Chromosome transmission fidelity factor 18
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30019080 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Human
Match: CHTF18 (chromosome transmission fidelity factor 18 [Source:HGNC Symbol;Acc:HGNC:18435]) HSP 1 Score: 334.724 bits (857), Expect = 4.337e-100 Identity = 256/836 (30.62%), Postives = 402/836 (48.09%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYV--KVNNEINDFSNSTMNVSFKVASQ------SFYSI------------LDEANEL------FKKRERKSIQH--------SENISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFN--------RNTKFTDKLIYNFNTGNKGTNFEEVLQ------INPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLK-----------INRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKR------------SYLATTGKNSN--ELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADIN--------------------RYKKXXXXXXXXXXXXXXRIGFIMQKA--EEYKNKSTINCV-------------AKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 P D V+VT + G R Y+ + + S ++V ++ Q S S+ L EA +L + E ++ Q ++ ASS LWV ++APR Y +LLS + NR LL WLK WD VF R + ++ K + E+VL+ ++P Q P +KV LL GPPGLGKTTLA ++AR GY VE+NASDDRSPEVF+ RIEA TQ+ +G KP CL++DEIDG VAA+N+L++ + + VG + P + RPIICICND +A SLRQL+ +++ P ++L++RL E+ + + D +L + + ++ DIR+C+NTLQF+ + + + V +G KD G+F +WQ++F P +R + L G + + R +L A SAG+ +K++ G+ +N+L + R +D L + A DW+ F+D+ + Q+F++ RY + FH+ FAS+ I +P+S A +M+++ + V+ ++ + Q ++ L L++I+ P +LRP++TQLYS++EK L + V M++ L Y Q+R + QY Y L PN+EE+ +F ++K LTY TKQLIA EI E+++RA+ + + R+ IM++A EE K V A +D+ R+G G S VWF+F EG NA+RR + ++DL Sbjct: 172 PILEDYVHVTSTEGVRAYLVLRADPMAPGVQGSLLHVPWRGGGQLDLLGVSLASLKKQVDGERRERLLQEAQKLSDTLHSLRSGEEEAAQPLGAPEEEPTDGQDASSHCLWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHERPSRKPRPSVEPARVSKEATAPGKWKSHEQVLEEMLEAGLDP-SQRPKQKVALLCGPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAA--TQMESVLGAGG----KPNCLVIDEIDGAPVAAINVLLSIL-----NRKGPQEVGPQGPAVPSGGGRRRRAEGGLLMRPIICICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDNDIRACINTLQFLYSRGQRELSVRD-VQATRVGLKDQRRGLFSVWQEVFQLPRAQRRRVGQDPALPADTLLLGDGDAGSLTSASQRFYRVLHAAASAGEHEKVVQGLFDNFLRL-RLRDSSLGAVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHT--PRITFPSSQQEAQNRMSQMRNLIQTLVSGIAPATRSRATPQALLLDALCLLLDILAP-KLRPVSTQLYSTREKQQLASLVGTMLAYSLTYRQERTPDGQYIYRLEPNVEELCRFP-ELPARKPLTYQTKQLIAREIEVEKMRRAEASARVENSPQVDGSPPGLEGLLGGIGEKGVHRPAPRNHEQRLEHIMRRAAREEQPEKDFFGRVVVRSTAVPSAGDTAPEQDSVERRMGTAVGRSE---------------VWFRFNEGVSNAVRRSLYIRDL 974
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Human
Match: CHTF18 (chromosome transmission fidelity factor 18 [Source:HGNC Symbol;Acc:HGNC:18435]) HSP 1 Score: 334.339 bits (856), Expect = 4.707e-100 Identity = 256/836 (30.62%), Postives = 402/836 (48.09%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYV--KVNNEINDFSNSTMNVSFKVASQ------SFYSI------------LDEANEL------FKKRERKSIQH--------SENISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFN--------RNTKFTDKLIYNFNTGNKGTNFEEVLQ------INPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLK-----------INRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKR------------SYLATTGKNSN--ELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADIN--------------------RYKKXXXXXXXXXXXXXXRIGFIMQKA--EEYKNKSTINCV-------------AKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 P D V+VT + G R Y+ + + S ++V ++ Q S S+ L EA +L + E ++ Q ++ ASS LWV ++APR Y +LLS + NR LL WLK WD VF R + ++ K + E+VL+ ++P Q P +KV LL GPPGLGKTTLA ++AR GY VE+NASDDRSPEVF+ RIEA TQ+ +G KP CL++DEIDG VAA+N+L++ + + VG + P + RPIICICND +A SLRQL+ +++ P ++L++RL E+ + + D +L + + ++ DIR+C+NTLQF+ + + + V +G KD G+F +WQ++F P +R + L G + + R +L A SAG+ +K++ G+ +N+L + R +D L + A DW+ F+D+ + Q+F++ RY + FH+ FAS+ I +P+S A +M+++ + V+ ++ + Q ++ L L++I+ P +LRP++TQLYS++EK L + V M++ L Y Q+R + QY Y L PN+EE+ +F ++K LTY TKQLIA EI E+++RA+ + + R+ IM++A EE K V A +D+ R+G G S VWF+F EG NA+RR + ++DL Sbjct: 172 PILEDYVHVTSTEGVRAYLVLRADPMAPGVQGSLLHVPWRGGGQLDLLGVSLASLKKQVDGERRERLLQEAQKLSDTLHSLRSGEEEAAQPLGAPEEEPTDGQDASSHCLWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHERPSRKPRPSVEPARVSKEATAPGKWKSHEQVLEEMLEAGLDP-SQRPKQKVALLCGPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAA--TQMESVLGAGG----KPNCLVIDEIDGAPVAAINVLLSIL-----NRKGPQEVGPQGPAVPSGGGRRRRAEGGLLMRPIICICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDNDIRACINTLQFLYSRGQRELSVRD-VQATRVGLKDQRRGLFSVWQEVFQLPRAQRRRVGQDPALPADTLLLGDGDAGSLTSASQRFYRVLHAAASAGEHEKVVQGLFDNFLRL-RLRDSSLGAVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHT--PRITFPSSQQEAQNRMSQMRNLIQTLVSGIAPATRSRATPQALLLDALCLLLDILAP-KLRPVSTQLYSTREKQQLASLVGTMLAYSLTYRQERTPDGQYIYRLEPNVEELCRFP-ELPARKPLTYQTKQLIAREIEVEKMRRAEASARVENSPQVDGSPPGLEGLLGGIGEKGVHRPAPRNHEQRLEHIMRRAAREEQPEKDFFGRVVVRSTAVPSAGDTAPEQDSVERRMGTAVGRSE---------------VWFRFNEGVSNAVRRSLYIRDL 974
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Human
Match: CHTF18 (chromosome transmission fidelity factor 18 [Source:HGNC Symbol;Acc:HGNC:18435]) HSP 1 Score: 334.724 bits (857), Expect = 6.357e-100 Identity = 256/836 (30.62%), Postives = 402/836 (48.09%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYV--KVNNEINDFSNSTMNVSFKVASQ------SFYSI------------LDEANEL------FKKRERKSIQH--------SENISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFN--------RNTKFTDKLIYNFNTGNKGTNFEEVLQ------INPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLK-----------INRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKR------------SYLATTGKNSN--ELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADIN--------------------RYKKXXXXXXXXXXXXXXRIGFIMQKA--EEYKNKSTINCV-------------AKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 P D V+VT + G R Y+ + + S ++V ++ Q S S+ L EA +L + E ++ Q ++ ASS LWV ++APR Y +LLS + NR LL WLK WD VF R + ++ K + E+VL+ ++P Q P +KV LL GPPGLGKTTLA ++AR GY VE+NASDDRSPEVF+ RIEA TQ+ +G KP CL++DEIDG VAA+N+L++ + + VG + P + RPIICICND +A SLRQL+ +++ P ++L++RL E+ + + D +L + + ++ DIR+C+NTLQF+ + + + V +G KD G+F +WQ++F P +R + L G + + R +L A SAG+ +K++ G+ +N+L + R +D L + A DW+ F+D+ + Q+F++ RY + FH+ FAS+ I +P+S A +M+++ + V+ ++ + Q ++ L L++I+ P +LRP++TQLYS++EK L + V M++ L Y Q+R + QY Y L PN+EE+ +F ++K LTY TKQLIA EI E+++RA+ + + R+ IM++A EE K V A +D+ R+G G S VWF+F EG NA+RR + ++DL Sbjct: 200 PILEDYVHVTSTEGVRAYLVLRADPMAPGVQGSLLHVPWRGGGQLDLLGVSLASLKKQVDGERRERLLQEAQKLSDTLHSLRSGEEEAAQPLGAPEEEPTDGQDASSHCLWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHERPSRKPRPSVEPARVSKEATAPGKWKSHEQVLEEMLEAGLDP-SQRPKQKVALLCGPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAA--TQMESVLGAGG----KPNCLVIDEIDGAPVAAINVLLSIL-----NRKGPQEVGPQGPAVPSGGGRRRRAEGGLLMRPIICICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDNDIRACINTLQFLYSRGQRELSVRD-VQATRVGLKDQRRGLFSVWQEVFQLPRAQRRRVGQDPALPADTLLLGDGDAGSLTSASQRFYRVLHAAASAGEHEKVVQGLFDNFLRL-RLRDSSLGAVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHT--PRITFPSSQQEAQNRMSQMRNLIQTLVSGIAPATRSRATPQALLLDALCLLLDILAP-KLRPVSTQLYSTREKQQLASLVGTMLAYSLTYRQERTPDGQYIYRLEPNVEELCRFP-ELPARKPLTYQTKQLIAREIEVEKMRRAEASARVENSPQVDGSPPGLEGLLGGIGEKGVHRPAPRNHEQRLEHIMRRAAREEQPEKDFFGRVVVRSTAVPSAGDTAPEQDSVERRMGTAVGRSE---------------VWFRFNEGVSNAVRRSLYIRDL 1002
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Human
Match: CHTF18 (chromosome transmission fidelity factor 18 [Source:HGNC Symbol;Acc:HGNC:18435]) HSP 1 Score: 322.783 bits (826), Expect = 1.761e-94 Identity = 258/855 (30.18%), Postives = 401/855 (46.90%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYV--KVNNEINDFSNSTMNVSFKVASQ------SFYSI------------LDEANEL----FKKRERKSIQH--------SENISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFN--------RNTKFTDKLIYNFNTGNKGTNFEEVLQ------INPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLK-----------INRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRS-----------------------------------YLATTGKNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADIN--------------------RYKKXXXXXXXXXXXXXXRIGFIMQKA--EEYKNKSTINCV-------------AKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 P D V+VT + G R Y+ + + S ++V ++ Q S S+ L EA +L + E ++ Q ++ ASS LWV ++APR Y +LLS + NR LL WLK WD VF R + ++ K + E+VL+ ++P Q P +KV LL GPPGLGKTTLA ++AR GY VE+NASDDRSPEVF+ RIEA TQ+ +G KP CL++DEIDG VAA+N+L++ + + VG + P + RPIICICND +A SLRQL+ +++ P ++L++RL E + D +L + + ++ DIR+C+NTLQF+ + + + V +G KD G+F +WQ++F P +RS LA T + + R +L A SAG+ +K++ G+ +N+L + R +D L + A DW+ F+D+ + Q+F++ RY + FH+ FAS+ I +P+S A +M+++ + V+ ++ + Q ++ L L++I+ P +LRP++TQLYS++EK L + V M++ L Y Q+R + QY Y L PN+EE+ +F ++K LTY TKQLIA EI E+++RA+ + + R+ IM++A EE K V A +D+ R+G G S VWF+F EG NA+RR + ++DL Sbjct: 369 PILEDYVHVTSTEGVRAYLVLRADPMAPGVQGSLLHVPWRGGGQLDLLGVSLASLKKQVDGERRERLLQEAQKLSDTLHRSGEEEAAQPLGAPEEEPTDGQDASSHCLWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHERPSRKPRPSVEPARVSKEATAPGKWKSHEQVLEEMLEAGLDP-SQRPKQKVALLCGPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAA--TQMESVLGAGG----KPNCLVIDEIDGAPVAAINVLLSIL-----NRKGPQEVGPQGPAVPSGGGRRRRAEGGLLMRPIICICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQ-----EGMRADPGVLAALCEKTDNDIRACINTLQFLYSRGQRELSVRD-VQATRVGLKDQRRGLFSVWQEVFQLPRAQRSSQHVSVLTCHGTPGDAGLVVLQDMGDAGLGLWDVLLLAWTRRGT--FPGRFYRVLHAAASAGEHEKVVQGLFDNFLRL-RLRDSSLGAVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHT--PRITFPSSQQEAQNRMSQMRNLIQTLVSGIAPATRSRATPQALLLDALCLLLDILAP-KLRPVSTQLYSTREKQQLASLVGTMLAYSLTYRQERTPDGQYIYRLEPNVEELCRFP-ELPARKPLTYQTKQLIAREIEVEKMRRAEASARVENSPQVDGSPPGLEGLLGGIGEKGVHRPAPRNHEQRLEHIMRRAAREEQPEKDFFGRVVVRSTAVPSAGDTAPEQDSVERRMGTAVGRSE---------------VWFRFNEGVSNAVRRSLYIRDL 1183
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Human
Match: CHTF18 (chromosome transmission fidelity factor 18 [Source:HGNC Symbol;Acc:HGNC:18435]) HSP 1 Score: 120.168 bits (300), Expect = 3.910e-28 Identity = 100/278 (35.97%), Postives = 137/278 (49.28%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYV--KVNNEINDFSNSTMNVSFKVASQ------SFYSI------------LDEANEL------FKKRERKSIQH--------SENISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFN--------RNTKFTDKLIYNFNTGNKGTNFEEVLQ------INPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGV 956 P D V+VT + G R Y+ + + S ++V ++ Q S S+ L EA +L + E ++ Q ++ ASS LWV ++APR Y +LLS + NR LL WLK WD VF R + ++ K + E+VL+ ++P Q P +KV LL GPPGLGKTTLA ++AR GY VE+NASDDRSPEVF+ RIEA TQ+ +G KP CL++DEIDG V Sbjct: 173 PILEDYVHVTSTEGVRAYLVLRADPMAPGVQGSLLHVPWRGGGQLDLLGVSLASLKKQVDGERRERLLQEAQKLSDTLHSLRSGEEEAAQPLGAPEEEPTDGQDASSHCLWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHERPSRKPRPSVEPARVSKEATAPGKWKSHEQVLEEMLEAGLDPS-QRPKQKVALLCGPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAA--TQMESVLGAGG----KPNCLVIDEIDGAPV 443
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Celegans
Match: ctf-18 (Chromosome Transmission Fidelity factor homolog [Source:UniProtKB/TrEMBL;Acc:Q21350]) HSP 1 Score: 263.462 bits (672), Expect = 1.659e-75 Identity = 191/618 (30.91%), Postives = 311/618 (50.32%), Query Frame = 3 Query: 378 KVASQSFYSILDEANELFKKRERKSIQHSE------------------NISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQI-NPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQF--IEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLATTGKNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMV-DAADWMVFNDMTNVYINSKQAFEMFRYKENIISFF---HLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQS--RQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIK 2150 +V ++F SI E+ L K +E ++ E N S +LWV KY + + DLLS + NR++L+WLK WD+ VF++ D L+ + G EVL + N K + P K++LLSGP GLGK+TLA+IVAR GY +++NASD R+ +E T + D +P CLILDEIDGT + + LV I A+ GKK I RPII ICN+LY +LR LR + + ++++ + L +RL EI E L D + LR + ++ D+R +NTLQ+ + + N + L+ + +K IF+ W I L + A G S + R +I ++ G ++ +SG+H NYL + G++ A+ W +F D ++S Q + + +Y + SFF HL+ A+ A +P I YP + N + QK K + ++ S Q + ++E++ +LP++VNI++P ++P+N LY+ +E TV+IM GL YT + + Q ++ P+I+ ++ F L+ + L +T+Q+IA++I R++ Sbjct: 208 RVGFRAFQSICQESERLSKLKEESRVKEQEAEFSRMLKETETPSEYENNKSHPESSLWVNKYEAKNFSDLLSDSTVNRNILTWLKMWDECVFHQKV---DDLLASL-----GEKEREVLHMDNGKIRRPSSKMLLLSGPAGLGKSTLARIVARQAGYSTIDVNASDARTVADLNKVLEGAVKTSRTLDADQ------RPACLILDEIDGTPIDTIRHLVRCIQAT----------GKKA------IRRPIIGICNNLYTPALRDLRGVAWCVQLVATKQDVLAKRLEEICDRERLRCDLSTLRKLCELCANDMRHSINTLQWVAVAARKSNRAIGMKLIHEVIEKEKGGSASIFEHWSSIL---ELSKHTDAKGGIKS--VRERIFDIERISADHGGEERFVSGLHANYLVTLPI------GVIRKASTWFLFYDDIQKIVHSLQNWSVLKY---VFSFFVSLHLNIATHARVP--IAYPQLEQNIF---QKTKE-SEETISAVRSCGQSTRGAPKKELLLDILPFIVNIVQP-PIKPMNESLYNQRELATFNQTVSIMCDYGLTYTATMVKD-QVNWLFTPSIDILTMFPLDGPKRPYLANATRQMIAHKITLMRVR 773
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Celegans
Match: ctf-18 (Chromosome Transmission Fidelity factor homolog [Source:UniProtKB/TrEMBL;Acc:Q21350]) HSP 1 Score: 263.462 bits (672), Expect = 1.659e-75 Identity = 191/618 (30.91%), Postives = 311/618 (50.32%), Query Frame = 3 Query: 378 KVASQSFYSILDEANELFKKRERKSIQHSE------------------NISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQI-NPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQF--IEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLATTGKNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMV-DAADWMVFNDMTNVYINSKQAFEMFRYKENIISFF---HLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQS--RQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIK 2150 +V ++F SI E+ L K +E ++ E N S +LWV KY + + DLLS + NR++L+WLK WD+ VF++ D L+ + G EVL + N K + P K++LLSGP GLGK+TLA+IVAR GY +++NASD R+ +E T + D +P CLILDEIDGT + + LV I A+ GKK I RPII ICN+LY +LR LR + + ++++ + L +RL EI E L D + LR + ++ D+R +NTLQ+ + + N + L+ + +K IF+ W I L + A G S + R +I ++ G ++ +SG+H NYL + G++ A+ W +F D ++S Q + + +Y + SFF HL+ A+ A +P I YP + N + QK K + ++ S Q + ++E++ +LP++VNI++P ++P+N LY+ +E TV+IM GL YT + + Q ++ P+I+ ++ F L+ + L +T+Q+IA++I R++ Sbjct: 208 RVGFRAFQSICQESERLSKLKEESRVKEQEAEFSRMLKETETPSEYENNKSHPESSLWVNKYEAKNFSDLLSDSTVNRNILTWLKMWDECVFHQKV---DDLLASL-----GEKEREVLHMDNGKIRRPSSKMLLLSGPAGLGKSTLARIVARQAGYSTIDVNASDARTVADLNKVLEGAVKTSRTLDADQ------RPACLILDEIDGTPIDTIRHLVRCIQAT----------GKKA------IRRPIIGICNNLYTPALRDLRGVAWCVQLVATKQDVLAKRLEEICDRERLRCDLSTLRKLCELCANDMRHSINTLQWVAVAARKSNRAIGMKLIHEVIEKEKGGSASIFEHWSSIL---ELSKHTDAKGGIKS--VRERIFDIERISADHGGEERFVSGLHANYLVTLPI------GVIRKASTWFLFYDDIQKIVHSLQNWSVLKY---VFSFFVSLHLNIATHARVP--IAYPQLEQNIF---QKTKE-SEETISAVRSCGQSTRGAPKKELLLDILPFIVNIVQP-PIKPMNESLYNQRELATFNQTVSIMCDYGLTYTATMVKD-QVNWLFTPSIDILTMFPLDGPKRPYLANATRQMIAHKITLMRVR 773
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Celegans
Match: ctf-18 (Chromosome Transmission Fidelity factor homolog [Source:UniProtKB/TrEMBL;Acc:Q21350]) HSP 1 Score: 263.462 bits (672), Expect = 1.659e-75 Identity = 191/618 (30.91%), Postives = 311/618 (50.32%), Query Frame = 3 Query: 378 KVASQSFYSILDEANELFKKRERKSIQHSE------------------NISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQI-NPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQF--IEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLATTGKNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMV-DAADWMVFNDMTNVYINSKQAFEMFRYKENIISFF---HLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQS--RQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIK 2150 +V ++F SI E+ L K +E ++ E N S +LWV KY + + DLLS + NR++L+WLK WD+ VF++ D L+ + G EVL + N K + P K++LLSGP GLGK+TLA+IVAR GY +++NASD R+ +E T + D +P CLILDEIDGT + + LV I A+ GKK I RPII ICN+LY +LR LR + + ++++ + L +RL EI E L D + LR + ++ D+R +NTLQ+ + + N + L+ + +K IF+ W I L + A G S + R +I ++ G ++ +SG+H NYL + G++ A+ W +F D ++S Q + + +Y + SFF HL+ A+ A +P I YP + N + QK K + ++ S Q + ++E++ +LP++VNI++P ++P+N LY+ +E TV+IM GL YT + + Q ++ P+I+ ++ F L+ + L +T+Q+IA++I R++ Sbjct: 208 RVGFRAFQSICQESERLSKLKEESRVKEQEAEFSRMLKETETPSEYENNKSHPESSLWVNKYEAKNFSDLLSDSTVNRNILTWLKMWDECVFHQKV---DDLLASL-----GEKEREVLHMDNGKIRRPSSKMLLLSGPAGLGKSTLARIVARQAGYSTIDVNASDARTVADLNKVLEGAVKTSRTLDADQ------RPACLILDEIDGTPIDTIRHLVRCIQAT----------GKKA------IRRPIIGICNNLYTPALRDLRGVAWCVQLVATKQDVLAKRLEEICDRERLRCDLSTLRKLCELCANDMRHSINTLQWVAVAARKSNRAIGMKLIHEVIEKEKGGSASIFEHWSSIL---ELSKHTDAKGGIKS--VRERIFDIERISADHGGEERFVSGLHANYLVTLPI------GVIRKASTWFLFYDDIQKIVHSLQNWSVLKY---VFSFFVSLHLNIATHARVP--IAYPQLEQNIF---QKTKE-SEETISAVRSCGQSTRGAPKKELLLDILPFIVNIVQP-PIKPMNESLYNQRELATFNQTVSIMCDYGLTYTATMVKD-QVNWLFTPSIDILTMFPLDGPKRPYLANATRQMIAHKITLMRVR 773
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Celegans
Match: ctf-18 (Chromosome Transmission Fidelity factor homolog [Source:UniProtKB/TrEMBL;Acc:Q21350]) HSP 1 Score: 263.462 bits (672), Expect = 1.659e-75 Identity = 191/618 (30.91%), Postives = 311/618 (50.32%), Query Frame = 3 Query: 378 KVASQSFYSILDEANELFKKRERKSIQHSE------------------NISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQI-NPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQF--IEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLATTGKNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMV-DAADWMVFNDMTNVYINSKQAFEMFRYKENIISFF---HLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQS--RQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIK 2150 +V ++F SI E+ L K +E ++ E N S +LWV KY + + DLLS + NR++L+WLK WD+ VF++ D L+ + G EVL + N K + P K++LLSGP GLGK+TLA+IVAR GY +++NASD R+ +E T + D +P CLILDEIDGT + + LV I A+ GKK I RPII ICN+LY +LR LR + + ++++ + L +RL EI E L D + LR + ++ D+R +NTLQ+ + + N + L+ + +K IF+ W I L + A G S + R +I ++ G ++ +SG+H NYL + G++ A+ W +F D ++S Q + + +Y + SFF HL+ A+ A +P I YP + N + QK K + ++ S Q + ++E++ +LP++VNI++P ++P+N LY+ +E TV+IM GL YT + + Q ++ P+I+ ++ F L+ + L +T+Q+IA++I R++ Sbjct: 208 RVGFRAFQSICQESERLSKLKEESRVKEQEAEFSRMLKETETPSEYENNKSHPESSLWVNKYEAKNFSDLLSDSTVNRNILTWLKMWDECVFHQKV---DDLLASL-----GEKEREVLHMDNGKIRRPSSKMLLLSGPAGLGKSTLARIVARQAGYSTIDVNASDARTVADLNKVLEGAVKTSRTLDADQ------RPACLILDEIDGTPIDTIRHLVRCIQAT----------GKKA------IRRPIIGICNNLYTPALRDLRGVAWCVQLVATKQDVLAKRLEEICDRERLRCDLSTLRKLCELCANDMRHSINTLQWVAVAARKSNRAIGMKLIHEVIEKEKGGSASIFEHWSSIL---ELSKHTDAKGGIKS--VRERIFDIERISADHGGEERFVSGLHANYLVTLPI------GVIRKASTWFLFYDDIQKIVHSLQNWSVLKY---VFSFFVSLHLNIATHARVP--IAYPQLEQNIF---QKTKE-SEETISAVRSCGQSTRGAPKKELLLDILPFIVNIVQP-PIKPMNESLYNQRELATFNQTVSIMCDYGLTYTATMVKD-QVNWLFTPSIDILTMFPLDGPKRPYLANATRQMIAHKITLMRVR 773
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Celegans
Match: rfc-1 (Replication factor C subunit 1 [Source:UniProtKB/TrEMBL;Acc:Q18841]) HSP 1 Score: 110.538 bits (275), Expect = 1.552e-24 Identity = 109/442 (24.66%), Postives = 179/442 (40.50%), Query Frame = 3 Query: 495 WVTKYAPRKYVDLLSS---ESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQL-----MKPCC----------LILDEIDGTGV----AAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLATTGKNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQ---GMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPT 1745 WV KY P++ +L+ +S LL W+K W KH K + + GT+F K LLSG PG+GKTT A + + +G VE+NASD RS + + +I L SG+ Q+ K C LI+DE+DG A ++ L+ I S KI PIICICND +R L CY ++ P + R+ I E ++ L +I++S D+R + LQ + + + IN QKD+ + F + + TT E+ + I+ L + +NYL++ K +Q G+ AAD++ D+ + I ++++ ++++IS + A+ L + I++P+ Sbjct: 280 WVDKYKPKRMGELVGQNGDKSPINKLLEWIKDWAKHNLGEGAKIKKPKPAPWMSSQDGTSF---------------KAALLSGSPGVGKTTCAYMACQQLGLQLVEMNASDVRSKKHLEAKIGEL----------SGSHQIEQFFGAKKCAPQDNQKVHHILIMDEVDGMSGNEDRAGISELIQIIKES-------------------KI--PIICICNDRQHPKIRTLANYCYDLRFPKPRVETIRSRMMTICSQEKMKIGKEELDEIIELSGHDVRQTIYNLQ---------MRSKGVGAKIN--QKDMAVDAFSAARRLLDS--------RTTLMEKQEMFFTDYGIMPLF------------VQDNYLNMKNEKHSPIQAIRGIRKAADFISLGDLIDRQIRGGGSWKLLN-EQSMISAALPAIATGGHLKAMIQFPS 643
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Fly
Match: cutlet (gene:FBgn0015376 transcript:FBtr0077541) HSP 1 Score: 314.309 bits (804), Expect = 8.373e-93 Identity = 231/709 (32.58%), Postives = 354/709 (49.93%), Query Frame = 3 Query: 468 NISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNR--NTKFTDKLIY-----------NFNTGNKGTN-FE-----------EVLQINPKDQM--PVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQL-GISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLATTGKNSNELA----------TRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQK-------MKSICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKKXXXXXXXXXXXXXXRIGFIMQKAEEYK-NKSTINCVAKYKDAYNFRLG--PKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 N ++ LWV KY PRKY+DLLS E NRSLL WLK WDK VF + ++K + + N+ NK T FE + L N D + P++KV LL GPPGLGKTTLA +AR GY EINASDDRSPE FK +E N TQ+ + N+ +P C++LDEIDG +++ LV I S+ K G K E + LK RPIICICND+Y +LR LR + +V+ P D +L RL +I E L+ D L + + S D+RSC++++QF + + + V N N+GQKD G+F +W IF R L T +E A TR +N+L + S+GD +++ G++ENYL + D G+ +A W F D I+ +Q + ++ Y + +HL FA+ A I +P T + QK +++C T+ + Q ++ +P L I+ P +LR + QL S KE+ L++T+ +M+ GL + Q + E Y + P+++ +S F + L Y ++QLIA E+ ERI+RA S + + + ++ +Q + + S ++ K + +F G K ST + +I+ P+W+++KEG+ NA+R+ V + +L Sbjct: 313 NANSEPGRLWVDKYKPRKYIDLLSDEMTNRSLLYWLKMWDKVVFGKAFHSKREQEAVTGEGGTAGGAANQLNSFNKRTGKFESNGGWRQRKSRQALNTN-VDALGRPMQKVALLCGPPGLGKTTLAHTIARHAGYNVREINASDDRSPEAFKLALE--NGTQMSSVLNED-----KRPNCIVLDEIDGAPRQSIDYLVKFI--SDAVYTKVKAKGAKAEHNVLK--RPIICICNDVYDPALRPLRQVAFVVTFPPIDAARLAERLVKIAFKEQLKTDFGSLIALAEKSGNDVRSCISSMQFFNAQKHS--LTLQDVLNNNLGQKDRHQGLFAVWDAIF-RIQRPRKTLHTDANKVDEPAQVTMTNTSVTTRVRNVLEVVHSSGDYERLTQGVYENYLQ-QKMPDPNFTGVCEALKWFCFTDTVQHQISRQQNYSVYPYLQYGFVAWHLLFATLAW--PKIAFP---TRGFEFQQKSTNQRNIFQALCKGVTTSALGVGQG----GTLLLDTVPLLKRILSP-QLRSVAVQLLSPKEQQDLRHTIEVMVDLGLTFVQVKSQEGHYVFQTEPDLDALSAF--PGYTGLSLPYFSRQLIAREVDLERIRRAAPKGGAPSAPAAKKKTSGAAAQLPNHLQTLKPKPISASNMHSAPKQQLTKDF-FGRITHKSTSTNSAEESKTDAIVKSPIWYRYKEGFNNAVRKDVHIHEL 992
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Fly
Match: Gnf1 (gene:FBgn0004913 transcript:FBtr0078837) HSP 1 Score: 98.9821 bits (245), Expect = 9.110e-21 Identity = 80/307 (26.06%), Postives = 132/307 (43.00%), Query Frame = 3 Query: 495 WVTKYAPRKYVDLLSSESANR---SLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEAL--NDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFT 1400 WV K+ P +++ A L++WL W Y + GNK N D K LLSGPPG+GKTT A +V + +G+ VE NASD RS + K+ + L N + G G + + + LI+DE+DG +A N+ + + + S + PIIC+CND +R L CY ++ P Q+ ++ I E ++ + +I +N DIR +N + + K+ + S + KD+ +G +++ + +FT Sbjct: 423 WVDKHKPTSIKEIVGQAGAASNVTKLMNWLSKW----------------YVNHDGNKKPQRPNPWAKN--DDGSFYKAALLSGPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLSNKSLSGYFTGQG-QAVSRKHVLIMDEVDG-------------MAGNEDRGGMQELIALIKDSSI----PIICMCNDRNHPKIRSLVNYCYDLRFQRPRLEQIKGKIMSICFKEKVKISPAKVEEIIAATNNDIRQSINHIALLSAKE-----DASQKSGQQVATKDLKLGPWEVVRKVFT 688
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Fly
Match: Gnf1 (gene:FBgn0004913 transcript:FBtr0100159) HSP 1 Score: 94.3597 bits (233), Expect = 2.046e-19 Identity = 65/231 (28.14%), Postives = 110/231 (47.62%), Query Frame = 3 Query: 714 KVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEAL--NDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFT 1400 K LLSGPPG+GKTT A +V + +G+ VE NASD RS + K+ + L N + G G + + + LI+DE+DG +A N+ + + + S + PIIC+CND +R L CY ++ P Q+ ++ I E ++ + +I +N DIR +N + + K+ + S + KD+ +G +++ + +FT Sbjct: 503 KAALLSGPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLSNKSLSGYFTGQG-QAVSRKHVLIMDEVDG-------------MAGNEDRGGMQELIALIKDSSI----PIICMCNDRNHPKIRSLVNYCYDLRFQRPRLEQIKGKIMSICFKEKVKISPAKVEEIIAATNNDIRQSINHIALLSAKE-----DASQKSGQQVATKDLKLGPWEVVRKVFT 710
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Fly
Match: RfC3 (gene:FBgn0032244 transcript:FBtr0080019) HSP 1 Score: 53.5286 bits (127), Expect = 3.624e-7 Identity = 67/281 (23.84%), Postives = 109/281 (38.79%), Query Frame = 3 Query: 462 SENISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYP-------VEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQ 1283 SE + + WV KY P DL+S E + + T+F + Q+P +L GPPG GKT+ AR + Y P +E+NASDDR + + +I T+ I D+ +ILDE D +N +N+ + + +K N ICN L ++ + L+ C + P +Q+M RL +I + E ++ + R ++ ++ D+R LN LQ Sbjct: 2 SETSGPAVRMPWVEKYRPSGLDDLISHE---------------EIISTITRFISR-----------------------KQLPH---LLFYGPPGTGKTSTILACARQL-YSPQQFKSMVLELNASDDRGIGIVRGQILNFASTR-TIFCDTFK-------LIILDEADAM--------------TNDAQNALRRIIEKYTD-----NVRFCVICNYL-SKIIPALQSRCTRFRFAPLSQDQMMPRLEKIIEAEAVQITEDGKRALLTLAKGDMRKVLNVLQ 212
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Fly
Match: RfC4 (gene:FBgn0260985 transcript:FBtr0073264) HSP 1 Score: 53.5286 bits (127), Expect = 4.543e-7 Identity = 45/193 (23.32%), Postives = 89/193 (46.11%), Query Frame = 3 Query: 720 VLLSGPPGLGKTTLAQIVAR-----SVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQ 1283 ++++GPPG+GKTT Q +AR S +E+NAS++R +V +N+I+ Q ++ G ++ +ILDE D + TE + + + + E + C ++ + + ++ C +++ Q++ +L E+ K E L + + L ++ + D+R LN LQ Sbjct: 52 IIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERGIDVVRNKIKMF--AQQKVTLPRGRHKI-----VILDEAD-----------------SMTEGAQQALRRTMEIYSSTTRFALACNTSE---KIIEPIQSRCAMLRFTKLSDAQVLAKLIEVAKWEKLNYTEDGLEAIVFTAQGDMRQGLNNLQ 217
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Zebrafish
Match: chtf18 (CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-508]) HSP 1 Score: 347.821 bits (891), Expect = 2.363e-105 Identity = 261/799 (32.67%), Postives = 412/799 (51.56%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYVKVNNEIND------FSNSTMNVSF----------KVASQSFYSILDEAN---ELFK----------KRERKSIQHSENISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTK-----------FTDKLIYN----FNTGNKGTNFEEVLQINPKDQM--PVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLK--INRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLAT---TGKNS---NELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSR--QEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKKXXXXXXXXXXXXXXRIGFIMQKAEEYKNKSTINCVAKYK-------DAYNFRLGPKK----GNSTKDENLNPVL----SILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 P+ D + VT S G+R Y+ ++ F NS + ++A + +++E+ EL K ++ + +S LWV +++P+ Y DLLS + NR LL WLK WD VF R K FT+ N F T ++ T EE+L+ DQ P KV LLSGPPGLGKTTLA I+A+ GY VEINASDDRS E+F+ RI+ TQ+ S NE KP CLI+DEIDG AA+NIL+ + + + V K+K + + RPIICICNDLY +LR LR +++ ++L +RL+EI + + ++ D L + + ++ DIRSC+NTLQF+ H + VS++ +G KD + G+F +WQ+IF P LKR + +G + E A R ++IL L S G+ +K+ G+++N+LS+ + KD + G+ DW+ F+D+ N + Q + + RY + + FH +A+T++ I YP S A+ K + I ++ + I IQSR + L + L+ + +LRP+N QLYS++EK L + ++ MI+ L Y QDR E QY YVL PNIE++ + +++LTY KQLIA E ER++R + + ++ + +N+ + + + ++ + N V + D + + PK+ +++D ++ VL ++ N VWF+F EG NA+RR V +++L Sbjct: 175 PAIGDYITVTDSMGNRVYLNKKEDVEKTPDPRAFRNSLNGLGLLAVPIEVLKEQIAERRHRQVVEESQRLTELMKSGIDSDLLAEEQTDSGVDGDSGEDEASSRLWVDQFSPQHYTDLLSDDFTNRCLLKWLKLWDTVVFGRERKSRPVPVEARSNFTNAQNQNQAQRFKTKSQMT--EEILEAE-LDQYKRPKFKVALLSGPPGLGKTTLAHIIAKHAGYNVVEINASDDRSAELFQKRIDTA--TQMK-SVLGANE---KPNCLIIDEIDGAPAAAINILLATLNRKDSKDGEETGVNALKKKKKKQSVLLRPIICICNDLYVPALRPLRQQAFLLVFPQTLPSRLAQRLAEISRRQGMKADTGTLMALCEKTDNDIRSCINTLQFL-HSRGQKHLDQRSVSSMCVGLKDQNKGLFSVWQEIFQLPRLKRKRIGGDPFSGYDELGPKEGAQRLQHILHLVSSTGEHEKLTQGLYDNFLSM-KLKDPGMLGVCSGLDWLCFSDLLNECVLHGQNYSLMRYFPFLPAAFHQLYAATSV--PRINYPHSHYEAF---TKTQHIRNALLAMLNDIPPAIQSRVCMSSLCLDILSLLLELISPKLRPVNPQLYSTREKQQLYDLIDTMINYNLTYRQDRTPEGQYTYVLEPNIEDVVNYP-GLPPRRQLTYQVKQLIARETELERMRRVERAQQSRNPQKMETVNKNQEEKKTEVKKQTSRNHQQRLENIVKQTVVETRPELDFFGRAIVPKEKPVVTATSEDGKVSGVLNIGKAVGNSDVWFRFNEGVSNAVRRNVYIREL 956
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Zebrafish
Match: chtf18 (CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-508]) HSP 1 Score: 347.051 bits (889), Expect = 5.334e-105 Identity = 263/803 (32.75%), Postives = 415/803 (51.68%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYVKVNNEINDFSNSTMNVSFKVASQSFYSILDEANELFK-----KRERKSIQHSENISA----------------------------SSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTK-----------FTDKLIYN----FNTGNKGTNFEEVLQINPKDQM--PVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLK--INRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLAT---TGKNS---NELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSR--QEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKKXXXXXXXXXXXXXXRIGFIMQKAEEYKNKSTINCVAKYK-------DAYNFRLGPKK----GNSTKDENLNPVL----SILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 P+ D + VT S G+R Y+ N+ D + +F+ S + +L E+ K +R R+ ++ S+ ++ +S LWV +++P+ Y DLLS + NR LL WLK WD VF R K FT+ N F T ++ T EE+L+ DQ P KV LLSGPPGLGKTTLA I+A+ GY VEINASDDRS E+F+ RI+ TQ+ S NE KP CLI+DEIDG AA+NIL+ + + + V K+K + + RPIICICNDLY +LR LR +++ ++L +RL+EI + + ++ D L + + ++ DIRSC+NTLQF+ H + VS++ +G KD + G+F +WQ+IF P LKR + +G + E A R ++IL L S G+ +K+ G+++N+LS+ + KD + G+ DW+ F+D+ N + Q + + RY + + FH +A+T++ I YP S A+ K + I ++ + I IQSR + L + L+ + +LRP+N QLYS++EK L + ++ MI+ L Y QDR E QY YVL PNIE++ + +++LTY KQLIA E ER++R + + ++ + +N+ + + + ++ + N V + D + + PK+ +++D ++ VL ++ N VWF+F EG NA+RR V +++L Sbjct: 175 PAIGDYITVTDSMGNRVYL---NKKEDEEKAPDQRAFR-NSLNGLGLLAVPIEVLKEQIAERRHRQVVEESQRLTELMKSGIDSDLLAEEQTDSGVDGDSGEDEASSRLWVDQFSPQHYTDLLSDDFTNRCLLKWLKLWDTVVFGRERKSRPVPVEARSNFTNAQNQNQAQRFKTKSQMT--EEILEAE-LDQYKRPKFKVALLSGPPGLGKTTLAHIIAKHAGYNVVEINASDDRSAELFQKRIDTA--TQMK-SVLGANE---KPNCLIIDEIDGAPAAAINILLATLNRKDSKDGEETGVNALKKKKKKQSVLLRPIICICNDLYVPALRPLRQQAFLLVFPQTLPSRLAQRLAEISRRQGMKADTGTLMALCEKTDNDIRSCINTLQFL-HSRGQKHLDQRSVSSMCVGLKDQNKGLFSVWQEIFQLPRLKRKRIGGDPFSGYDELGPKEGAQRLQHILHLVSSTGEHEKLTQGLYDNFLSM-KLKDPGMLGVCSGLDWLCFSDLLNECVLHGQNYSLMRYFPFLPAAFHQLYAATSV--PRINYPHSHYEAF---TKTQHIRNALLAMLNDIPPAIQSRVCMSSLCLDILSLLLELISPKLRPVNPQLYSTREKQQLYDLIDTMINYNLTYRQDRTPEGQYTYVLEPNIEDVVNYP-GLPPRRQLTYQVKQLIARETELERMRRVERAQQSRNPQKMETVNKNQEEKKTEVKKQTSRNHQQRLENIVKQTVVETRPELDFFGRAIVPKEKPVVTATSEDGKVSGVLNIGKAVGNSDVWFRFNEGVSNAVRRNVYIREL 956
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Zebrafish
Match: rfc1 (replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]) HSP 1 Score: 129.798 bits (325), Expect = 3.009e-30 Identity = 102/322 (31.68%), Postives = 147/322 (45.65%), Query Frame = 3 Query: 453 IQHSENISASSKTLWVTKYAPRKYVDLLSSES----ANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRI-EALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENS-TKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFT 1400 + HS + S LWV KY PR +L+ + AN+ LL WL+SW KH + N K F + + G+ F K LLSGPPG+GKTT A +V +GY VE+NAS RS K I E+LN+T + ++ + LI+DE+DG +A N+ + +G K+ KI PIIC+CND Q +R L CY ++ P Q+ + I E L+ L VI SN+DIR L+ L KD ++ N +KD+ +G F + + +F Sbjct: 564 VSHSAPENDGSSLLWVDKYRPRSLKNLIGQQGDQSCANK-LLRWLQSWHKH-HSGNAKAPAPKFGKFGSKDDGSGF---------------KAALLSGPPGVGKTTTAALVCEELGYSYVEMNASCTRSKNSLKEVIAESLNNTSIKNFYTGASQTVSSKHVLIMDEVDG-------------MAGNEDRGGIQEMIGLIKQS---KI--PIICMCNDRNHQKIRSLANYCYDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPALNEVILASNQDIRQVLHNLSMWSAKD-KVMTYDQAKADANNAKKDMKLGPFDVCRKVFA 849
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Zebrafish
Match: rfc2 (replication factor C (activator 1) 2 [Source:ZFIN;Acc:ZDB-GENE-050306-29]) HSP 1 Score: 57.3806 bits (137), Expect = 3.542e-8 Identity = 55/194 (28.35%), Postives = 85/194 (43.81%), Query Frame = 3 Query: 720 VLLSGPPGLGKTTLAQIVARSVGYYP------VEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQ 1283 ++++GPPG GKTT +AR++ P +E+NAS+DR +V +N+I+ Q ++ G ++ +ILDE D A L + +KT KI PI C L LR Q+M RL+E+ + ENL ++ L +I + D+R LN LQ Sbjct: 102 IIIAGPPGTGKTTSILCLARAL-LGPAMKDAVLELNASNDRGIDVVRNKIKMF--AQQKVTLPKGRHKI-----IILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASD-----KIIEPIQSRCAVLRYSKLRD---------------EQIMMRLTEVVEKENLHVTNDGLEAIIFTAQGDMRQALNNLQ 267
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Zebrafish
Match: chtf18 (CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-508]) HSP 1 Score: 56.6102 bits (135), Expect = 5.507e-8 Identity = 39/145 (26.90%), Postives = 62/145 (42.76%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYVKVNNEIND------FSNSTMNVSF----------KVASQSFYSILDEAN---ELFK----------KRERKSIQHSENISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTK 614 P+ D + VT S G+R Y+ ++ F NS + ++A + +++E+ EL K ++ + +S LWV +++P+ Y DLLS + NR LL WLK WD VF R K Sbjct: 175 PAIGDYITVTDSMGNRVYLNKKEDVEKTPDPRAFRNSLNGLGLLAVPIEVLKEQIAERRHRQVVEESQRLTELMKSGIDSDLLAEEQTDSGVDGDSGEDEASSRLWVDQFSPQHYTDLLSDDFTNRCLLKWLKLWDTVVFGRERK 319
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Xenopus
Match: CHTF18 (chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:100380057]) HSP 1 Score: 357.451 bits (916), Expect = 2.491e-109 Identity = 264/786 (33.59%), Postives = 403/786 (51.27%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYVKVNNEINDFSNSTMNVSFKVASQSFYSILDEANELFKKRERKSIQHSENISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRN-------------TKFTDKLIYNFNTGNKGTNFEEVLQIN-PKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAI--LASNKTENSTK-TVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKR--------------------SYLATTGKNS-NELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSR---QEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADIN----------RYKKXXXXXXXXXXXXXXRIGFIMQKAEEYKNKSTINCVAKYKDAYNFRL-----GPKKGNSTKDENLNPVL--SILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 P D +NVT + G R Y+ + E ND S + + +E + + + EN S SS +LWV + PR Y +LLS + NR LL WLK WD VF + F ++ +K EE+L+ + P KV LL GPPGLGKTTLA ++AR GY VE+NASDDRSPE+FK RIEA + + D +P CLI+DEIDG ++N+L++ I + +TE T T GKKK+K + RPIICICND Y SLR LR +++ ++L++RL EI + ++ D L + + + DIRSC+NTLQF+ + + + V + IG KD + G+F +WQ+IF P ++R L GK + +A R +IL L+ S G+ +K+ G+++N+L++ + K+ + A DW+ F D+ N I Q F++ RY + FHL FA++ + I YP S A +M+++ ++ V IS I++R Q +V L L+++I P +LRP+NTQL+S+KEK L +N M++ L Y Q+R E QY Y L+PN+E++ +F + +K LTY KQLIA EI ER++R + N K + + + R+ IM+KA ++ K KD + ++ P GN+ ++E++ + ++ N VWF+F EG NA+RR + +KDL Sbjct: 144 PVLEDYINVTSTDGSRVYMTLK-EDNDGSGT-----------------QDDSETLENGDNAGEEDGENES-SSHSLWVDCFTPRHYTELLSDDYTNRCLLKWLKLWDTVVFGKERVVKKPKANVDPRANFKNQKEQQSKFKSKAQITEEILEAELDQHNRPKNKVALLCGPPGLGKTTLAHVIARHAGYNVVEMNASDDRSPEIFKTRIEAATQMKSVLGVDE------RPNCLIIDEIDGAPTVSINMLLSLINRKDAKETEGGTDVTTGKKKKKEGGLLLRPIICICNDQYVPSLRLLRQQAFMLNFPQTLPSRLVQRLYEITIKQGMKADTGALMALCEKTENDIRSCINTLQFLHGRGKKELNMRS-VQTMKIGLKDQNKGLFSVWQEIFQLPKIQRKRIGQEIAIKDLHLFLGSGNESLGGVGKAPLSAVAQRFHHILHLSTSTGEYEKLTMGLYDNFLNM-KVKESNFSTVCLALDWLEFTDIVNTTIMHGQNFQLMRYLPFLPVAFHLLFAASNV--PRIAYPNSHYEAQSKLNQMQNLLNAMV---AEISPAIRTRVGPQSLVLDALCLLLDVISP-KLRPVNTQLFSTKEKQQLAELINTMLAYNLTYHQERTMEGQYVYKLDPNVEDVCRFP-DLPIRKPLTYQAKQLIAREIELERMRRTEDNASANAAKPTTETKGAKSTAKPAALNHEQRLENIMKKAAAFEEKPE-------KDFFGRQIVKKVAAPVAGNANQEESVERRIGKAVGNSDVWFRFNEGVSNAVRRNIYIKDL 888
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Xenopus
Match: CHTF18 (chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:100380057]) HSP 1 Score: 345.125 bits (884), Expect = 2.320e-106 Identity = 241/710 (33.94%), Postives = 374/710 (52.68%), Query Frame = 3 Query: 405 ILDEANELFKKRERKSIQHSENIS-------ASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRN-------------TKFTDKLIYNFNTGNKGTNFEEVLQIN-PKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAI--LASNKTENSTK-TVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLATTGKNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSR---QEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKKXXXXXXXXXXXXXXRIGFI-MQKAEEYKNKSTINCVAKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 + + N+ F + + +++++ +N +SS +LWV + PR Y +LLS + NR LL WLK WD VF + F ++ +K EE+L+ + P KV LL GPPGLGKTTLA ++AR GY VE+NASDDRSPE+FK RIEA + + D +P CLI+DEIDG ++N+L++ I + +TE T T GKKK+K + RPIICICND Y SLR LR +++ ++L++RL EI + ++ D L + + + DIRSC+NTLQF+ + + + V + IG KD + G+F +WQ+IF P ++ + +A R +IL L+ S G+ +K+ G+++N+L++ + K+ + A DW+ F D+ N I Q F++ RY + FHL FA++ + I YP S A +M+++ ++ V IS I++R Q +V L L+++I P +LRP+NTQL+S+KEK L +N M++ L Y Q+R E QY Y L+PN+E++ +F + +K LTY KQLIA EI ER++R + + + S + + + Y K + V + F LG N + ++ N VWF+F EG NA+RR + +KDL Sbjct: 58 LFSQINDEFGEDDSETLENGDNAGEEDGENESSSHSLWVDCFTPRHYTELLSDDYTNRCLLKWLKLWDTVVFGKERVVKKPKANVDPRANFKNQKEQQSKFKSKAQITEEILEAELDQHNRPKNKVALLCGPPGLGKTTLAHVIARHAGYNVVEMNASDDRSPEIFKTRIEAATQMKSVLGVDE------RPNCLIIDEIDGAPTVSINMLLSLINRKDAKETEGGTDVTTGKKKKKEGGLLLRPIICICNDQYVPSLRLLRQQAFMLNFPQTLPSRLVQRLYEITIKQGMKADTGALMALCEKTENDIRSCINTLQFLHGRGKKELNMRS-VQTMKIGLKDQNKGLFSVWQEIFQLPKIQSA-----------VAQRFHHILHLSTSTGEYEKLTMGLYDNFLNM-KVKESNFSTVCLALDWLEFTDIVNTTIMHGQNFQLMRYLPFLPVAFHLLFAASNV--PRIAYPNSHYEAQSKLNQMQNLLNAMV---AEISPAIRTRVGPQSLVLDALCLLLDVISP-KLRPVNTQLFSTKEKQQLAELINTMLAYNLTYHQERTMEGQYVYKLDPNVEDVCRFP-DLPIRKPLTYQAKQLIAREIELERMRRTEAFHANAAKPTTETKGAKSTAKPAALNHEHPRLYVTKIYVVSV------FVFPLGSASANQEESVERRIGKAVGNSDVWFRFNEGVSNAVRRNIYIKDL 735
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Xenopus
Match: CHTF18 (chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:100380057]) HSP 1 Score: 347.051 bits (889), Expect = 3.742e-105 Identity = 263/823 (31.96%), Postives = 400/823 (48.60%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYVKVNNEINDFSNSTMNVSFKVASQS---------------------FYSILDEANELFKKRERKSIQHSENIS--ASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRN-------------TKFTDKLIYNFNTGNKGTNFEEVLQIN-PKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAI--LASNKTENSTK-TVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKR--------------------SYLATTGKNS-NELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSR---QEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRAD----------------------INRYKKXXXXXXXXXXXXXXRIGFIMQKAEEYKNKSTIN---------CVAKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 P D +NVT + G R Y+ + + + NV + Q FY IL +++++ E E+ +SS +LWV + PR Y +LLS + NR LL WLK WD VF + F ++ +K EE+L+ + P KV LL GPPGLGKTTLA ++AR GY VE+NASDDRSPE+FK RIEA + + D +P CLI+DEIDG ++N+L++ I + +TE T T GKKK+K + RPIICICND Y SLR LR +++ ++L++RL EI + ++ D L + + + DIRSC+NTLQF+ + + + V + IG KD + G+F +WQ+IF P ++R L GK + +A R +IL L+ S G+ +K+ G+++N+L++ + K+ + A DW+ F D+ N I Q F++ RY + FHL FA++ + I YP S A +M+++ ++ V IS I++R Q +V L L+++I P +LRP+NTQL+S+KEK L +N M++ L Y Q+R E QY Y L+PN+E++ +F + +K LTY KQLIA EI ER++R + K + + + R+ IM+KA ++ K + A +++ R+G GNS VWF+F EG NA+RR + +KDL Sbjct: 140 PVLEDYINVTSTDGSRVYMTLKEDNDGSGTQQGNVKWNSGQQLHLLGVPFSYLKEQVNDEVMSLFYYILSCTSKIYETLENGDNAGEEDGENESSSHSLWVDCFTPRHYTELLSDDYTNRCLLKWLKLWDTVVFGKERVVKKPKANVDPRANFKNQKEQQSKFKSKAQITEEILEAELDQHNRPKNKVALLCGPPGLGKTTLAHVIARHAGYNVVEMNASDDRSPEIFKTRIEAATQMKSVLGVDE------RPNCLIIDEIDGAPTVSINMLLSLINRKDAKETEGGTDVTTGKKKKKEGGLLLRPIICICNDQYVPSLRLLRQQAFMLNFPQTLPSRLVQRLYEITIKQGMKADTGALMALCEKTENDIRSCINTLQFLHGRGKKELNMRS-VQTMKIGLKDQNKGLFSVWQEIFQLPKIQRKRIGQEIAIKDLHLFLGSGNESLGGVGKAPLSAVAQRFHHILHLSTSTGEYEKLTMGLYDNFLNM-KVKESNFSTVCLALDWLEFTDIVNTTIMHGQNFQLMRYLPFLPVAFHLLFAASNV--PRIAYPNSHYEAQSKLNQMQNLLNAMV---AEISPAIRTRVGPQSLVLDALCLLLDVISP-KLRPVNTQLFSTKEKQQLAELINTMLAYNLTYHQERTMEGQYVYKLDPNVEDVCRFP-DLPIRKPLTYQAKQLIAREIELERMRRTEAFQQARNAGRVSDNASANAAKPTTETKGAKSTAKPAALNHEQRLENIMKKAAAFEEKPEKDFFGRQIVKKVAAPVEESVERRIGKAVGNSD---------------VWFRFNEGVSNAVRRNIYIKDL 932
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Xenopus
Match: CHTF18 (chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:100380057]) HSP 1 Score: 347.051 bits (889), Expect = 1.502e-104 Identity = 270/837 (32.26%), Postives = 419/837 (50.06%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYVKVNNEINDFSNST----------------MNVSF-----KVASQSFYSILDEANEL-----------FKKRERKSIQHSENIS-------ASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRN-----TKFTDKLIYNF-NTGNKGTNFEEVLQINPK------DQM--PVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQ--LGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAI--LASNKTENSTK-TVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKR--------------------SYLATTGKNS-NELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSR---QEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRAD--------------------INRYKKXXXXXXXXXXXXXXRIGFIMQKAEEYKNKSTINCVAKYKDAYNFRL-----GPKKGNSTKDENLNPVL--SILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 P D +NVT + G R Y+ + E ND S + + V F +V + +L+E+ +L F + + +++++ +N +SS +LWV + PR Y +LLS + NR LL WLK WD VF + K NF N + + F+ QI + DQ P KV LL GPPGLGKTTLA ++AR GY VE+NASDDRSPE+FK RIEA + LG+ +P CLI+DEIDG ++N+L++ I + +TE T T GKKK+K + RPIICICND Y SLR LR +++ ++L++RL EI + ++ D L + + + DIRSC+NTLQF+ + + + V + IG KD + G+F +WQ+IF P ++R L GK + +A R +IL L+ S G+ +K+ G+++N+L++ + K+ + A DW+ F D+ N I Q F++ RY + FHL FA++ + I YP S A +M+++ ++ V IS I++R Q +V L L+++I P +LRP+NTQL+S+KEK L +N M++ L Y Q+R E QY Y L+PN+E++ +F + +K LTY KQLIA EI ER++R + K + + + R+ IM+KA ++ K KD + ++ P ++ ++E++ + ++ N VWF+F EG NA+RR + +KDL Sbjct: 190 PVLEDYINVTSTDGSRVYMTLK-EDNDGSGTQQKQGNVKWNSGQQLHLLGVPFSYLKEQVNDERRRQVLEESQKLTEMLNSQINDEFGEDDSETLENGDNAGEEDGENESSSHSLWVDCFTPRHYTELLSDDYTNRCLLKWLKLWDTVVFGKERVVKKPKANVDPRANFKNQKEQQSKFKSKAQITEEILEAELDQHNRPKNKVALLCGPPGLGKTTLAHVIARHAGYNVVEMNASDDRSPEIFKTRIEAATQMKSVLGVDE--------RPNCLIIDEIDGAPTVSINMLLSLINRKDAKETEGGTDVTTGKKKKKEGGLLLRPIICICNDQYVPSLRLLRQQAFMLNFPQTLPSRLVQRLYEITIKQGMKADTGALMALCEKTENDIRSCINTLQFLHGRGKKELNMRS-VQTMKIGLKDQNKGLFSVWQEIFQLPKIQRKRIGQEIAIKDLHLFLGSGNESLGGVGKAPLSAVAQRFHHILHLSTSTGEYEKLTMGLYDNFLNM-KVKESNFSTVCLALDWLEFTDIVNTTIMHGQNFQLMRYLPFLPVAFHLLFAASNV--PRIAYPNSHYEAQSKLNQMQNLLNAMV---AEISPAIRTRVGPQSLVLDALCLLLDVISP-KLRPVNTQLFSTKEKQQLAELINTMLAYNLTYHQERTMEGQYVYKLDPNVEDVCRFP-DLPIRKPLTYQAKQLIAREIELERMRRTEAFQQARNAGRDNASANAAKPTTETKGAKSTAKPAALNHEQRLENIMKKAAAFEEKPE-------KDFFGRQIVKKVAAPVAASANQEESVERRIGKAVGNSDVWFRFNEGVSNAVRRNIYIKDL 1001
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Xenopus
Match: CHTF18 (chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:100380057]) HSP 1 Score: 307.76 bits (787), Expect = 1.734e-90 Identity = 255/817 (31.21%), Postives = 397/817 (48.59%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYVKVNNEINDFSNST----------------MNVSF-----KVASQSFYSILDEANEL-----------FKKRERKSIQHSENIS-------ASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRN-----TKFTDKLIYNF-NTGNKGTNFEEVLQINPK------DQM--PVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQ--LGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAI--LASNKTENSTK-TVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKR--------------------SYLATTGKNS-NELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSR---QEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKKXXXXXXXXXXXXXXRIGFIMQKAEEYKNKSTINCVAKYKDAYNFRL-----GPKKGNSTKDENLNPVL--SILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 P D +NVT + G R Y+ + E ND S + + V F +V + +L+E+ +L F + + +++++ +N +SS +LWV + PR Y +LLS + NR LL WLK WD VF + K NF N + + F+ QI + DQ P KV LL GPPGLGKTTLA ++AR GY VE+NASDDRSPE+FK RIEA + LG+ +P CLI+DEIDG ++N+L++ I + +TE T T GKKK+K + RPIICICND Y SLR LR +++ ++L++RL EI + ++ D L + + + DIRSC+NTLQF+ + + + V + IG KD + G+F +WQ+IF P ++R L GK + +A R +IL L+ S G+ +K+ G+++N+L++ + K+ + A DW+ F D+ N I Q F++ RY + FHL FA++ + I YP S A +M+++ ++ V IS I++R Q +V L L+++I P +LRP+NTQL+S+KEK L +N M++ L Y Q+R E QY N + + K T + + K A +N + R+ IM+KA ++ K KD + ++ P ++ ++E++ + ++ N VWF+F EG NA+RR + +KDL Sbjct: 190 PVLEDYINVTSTDGSRVYMTLK-EDNDGSGTQQKQGNVKWNSGQQLHLLGVPFSYLKEQVNDERRRQVLEESQKLTEMLNSQINDEFGEDDSETLENGDNAGEEDGENESSSHSLWVDCFTPRHYTELLSDDYTNRCLLKWLKLWDTVVFGKERVVKKPKANVDPRANFKNQKEQQSKFKSKAQITEEILEAELDQHNRPKNKVALLCGPPGLGKTTLAHVIARHAGYNVVEMNASDDRSPEIFKTRIEAATQMKSVLGVDE--------RPNCLIIDEIDGAPTVSINMLLSLINRKDAKETEGGTDVTTGKKKKKEGGLLLRPIICICNDQYVPSLRLLRQQAFMLNFPQTLPSRLVQRLYEITIKQGMKADTGALMALCEKTENDIRSCINTLQFLHGRGKKELNMRS-VQTMKIGLKDQNKGLFSVWQEIFQLPKIQRKRIGQEIAIKDLHLFLGSGNESLGGVGKAPLSAVAQRFHHILHLSTSTGEYEKLTMGLYDNFLNM-KVKESNFSTVCLALDWLEFTDIVNTTIMHGQNFQLMRYLPFLPVAFHLLFAASNV--PRIAYPNSHYEAQSKLNQMQNLLNAMV---AEISPAIRTRVGPQSLVLDALCLLLDVISP-KLRPVNTQLFSTKEKQQLAELINTMLAYNLTYHQERTMEGQYD-------------NASANAAKPTTETKG-------AKSTAKPAALNHEQ---------------RLENIMKKAAAFEEKPE-------KDFFGRQIVKKVAAPVAASANQEESVERRIGKAVGNSDVWFRFNEGVSNAVRRNIYIKDL 947
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Mouse
Match: Chtf18 (CTF18, chromosome transmission fidelity factor 18 [Source:MGI Symbol;Acc:MGI:2384887]) HSP 1 Score: 322.398 bits (825), Expect = 8.162e-96 Identity = 246/834 (29.50%), Postives = 399/834 (47.84%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYVKVNNEI--NDFSNSTMNVSFKVASQ------SFYSILDEANELFKKRERKSIQHSENIS----------------------------ASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRN--TKFTDKLIYNFNTGNKGTN----------FEEVLQ--INPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQ--LGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLK-----INRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRS-------------YLATTGKNSNELAT-RNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKKXXXXXXXXXXXXXX--------------------RIGFIMQKA-------EEYKNKSTINCV--------AKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 P D +NVT +SG R ++ + ++ N ++V ++ Q F S+ ++ + KR ++ ++ ++ +S + LWV ++AP+ Y +LLS + NR LL WLK WD VF R + + G + T EE+L+ ++P Q P +KV LL GPPGLGKTTLA +VAR GY VE+NASDDRSPE F+ RIEA + LG+ +P CL++DEIDG AA+N+L+ + E + + RPIICICND + SLRQL+ ++ + P ++L++RL EI + D L + + ++ DIR+C+NTLQF+ + + + V ++G KD G+F +WQ++F P +R L+ K S LA+ R +IL + SAG+ +K++ G+ +N+L + R +D L + A DW+ F+D+ + Q+F++ Y + + FH+ FAS+ + I +P+S A + ++ + V+ ++ + Q +V L L++++ P +LRP++TQLYS+ EK L V M++ L Y Q+R + QY Y L PN+EE+ +F ++K LTY KQLIA EI E+++RA+ + +S ++ + + R+ IM +A ++ + I V A KDA +R+G G S VWF+F EG NA+RR + ++DL Sbjct: 168 PILEDYINVTSTSGERAFLVLRADLIGPGVQNPLLDVHWRGCGQLDLLGVPFASLKEQVD---SKRRQQLLEDAQQLSDTLHSLRSEGEEAVLEGPPAEEPAPGQNTAQHCLWVDEFAPQHYTELLSDDFTNRCLLKWLKLWDLVVFGRERPARKPRPGVETTRVGKEATAPGKWKSHEQALEEMLEAELDPS-QRPRQKVALLCGPPGLGKTTLAHVVARHAGYCVVEMNASDDRSPEAFRTRIEAATQMESVLGVGG--------RPNCLVIDEIDGAPTAAINVLLGILNRKGPQEADQGGTAVAAGGRRRRAEGGLLTRPIICICNDQFTPSLRQLKQQALLLHVPPTLPSRLVQRLQEISLQHGMRSDPGALVALCEKTDNDIRACINTLQFLYGRGRREL-SVKAVQTTHVGLKDQRKGLFSVWQEVFQLPRTQRRIVGQDLMLPAHALLLSNGDKGSLTLASQRFYHILRVTTSAGEHEKVVQGLFDNFLRL-RLRDSSLSTVCCALDWLAFDDLLEQAAHRGQSFQLLCYLPFVPAAFHVLFASSHV--PRITFPSSQQEAQTRMSQTRNHIQTLVSGMAPTTRSRATPQALVLDTLCLLLDVLAP-KLRPVSTQLYSAHEKQQLSCLVGTMLAYSLTYHQERTPDGQYLYKLEPNVEEVCRFP-ELPARKPLTYQAKQLIAREIEMEKMRRAEALAWARSGPQVDQGSSGPASLWTDSGEKGTRQPVPRNHEQRLEHIMTRATVQEQPERDFFGRVVIRKVAVPSREVEAPQKDADEWRMGVAVGRSE---------------VWFRFNEGVSNAVRRSLYIRDL 968
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Mouse
Match: Chtf18 (CTF18, chromosome transmission fidelity factor 18 [Source:MGI Symbol;Acc:MGI:2384887]) HSP 1 Score: 322.398 bits (825), Expect = 9.383e-96 Identity = 246/834 (29.50%), Postives = 399/834 (47.84%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYVKVNNEI--NDFSNSTMNVSFKVASQ------SFYSILDEANELFKKRERKSIQHSENIS----------------------------ASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRN--TKFTDKLIYNFNTGNKGTN----------FEEVLQ--INPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQ--LGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLK-----INRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRS-------------YLATTGKNSNELAT-RNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKKXXXXXXXXXXXXXX--------------------RIGFIMQKA-------EEYKNKSTINCV--------AKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 P D +NVT +SG R ++ + ++ N ++V ++ Q F S+ ++ + KR ++ ++ ++ +S + LWV ++AP+ Y +LLS + NR LL WLK WD VF R + + G + T EE+L+ ++P Q P +KV LL GPPGLGKTTLA +VAR GY VE+NASDDRSPE F+ RIEA + LG+ +P CL++DEIDG AA+N+L+ + E + + RPIICICND + SLRQL+ ++ + P ++L++RL EI + D L + + ++ DIR+C+NTLQF+ + + + V ++G KD G+F +WQ++F P +R L+ K S LA+ R +IL + SAG+ +K++ G+ +N+L + R +D L + A DW+ F+D+ + Q+F++ Y + + FH+ FAS+ + I +P+S A + ++ + V+ ++ + Q +V L L++++ P +LRP++TQLYS+ EK L V M++ L Y Q+R + QY Y L PN+EE+ +F ++K LTY KQLIA EI E+++RA+ + +S ++ + + R+ IM +A ++ + I V A KDA +R+G G S VWF+F EG NA+RR + ++DL Sbjct: 169 PILEDYINVTSTSGERAFLVLRADLIGPGVQNPLLDVHWRGCGQLDLLGVPFASLKEQVD---SKRRQQLLEDAQQLSDTLHSLRSEGEEAVLEGPPAEEPAPGQNTAQHCLWVDEFAPQHYTELLSDDFTNRCLLKWLKLWDLVVFGRERPARKPRPGVETTRVGKEATAPGKWKSHEQALEEMLEAELDPS-QRPRQKVALLCGPPGLGKTTLAHVVARHAGYCVVEMNASDDRSPEAFRTRIEAATQMESVLGVGG--------RPNCLVIDEIDGAPTAAINVLLGILNRKGPQEADQGGTAVAAGGRRRRAEGGLLTRPIICICNDQFTPSLRQLKQQALLLHVPPTLPSRLVQRLQEISLQHGMRSDPGALVALCEKTDNDIRACINTLQFLYGRGRREL-SVKAVQTTHVGLKDQRKGLFSVWQEVFQLPRTQRRIVGQDLMLPAHALLLSNGDKGSLTLASQRFYHILRVTTSAGEHEKVVQGLFDNFLRL-RLRDSSLSTVCCALDWLAFDDLLEQAAHRGQSFQLLCYLPFVPAAFHVLFASSHV--PRITFPSSQQEAQTRMSQTRNHIQTLVSGMAPTTRSRATPQALVLDTLCLLLDVLAP-KLRPVSTQLYSAHEKQQLSCLVGTMLAYSLTYHQERTPDGQYLYKLEPNVEEVCRFP-ELPARKPLTYQAKQLIAREIEMEKMRRAEALAWARSGPQVDQGSSGPASLWTDSGEKGTRQPVPRNHEQRLEHIMTRATVQEQPERDFFGRVVIRKVAVPSREVEAPQKDADEWRMGVAVGRSE---------------VWFRFNEGVSNAVRRSLYIRDL 969
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Mouse
Match: Rfc1 (replication factor C (activator 1) 1 [Source:MGI Symbol;Acc:MGI:97891]) HSP 1 Score: 102.834 bits (255), Expect = 9.030e-22 Identity = 85/311 (27.33%), Postives = 136/311 (43.73%), Query Frame = 3 Query: 492 LWVTKYAPRKYVDLLSSE---SANRSLLSWLKSWDKHV--FNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRI-EALNDTQL-GISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKT-VGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFT 1400 LWV KY P +++ + S LL WL++W K ++ KF + + G++F K LLSGPPG+GKTT A +V + +GY VE+NASD RS K + E+LN+T + G + LI+DE+DG +A N+ + +G K KI PIIC+CND +R L C+ ++ P Q+ + I E L+ + +I +N+D+R L+ L + ++ +KD+ +G F + + +F Sbjct: 569 LWVDKYKPASLKNIIGQQGDQSCANKLLRWLRNWHKSSPEEKKHAKFG-----KLASKDDGSSF---------------KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAVVAESLNNTSIKGFYTSGAAPSVSARHALIMDEVDG-------------MAGNEDRGGIQELIGLIKH---TKI--PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIPPPAMNEIILGANQDVRQVLHNLSMWCAQS-KALTYDQAKADSQRAKKDIRLGPFDVTRKVFA 840
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Mouse
Match: Rfc1 (replication factor C (activator 1) 1 [Source:MGI Symbol;Acc:MGI:97891]) HSP 1 Score: 102.449 bits (254), Expect = 9.833e-22 Identity = 85/311 (27.33%), Postives = 136/311 (43.73%), Query Frame = 3 Query: 492 LWVTKYAPRKYVDLLSSE---SANRSLLSWLKSWDKHV--FNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRI-EALNDTQL-GISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKT-VGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFT 1400 LWV KY P +++ + S LL WL++W K ++ KF + + G++F K LLSGPPG+GKTT A +V + +GY VE+NASD RS K + E+LN+T + G + LI+DE+DG +A N+ + +G K KI PIIC+CND +R L C+ ++ P Q+ + I E L+ + +I +N+D+R L+ L + ++ +KD+ +G F + + +F Sbjct: 583 LWVDKYKPASLKNIIGQQGDQSCANKLLRWLRNWHKSSPEEKKHAKFG-----KLASKDDGSSF---------------KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAVVAESLNNTSIKGFYTSGAAPSVSARHALIMDEVDG-------------MAGNEDRGGIQELIGLIKH---TKI--PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIPPPAMNEIILGANQDVRQVLHNLSMWCAQS-KALTYDQAKADSQRAKKDIRLGPFDVTRKVFA 854
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Mouse
Match: Rfc1 (replication factor C (activator 1) 1 [Source:MGI Symbol;Acc:MGI:97891]) HSP 1 Score: 102.449 bits (254), Expect = 1.091e-21 Identity = 84/309 (27.18%), Postives = 134/309 (43.37%), Query Frame = 3 Query: 492 LWVTKYAPRKYVDLLSSE---SANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRI-EALNDTQL-GISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKT-VGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFT 1400 LWV KY P +++ + S LL WL++W H + K + + G++F K LLSGPPG+GKTT A +V + +GY VE+NASD RS K + E+LN+T + G + LI+DE+DG +A N+ + +G K KI PIIC+CND +R L C+ ++ P Q+ + I E L+ + +I +N+D+R L+ L + ++ +KD+ +G F + + +F Sbjct: 569 LWVDKYKPASLKNIIGQQGDQSCANKLLRWLRNW--HKSSPEEKKHAAKFGKLASKDDGSSF---------------KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAVVAESLNNTSIKGFYTSGAAPSVSARHALIMDEVDG-------------MAGNEDRGGIQELIGLIKH---TKI--PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIPPPAMNEIILGANQDVRQVLHNLSMWCAQS-KALTYDQAKADSQRAKKDIRLGPFDVTRKVFA 841
BLAST of Chromosome transmission fidelity factor 18 vs. UniProt/SwissProt
Match: sp|Q6NU40|CTF18_XENLA (Chromosome transmission fidelity protein 18 homolog OS=Xenopus laevis OX=8355 GN=chtf18 PE=2 SV=1) HSP 1 Score: 344.354 bits (882), Expect = 7.262e-103 Identity = 269/843 (31.91%), Postives = 411/843 (48.75%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYVKVNNEINDFSNST--------------MNVSF-----KVASQSFYSILDEA-----------NELFKKRERKSIQHSENIS-------ASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRN------TKFTDKLIYNF-NTGNKGTNFEEVLQINPK--------DQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQ--LGISNDSGNEQLMKPCCLILDEIDGTGVAAVNIL---VNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRS-----------YLATTGKNS----------NELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSR---QEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRY--------------------KKXXXXXXXXXXXXXXRIGFIMQKA--EEYKNK------------STINCVAKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 P D +NVT + G R Y+ + E ND + + V F +V + +L+E+ NE F + + + +++ +N SS +LWV ++ PR Y +LLS + NR LL WLK WD VF + D +F N + + F+ QI + P KV LL GPPGLGKTTLA ++AR GY VE+NASDDRSPE F+ RIEA + LG+ +P CLI+DEIDG ++N+L VN A + T GKKK+K + RPIICICND Y SLRQLR +++ ++L++RL EI + ++ D L + + + DIRSC+NTLQF+ + + + V + IG KD + G+F +WQ+IF P ++R +L +N N +A R +IL L+ S G+ +K+ G+++N+L++ + K+ + A DW+ F D+ N I Q F++ RY + FHL FA++ + I YP+S A +M+++ ++ V+ IS I++R Q +V L L++++ P +LRP+NTQL+S+KEK L +N M++ L Y Q+R E QY Y L+PN+E++ +F + +K LTY TKQLIA EI ER++R + + K + + + R+ IM+KA EE K + + A +++ R+G GNS VWF+F EG NA+RR + +KDL Sbjct: 190 PVLEDYINVTSTDGSRVYMALK-EDNDGAQQKQGNLKWNSGQQLHLLGVPFSYLKEQVNDEHRRKVLEESQRLTEMLNSQINEEFGENDSEILENDDNAGEEDDEDEPSSHSLWVDRFTPRHYTELLSDDYTNRCLLKWLKLWDTVVFGKERVVRKPKAIVDPRANHFKNQKEQQSKFKTKAQITEEILEAELDHHNRPKNKVSLLCGPPGLGKTTLAHVIARHAGYNVVEMNASDDRSPEAFRTRIEAATQMKSVLGVDE--------RPNCLIIDEIDGAPTVSINMLLSLVNRKDAKEAEGGTEATTGKKKKKEGGLLLRPIICICNDQYVPSLRQLRQQAFMLNFPQTMPSRLVQRLYEIAVKQGMKADTGALMALCEKTENDIRSCINTLQFLHGRGKKELNMRS-VQTMRIGLKDQNKGLFSVWQEIFQLPKIQRKRIGQEVATNDLHLLLGSENDSLGMLAKPPLNAVAQRFHHILHLSTSTGEYEKLTMGLYDNFLNM-KVKESNFSTVCLALDWLEFTDIVNSTIMHGQNFQLMRYLPFLPVAFHLLFAASNV--PRIAYPSSHYEAQSKLNQMQNLLNAMVS---EISPAIRTRVGPQSLVLDALCLLLDVLSP-KLRPVNTQLFSTKEKQQLAELINTMLAYNLTYHQERTMEGQYVYKLDPNVEDVCRFP-DLPVRKPLTYQTKQLIAREIELERMRRTEAFQQARNAGRDNTTAAAAVKTADPKGAKSAAKPAALNHEQRLENIMKKATFEEKPEKDFFGRQIVKKVAAPVTASANQEESVERRIGKAVGNSD---------------VWFRFNEGVSNAVRRNIYIKDL 999
BLAST of Chromosome transmission fidelity factor 18 vs. UniProt/SwissProt
Match: sp|Q8WVB6|CTF18_HUMAN (Chromosome transmission fidelity protein 18 homolog OS=Homo sapiens OX=9606 GN=CHTF18 PE=1 SV=1) HSP 1 Score: 334.724 bits (857), Expect = 2.083e-99 Identity = 256/836 (30.62%), Postives = 402/836 (48.09%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYV--KVNNEINDFSNSTMNVSFKVASQ------SFYSI------------LDEANEL------FKKRERKSIQH--------SENISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFN--------RNTKFTDKLIYNFNTGNKGTNFEEVLQ------INPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLK-----------INRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKR------------SYLATTGKNSN--ELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADIN--------------------RYKKXXXXXXXXXXXXXXRIGFIMQKA--EEYKNKSTINCV-------------AKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 P D V+VT + G R Y+ + + S ++V ++ Q S S+ L EA +L + E ++ Q ++ ASS LWV ++APR Y +LLS + NR LL WLK WD VF R + ++ K + E+VL+ ++P Q P +KV LL GPPGLGKTTLA ++AR GY VE+NASDDRSPEVF+ RIEA TQ+ +G KP CL++DEIDG VAA+N+L++ + + VG + P + RPIICICND +A SLRQL+ +++ P ++L++RL E+ + + D +L + + ++ DIR+C+NTLQF+ + + + V +G KD G+F +WQ++F P +R + L G + + R +L A SAG+ +K++ G+ +N+L + R +D L + A DW+ F+D+ + Q+F++ RY + FH+ FAS+ I +P+S A +M+++ + V+ ++ + Q ++ L L++I+ P +LRP++TQLYS++EK L + V M++ L Y Q+R + QY Y L PN+EE+ +F ++K LTY TKQLIA EI E+++RA+ + + R+ IM++A EE K V A +D+ R+G G S VWF+F EG NA+RR + ++DL Sbjct: 172 PILEDYVHVTSTEGVRAYLVLRADPMAPGVQGSLLHVPWRGGGQLDLLGVSLASLKKQVDGERRERLLQEAQKLSDTLHSLRSGEEEAAQPLGAPEEEPTDGQDASSHCLWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHERPSRKPRPSVEPARVSKEATAPGKWKSHEQVLEEMLEAGLDP-SQRPKQKVALLCGPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAA--TQMESVLGAGG----KPNCLVIDEIDGAPVAAINVLLSIL-----NRKGPQEVGPQGPAVPSGGGRRRRAEGGLLMRPIICICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDNDIRACINTLQFLYSRGQRELSVRD-VQATRVGLKDQRRGLFSVWQEVFQLPRAQRRRVGQDPALPADTLLLGDGDAGSLTSASQRFYRVLHAAASAGEHEKVVQGLFDNFLRL-RLRDSSLGAVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHT--PRITFPSSQQEAQNRMSQMRNLIQTLVSGIAPATRSRATPQALLLDALCLLLDILAP-KLRPVSTQLYSTREKQQLASLVGTMLAYSLTYRQERTPDGQYIYRLEPNVEELCRFP-ELPARKPLTYQTKQLIAREIEVEKMRRAEASARVENSPQVDGSPPGLEGLLGGIGEKGVHRPAPRNHEQRLEHIMRRAAREEQPEKDFFGRVVVRSTAVPSAGDTAPEQDSVERRMGTAVGRSE---------------VWFRFNEGVSNAVRRSLYIRDL 974
BLAST of Chromosome transmission fidelity factor 18 vs. UniProt/SwissProt
Match: sp|Q8BIW9|CTF18_MOUSE (Chromosome transmission fidelity protein 18 homolog OS=Mus musculus OX=10090 GN=Chtf18 PE=1 SV=2) HSP 1 Score: 323.553 bits (828), Expect = 2.451e-95 Identity = 246/834 (29.50%), Postives = 401/834 (48.08%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYVKVNNEI--NDFSNSTMNVSFKVASQ------SFYSILDEANELFKKRERKSIQHSENIS----------------------------ASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRN--TKFTDKLIYNFNTGNKGTN----------FEEVLQ--INPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQ--LGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLK-----INRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRS-------------YLATTGKNSNELAT-RNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKKXXXXXXXXXXXXXX--------------------RIGFIMQKA-------EEYKNKSTINCV--------AKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 P D +NVT +SG R ++ + ++ N ++V ++ Q F S+ ++ + KR ++ ++ ++ +S + LWV ++AP+ Y +LLS + NR LL WLK WD VF R + + G + T EE+L+ ++P Q P +KV LL GPPGLGKTTLA +VAR GY VE+NASDDRSPE F+ RIEA + LG+ +P CL++DEIDG AA+N+L+ + E + + RPIICICND + SLRQL+ ++ + P ++L++RL EI + D L + + ++ DIR+C+NTLQF+ + + ++ V ++G KD G+F +WQ++F P +R L+ K S LA+ R +IL + SAG+ +K++ G+ +N+L + R +D L + A DW+ F+D+ + Q+F++ Y + + FH+ FAS+ + I +P+S A + ++ + V+ ++ + Q +V L L++++ P +LRP++TQLYS+ EK L V M++ L Y Q+R + QY Y L PN+EE+ +F ++K LTY KQLIA EI E+++RA+ + +S ++ + + R+ IM++A ++ + I V A KDA +R+G G S VWF+F EG NA+RR + ++DL Sbjct: 168 PILEDYINVTSTSGERAFLVLRADLIGPGVQNPLLDVHWRGCGQLDLLGVPFASLKEQVD---SKRRQQLLEDAQQLSDTLHSLRSEGEEAVLEGPPAEEPAPGQNTAQHCLWVDEFAPQHYTELLSDDFTNRCLLKWLKLWDLVVFGRERPARKPRPGVETTRVGKEATAPGKWKSHEQALEEMLEAELDPS-QRPRQKVALLCGPPGLGKTTLAHVVARHAGYCVVEMNASDDRSPEAFRTRIEAATQMESVLGVGG--------RPNCLVIDEIDGAPTAAINVLLGILNRKGPQEADQGGTAVAAGGRRRRAEGGLLTRPIICICNDQFTPSLRQLKQQALLLHVPPTLPSRLVQRLQEISLQHGMRSDPGALVALCEKTDNDIRACINTLQFLYGRGRRE-LSVKAVQTTHVGLKDQRKGLFSVWQEVFQLPRTQRRIVGQDLMLPAHALLLSNGDKGSLTLASQRFYHILRVTTSAGEHEKVVQGLFDNFLRL-RLRDSSLSTVCCALDWLAFDDLLEQAAHRGQSFQLLCYLPFVPAAFHVLFASSHV--PRITFPSSQQEAQTRMSQTRNHIQTLVSGMAPTTRSRATPQALVLDTLCLLLDVLAP-KLRPVSTQLYSAHEKQQLSCLVGTMLAYSLTYHQERTPDGQYLYKLEPNVEEVCRFP-ELPARKPLTYQAKQLIAREIEMEKMRRAEALAWARSGPQVDQGSSGPASLWTDSGEKGTRQPAPRNHEQRLEHIMKRATVQEQPERDFFGRVVIRKVAVPSREVEAPQKDADEWRMGVAVGRSE---------------VWFRFNEGVSNAVRRSLYIRDL 968
BLAST of Chromosome transmission fidelity factor 18 vs. UniProt/SwissProt
Match: sp|Q9USQ1|CTF18_SCHPO (Chromosome transmission fidelity protein 18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ctf18 PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.717e-57 Identity = 196/727 (26.96%), Postives = 333/727 (45.80%), Query Frame = 3 Query: 333 NEIN-DFSNSTMNVSFKVASQSFYSILDEANELFKKRERKSIQHSE-NISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQ---DIFTEPNLKRS-YLATTGKN------SNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRY---PTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKKXXXXXXXXXXXXXXRIGFIMQKAEEYKNKSTINCVAKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVW------FKFKEGYCNAIRRPVKMKDL 2450 NEI DF+ +N S ++ S++F + E + K + S+Q + S+ LWV Y P+ + DLL E +R+ + W+K+WD VF + ++ FN + TN I P K++++L+G G GKTTLA ++A GY +EINASDDR+ ++ + ISN S +P C+I+DEIDG A V L++ + + K ++ KK+K K+ RPIICICNDLY +LR LRP +I PP L+ RL I + EN+ D L + D+ N DIRSC+N+LQ +++ K +D K+ Q + F+ +L +S +L K S + +LA A D + ++ YL + F D L ++W+ F D + K +E++RY I FH +A+ P R P SD A ++ K I DSF++ + + + ++ ++ ++ I P L+ + S +++ +NI+ L + Q +G+ Y Y L P ++E+ +YS +Q+++ E++++R+ ADI K++ ++ + S+ R F KA + +D + + K + N L+ + PV KF +G+ NA+R+P+ + ++ Sbjct: 298 NEIGKDFNQDLLN-SVRIWSENFLIVSKEKSVALKTEKLDSLQITNCTTKPQSQKLWVDTYRPQLFRDLLGDERVHRAAMHWIKAWDPCVFGK-SRLQPSKSMRFNP--RFTN------ITSDSDRPDKRIMMLTGLAGAGKTTLAHVIAHQAGYKVLEINASDDRTAHTVHEKVSS------AISNHSALSS--QPTCVIVDEIDGGDPAFVRALLSLLESDEKATEYSQAGNSKKKKKFKKLCRPIICICNDLYTPALRPLRPYAQIIYFRPPPQASLVGRLRTICRNENIAVDSRSLTLLTDIYNSDIRSCINSLQL-----------------LSLNNKRIDSETIKLLQPKSNSFSTSSLIQSLFLQLDNKQIRAIEASQPTYSHLDALLARIDGANDSESVLMNCFHTYLDLP-FTDSLLSKPALTSEWLYFFDQLHSQC-YKGNYELWRYIPYSIIHFHYLYAT----PEKCRLPHPPRSDLEALKLYRTRKEILDSFISTLNAYENQMHGERSILLELIRTILITINPT-LKQKEDSMPRSALPSKIEHAINILNHYNLRFQQLPVGDGNYVYRLEPPLDELV------WDAPTSSYSVRQMLSQELLKKRL--ADIK--KQTLTDNPTSSNSSRKRKDFNSGKAIK-------------RDFFGRIISEPKSEAVTSNNA--ALNTGDHPVSIKHAINIKFHDGFSNAVRKPISLNEI 957
BLAST of Chromosome transmission fidelity factor 18 vs. UniProt/SwissProt
Match: sp|P49956|CTF18_YEAST (Chromosome transmission fidelity protein 18 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CTF18 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 4.201e-48 Identity = 186/706 (26.35%), Postives = 327/706 (46.32%), Query Frame = 3 Query: 441 ERKSIQHSENISA--SSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAA-----VNILVNAILASNKT--ENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHK-DPNDFVATNLVS----NINIGQKDVDIGIFKIWQDIF-TEPNLKRSYLATTGKNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMK-------SICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLG--EMQYQYVLNPNIEEISKFN---LNEMSKKELTYSTKQLIANEIIRERIKRADINRYKKXXXXXXXXXXXXXXRIGFIMQKAEEYKNKSTINCVAKYKDAYNFRLGPKKGNSTKDENLNPVLS-------ILNQPV--WFKFKEGYCNAIRRPVKMKDL 2450 +R + Q + I+ S TLWV K+ P+K++DL+ +E NR +L WL+ W VF + T + ++ E ++P + P KK++LL GPPG+GKT++A ++A+ G+ EINASD+R+ + K +I L +N P CL+ DEIDG+ + V+I+ + I A+NK K K+K+K + RPIICICN+LYA SL +L+P C +I + P L+ RL+ I EN+ + ++ID++ D+R+C+N LQF+ D D A++ + KD I FKI +F +P+ ++ + +L G+ D+I+ G N V++ D ++ + +DW+ F+D+ + + E+ RY + F +F A IR N+ + +++K S+ ++ Q + R+ ++ +LPYL ++I + + N +L ++ I++ V ++ S L Q+R +++ ++P I+E+ N +NE+ K + L+A +I R K+ I++ + S Q+ K K+ +N + D + + G K +E + S NQ V W K+ EG+ NA+R+ V +L Sbjct: 96 DRTNAQKTSPITGKIGSDTLWVEKWRPKKFLDLVGNEKTNRRMLGWLRQWTPAVFKEQ-------LPKLPTEKEVSDME----LDPL-KRPPKKILLLHGPPGIGKTSVAHVIAKQSGFSVSEINASDERAGPMVKEKIYNLLFNHTFDTN---------PVCLVADEIDGSIESGFIRILVDIMQSDIKATNKLLYGQPDKKDKKRKKKRSKLLTRPIICICNNLYAPSLEKLKPFCEIIAVKRPSDTTLLERLNLICHKENMNIPIKAINDLIDLAQGDVRNCINNLQFLASNVDSRDSSASDKPACAKNTWASSNKDSPISWFKIVNQLFRKDPH-------------RDIKEQFYELLNQVELNGNSDRILQGCF-NIFPYVKYSDNGIRKPANISDWLFFHDLMYQSMYAHNG-ELLRYSALVPLVFFQTFGDIAN-KDDIRM----KNSEYEQRELKRANSDIVSLIMRHISVQSPLMASFTDRKSLIFEILPYLDSMISSDFNKIRNLKL----KQAIMEELVQLLKSFQLNLIQNRSEGFDVRGGLTIDPPIDEVVLLNPKHINEVQHKRAN-NLSSLLA-KIEENRAKKRHIDQVTEDRLQS---------------QEMHSKKVKTGLNSSSSTIDFFKNQYGLLKQTQELEETQKTIGSDETNQADDCNQTVKIWVKYNEGFSNAVRKNVTWNNL 739
BLAST of Chromosome transmission fidelity factor 18 vs. TrEMBL
Match: A0A0L8GP69 (AAA domain-containing protein OS=Octopus bimaculoides OX=37653 GN=OCBIM_22030257mg PE=4 SV=1) HSP 1 Score: 410.609 bits (1054), Expect = 9.799e-127 Identity = 269/737 (36.50%), Postives = 403/737 (54.68%), Query Frame = 3 Query: 321 VKVNNEINDFSNSTMNVSFKVASQSFYSILDEANELFKKRERKSIQHSE---NISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLI-----YNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRS---------YLATTGKNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTN-QGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADI-------NRYKKXXXXXXXXXXXXXXRIGFIMQKA--EEYKNKSTINCVAKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 +K++ EIN+ ++T S + E+ + R H+E + LWV KYAPR Y +LLS E+ NRSLL WLK WD VFNR K K +FN + E L K P++K+VLL+G PGLGKTTLA ++A+ GY VE+NASDDRS EV K +IE+ I S E +P CLI+DEIDG AA+N+L+ LA E T GKKKEK L RPIICICND+Y SLRQLRP+ + P D ++L RL ++ + E L+ + N L + + ++ DIRSCLNTLQF++ + +F LV++++IGQKDV +F +W D+F P LK+S LAT + + R +NIL +AG+ DKI+ G+ +NYL V+FKD + G+ A DW+ F D N YI+S Q + M +Y+ + FH FAS I YP +T +F + +++ S +++ S+ +++ ++Q ++ L++I++P LRP+N QLYS++EK L+ + M++ + Y Q++ + QY YVL PNIEE+ KF +K+LTY+TKQ+IA EI E+++ AD N + + +R + Q +E+ + + K + A + ++ P K NP++ + +WF+FKEG+ NA+RR VK++D Sbjct: 140 IKISEEINNLDSATEGGSVGSGQTHTDAEGVSGEEMEAQSVRVDDIHNEERPTTGGNEDNLWVDKYAPRSYAELLSEENINRSLLHWLKLWDHVVFNRPIKMNHKKADVKTNVHFNKKKQQQMVSEELD---KQNRPLQKIVLLNGAPGLGKTTLAHVIAKHAGYNVVEMNASDDRSEEVVKTKIES------AILMKSVVESDPRPNCLIIDEIDGAPQAAINVLLQ--LAK---EGQT---GKKKEKGLLL--RPIICICNDMYVPSLRQLRPVALIFTFPPTDSSRLAGRLYQVSRWETLKAEMNALMALCEKTSNDIRSCLNTLQFVQ-RQKQEF-NLRLVNSMHIGQKDVQRSLFSVWYDVFRMPRLKKSKYLTVQDLQTLATNVQPNTTPTARFQNILQSTYAAGEFDKILHGLFQNYLE-VKFKDPKMGGINMALDWLGFVDEINCYIHSNQDYTMMQYRPYLCVVFHFMFASNT--HPKILYPHQNTEMFFKKTRTENLISSLLSDVHPSVRKYLHF-SSIIQEVIHPLMSILQP-ALRPVNMQLYSNREKECLRQLIITMVAYNMTYQQEKSADGQYNYVLEPNIEEVVKFP-GMKQQKQLTYATKQMIAREIAAEKMRMADKSSSVQIRNENSTTMTTTTTTGVIPNHRQKLVPQSVGLKEHTERDFFGRIIK-QSAPSSQVDPTDVVKEK----NPLMKV----IWFRFKEGFSNAVRRQVKVQDF 840
BLAST of Chromosome transmission fidelity factor 18 vs. TrEMBL
Match: A0A0L8GPM4 (AAA domain-containing protein OS=Octopus bimaculoides OX=37653 GN=OCBIM_22030257mg PE=4 SV=1) HSP 1 Score: 410.223 bits (1053), Expect = 1.445e-125 Identity = 269/737 (36.50%), Postives = 403/737 (54.68%), Query Frame = 3 Query: 321 VKVNNEINDFSNSTMNVSFKVASQSFYSILDEANELFKKRERKSIQHSE---NISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLI-----YNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRS---------YLATTGKNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTN-QGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADI-------NRYKKXXXXXXXXXXXXXXRIGFIMQKA--EEYKNKSTINCVAKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 +K++ EIN+ ++T S + E+ + R H+E + LWV KYAPR Y +LLS E+ NRSLL WLK WD VFNR K K +FN + E L K P++K+VLL+G PGLGKTTLA ++A+ GY VE+NASDDRS EV K +IE+ I S E +P CLI+DEIDG AA+N+L+ LA E T GKKKEK L RPIICICND+Y SLRQLRP+ + P D ++L RL ++ + E L+ + N L + + ++ DIRSCLNTLQF++ + +F LV++++IGQKDV +F +W D+F P LK+S LAT + + R +NIL +AG+ DKI+ G+ +NYL V+FKD + G+ A DW+ F D N YI+S Q + M +Y+ + FH FAS I YP +T +F + +++ S +++ S+ +++ ++Q ++ L++I++P LRP+N QLYS++EK L+ + M++ + Y Q++ + QY YVL PNIEE+ KF +K+LTY+TKQ+IA EI E+++ AD N + + +R + Q +E+ + + K + A + ++ P K NP++ + +WF+FKEG+ NA+RR VK++D Sbjct: 248 IKISEEINNLDSATEGGSVGSGQTHTDAEGVSGEEMEAQSVRVDDIHNEERPTTGGNEDNLWVDKYAPRSYAELLSEENINRSLLHWLKLWDHVVFNRPIKMNHKKADVKTNVHFNKKKQQQMVSEELD---KQNRPLQKIVLLNGAPGLGKTTLAHVIAKHAGYNVVEMNASDDRSEEVVKTKIES------AILMKSVVESDPRPNCLIIDEIDGAPQAAINVLLQ--LAK---EGQT---GKKKEKGLLL--RPIICICNDMYVPSLRQLRPVALIFTFPPTDSSRLAGRLYQVSRWETLKAEMNALMALCEKTSNDIRSCLNTLQFVQ-RQKQEF-NLRLVNSMHIGQKDVQRSLFSVWYDVFRMPRLKKSKYLTVQDLQTLATNVQPNTTPTARFQNILQSTYAAGEFDKILHGLFQNYLE-VKFKDPKMGGINMALDWLGFVDEINCYIHSNQDYTMMQYRPYLCVVFHFMFASNT--HPKILYPHQNTEMFFKKTRTENLISSLLSDVHPSVRKYLHF-SSIIQEVIHPLMSILQP-ALRPVNMQLYSNREKECLRQLIITMVAYNMTYQQEKSADGQYNYVLEPNIEEVVKFP-GMKQQKQLTYATKQMIAREIAAEKMRMADKSSSVQIRNENSTTMTTTTTTGVIPNHRQKLVPQSVGLKEHTERDFFGRIIK-QSAPSSQVDPTDVVKEK----NPLMKV----IWFRFKEGFSNAVRRQVKVQDF 948
BLAST of Chromosome transmission fidelity factor 18 vs. TrEMBL
Match: K1PLR8 (Chromosome transmission fidelity protein 18-like protein (Fragment) OS=Crassostrea gigas OX=29159 GN=CGI_10007625 PE=4 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 2.406e-125 Identity = 272/780 (34.87%), Postives = 413/780 (52.95%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYVKVNNEI---NDFSN-STMNVSFKVASQSFYSILDEANELFKKRERKSIQHSENISA-------------------------SSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTN---FEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLATTG--------KNSN-ELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRY---------KKXXXXXXXXXXXXXXRIGF--IMQKAEEYKNKSTINCVAKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 PS D + T S G Y+K+ +EI +F + + ++ S SF ++ ++A +L R+ K + +E ++ + K LWV K+AP+ Y DLLS ES NR+LL WLK WD VF ++ K K + + EV+ K PV+K+VLL+GPPGLGKTTLA I+A+ GY VE+NASDDRS +VFK ++EA + + +D +P CL++DEIDG+ A +NIL+N + S++ KKK+K + RPIICICND Y +LRQLR VI + +L RLSE+ K ++L D N L + + + DIRSC+NTLQF + + V +N+GQKD + +F +W +IF+ P K++ + KN N L +R KN+L A G+ K+I G+ ENYL +FKD ++G+V A DW+ F D+ N I+S Q + + Y I FHL FA+ I+YP +D +A+ QK ++ S +++ + + +VV +LP L+ II+PN LRP+NTQLYS KEK L + MI+ + Y Q++ E QY YVL+PN+EE+++F K+LTY+ KQLI+ EI ER++R + Y KK E ++++ R+ +M + E A +D + + K + +D+ ++LN +WF F EG+ NA+RR V+++D Sbjct: 1 PS-GDFMCTTNSDGEMFYIKLKDEIAMTKEFEDIGKRKKTSQLLSVSFETLREQAEKL---RQEKLMAEAEMLTQEINRDLSERLSEDEDDEAEKAVNHEAEKLLWVEKFAPKTYTDLLSDESINRTLLHWLKLWDYVVFGKDVKLKKKEMSKKGKEKEQKKKKFLPEVIDELDKHNRPVQKIVLLNGPPGLGKTTLAHIIAKHCGYNVVEMNASDDRSADVFKTKLEAATQMKSVLESDP------RPNCLVIDEIDGSPQAVINILLNFVKRSDEPGQ------KKKKKDEGILLRPIICICNDQYVPALRQLRMNALVINFPQTEPARLASRLSEVAKSQSLRTDLNTLLALCNKTENDIRSCINTLQFCFRQKKE--LTMRTVQTMNVGQKDSNKSLFSMWYEIFSLPRQKKNKFISLHDIQGQDWKKNDNLSLESRFKNVLHAAHCTGEYSKLIQGMFENYLE-CKFKDPKMEGLVLANDWLCFTDLLNSQISSTQNYSIMPYIPYITVTFHLLFATNQT--QRIQYPHADQDAFLQRQKSGNLVTSLMSDMLPSVRMFVNETDVVMEILPPLLEIIQPN-LRPVNTQLYSVKEKEDLAQLIRTMIAYNMTYNQEKTPEGQYTYVLDPNMEEVARFT-GMKQHKQLTYAAKQLISREIGLERLRRNETPVYYDNCSSKETKKKLEKNSDVVPNHLQRLEAKPVMSREE-----------AAERDFFGRIIKRKTPEAQRDDKQEKKKNVLNTDIWFHFTEGFSNAVRRNVRVQDF 746
BLAST of Chromosome transmission fidelity factor 18 vs. TrEMBL
Match: A0A3S1A3P3 (AAA domain-containing protein OS=Elysia chlorotica OX=188477 GN=EGW08_002365 PE=4 SV=1) HSP 1 Score: 404.445 bits (1038), Expect = 2.196e-123 Identity = 261/696 (37.50%), Postives = 389/696 (55.89%), Query Frame = 3 Query: 471 ISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNT-KFTDKLIYNFNTG-NKGTNFE------EVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRS-YLA----------TTGKNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKKXXXXXXXXXXXXXXR------IGFIMQKAEEYKNKSTINCVAKYKDAYNFRLG-----PKKGNSTKDENLNPV------LSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 +S K+LWV KYAPR+Y +LLS ES NRSLL WLK WD VF ++ K K NF K TNF+ EV + K P +K+ LL GPPGLGKTTLA IVA+ GY VE+NASDDRS +VF+N++E+ + I D +P CL++DEIDG A+N+L+N I ++ + ST KKKE L RPIIC+CND Y +LRQLR L ++ + ++L RL E+ K+E L+ D N L + + ++ DIRSCLNTLQF+ + N + V +++GQKD +F +W D+FT P K++ +L+ T N+ + R ++IL + ++ G+ D+++ GIHENYL + KD L G+ A DW+ F D N YI Q + + ++ + FH +A A P+ +++P A HQK ++ S +++ ++Q + + +L +++I++P LRP+NTQLYS+KEK L N V IMI+ + Y Q++ + QY Y L+PN+EE+ KF +K+LTY KQ+IA EI E+++RA+ R K SN + + + + + +QK E KN +A K A NF G ++ +KD + +L+ +WF FKEG+ NA+RR VK++DL Sbjct: 275 LSEEMKSLWVEKYAPRRYTELLSEESINRSLLHWLKLWDYVVFGKDVPKPMKKAANNFKKDKEKETNFKNKKFFSEVAEQLDKHHRPEQKIALLCGPPGLGKTTLAHIVAKHAGYNVVEMNASDDRSVDVFRNKLESATQMKAVIGADP------RPNCLVIDEIDGAPAPAINVLLNLIKRTD-MDASTDKKKKKKEGDLLL--RPIICVCNDQYVPALRQLRQLALILNFPQTESSKLASRLHEVVKIERLKADLNALLALCERTDNDIRSCLNTLQFV--RQSNKELTLRDVQTMSVGQKDSQKSLFSLWHDVFTMPRPKKNRFLSIQDLAEGKQDTLQTNNISPSARFQHILYMCQATGETDRVMQGIHENYLE-AKAKDPHLIGLNIANDWLCFADCLNQYIARNQDYSVLKFSSFLPVVFHFLYA--AYNPARVQFPHGQFEAKQKHQKTTNLLTSLLSDMTPMTQKFTNSTNLTLDLLSPMLDILQPT-LRPVNTQLYSTKEKEELANVVKIMIAYNMTYHQEKSPDGQYVYALDPNVEEVIKFP-GLKQRKQLTYGAKQMIAREISLEKMRRAEAVRNKSSNPSVPQATNAAPAKKKSGPAVPNHLQKL-EAKN------IAPPKAAVNF-FGNLVRTKREKTQSKDAAEEEIKQDKDKKELLDTDIWFHFKEGFSNAVRRTVKVEDL 946
BLAST of Chromosome transmission fidelity factor 18 vs. TrEMBL
Match: A0A210QQS4 (Chromosome transmission fidelity protein 18-like OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT05076 PE=4 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 8.643e-115 Identity = 281/789 (35.61%), Postives = 411/789 (52.09%), Query Frame = 3 Query: 258 WTRPSYSDCVNVTLSSGHRCYVKVNNEIN---DFSNSTMNVSFKVASQSFYSILDE-ANELFKKRERKSIQHSE----------------------------NISASSKTL-WVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTN--------FEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLATTGKNSNEL--------ATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQ-GSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKKXXXXXXXXXXXXXXRIGFIMQKAEEYKNKSTINCVAKYKDAYNF------RLGP--KKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 + R D V T G + Y+K+ +EI +FSN +V +Q LDE ++L +R++K ++ +E N+ + SK L WV KYAP +Y DLLS E NR+LL WLK WD VFN+ K +K EE L K PV+KV LL+GPPGLGKTTLA I+AR GY VEINASDDRS +VFK +IEA + + D +P CL++DEIDG A+N+L+N I KT+ + GKKKE L RPIICICND Y SLR LR VI + +L RL E+ + E+L+ D N L + + ++ DIRSCLNTLQFI H+ + ++ L+ +N+GQKD +F +W DIFT P KR+ NE A R +N+L S+G+ +K+I G+ ENYL ++KD ++G+ A DW+ F D TN YI KQ + + Y + FH+ FAS I+YP S A K +++ + +T+ S+ +++ + V+++ LP L++II P LRPINTQLYS++EK L + IMI+ + Y Q++ + QY Y L+P ++E+ KF L +++LTY+ KQLIA E ER +++R + + + + N+ + FI K+ ++ + +F R P K + E + ++LN VWF FK G+ NA+RR V+++D Sbjct: 178 FRRIPSGDFVGTTGYEGQKVYMKIKDEIEQDIEFSNVGKSVK---KTQLLAVSLDELKDQLEIERQQKLMEEAERLTQEIHSNLREDNLDGSEADDEDEITDNVQSDSKGLLWVEKYAPVQYTDLLSEELINRTLLHWLKLWDHVVFNKEVSTKLKDKNKKKGNDKDFKKKKFGADLLEEELD---KFNRPVQKVALLNGPPGLGKTTLAHILARHAGYNMVEINASDDRSVDVFKTKIEAATQMKSVLEADP------RPNCLVIDEIDGAPQPAINMLLNLI---KKTDEGS---GKKKEGGILL--RPIICICNDQYVPSLRLLRQNAMVITFPQTEPAKLASRLYEVTRKESLKADMNSLLALCEKTDNDIRSCLNTLQFI-HRHCKE-LSIRLIQTMNVGQKDSQRSLFSVWNDIFTLPRPKRNRFLNINDLKNEEWKVNNTSDAARFQNVLQATYSSGEYEKVIQGLFENYLE-CKYKDPKMEGLNFALDWLCFVDRTNQYIAHKQDYCLLPYIPYVTVTFHMLFASNQA--PRIQYPHSQYEASVKLTKSQNLVTAMMTDMIPSVRKYLDQGKTVLEV-LPPLMDIIMPT-LRPINTQLYSTREKEELAQLIRIMIAYNMTYLQEKSPDGQYIYSLDPKVDEVVKF-LGMKQQRQLTYAAKQLIARE-TSERSVGEEVSRNRGGSTSLSSSNQSKTDE-AFIPNHKRRLDPKA-VSVAPEEVIVRDFFGRIIKRKTPEAKPKQTAGGEEVKKKKNVLNTDVWFHFKGGFSNAVRRNVRVQDF 935
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Cavefish
Match: ENSAMXT00000018920.2 (chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:103034856]) HSP 1 Score: 363.229 bits (931), Expect = 3.385e-111 Identity = 273/801 (34.08%), Postives = 412/801 (51.44%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYVKVNNEIND------FSNSTMNVSF----------KVASQSFYSILDEAN------------ELFKKRERKSIQHSEN--ISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKL------IYNFNTGNKGTNF-------EEVLQINPKDQM--PVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAI--LASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKR--------SYLATTG-KNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSR--QEVVQL-MLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKKXXXXXXXXXXXXXXRIGFI-----MQKAEEYKNKSTINCVAKYKDAYNFRLGPKKGNS---TKDENLNPVL------SILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 P+ D + VT S G+R Y+ + F NS ++ +VA + +++E+ EL E + ++ + S LWV ++AP+ Y++LLS + NR LL WLK WD VF R K + N N+ F EE+L+ DQ P KV LLSGPPGLGKTTLA I+AR GY VEINASDDRS E+F+ RI DT + + G + KP CL++DEIDG AA+NIL+ + S + E+S+ KKK+K + RPIICICNDLYA +LR LR +++ P ++L +RL+EI + + ++ D L + + ++ DIRSC+NTLQF+ H + +V++++IG KD + G+F +WQ+IF P LKR L G K+ N+ R ++IL + S G+ +K+ G+++N+LS+ + KD L G+ DW+ F+D+ N I Q + + RY + + FH FA+ ++ I YP S A Q K+ S +T I I+SR Q + L L L+ +I P LRP+N QLYS++EK L ++ MI+ L Y QDR E QY YVL PN+E++ +F +K+LTY KQLIA E E+++R + K++ + E + + + Q+ E K T+ D + + PK+ + + E+ P L ++ N VWF+F EG NA+RR V +++L Sbjct: 170 PATGDYITVTDSMGNRVYLNKKEDEEKAPDPRLFRNSLNSLGLLCVPIEVLREQVAERRHRQLVEESQRLTQLLNSGIDPELLADEETEDAGEGDDGTVDEGSSRLWVDRFAPKHYMELLSDDFTNRCLLKWLKLWDTVVFGRERKPRPAVPEVRPNATNAQNQNQAQRFKTKSQITEEILEAE-LDQYKRPKYKVALLSGPPGLGKTTLAHIIARHAGYNVVEINASDDRSAELFQKRI----DTATQMKSVLGANE--KPNCLVIDEIDGAPSAAINILLTTLNRKDSREGEDSSANPLKKKKKKESVLLRPIICICNDLYAPALRPLRQQAFLLTFPPTQPSRLAQRLAEITRWQGMKADTGSLMALCEKTDNDIRSCINTLQFL-HGRGQKQLDQRVVNSMSIGLKDQNKGLFSLWQEIFQLPRLKRKRAGGDVFGALEEAGLKDGNQ---RLQHILHMVSSNGEHEKLTQGLYDNFLSM-KLKDPGLLGVCSGLDWLCFSDVVNETIMHGQNYSLMRYLPFLPAAFHFLFAANSV--PRISYPNSHYEALTKTQHNKNAVISMLT---EIPPAIRSRICQSTLCLDFLSLLMELICPR-LRPVNPQLYSTREKQQLCELIDTMINYNLTYRQDRTPEGQYTYVLEPNVEDVVRFP-GLPPRKQLTYQVKQLIARETELEKMRRVEQAHQKRNPQKVVEKEQQVKKPVTTKPTSKNHQQRLENIVKQTVVEAKPELDFFGRAIVPKEKPAVCLSTGEDGKPNLTLQIGKAVGNSDVWFRFNEGVSNAVRRNVYIREL 951
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Cavefish
Match: ENSAMXT00000050361.1 (chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:103034856]) HSP 1 Score: 352.443 bits (903), Expect = 6.101e-108 Identity = 249/696 (35.78%), Postives = 368/696 (52.87%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYVKVNNEIND------FSNSTMNVSF----------KVASQSFYSILDEAN------------ELFKKRERKSIQHSEN--ISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKL------IYNFNTGNKGTNF-------EEVLQINPKDQM--PVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAI--LASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKR--------SYLATTG-KNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSR--QEVVQL-MLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKK 2177 P+ D + VT S G+R Y+ + F NS ++ +VA + +++E+ EL E + ++ + S LWV ++AP+ Y++LLS + NR LL WLK WD VF R K + N N+ F EE+L+ DQ P KV LLSGPPGLGKTTLA I+AR GY VEINASDDRS E+F+ RI DT + + G + KP CL++DEIDG AA+NIL+ + S + E+S+ KKK+K + RPIICICNDLYA +LR LR +++ P ++L +RL+EI + + ++ D L + + ++ DIRSC+NTLQF+ H + +V++++IG KD + G+F +WQ+IF P LKR L G K+ N+ R ++IL + S G+ +K+ G+++N+LS+ + KD L G+ DW+ F+D+ N I Q + + RY + + FH FA+ ++ I YP S A Q K+ S +T I I+SR Q + L L L+ +I P LRP+N QLYS++EK L ++ MI+ L Y QDR E QY YVL PN+E++ +F +K+LTY KQLIA E E+++R + K+ Sbjct: 170 PATGDYITVTDSMGNRVYLNKKEDEEKAPDPRLFRNSLNSLGLLCVPIEVLREQVAERRHRQLVEESQRLTQLLNSGIDPELLADEETEDAGEGDDGTVDEGSSRLWVDRFAPKHYMELLSDDFTNRCLLKWLKLWDTVVFGRERKPRPAVPEVRPNATNAQNQNQAQRFKTKSQITEEILEAE-LDQYKRPKYKVALLSGPPGLGKTTLAHIIARHAGYNVVEINASDDRSAELFQKRI----DTATQMKSVLGANE--KPNCLVIDEIDGAPSAAINILLTTLNRKDSREGEDSSANPLKKKKKKESVLLRPIICICNDLYAPALRPLRQQAFLLTFPPTQPSRLAQRLAEITRWQGMKADTGSLMALCEKTDNDIRSCINTLQFL-HGRGQKQLDQRVVNSMSIGLKDQNKGLFSLWQEIFQLPRLKRKRAGGDVFGALEEAGLKDGNQ---RLQHILHMVSSNGEHEKLTQGLYDNFLSM-KLKDPGLLGVCSGLDWLCFSDVVNETIMHGQNYSLMRYLPFLPAAFHFLFAANSV--PRISYPNSHYEALTKTQHNKNAVISMLT---EIPPAIRSRICQSTLCLDFLSLLMELICPR-LRPVNPQLYSTREKQQLCELIDTMINYNLTYRQDRTPEGQYTYVLEPNVEDVVRFP-GLPPRKQLTYQVKQLIARETELEKMRRVEQAHQKR 846
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Cavefish
Match: ENSAMXT00000052669.1 (chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:103034856]) HSP 1 Score: 352.058 bits (902), Expect = 1.695e-107 Identity = 249/696 (35.78%), Postives = 368/696 (52.87%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYVKVNNEIND------FSNSTMNVSF----------KVASQSFYSILDEAN------------ELFKKRERKSIQHSEN--ISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKL------IYNFNTGNKGTNF-------EEVLQINPKDQM--PVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAI--LASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKR--------SYLATTG-KNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSR--QEVVQL-MLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKK 2177 P+ D + VT S G+R Y+ + F NS ++ +VA + +++E+ EL E + ++ + S LWV ++AP+ Y++LLS + NR LL WLK WD VF R K + N N+ F EE+L+ DQ P KV LLSGPPGLGKTTLA I+AR GY VEINASDDRS E+F+ RI DT + + G + KP CL++DEIDG AA+NIL+ + S + E+S+ KKK+K + RPIICICNDLYA +LR LR +++ P ++L +RL+EI + + ++ D L + + ++ DIRSC+NTLQF+ H + +V++++IG KD + G+F +WQ+IF P LKR L G K+ N+ R ++IL + S G+ +K+ G+++N+LS+ + KD L G+ DW+ F+D+ N I Q + + RY + + FH FA+ ++ I YP S A Q K+ S +T I I+SR Q + L L L+ +I P LRP+N QLYS++EK L ++ MI+ L Y QDR E QY YVL PN+E++ +F +K+LTY KQLIA E E+++R + K+ Sbjct: 122 PATGDYITVTDSMGNRVYLNKKEDEEKAPDPRLFRNSLNSLGLLCVPIEVLREQVAERRHRQLVEESQRLTQLLNSGIDPELLADEETEDAGEGDDGTVDEGSSRLWVDRFAPKHYMELLSDDFTNRCLLKWLKLWDTVVFGRERKPRPAVPEVRPNATNAQNQNQAQRFKTKSQITEEILEAE-LDQYKRPKYKVALLSGPPGLGKTTLAHIIARHAGYNVVEINASDDRSAELFQKRI----DTATQMKSVLGANE--KPNCLVIDEIDGAPSAAINILLTTLNRKDSREGEDSSANPLKKKKKKESVLLRPIICICNDLYAPALRPLRQQAFLLTFPPTQPSRLAQRLAEITRWQGMKADTGSLMALCEKTDNDIRSCINTLQFL-HGRGQKQLDQRVVNSMSIGLKDQNKGLFSLWQEIFQLPRLKRKRAGGDVFGALEEAGLKDGNQ---RLQHILHMVSSNGEHEKLTQGLYDNFLSM-KLKDPGLLGVCSGLDWLCFSDVVNETIMHGQNYSLMRYLPFLPAAFHFLFAANSV--PRISYPNSHYEALTKTQHNKNAVISMLTE---IPPAIRSRICQSTLCLDFLSLLMELICPR-LRPVNPQLYSTREKQQLCELIDTMINYNLTYRQDRTPEGQYTYVLEPNVEDVVRFP-GLPPRKQLTYQVKQLIARETELEKMRRVEQAHQKR 798
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Cavefish
Match: ENSAMXT00000055823.1 (chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:103034856]) HSP 1 Score: 352.058 bits (902), Expect = 6.198e-107 Identity = 249/696 (35.78%), Postives = 368/696 (52.87%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYVKVNNEIND------FSNSTMNVSF----------KVASQSFYSILDEAN------------ELFKKRERKSIQHSEN--ISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKL------IYNFNTGNKGTNF-------EEVLQINPKDQM--PVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAI--LASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKR--------SYLATTG-KNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSR--QEVVQL-MLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKK 2177 P+ D + VT S G+R Y+ + F NS ++ +VA + +++E+ EL E + ++ + S LWV ++AP+ Y++LLS + NR LL WLK WD VF R K + N N+ F EE+L+ DQ P KV LLSGPPGLGKTTLA I+AR GY VEINASDDRS E+F+ RI DT + + G + KP CL++DEIDG AA+NIL+ + S + E+S+ KKK+K + RPIICICNDLYA +LR LR +++ P ++L +RL+EI + + ++ D L + + ++ DIRSC+NTLQF+ H + +V++++IG KD + G+F +WQ+IF P LKR L G K+ N+ R ++IL + S G+ +K+ G+++N+LS+ + KD L G+ DW+ F+D+ N I Q + + RY + + FH FA+ ++ I YP S A Q K+ S +T I I+SR Q + L L L+ +I P LRP+N QLYS++EK L ++ MI+ L Y QDR E QY YVL PN+E++ +F +K+LTY KQLIA E E+++R + K+ Sbjct: 170 PATGDYITVTDSMGNRVYLNKKEDEEKAPDPRLFRNSLNSLGLLCVPIEVLREQVAERRHRQLVEESQRLTQLLNSGIDPELLADEETEDAGEGDDGTVDEGSSRLWVDRFAPKHYMELLSDDFTNRCLLKWLKLWDTVVFGRERKPRPAVPEVRPNATNAQNQNQAQRFKTKSQITEEILEAE-LDQYKRPKYKVALLSGPPGLGKTTLAHIIARHAGYNVVEINASDDRSAELFQKRI----DTATQMKSVLGANE--KPNCLVIDEIDGAPSAAINILLTTLNRKDSREGEDSSANPLKKKKKKESVLLRPIICICNDLYAPALRPLRQQAFLLTFPPTQPSRLAQRLAEITRWQGMKADTGSLMALCEKTDNDIRSCINTLQFL-HGRGQKQLDQRVVNSMSIGLKDQNKGLFSLWQEIFQLPRLKRKRAGGDVFGALEEAGLKDGNQ---RLQHILHMVSSNGEHEKLTQGLYDNFLSM-KLKDPGLLGVCSGLDWLCFSDVVNETIMHGQNYSLMRYLPFLPAAFHFLFAANSV--PRISYPNSHYEALTKTQHNKNAVISMLTE---IPPAIRSRICQSTLCLDFLSLLMELICPR-LRPVNPQLYSTREKQQLCELIDTMINYNLTYRQDRTPEGQYTYVLEPNVEDVVRFP-GLPPRKQLTYQVKQLIARETELEKMRRVEQAHQKR 846
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Cavefish
Match: rfc1 (replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]) HSP 1 Score: 115.931 bits (289), Expect = 5.275e-26 Identity = 90/273 (32.97%), Postives = 127/273 (46.52%), Query Frame = 3 Query: 492 LWVTKYAPRKYVDLLSSE---SANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRI-EALNDTQL-----GISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTK-TVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTL 1280 LWV KY PR +L+ + S LL WL++W KH + NTK F + G+ F K LLSGPPG+GKTT A +V VGY VE+NAS RS K I E+LN+T + G S N+ + LI+DE+DG +A N+ + +G K+ KI PIIC+CND Q +R L C+ ++ P +Q+ + I E ++ L +I SN+DIR ++ L Sbjct: 632 LWVDKYRPRSLKNLIGQQGEQSCANKLLRWLQNWHKH-HSGNTKPAAARFGKFGGKDDGSGF---------------KAALLSGPPGVGKTTTAALVCEEVGYSYVEMNASCTRSKNSLKEVIAESLNNTSIKNFYTGTSQTVSNKHV-----LIMDEVDG-------------MAGNEDRGGIQEMIGLIKQS---KI--PIICMCNDRNHQKIRSLANYCFDLRFQRPRVDQIKGAMMSIAFKEGVKIPPPALNEIILASNQDIRQVMHNL 865
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001756.1 (pep scaffold:Pmarinus_7.0:GL477670:316882:341361:1 gene:ENSPMAG00000001571.1 transcript:ENSPMAT00000001756.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 345.51 bits (885), Expect = 4.099e-105 Identity = 250/832 (30.05%), Postives = 395/832 (47.48%), Query Frame = 3 Query: 267 PSYSDCVNVTLSSGHRCYVKVNNEINDFSNSTMNVSFKVASQSFYSILDEANELFK-----KRERKSIQHSENI---------------------------------SASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTG-----NKGTNFEEVLQINP---KDQM-----PVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQ--LGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAI-LASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLA-------------------TTGKNS-NELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQ-GSISQWIQSRQEVVQLMLPYL---VNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKR---ADINRYKKXXXXXXXXXXXXXXRIGFIMQKAEEYKNKSTINCVAKYKDAYNFRLGPKKGN--STKDENLNPVLSI--------LNQP-------------VWFKFKEGYCNAIRRPVKMKDL 2450 P D VNVT+ G R Y+ + + + + + MN SQ +L E+ K ++ K ++ +E S LWV ++ PR Y +LLS + NR LL WLK WD VF R K + G N++ QI +D++ P KVVLL GPPGLGKTTLA +VA GY VE+NASDDRSPEVF+ RIEA + LG S +P CL++DE+DG +AA+ L+ + K T G++++K + RPIICICNDLY +LR LR + P ++L +RL EI L+ L D +L + + + DIRSC+NTLQF++ + ++ + V +++IG KD G+F +WQ+IF P +R ++ T G+ + + A R ++L L + G+ +K+ G+ ENYL+ R KD ++ + +W+ F D+ + I Q + + RY + FH F++ + P + YP N+ F Q+ ++ + VT+ G S I++ + L+L L ++I+ P ++RP+NTQLYS++EK L V M++ L Y Q+R + QY Y+L+ N+E ++++ + +K+L+Y +QLIA E+ ER++R A I R + +G + KN + N +L P + + P L++ + +P VWF+F EG+ NA+RR + +KDL Sbjct: 167 PVTDDFVNVTVPGGDRYYLALGADSSSHA-APMNPDLSFRSQMSLQLLSVPFEMLKDQVDVQKRAKVLEEAERFVTLLNRIEDSEELGGEGGGGDDDGGGDEVDGDDGTKSTGLWVDRFTPRHYTELLSDDYMNRCLLKWLKLWDMVVFGRERKKKPPPVTAMPCRLGLVLCSGANWKSKAQITEDILEDELDAHNRPKYKVVLLCGPPGLGKTTLAHVVAHHAGYNVVEMNASDDRSPEVFRTRIEAATQMKSVLGASE--------RPNCLVIDEVDGAPLAAITTLLTLVNRKDTKETGGAATGGRRRKKEGGLLLRPIICICNDLYTPALRPLRQQALTLAFPPTMPSRLAQRLLEISSLQGLHVDMGVLLALCEKTENDIRSCINTLQFLQGRRQSEL-NIHTVQSLSIGLKDQTKGLFPVWQEIFRLPRPQRKRVSRDAAGELFPTAPWEVGVGPTEGRATMSTGAARFHSLLHLVSANGEYEKLTQGLFENYLA-ARVKDPRMELVCLGTEWLCFQDLASCSIARGQNYVLMRYLPFVAVAFHFLFSTNS--PPRLNYP----NSNFEMQRKLALSQNLVTSMIGEASAHIRTHVPALALILDSLCLILDIVSP-KMRPVNTQLYSAREKQQLSELVATMLAYNLTYRQERTQDGQYTYLLDRNMEAVARYP-SLPQRKQLSYQMRQLIAREVELERVRRTEAAAIARNSTEVRGARPSPPLICYGLGVRGCRTAGPKNHQKRLEHSLRSIVVNDKLAPPETDFFGRPVARREPALAVSVPVDGVPVPEPIEQRIGRAVGASDVWFRFNEGFSNAVRRNLHVKDL 979
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Sea Lamprey
Match: rfc1 (replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]) HSP 1 Score: 96.6709 bits (239), Expect = 1.105e-20 Identity = 78/309 (25.24%), Postives = 135/309 (43.69%), Query Frame = 3 Query: 492 LWVTKYAPRKYVDLLSSE---SANRSLLSWLKSW--DKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEA-LNDTQL-GISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIF 1397 LWV +Y P+ +++ + S LL WL++W + + + + F G K D K LLSGPPG+GKTT A +V + +G VE+NASD RS KN + L +T + G + S + + L++DE+DG +A N+ + ++S + P+IC+CND +R L C+ ++ P Q+ + + E L+ ++ +I +N+DIR L+ L ++ S+ +KD+ +G F + + +F Sbjct: 498 LWVDRYRPQSLKNIIGQQGDQSPANKLLRWLRAWHSNHGGGSGGGRKAAPSVGRFRFGGK-------------DDGSGLKAALLSGPPGVGKTTTAALVCQELGLSFVELNASDRRSKNSMKNEVATCLRNTSIEGFYHGSTAQTVSDRHVLLMDEVDG-------------MAGNEDRGGIMELIALIKQSKV----PVICMCNDRNHPKIRSLANYCFDLRFPRPRVEQIKGAMMSVAFKEGLKIPPAAMQEIILAANQDIRQVLHNLCVWSARE-KALTYDQAKSDATSAKKDLKMGPFDVARKVF 775
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001247.1 (pep scaffold:Pmarinus_7.0:GL477488:57126:74541:1 gene:ENSPMAG00000001117.1 transcript:ENSPMAT00000001247.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 52.373 bits (124), Expect = 3.939e-7 Identity = 36/142 (25.35%), Postives = 64/142 (45.07%), Query Frame = 3 Query: 492 LWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSP-EVFKNRIEALNDTQLGISNDSGNEQLMK 914 LW KY PR +++ + +A R L WLK W K +R + + + N+ + ++ + + + +LL+GPPG+GKT A+ +G+ E+N S RS + EA Q+ G +++ Sbjct: 4 LWTEKYQPRSKDEIIGNSAAVRKLHGWLKEW-KSRADREAERASRREKTESQENQSESGDDESSSSEDEDS-LCHGMLLTGPPGVGKTAAVYACAQELGFKVFEVNCSSQRSGRHILAQLREATQSHQVSKQRAGGQGSVLR 143
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Yeast
Match: CTF18 (Subunit of a complex with Ctf8p; shares some subunits with Replication Factor C and is required for sister chromatid cohesion; may have overlapping functions with Rad24p in the DNA damage replication checkpoint [Source:SGD;Acc:S000004683]) HSP 1 Score: 186.422 bits (472), Expect = 6.050e-50 Identity = 186/706 (26.35%), Postives = 327/706 (46.32%), Query Frame = 3 Query: 441 ERKSIQHSENISA--SSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAA-----VNILVNAILASNKT--ENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHK-DPNDFVATNLVS----NINIGQKDVDIGIFKIWQDIF-TEPNLKRSYLATTGKNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMK-------SICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLG--EMQYQYVLNPNIEEISKFN---LNEMSKKELTYSTKQLIANEIIRERIKRADINRYKKXXXXXXXXXXXXXXRIGFIMQKAEEYKNKSTINCVAKYKDAYNFRLGPKKGNSTKDENLNPVLS-------ILNQPV--WFKFKEGYCNAIRRPVKMKDL 2450 +R + Q + I+ S TLWV K+ P+K++DL+ +E NR +L WL+ W VF + T + ++ E ++P + P KK++LL GPPG+GKT++A ++A+ G+ EINASD+R+ + K +I L +N P CL+ DEIDG+ + V+I+ + I A+NK K K+K+K + RPIICICN+LYA SL +L+P C +I + P L+ RL+ I EN+ + ++ID++ D+R+C+N LQF+ D D A++ + KD I FKI +F +P+ ++ + +L G+ D+I+ G N V++ D ++ + +DW+ F+D+ + + E+ RY + F +F A IR N+ + +++K S+ ++ Q + R+ ++ +LPYL ++I + + N +L ++ I++ V ++ S L Q+R +++ ++P I+E+ N +NE+ K + L+A +I R K+ I++ + S Q+ K K+ +N + D + + G K +E + S NQ V W K+ EG+ NA+R+ V +L Sbjct: 96 DRTNAQKTSPITGKIGSDTLWVEKWRPKKFLDLVGNEKTNRRMLGWLRQWTPAVFKEQ-------LPKLPTEKEVSDME----LDPL-KRPPKKILLLHGPPGIGKTSVAHVIAKQSGFSVSEINASDERAGPMVKEKIYNLLFNHTFDTN---------PVCLVADEIDGSIESGFIRILVDIMQSDIKATNKLLYGQPDKKDKKRKKKRSKLLTRPIICICNNLYAPSLEKLKPFCEIIAVKRPSDTTLLERLNLICHKENMNIPIKAINDLIDLAQGDVRNCINNLQFLASNVDSRDSSASDKPACAKNTWASSNKDSPISWFKIVNQLFRKDPH-------------RDIKEQFYELLNQVELNGNSDRILQGCF-NIFPYVKYSDNGIRKPANISDWLFFHDLMYQSMYAHNG-ELLRYSALVPLVFFQTFGDIAN-KDDIRM----KNSEYEQRELKRANSDIVSLIMRHISVQSPLMASFTDRKSLIFEILPYLDSMISSDFNKIRNLKL----KQAIMEELVQLLKSFQLNLIQNRSEGFDVRGGLTIDPPIDEVVLLNPKHINEVQHKRAN-NLSSLLA-KIEENRAKKRHIDQVTEDRLQS---------------QEMHSKKVKTGLNSSSSTIDFFKNQYGLLKQTQELEETQKTIGSDETNQADDCNQTVKIWVKYNEGFSNAVRKNVTWNNL 739
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Yeast
Match: RFC1 (Subunit of heteropentameric Replication factor C (RF-C); RF-C is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon [Source:SGD;Acc:S000005743]) HSP 1 Score: 90.8929 bits (224), Expect = 3.178e-19 Identity = 109/459 (23.75%), Postives = 182/459 (39.65%), Query Frame = 3 Query: 414 EANELFKKRERKSIQ-----------HSENISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLM----KPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLATTGKNSNELATRNKNI-LALARSAGDLDKIISGIHENYL----SIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSS 1730 EA L KK E +S + +N+ LW KYAP + ++ + L +WL +W+ +K +F+ KD V + +L GPPG+GKTT A +VA+ +GY +E NASD RS + ++ D + NE+ K +I+DE+DG + VG+ + K + P+I ICN+ +R +C I+ PD N + RL I E + D N++ +I + DIR +N L I T +++ NI + I K W+ ++ G+ +++ +RN + +A D D I ENYL S+++ L+ + +AA+ + D+ I R E + S L +++ P+S Sbjct: 260 EAELLVKKEEERSKKLAATRVSGGHLERDNVVREEDKLWTVKYAPTNLQQVCGNKGSVMKLKNWLANWEN--------------------SKKNSFKHA----GKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGM-----------------SGGDRGGVGQLAQFC-RKTSTPLILICNERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVINLLSTIS-------TTTKTINHENINE------ISKAWEKNIALKPFDIAHKMLDGQIYSDIGSRNFTLNDKIALYFDDFDFTPLMIQENYLSTRPSVLKPGQSHLEAVAEAANCISLGDIVEKKI---------RSSEQLWSLLPLHAVLSSVYPAS 654
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Yeast
Match: RFC4 (Subunit of heteropentameric Replication factor C (RF-C); which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000005454]) HSP 1 Score: 59.3066 bits (142), Expect = 7.379e-10 Identity = 63/222 (28.38%), Postives = 104/222 (46.85%), Query Frame = 3 Query: 645 TGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTT----LA-QIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAI-LASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPL---CYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQ 1283 GNK T + + QI MP +++SG PG+GKTT LA +++ RS +E+NASDDR +V +N+I+ +L + G ++ +ILDE D A L + L SN T + CN QS + + PL C +++ +++RL +I KLE++++ ++ L +I + D+R +N LQ Sbjct: 24 VGNKET-IDRLQQIAKDGNMPH---MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP--PGKHKI-----VILDEADSMTAGAQQALRRTMELYSNSTRFAFA--------------------CN----QSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQ 210
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Yeast
Match: RFC3 (Subunit of heteropentameric Replication factor C (RF-C); which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000005234]) HSP 1 Score: 55.4546 bits (132), Expect = 1.542e-8 Identity = 56/194 (28.87%), Postives = 81/194 (41.75%), Query Frame = 3 Query: 720 VLLSGPPGLGKTTLAQIVARSV-----GYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLR-QLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQ 1283 +L GPPG GKT+ +AR + +E+NASDDR +V +N+I+ T+ S +ILDE D AA N L I E TK C+ + YA L L C + P + RR++ + E L+ N + +I++SN D+R LN LQ Sbjct: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFK--------LIILDEADAMTNAAQNALRRVI------ERYTKNTR--------------FCVLAN-YAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQ 213
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Yeast
Match: RFC2 (Subunit of heteropentameric Replication factor C (RF-C); RF-C is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon [Source:SGD;Acc:S000003829]) HSP 1 Score: 51.2174 bits (121), Expect = 3.109e-7 Identity = 48/199 (24.12%), Postives = 88/199 (44.22%), Query Frame = 3 Query: 720 VLLSGPPGLGKTTLAQIVARSVGYYP-------VEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPC----CLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQ 1283 +L GPPG GKT+ + + + Y P +E+NASD+R + + +++ N +L +S S ++ PC +ILDE D ++ +A A +T + V + C+ + + + L C + D + + RL I + EN++ D +L ++D+S D+R + LQ Sbjct: 61 MLFYGPPGTGKTSTILALTKEL-YGPDLMKSRILELNASDERGISIVREKVK--NFARLTVSKPSKHDLENYPCPPYKIIILDEAD-------SMTADAQSALRRTMETYSGVTR-------------FCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQ 236
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Nematostella
Match: EDO48429 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJV2]) HSP 1 Score: 323.939 bits (829), Expect = 1.681e-100 Identity = 212/590 (35.93%), Postives = 309/590 (52.37%), Query Frame = 3 Query: 492 LWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTK------------FTDKLIYNFNTGNKGTNFEEVLQINPKDQ--MPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKT---ENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLA---TTG-----------------------KNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEI 2132 LWV KY+PR + +LLS ++ NR+LL WLK WDK VF R K K +F KG + ++ D PV KV LL GPPGLGKTTLA ++A+ GY VE+NASDDR+ EVF+ +IE + S NE +P CL++DEIDG A+N+L++ + + + KK+K L++ RP+ICICND + SLRQLR V +L RL EI + E + D L + D + DIRSCLNTLQF+ + + +A V + +GQKD+ +F IW +IF P KR T G +N + L TR NIL LA S+G +K++ G+ ENYL+I +FKD L +V +W+ F+D+ I Q+F + Y + FHL +A+ S + YP+S + K ++ +S + + + +++ + + P L+ II P LRP+N QL+S++EK + + ++ MI+ L Y Q+R + QY Y L+PNIEE KF K+LTY+TKQL+A E+ Sbjct: 19 LWVEKYSPRHFTELLSDDAINRTLLQWLKLWDKVVFRRERKPVKHQPKEQKSNMDKKHNKDFRKFGKGGLDSDAWTVSSFDDNGYPVHKVALLCGPPGLGKTTLAHVIAQHAGYNVVEMNASDDRAVEVFRQKIEVATQMK---SVLGANE---RPNCLVIDEIDGAPTPAINVLLSVLKQKQSVFILLDGGEVKKGKKKKKILQLLRPVICICNDQFVPSLRQLRQQALVAVFPQTIPGRLSSRLLEIARREGVSTDMTTLLALCDKAENDIRSCLNTLQFVHRR--HGKLALEHVQSTTVGQKDLHKNLFTIWHEIFQLPKPKRKRFGLSNTVGGTQRRAEDIGFFTSDENLGVDPTQNVSSLTTRFHNILRLASSSGQYEKLMQGLFENYLNI-KFKDTGLSAVVSGTEWLEFSDVVERKILQSQSFMLRGYSSFLSVAFHLLYATPT--SSKLSYPSSQYECHLREVKTMNLLESLKSEACPRIRQVLNQRIALLDLFPLLLEIITPT-LRPVNMQLFSAREKKQVTDLIDTMIAYNLTYHQERNSDGQYNYTLDPNIEEAVKFP-GLAQHKQLTYATKQLVAREV 595
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Nematostella
Match: EDO32627 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUL3]) HSP 1 Score: 102.449 bits (254), Expect = 2.332e-22 Identity = 97/367 (26.43%), Postives = 162/367 (44.14%), Query Frame = 3 Query: 492 LWVTKYAP---RKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRI-EALNDTQLGI---SNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLV-------SNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLATTGKNSNELATRNKNILALARSAGDLDKIISGIHENYLSI 1550 +WV KY P ++ + +S R LL+W+++W K NR TK K + FN G + K LLSGPPG+GKTT A +V + +GY VE+NASD RS + + + E+L++ + SN + L L++DE+DG + + +++ KT KI PIIC+CND +Q +R L C+ ++ P Q+ + I E ++ + +I +N+DIR L+ + + ATN + QKD+ +G F + + +G +S++L+ ++K+ L D + + ENYL + Sbjct: 224 MWVDKYKPSGIKQIIGQQGDKSNMRKLLNWVRNWHK---NR-TKTLPKSSF-FNKDTDGASL---------------KAALLSGPPGVGKTTTATLVCQELGYSYVEMNASDARSKKTLEQVVSESLSNKSMDAFVGSNLAAKSGLKH--VLLMDEVDGMAGSEDRGGMQELISLIKTS---------------KI--PIICMCNDRNSQKIRSLANYCFDLRFSRPRVEQIKGAMMSIAYKEGIKIPPPAMDQIIQGANQDIRQVLHNMSM--------WTATNKTLTYDQAKQEASNAQKDIKLGPFDAIRKLL------------SGSDSSKLSLKDKSDLFFC----DYSLMPLFVQENYLMV 527
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Nematostella
Match: EDO28676 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T5T5]) HSP 1 Score: 59.3066 bits (142), Expect = 3.283e-9 Identity = 34/90 (37.78%), Postives = 53/90 (58.89%), Query Frame = 3 Query: 714 KVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRI-EALNDTQL-----------GISNDSGNEQLMKPCCLILDEIDG 947 K LLSGPPG+GKTT A +V + +GY VE+NASD RS + + + E+L++ + G++ SG + + L++DE+DG Sbjct: 98 KAALLSGPPGVGKTTTATLVCQELGYSYVEMNASDARSKKTLEQVVSESLSNKSMDAFVGSNCASKGVAAKSGLKHV-----LLMDEVDG 182
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Nematostella
Match: EDO40950 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S5R5]) HSP 1 Score: 55.0694 bits (131), Expect = 5.599e-8 Identity = 55/215 (25.58%), Postives = 88/215 (40.93%), Query Frame = 3 Query: 720 VLLSGPPGLGKTTLAQIVARSVGYYP------VEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPC----CLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEH-KDPNDFVATNLV 1331 +L GPPG GKT+ VAR + + +E+NASD+R +V +++++ + S G KPC +ILDE D +A L + E TKT C+ + ++ + L C + P L RRL EI E + + + VI +S D+R + LQ K + VA +++ Sbjct: 67 LLFYGPPGTGKTSTILAVARELYGHEMLKQRVLELNASDERGIQVIRDKVKTFSQLSASASRPDG-----KPCPPFKLVILDEADSMTPSAQAALRRTM------EKQTKTTR--------------FCLICNYVSRIIEPLTSRCSKFRFKPLSSEILERRLKEICVKEEVNCEDKAIDEVIKISEGDMRKAITFLQSAHRLKGDSGIVAEDII 256
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Medaka
Match: ENSORLT00000011025.2 (chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:101165699]) HSP 1 Score: 360.918 bits (925), Expect = 1.241e-110 Identity = 244/697 (35.01%), Postives = 375/697 (53.80%), Query Frame = 3 Query: 465 ENISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRN----TKFTDKLIYNFNT-----GNKGTN--------FEEVLQINPKDQ--MPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILA---SNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLATTGK---NSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSR--QEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRAD-INRYKKXXXXXXXXXXXXXXRIGFIMQKAEEYKNKSTINCVAKYKDAYNFRLGPKKGNSTKDENLNPVLSIL-------NQPVWFKFKEGYCNAIRRPVKMKDL 2450 EN + LWV +++P Y +LLS + NR LL WLK WD VF R T +D+ N N+ GN+ N EE+L DQ P KV LLSGPPGLGKTTLA ++A+ GY VEINASDDRS EVF+ RI DT + + G + +P CLI+DEIDG AA+NIL+ A+L+ + E +T + KKK++ + + RPIICICNDLY +LR LR +++ ++L +RLSEI + L+ D L + + ++ DIRSC+NTLQF+ + + + + ++++GQKD + G+F +WQ+IF P KR + + S A R ++IL LA S+G+ +K+ G++EN+LS+ R +D LQ + +A DW++F+D N I Q F + +Y + FH FA T + I YP A ++ S ++ T I I++R Q + L + L+ I +LRP+N QL+SS+EK ++ ++ M++ L Y QDR E QY Y+L P +EE+++F +++LTY KQ I+ E+ E+++RA+ + + E + I Q+ E ++T+ + D + + PK + ++L N VWF+F EG NA+RR V +++L Sbjct: 244 ENGEGKASRLWVDRFSPGHYTELLSDDFTNRCLLKWLKLWDTVVFGRERKTRTARSDRQTANQNSFKPNQGNQTQNRFKSKIEMTEEILDAE-LDQYRRPKFKVALLSGPPGLGKTTLAHVIAKHAGYNVVEINASDDRSAEVFQKRI----DTATQMKSVLGANE--RPNCLIIDEIDGAPAAAINILL-ALLSRKDGHGAETATDAMKKKKKREQILL-RPIICICNDLYTPALRPLRQQAFLLTFPQTQPSRLAQRLSEISSRQGLKADTGALLCLCEKTDNDIRSCINTLQFLYGRGLKQ-LDSKTIQSVSVGQKDQNKGLFHLWQEIFQLPRTKRKRIGEAFEEVPGSGSGAQRFQHILHLASSSGEYEKVSQGLYENFLSM-RVRDPNLQSVCEALDWLLFSDRLNQEILRGQNFSLMKYLPFLSVTFHFLFAHTTV--PRISYPHGHHEA---SSRLLSSRNALSTMLVDIPAAIRTRISQLTLTLDVLTLLLDIICPKLRPVNPQLFSSREKEQMRELISTMLAYNLSYRQDRTPEGQYTYMLEPRVEEVARFP-GLPPRRQLTYQAKQTISREMELEKMRRAEQLILQRNPAGKKEEKKSAAPAAIRNHQQRLENIVKQTTVESRPEV-DFFGRAVAPKPQRPQPSSDTGEGCAVLSMGTAVGNSDVWFRFNEGMSNAVRRNVYIREL 922
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Medaka
Match: rfc1 (replication factor C subunit 1 [Source:NCBI gene;Acc:101171387]) HSP 1 Score: 105.916 bits (263), Expect = 7.344e-23 Identity = 86/324 (26.54%), Postives = 132/324 (40.74%), Query Frame = 3 Query: 453 IQHSENISASSKTLWVTKYAP---RKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRI-EALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGV----AAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFT 1400 + S + LWV KY P + + +S LL WL++W Y ++G G KD K LLSGPPG+GKTT A +V +G+ VE+NAS RS K + E+LN+T + ++ + LI+DE+DG + L+ I S KI PIIC+CND +R L C+ ++ P Q+ + I E ++ L +I SN+D+R ++ L KD S+ +KD+ +G F + + +FT Sbjct: 530 VASSSGTAEGPSLLWVDKYRPQSLKAVIGQQGEQSCANKLLRWLQNW----------------YKNHSGGAGKPAAAKFSKFGKDDGSTYKAALLSGPPGVGKTTTAALVCEELGFSYVEMNASCTRSKNSLKEVVSESLNNTSIEDFYKGTSQTVSSRHVLIMDEVDGMAGNEDRGGMQELIGLIRTS-------------------KI--PIICMCNDRNHPKIRSLSNYCFDLRFQRPRVEQIKGAMMSIAYKEGVKIPPPALNEIILASNQDVRQVIHNLSMWSAKD-KVMTYDQCKSDAARARKDMKLGPFDVCRKVFT 815
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Medaka
Match: rfc1 (replication factor C subunit 1 [Source:NCBI gene;Acc:101171387]) HSP 1 Score: 105.145 bits (261), Expect = 1.317e-22 Identity = 86/324 (26.54%), Postives = 132/324 (40.74%), Query Frame = 3 Query: 453 IQHSENISASSKTLWVTKYAP---RKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRI-EALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGV----AAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFT 1400 + S + LWV KY P + + +S LL WL++W Y ++G G KD K LLSGPPG+GKTT A +V +G+ VE+NAS RS K + E+LN+T + ++ + LI+DE+DG + L+ I S KI PIIC+CND +R L C+ ++ P Q+ + I E ++ L +I SN+D+R ++ L KD S+ +KD+ +G F + + +FT Sbjct: 576 VASSSGTAEGPSLLWVDKYRPQSLKAVIGQQGEQSCANKLLRWLQNW----------------YKNHSGGAGKPAAAKFSKFGKDDGSTYKAALLSGPPGVGKTTTAALVCEELGFSYVEMNASCTRSKNSLKEVVSESLNNTSIEDFYKGTSQTVSSRHVLIMDEVDGMAGNEDRGGMQELIGLIRTS-------------------KI--PIICMCNDRNHPKIRSLSNYCFDLRFQRPRVEQIKGAMMSIAYKEGVKIPPPALNEIILASNQDVRQVIHNLSMWSAKD-KVMTYDQCKSDAARARKDMKLGPFDVCRKVFT 861
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Medaka
Match: atad5b (ATPase family AAA domain-containing protein 5 [Source:NCBI gene;Acc:101172133]) HSP 1 Score: 60.077 bits (144), Expect = 9.484e-9 Identity = 51/222 (22.97%), Postives = 101/222 (45.50%), Query Frame = 3 Query: 408 LDEANELFKKRERKSIQHS--------ENISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSP 1049 L L ++R R ++ H + S TLW KY+P+ +++ + ++ L SWLK W + ++ + ++ + G E +P ++ + VL+SGPPG+GKT ++ +G+ E+N S RS + ++++ TQ + SG ++L KP ++ I + ++ N AS K + + + ++ K+P Sbjct: 218 LSRTRRLKQQRGRPAVHHQCHSGPELHQGGSCVEDTLWTDKYSPQHSSEVIGNAASVAKLHSWLKKWKLRANQDERRKMEERRRDDDSWDCGDFQGESASEDPDEEF-LWNTVLISGPPGVGKTASVYACSQELGFKVFEVNCSSQRSGRLLLSQLK--EATQSHLVEISGADRL-KP--VVFSSIQRSEAGKTSLPKNVTSASKKA--ARRKLSSRRHKAP 431
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Medaka
Match: atad5b (ATPase family AAA domain-containing protein 5 [Source:NCBI gene;Acc:101172133]) HSP 1 Score: 59.6918 bits (143), Expect = 1.136e-8 Identity = 51/222 (22.97%), Postives = 101/222 (45.50%), Query Frame = 3 Query: 408 LDEANELFKKRERKSIQHS--------ENISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSP 1049 L L ++R R ++ H + S TLW KY+P+ +++ + ++ L SWLK W + ++ + ++ + G E +P ++ + VL+SGPPG+GKT ++ +G+ E+N S RS + ++++ TQ + SG ++L KP ++ I + ++ N AS K + + + ++ K+P Sbjct: 218 LSRTRRLKQQRGRPAVHHQCHSGPELHQGGSCVEDTLWTDKYSPQHSSEVIGNAASVAKLHSWLKKWKLRANQDERRKMEERRRDDDSWDCGDFQGESASEDPDEEF-LWNTVLISGPPGVGKTASVYACSQELGFKVFEVNCSSQRSGRLLLSQLK--EATQSHLVEISGADRL-KP--VVFSSIQRSEAGKTSLPKNVTSASKKA--ARRKLSSRRHKAP 431
BLAST of Chromosome transmission fidelity factor 18 vs. Planmine SMEST
Match: SMESG000040188.1 (SMESG000040188.1) HSP 1 Score: 1595.1 bits (4129), Expect = 0.000e+0 Identity = 791/792 (99.87%), Postives = 792/792 (100.00%), Query Frame = 3 Query: 75 MQENGSRKRKLLFDDLTDNEKKFKVLNYSEDEDSEHELQIDINPNLNQENMNEIDENFLVSWTRPSYSDCVNVTLSSGHRCYVKVNNEINDFSNSTMNVSFKVASQSFYSILDEANELFKKRERKSIQHSENISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLATTGKNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKKXXXXXXXXXXXXXXRIGFIMQKAEEYKNKSTINCVAKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 2450 MQENG+RKRKLLFDDLTDNEKKFKVLNYSEDEDSEHELQIDINPNLNQENMNEIDENFLVSWTRPSYSDCVNVTLSSGHRCYVKVNNEINDFSNSTMNVSFKVASQSFYSILDEANELFKKRERKSIQHSENISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLATTGKNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKKSNENSNELNEFSQNRIGFIMQKAEEYKNKSTINCVAKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL Sbjct: 1 MQENGNRKRKLLFDDLTDNEKKFKVLNYSEDEDSEHELQIDINPNLNQENMNEIDENFLVSWTRPSYSDCVNVTLSSGHRCYVKVNNEINDFSNSTMNVSFKVASQSFYSILDEANELFKKRERKSIQHSENISASSKTLWVTKYAPRKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLATTGKNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFKDFFLQGMVDAADWMVFNDMTNVYINSKQAFEMFRYKENIISFFHLSFASTAILPSSIRYPTSDTNAYFSHQKMKSICDSFVTNQGSISQWIQSRQEVVQLMLPYLVNIIRPNELRPINTQLYSSKEKIILQNTVNIMISTGLGYTQDRLGEMQYQYVLNPNIEEISKFNLNEMSKKELTYSTKQLIANEIIRERIKRADINRYKKSNENSNELNEFSQNRIGFIMQKAEEYKNKSTINCVAKYKDAYNFRLGPKKGNSTKDENLNPVLSILNQPVWFKFKEGYCNAIRRPVKMKDL 792
BLAST of Chromosome transmission fidelity factor 18 vs. Planmine SMEST
Match: SMESG000005481.1 (SMESG000005481.1) HSP 1 Score: 86.2705 bits (212), Expect = 5.812e-17 Identity = 98/401 (24.44%), Postives = 158/401 (39.40%), Query Frame = 3 Query: 474 SASSKTLWVTKYAP---RKYVDLLSSESANRSLLSWLKSWDKHVFNRNTKFTDKLIYNFNTGNKGTNFEEVLQINPKDQMPVKKVVLLSGPPGLGKTTLAQIVARSVGYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGV----AAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLATTGKNSNELATRNKNILALARSAGDLDKIISGIHENYLSIVRFK-----DFFLQGMVDAADWMVFNDMTNVYINS 1640 S S L+V K+ P R+ V S + L WL +W N+ G K +I D K LLSGPPG+GKTT A +VA+ +GY +E NAS RS I D + +D +++L CL++DEIDG + L++ I S KI PIICICND ++ L+ + ++ Q+ + E + + L ++ SN D+R + +Q + + +L S K+ IG F + Q +FT +K T ++L ++ N+ L + ENYL + F D ++ + +AAD + +D+ + + Sbjct: 364 STKSTVLFVDKFKPQTMRQIVGQQGDRSPAKKLSLWLSNW---------------ANNYKLGFK--------KIGEADHF---KGALLSGPPGIGKTTTAHVVAKELGYTVIEYNASITRSKSQMPGIISLTRDCK----SDCWSKELK--YCLVMDEIDGMSGNEDRGGLTELISIIKQS-------------------KI--PIICICNDRQSRKLQTIANYLLDLRFRKLTLEQMTAAVKSAMFKEKISVPDDALNEIVMASNFDLRQVFHNIQLWSA---TEMDSGDLKSEAQKSHKEFKIGPFDVVQKVFTHDKVK------TLTQKSDLFFQDYNLGGLF------------VQENYLKVAPFGCRNNVDKTMELISNAADSIAMSDIVGTKLRT 690
BLAST of Chromosome transmission fidelity factor 18 vs. Planmine SMEST
Match: SMESG000059207.1 (SMESG000059207.1) HSP 1 Score: 51.2174 bits (121), Expect = 2.242e-6 Identity = 43/194 (22.16%), Postives = 79/194 (40.72%), Query Frame = 3 Query: 723 LLSGPPGLGKTTLAQIVARSVGYYP-----VEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPC--CLILDEIDGTGVAAVNILVNAILASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQ 1283 L GPPG GKT+ A+ + +E+NASD+R V + +++ + + +G+++ + P +ILDE D AA + L + KT C+ + ++ + + C + D + + RL I EN+ +L +++MS D+R + LQ Sbjct: 66 LFYGPPGTGKTSTILAAAKDLFGLKYRDRVLELNASDERGISVIREKVKRFSQNSVSAKFRNGDDEKIIPSFKLIILDEADSMTTAAQSALRRTMEVECKTTR--------------------FCLICNYISKIIDPITSRCAKFRFKSLDRDVAISRLLTICAAENVNITQAVLSKLVEMSEGDLRQAITLLQ 239
BLAST of Chromosome transmission fidelity factor 18 vs. Planmine SMEST
Match: SMESG000041132.1 (SMESG000041132.1) HSP 1 Score: 50.8322 bits (120), Expect = 2.347e-6 Identity = 66/287 (23.00%), Postives = 127/287 (44.25%), Query Frame = 3 Query: 720 VLLSGPPGLGKTTLAQIVARSV-----GYYPVEINASDDRSPEVFKNRIEALNDTQLGISNDSGNEQLMKPCCLILDEIDGTGVAAVNILVNAI-LASNKTENSTKTVGKKKEKSPLKINRPIICICNDLYAQSLRQLRPLCYVIKIIPPDYNQLMRRLSEIGKLENLEFDHNLLRNVIDMSNRDIRSCLNTLQFIEHKDPNDFVATNLVSNINIGQKDVDIGIFKIWQDIFTEPNLKRSYLATTGKNS-NELATRNKNILALARSAGDLDKIISGIHENYLSIVRF 1559 ++++GPPG GKTT +AR++ +E+NAS+DR EV +N+I++ ++ + + G ++ +ILDE D A L + + SN T + CND ++ + ++ C +++ ++++ RL EI K+E++ + + L +I + D+R +N ++ + HK + N +FK+ + P L +S L ++ NE N++A S D+ II + +N+ I F Sbjct: 48 LIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPD--GMHKI-----IILDEGDSMTEGAQQALRRTMEMYSNTTRFAFA--------------------CND-SSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVE-LTHKGFGSVTSDN---------------VFKVCDE--PHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEF 288 The following BLAST results are available for this feature:
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Chromosome transmission fidelity factor 18 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Chromosome transmission fidelity factor 18 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 3
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 4
BLAST of Chromosome transmission fidelity factor 18 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Chromosome transmission fidelity factor 18 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 4
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30019080 ID=SMED30019080|Name=Chromosome transmission fidelity factor 18|organism=Schmidtea mediterranea sexual|type=transcript|length=2518bpback to top protein sequence of SMED30019080-orf-1 >SMED30019080-orf-1 ID=SMED30019080-orf-1|Name=SMED30019080-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=793bp MQENGSRKRKLLFDDLTDNEKKFKVLNYSEDEDSEHELQIDINPNLNQENback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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