal protein S3a [Source:UniProtKB/Swiss... [more]
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BLAST of 40S ribosomal protein S3a vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rps3a2.186e-9055.10ribosomal protein S3A [Source:NCBI gene;Acc:100049... [more]
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BLAST of 40S ribosomal protein S3a vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000066540.10.000e+0100.00SMESG000066540.1[more]
SMESG000066537.12.708e-166100.00SMESG000066537.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30019273 ID=SMED30019273|Name=40S ribosomal protein S3a|organism=Schmidtea mediterranea sexual|type=transcript|length=882bp
TAACAAAACAACTAATTTGTTTAAATTATATTAAAGTAGTTAATATAAAA
ATATTTAAATTAAAATGGCTTTAGGTAAAACAACCAAAAAGGCACAGAAA
CTTGGACCCAAGAAGGGAAAGAAGAAGGCATCTGATCCATTTTTGAAAAA
AGAATGGTTTGTTATTAGAGCACCATCAATGTTCCCTAAAAGATCATTTG
CCAGAACTATCGTTACTAAAACTCAAGGAACTAAAATTGCCAGTGAAGGC
CTTAAAAACCGAGTCGTAACAATGAGTTTAGGAGAATTGAATGAGAAAAC
TGAGGATACCTTCAGAAAATTCTCACTTCAAATTGAAGATGTTCAAGGAA
ATCAATGTTTAACTTCATTCAAAGGAATGCAATTGACAACTGACAAAATG
TGCTCAATGGTCAAAAAATGGCAAACAACCATTGAATGCTTTGCTGATGT
AAAGACAACTGATAACTTCCATTTGAGAGTGTTTGTTATCGCTTTCACCA
AAAAAGCACCAAATCAATTGAAAAAGCACACTTATGCACAAGCCCAACAA
ATCAAATCAATTAGAGATATTATGCGCGAAGTGATTCAAACTGAAGTAGC
TTCATGCGATATCAAAGAAGTAGTGAAGAAGCTTTGCATTGATTCAATTG
GAAAAGATATTGCACGAAAATGTTCTTACATTTTCCCATTGACTGACTGC
TGTGTAAGAAAAGTCAAGGTCATTAGAAAACCAAAAATGGATTTGACTAA
ACTCATGGATCTACACGGAGACTCTGCAACTACTATTTCAGCAACAGGTG
AAATTATTGAGCGACCTGATGGACATGAACCTCCAGTTCAAACTTCTGTT
TAAATAAATATAAATTTTTGGATTAAAAAAAA
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protein sequence of SMED30019273-orf-1

>SMED30019273-orf-1 ID=SMED30019273-orf-1|Name=SMED30019273-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=263bp
MALGKTTKKAQKLGPKKGKKKASDPFLKKEWFVIRAPSMFPKRSFARTIV
TKTQGTKIASEGLKNRVVTMSLGELNEKTEDTFRKFSLQIEDVQGNQCLT
SFKGMQLTTDKMCSMVKKWQTTIECFADVKTTDNFHLRVFVIAFTKKAPN
QLKKHTYAQAQQIKSIRDIMREVIQTEVASCDIKEVVKKLCIDSIGKDIA
RKCSYIFPLTDCCVRKVKVIRKPKMDLTKLMDLHGDSATTISATGEIIER
PDGHEPPVQTSV*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0022627cytosolic small ribosomal subunit
GO:0005840ribosome
GO:0005737cytoplasm
GO:0030529intracellular ribonucleoprotein complex
GO:0005622intracellular
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000429neoblast
PLANA:0002032epidermal cell
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR001593Ribosomal_S3Ae
Vocabulary: biological process
TermDefinition
GO:0006412translation
Vocabulary: molecular function
TermDefinition
GO:0003735structural constituent of ribosome
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001593Ribosomal protein S3AeSMARTSM01397Ribosomal_S3Ae_2coord: 1..185
e-value: 4.8E-87
score: 305.2
IPR001593Ribosomal protein S3AePFAMPF01015Ribosomal_S3Aecoord: 1..185
e-value: 8.9E-69
score: 231.1
NoneNo IPR availablePANTHERPTHR1183040S RIBOSOMAL PROTEIN S3Acoord: 1..224
NoneNo IPR availablePANTHERPTHR11830:SF2640S RIBOSOMAL PROTEIN S3Acoord: 1..224