50S ribosomal protein L7/L12

Overview
Name50S ribosomal protein L7/L12
Smed IDSMED30018954
Length (bp)539
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of 50S ribosomal protein L7/L12 (SMED30018954) t-SNE clustered cells

Violin plots show distribution of expression levels for 50S ribosomal protein L7/L12 (SMED30018954) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 50S ribosomal protein L7/L12 (SMED30018954) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 50S ribosomal protein L7/L12 (SMED30018954) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30018954

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 7

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30018954h1SMcG0018645 SmedASXL_006445SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015
FACS sorted cell population asexual adult RNA-sequencing evidence
nervous systemSMED30018954h1SMcG0018645 dd_Smed_v4_2166_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30018954h1SMcG0018645 dd_Smed_v4_2166_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30018954h1SMcG0018645 dd_Smed_v4_2166_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30018954h1SMcG0018645 dd_Smed_v4_2166_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30018954h1SMcG0018645 dd_Smed_v4_2166_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30018954h1SMcG0018645 dd_Smed_v4_2166_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Human
Match: MRPL12 (mitochondrial ribosomal protein L12 [Source:HGNC Symbol;Acc:HGNC:10378])

HSP 1 Score: 95.1301 bits (235), Expect = 3.721e-24
Identity = 67/175 (38.29%), Postives = 92/175 (52.57%), Query Frame = 1
Query:   37 IRSLLSQSQQLCKVTLLKRFCSSLLPPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMM-MGGXXXXXXXXXXXX---------XXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            +R + S   Q C+           L     D++ K YPP I  +V  I+SLTLLE++DLN LLK  L IQ   ++ MGG +         +           ++T F V+L +     KV LIKEIKN    +NLVQAKK VE  P  +K  V++ EA+KIK A E+VGG + +E
Sbjct:   34 VRHMRSSGHQRCEA----------LAGAPLDNAPKEYPPKIQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLVPMGGVMSGAVPAAAAQEAVEEDIPIAKERTHFTVRLTEAKPVDKVKLIKEIKNYIQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALEAVGGTVVLE 198          
BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Human
Match: AC139530.2 (novel protein)

HSP 1 Score: 87.4261 bits (215), Expect = 6.269e-20
Identity = 63/167 (37.72%), Postives = 86/167 (51.50%), Query Frame = 1
Query:   37 IRSLLSQSQQLCKVTLLKRFCSSLLPPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMM-MGGXXXXXXXXXXXX---------XXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACES 507
            +R + S   Q C+           L     D++ K YPP I  +V  I+SLTLLE++DLN LLK  L IQ   ++ MGG +         +           ++T F V+L +     KV LIKEIKN    +NLVQAKK VE  P  +K  V++ EA+KIK A E+
Sbjct:   34 VRHMRSSGHQRCEA----------LAGAPLDNAPKEYPPKIQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLVPMGGVMSGAVPAAAAQEAVEEDIPIAKERTHFTVRLTEAKPVDKVKLIKEIKNYIQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALEA 190          
BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Celegans
Match: mrpl-12 (Mitochondrial Ribosomal Protein, Large [Source:UniProtKB/TrEMBL;Acc:O18180])

HSP 1 Score: 92.0485 bits (227), Expect = 9.656e-24
Identity = 55/127 (43.31%), Postives = 80/127 (62.99%), Query Frame = 1
Query:  157 IVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMMMGGXXXXXXXXXXXXXX---XXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEI 528
            +  +V++I++L+LL+V+DLN  LK +LNI    +M         + E        +K  F VKL KFD TKK+ +IKEI+N  P +NLVQAKK+VE APV +K+++ + EAD++K   E  G  IEI
Sbjct:   46 VSSLVEEIANLSLLDVSDLNWALKKRLNIPDQPLMAAAAAAPAAQAEAEAASDVPQKMTFTVKLTKFDDTKKIAIIKEIRNAIPGLNLVQAKKFVETAPVNVKEDLGKAEADELKAILEKAGATIEI 172          
BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Fly
Match: mRpL12 (gene:FBgn0011787 transcript:FBtr0076511)

HSP 1 Score: 100.523 bits (249), Expect = 1.002e-26
Identity = 64/151 (42.38%), Postives = 93/151 (61.59%), Query Frame = 1
Query:   97 CSSLLPPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQM------MMGGXXXXXXXXXXXXXXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
               L+PP   + ++K   P +  IV+ I++L LLEVA+L++LLK KLN+  +                + +EE      +T F VKLVKFD  +KV LIKE+KN+   MNLVQAKK+VE AP ++K+++ +EEA+K+K A    G +IEIE
Sbjct:   33 AEKLVPPAP-EGAAKPPNPKLDSIVNNIAALNLLEVAELSTLLKQKLNLPETAFAPQFAAGPARAAPAEDEEEAAPKKVQTSFKVKLVKFDEKQKVALIKEVKNLLEGMNLVQAKKFVESAPTIVKEDIPKEEAEKLKEALSKAGAIIEIE 182          
BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Zebrafish
Match: mrpl12 (mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187])

HSP 1 Score: 98.5969 bits (244), Expect = 9.510e-26
Identity = 62/143 (43.36%), Postives = 84/143 (58.74%), Query Frame = 1
Query:  127 DDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMMMGGXXXXXXXXXXXX--------XXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            D + K Y P I  +V+ I+SLTL+EV+DLN LLK  LNIQ   MM  G +         E          +KT F +KL +F A  KV LIKE+KN    +NLVQAKK VE  P  ++  +S++EA+K+K A E+ GG + +E
Sbjct:   52 DGTPKEYSPKIQQLVNDIASLTLIEVSDLNELLKKTLNIQDVGMMSMGSMAAVPVAPPAEAEEEVAPAKKEKTHFTIKLTEFKAADKVKLIKEVKNCMEGINLVQAKKLVESLPQEIRTNISKDEAEKLKSALEAAGGTVVLE 194          
BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Zebrafish
Match: mrpl12 (mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187])

HSP 1 Score: 97.0561 bits (240), Expect = 4.344e-25
Identity = 63/148 (42.57%), Postives = 86/148 (58.11%), Query Frame = 1
Query:  127 DDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMMMGGXXXX-------------XXXXXXXXXXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            D + K Y P I  +V+ I+SLTL+EV+DLN LLK  LNIQ   MM  G +                 +E  P   +KT F +KL +F A  KV LIKE+KN    +NLVQAKK VE  P  ++  +S++EA+K+K A E+ GG + +E
Sbjct:   52 DGTPKEYSPKIQQLVNDIASLTLIEVSDLNELLKKTLNIQDVGMMSMGSMAAVPVAPPAELTEGLAEEEVAPAKKEKTHFTIKLTEFKAADKVKLIKEVKNCMEGINLVQAKKLVESLPQEIRTNISKDEAEKLKSALEAAGGTVVLE 199          
BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Xenopus
Match: mrpl12 (mitochondrial ribosomal protein L12 [Source:NCBI gene;Acc:448724])

HSP 1 Score: 108.612 bits (270), Expect = 1.550e-29
Identity = 71/179 (39.66%), Postives = 102/179 (56.98%), Query Frame = 1
Query:   22 SIASMIRSLLSQSQQLCKVTLLKRFCSSLLPPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMM-MGGXXXXXXXXXXXXXXXX--------XWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            +++S +R     + +L + T      +  LP  + D++ K YPP I ++VD+I+SLTLLEV++ N LL+  L IQ   MM MG  +   T        +         T F VKL + +AT KV LIKE+KN    +NLVQAKK VE  P  +K  VS++EA+KIK A E+ GG + +E
Sbjct:   13 AVSSALRRFEISTVRLLRTT--SELKNQALPSPSLDNAPKEYPPKIHNLVDQIASLTLLEVSEFNELLRKTLKIQDVGMMPMGSMLSGATAAPSQAAEEAEAPGKKEKTHFTVKLTEVNATDKVKLIKEVKNCIQGLNLVQAKKLVEALPQEIKANVSKDEAEKIKAALEAAGGKVALE 189          
BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Mouse
Match: Mrpl12 (mitochondrial ribosomal protein L12 [Source:MGI Symbol;Acc:MGI:1926273])

HSP 1 Score: 94.3597 bits (233), Expect = 4.817e-24
Identity = 65/147 (44.22%), Postives = 87/147 (59.18%), Query Frame = 1
Query:  127 DDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMM-MGGX-----------XXXXXXXXXXXXXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            D++ K YPP I  +V  I+SLTLLE++DLN LLK  L IQ   +M MGG                 +E+ P+  ++T F V+L +     KV LIKEIKN    +NLVQAKK VE  P  +K  V++ EA+KIK A E+VGG + +E
Sbjct:   55 DNAPKEYPPKIQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLMPMGGMVPGPVSAAAPASEAAEEEDVPKQKERTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALEAVGGTVVLE 201          
BLAST of 50S ribosomal protein L7/L12 vs. UniProt/SwissProt
Match: sp|Q7YR75|RM12_BOVIN (39S ribosomal protein L12, mitochondrial OS=Bos taurus OX=9913 GN=MRPL12 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.569e-26
Identity = 74/183 (40.44%), Postives = 100/183 (54.64%), Query Frame = 1
Query:   28 ASMIRSLLSQSQQLCKVTLLKRFCSS-----LLPPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMM-MGGXXXXXXXXXXX---------XXXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            A+ +R +  Q   +C V L++  CSS      L     D++ K YPP I  +V  I+SLTLLE++DLN LLK  L IQ   +M MGG V                  +  ++T F V+L +     KV LIKEIKN    +NLVQAKK VE  P  +K  V++ EA+KIK A E+VGG + +E
Sbjct:   18 AAALRLVRQQVPHVCAVRLMR--CSSHRRGEALTGAPLDNAPKEYPPKIQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLMPMGGMVPGAAPAPTAPEAAEEDVPKQKERTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALEAVGGTVVLE 198          
BLAST of 50S ribosomal protein L7/L12 vs. UniProt/SwissProt
Match: sp|P52815|RM12_HUMAN (39S ribosomal protein L12, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL12 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.787e-23
Identity = 67/175 (38.29%), Postives = 92/175 (52.57%), Query Frame = 1
Query:   37 IRSLLSQSQQLCKVTLLKRFCSSLLPPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMM-MGGXXXXXXXXXXXX---------XXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            +R + S   Q C+           L     D++ K YPP I  +V  I+SLTLLE++DLN LLK  L IQ   ++ MGG +         +           ++T F V+L +     KV LIKEIKN    +NLVQAKK VE  P  +K  V++ EA+KIK A E+VGG + +E
Sbjct:   34 VRHMRSSGHQRCEA----------LAGAPLDNAPKEYPPKIQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLVPMGGVMSGAVPAAAAQEAVEEDIPIAKERTHFTVRLTEAKPVDKVKLIKEIKNYIQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALEAVGGTVVLE 198          
BLAST of 50S ribosomal protein L7/L12 vs. UniProt/SwissProt
Match: sp|Q9DB15|RM12_MOUSE (39S ribosomal protein L12, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl12 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 3.369e-23
Identity = 65/147 (44.22%), Postives = 87/147 (59.18%), Query Frame = 1
Query:  127 DDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMM-MGGX-----------XXXXXXXXXXXXXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            D++ K YPP I  +V  I+SLTLLE++DLN LLK  L IQ   +M MGG                 +E+ P+  ++T F V+L +     KV LIKEIKN    +NLVQAKK VE  P  +K  V++ EA+KIK A E+VGG + +E
Sbjct:   55 DNAPKEYPPKIQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLMPMGGMVPGPVSAAAPASEAAEEEDVPKQKERTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALEAVGGTVVLE 201          
BLAST of 50S ribosomal protein L7/L12 vs. UniProt/SwissProt
Match: sp|P52827|RM12_CRICR (39S ribosomal protein L12, mitochondrial OS=Cricetus cricetus OX=10034 GN=MRPL12 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.271e-23
Identity = 63/148 (42.57%), Postives = 84/148 (56.76%), Query Frame = 1
Query:  127 DDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMM-MGGXXXXXXXXXXX------------XXXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            D++ K YPP I  +V  I+SLTLLE++DLN LLK  L IQ   +M MGG +                     +  ++T F V+L +     KV LIKEIKN    +NLVQAKK VE  P  +K  V++ EA+KIK A E+VGG + +E
Sbjct:   56 DNAPKEYPPKIQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLMPMGGMMPGAVPAAAAAAPEVAEGEDILKQKERTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALEAVGGTVVLE 203          
BLAST of 50S ribosomal protein L7/L12 vs. UniProt/SwissProt
Match: sp|Q9USJ9|MNP1_SCHPO (54S ribosomal protein L12, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrpl12 PE=3 SV=2)

HSP 1 Score: 63.929 bits (154), Expect = 6.783e-12
Identity = 57/166 (34.34%), Postives = 91/166 (54.82%), Query Frame = 1
Query:   34 MIRSLLSQSQQLCKVTLLKRFCSSLLPPTTTDDSSKLYP--PHIVDIVDKISSLTLLEVADLNSLLKSKLNI-------QASQMMMGGXXXXXXXXXXXXXXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACE 504
            M R    Q++ L  ++  K +  SL+   +   ++ +      I ++VDKISSL+LLE ++L   LK KLNI         +  +      ++   EE +  K TW ++KL  FDA  K  +IKE+K++   ++LV AKK+VE AP VLK+ + +E+A+ IK   E
Sbjct:    1 MFRIASRQTRNLRALSSSKNWARSLVNTRSFRAAASVQNNNAQIGEMVDKISSLSLLETSELVKQLKEKLNIAEIAPMAAVAPAVASAAPSEEKAPEEKKEEKTTW-NLKLESFDAGSKAKVIKEVKSLLG-LSLVDAKKFVESAPKVLKENILKEDAEAIKSKLE 164          
BLAST of 50S ribosomal protein L7/L12 vs. TrEMBL
Match: A0A0R3TJZ3 (Uncharacterized protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS7436 PE=4 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.351e-37
Identity = 84/161 (52.17%), Postives = 109/161 (67.70%), Query Frame = 1
Query:   70 CKVTLLKRFCSSLLPPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMMMG-------GXXXXXXXXXXXXXXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            C  T   R   +L  PT  + + K YP +IV IVD+I++LT+LEVADLN LL +KLNI+A    MG           ++  EE  +   KT + VKL+KFD  KKVPLIKEIKN+ P+MNLVQAKK+VE AP VLKK++S+EEADKIK + ES G ++E+E
Sbjct:   30 CYSTATPRVSENLNGPTL-EAAEKKYPQNIVRIVDQIAALTILEVADLNELLSNKLNIKAPTYSMGFMPPQQASGTKKEEAEEAEQAPTKTSYAVKLMKFDEAKKVPLIKEIKNILPDMNLVQAKKFVEAAPGVLKKDLSKEEADKIKKSLESCGALVELE 189          
BLAST of 50S ribosomal protein L7/L12 vs. TrEMBL
Match: A0A0R3SMI1 (Uncharacterized protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS6144 PE=4 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.700e-34
Identity = 82/171 (47.95%), Postives = 106/171 (61.99%), Query Frame = 1
Query:   40 RSLLSQSQQLCKVTLLKRFCSSLLPPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMMMG-------GXXXXXXXXXXXXXXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            + L+ +S   C  T   +    L  P   +   K YP  IV IVD+I++LTLLEVADLN LL  KLNI A    MG        P  ++  +E  +   K+ + VKL+KFDA KKV LIKEIKN+ P+MNLVQAKK+VE AP +LKK++S+EEAD IK A E  G  +E+E
Sbjct:   20 KRLIQRSVFSCYSTAASQIAEYLKAPAL-EGVEKEYPERIVKIVDQIAALTLLEVADLNELLSKKLNIHAPTHSMGFMPVQETAPAKKEEADEAEQAPVKSSYAVKLMKFDAVKKVQLIKEIKNILPDMNLVQAKKFVEAAPGILKKDLSKEEADDIKKALEVCGASVELE 189          
BLAST of 50S ribosomal protein L7/L12 vs. TrEMBL
Match: A0A183N289 (Uncharacterized protein OS=Schistosoma margrebowiei OX=48269 GN=SMRZ_LOCUS22414 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.905e-34
Identity = 79/147 (53.74%), Postives = 101/147 (68.71%), Query Frame = 1
Query:  106 LLPPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMMM-----GGXXXXXXXXXXXXXXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            L+PP+ + D+ K YP HI +IV++ISSLTLLEVADL+ LL+ KLNI+ +  MM             + EE +   KT F VKLVKFDA KK+ LIKEIK + PEMNLVQAKK+VE AP  +K +VS++EA++IK   E VG  I IE
Sbjct:   36 LVPPSFSADN-KEYPKHIHEIVNRISSLTLLEVADLSELLQKKLNIKNAGPMMPMMVQAPTNQPPEELEEQQAPTKTAFSVKLVKFDAAKKIQLIKEIKQVIPEMNLVQAKKFVESAPANIKTDVSKDEAEQIKKVLEEVGASIAIE 181          
BLAST of 50S ribosomal protein L7/L12 vs. TrEMBL
Match: A0A183P9K0 (Uncharacterized protein OS=Schistosoma mattheei OX=31246 GN=SMTD_LOCUS11036 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.571e-34
Identity = 80/147 (54.42%), Postives = 102/147 (69.39%), Query Frame = 1
Query:  106 LLPPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMMM-----GGXXXXXXXXXXXXXXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            L+PP+ + D+ K YP HI +IV++ISSLTLLEVADL+ LL+ KLNI+ +  MM             + EE +V  KT F VKLVKFDA KK+ LIKEIK + PEMNLVQAKK+VE AP  +K +VS++EA++IK   E VG  I IE
Sbjct:   11 LVPPSFSADN-KEYPKHIHEIVNRISSLTLLEVADLSELLQKKLNIKNTGPMMPMMVQAPTNQPPEEPEEQQVPTKTAFSVKLVKFDAAKKIQLIKEIKQVIPEMNLVQAKKFVESAPANIKTDVSKDEAEQIKKVLEEVGASIAIE 156          
BLAST of 50S ribosomal protein L7/L12 vs. TrEMBL
Match: A0A1Z5KY28 (Uncharacterized protein (Fragment) OS=Ornithodoros moubata OX=6938 PE=4 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.572e-34
Identity = 79/178 (44.38%), Postives = 110/178 (61.80%), Query Frame = 1
Query:   25 IASMIRSLLSQSQQL--CKVTLLKRFCSSLLPPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMMMGG-------XXXXXXXXXXXXXXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            +++  R L +   +L  C V  L+ + + +L     +   K YP  I+ IVD+IS LTLLEVADLN LLK  LNIQ + MM GG          ++ +E       +T F VKL+KFD +KK+ LIKE+KN+   +NLVQAKK+VE AP V+K ++ ++EADK+K A E+ GG  EIE
Sbjct:   15 VSTTARCLRNAQNRLPVCAVHRLQ-YSTQILAQPLAEAEEKRYPEKIMRIVDEISKLTLLEVADLNDLLKKTLNIQETPMMAGGWAPPAAAAAKEEEEEGTTVAKVQTAFTVKLIKFDESKKIQLIKELKNLMEGINLVQAKKFVESAPQVVKADLPKDEADKLKAAIEAAGGTCEIE 191          
BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Cavefish
Match: mrpl12 (mitochondrial ribosomal protein L12 [Source:NCBI gene;Acc:103027098])

HSP 1 Score: 93.5893 bits (231), Expect = 5.862e-24
Identity = 66/150 (44.00%), Postives = 85/150 (56.67%), Query Frame = 1
Query:  112 PPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQ----------ASQMMMGGXXXXXXXXXXXXXXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            PP   D + K Y P I  +V+ ISSL+LLEV+DLN LLK  LNIQ          A+            +E  P   +KT F VKL +  A  KV LIKE+KN    +NLVQAKK VE  P  ++  VS+EEA+K+K A E+ GG + +E
Sbjct:   48 PPL--DGAPKQYSPKIQQLVNDISSLSLLEVSDLNELLKKTLNIQDVGMMSMGAMAAAPSAAVAAPAADEEPAPAKKEKTHFTVKLTELKAADKVKLIKEVKNCIQGLNLVQAKKLVESLPQEIRANVSKEEAEKLKTALEAAGGTVVLE 195          
BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Sea Lamprey
Match: mrpl12 (mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187])

HSP 1 Score: 77.7962 bits (190), Expect = 1.826e-18
Identity = 61/149 (40.94%), Postives = 80/149 (53.69%), Query Frame = 1
Query:   91 RFCSSLLPPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMMMGGXXXXXXXXXXXX-----XXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACES-VGGV 519
            R   +L  P    D  K + P +  +V  I+SL+LLEVADLN LLK  L+IQ    M            E E       +KT F V+L +   + KV LIKE+K   P +NLVQAKK VE  P  +K  V +EEA+++K A E+  GGV
Sbjct:   30 RPADALAAPPLDADPHK-FSPKVQQLVSDITSLSLLEVADLNKLLKKTLDIQDVGFMPMAAATSAAAPAEAEEDAPVKKEKTHFVVRLTEVRGSDKVKLIKEVKACIPGLNLVQAKKLVESLPQEIKANVPKEEANQLKAALEAGTGGV 177          
BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Yeast
Match: MNP1 (Mitochondrial ribosomal protein of the large subunit; has similarity to E. coli L7/L12 and human MRPL7 ribosomal proteins; associates with the mitochondrial nucleoid; required for normal respiratory growth [Source:SGD;Acc:S000003036])

HSP 1 Score: 62.3882 bits (150), Expect = 5.298e-13
Identity = 55/144 (38.19%), Postives = 75/144 (52.08%), Query Frame = 1
Query:  151 PHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMMM-----------------GGXXXXXXXXXXXXXXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            P I  IV  IS LTLLE + L + LK+ LNI    M M                          EEE +   KT F VKL  FD   K  +IKE+K +   ++LV+AKK+VE AP VLK+ V++++A+KIK   E +G  + +E
Sbjct:   52 PKISKIVQDISQLTLLETSSLINELKTVLNIPEISMPMGGFMAGAAGAGAGNVPSSTGEAGSGAEEEAKPEAKTVFTVKLDSFDTKTKAKVIKEVKGLL-GLSLVEAKKFVEAAPKVLKENVAKDDAEKIKKTLEDLGAKVSLE 194          
BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Nematostella
Match: EDO35026 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SMP9])

HSP 1 Score: 115.546 bits (288), Expect = 2.144e-33
Identity = 76/149 (51.01%), Postives = 96/149 (64.43%), Query Frame = 1
Query:  100 SSLLPPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQ-----ASQMMMGGXXXXXXXXXXXXXXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            SSL  P   DDS + YP HI  IVD IS LTLLEV++LN LLK  L IQ     A+  M      Q   EE  +  + T F VKL  FDA  KV LIKEIKN+ P MNLVQAKK+VEG P  ++++V++EE++++K A E+ GG +EIE
Sbjct:    2 SSLAAPDA-DDSQRHYPNHIKKIVDDISKLTLLEVSELNELLKVTLKIQDVPMMAAGAMSAPAAAQAASEEPEKEAEPTEFTVKLTGFDAAAKVKLIKEIKNLIPGMNLVQAKKFVEGLPQNVREKVNKEESEQLKKALEAAGGTVEIE 149          
BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Medaka
Match: mrpl12 (mitochondrial ribosomal protein L12 [Source:NCBI gene;Acc:101164893])

HSP 1 Score: 109.383 bits (272), Expect = 5.030e-30
Identity = 75/175 (42.86%), Postives = 95/175 (54.29%), Query Frame = 1
Query:   40 RSLLSQSQQLCKVTLLKRFCSS---LLPPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMM-MGGXXXXXXXXXXXX-------XXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            + L  Q   LC + LLK  C S     PP   D + K Y P +  +V+ I+SLTLLEV+DLN LLK  LNIQ   MM MG                      +KT F VKL +  A  KV LIKE+KN    +NLVQAKK VE  P  ++  VS+EEA+K+K A E+ GG + +E
Sbjct:   23 QQLQHQVPSLCALRLLKTSCHSETIATPPL--DGAPKQYSPKVQQLVNDIASLTLLEVSDLNELLKKTLNIQDVGMMPMGAMAASAMPATPAADEEEAPAKKEKTHFTVKLTELKAADKVKLIKEVKNCIQGLNLVQAKKLVESLPQEIRANVSKEEAEKLKAALEAAGGTVVLE 195          
BLAST of 50S ribosomal protein L7/L12 vs. Planmine SMEST
Match: SMESG000026245.1 (SMESG000026245.1)

HSP 1 Score: 293.508 bits (750), Expect = 4.125e-103
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1
Query:   34 MIRSLLSQSQQLCKVTLLKRFCSSLLPPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMMMGGXXXXXXXXXXXXXXXXXWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 531
            MIRSLLSQSQQLCKVTLLKRFCSSLLPPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMMMGGPVVQQTKEEEPEVVKKTWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE
Sbjct:    1 MIRSLLSQSQQLCKVTLLKRFCSSLLPPTTTDDSSKLYPPHIVDIVDKISSLTLLEVADLNSLLKSKLNIQASQMMMGGPVVQQTKEEEPEVVKKTWFDVKLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEADKIKIACESVGGVIEIE 166          
The following BLAST results are available for this feature:
BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 2
Match NameE-valueIdentityDescription
MRPL123.721e-2438.29mitochondrial ribosomal protein L12 [Source:HGNC S... [more]
AC139530.26.269e-2037.72novel protein[more]
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BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mrpl-129.656e-2443.31Mitochondrial Ribosomal Protein, Large [Source:Un... [more]
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BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mRpL121.002e-2642.38gene:FBgn0011787 transcript:FBtr0076511[more]
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BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
mrpl129.510e-2643.36mitochondrial ribosomal protein L12 [Source:ZFIN;A... [more]
mrpl124.344e-2542.57mitochondrial ribosomal protein L12 [Source:ZFIN;A... [more]
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BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mrpl121.550e-2939.66mitochondrial ribosomal protein L12 [Source:NCBI g... [more]
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BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Mrpl124.817e-2444.22mitochondrial ribosomal protein L12 [Source:MGI Sy... [more]
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BLAST of 50S ribosomal protein L7/L12 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q7YR75|RM12_BOVIN2.569e-2640.4439S ribosomal protein L12, mitochondrial OS=Bos ta... [more]
sp|P52815|RM12_HUMAN1.787e-2338.2939S ribosomal protein L12, mitochondrial OS=Homo s... [more]
sp|Q9DB15|RM12_MOUSE3.369e-2344.2239S ribosomal protein L12, mitochondrial OS=Mus mu... [more]
sp|P52827|RM12_CRICR4.271e-2342.5739S ribosomal protein L12, mitochondrial OS=Cricet... [more]
sp|Q9USJ9|MNP1_SCHPO6.783e-1234.3454S ribosomal protein L12, mitochondrial OS=Schizo... [more]
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BLAST of 50S ribosomal protein L7/L12 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0R3TJZ31.351e-3752.17Uncharacterized protein OS=Rodentolepis nana OX=10... [more]
A0A0R3SMI12.700e-3447.95Uncharacterized protein OS=Hymenolepis diminuta OX... [more]
A0A183N2895.905e-3453.74Uncharacterized protein OS=Schistosoma margrebowie... [more]
A0A183P9K06.571e-3454.42Uncharacterized protein OS=Schistosoma mattheei OX... [more]
A0A1Z5KY286.572e-3444.38Uncharacterized protein (Fragment) OS=Ornithodoros... [more]
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BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mrpl125.862e-2444.00mitochondrial ribosomal protein L12 [Source:NCBI g... [more]
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BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mrpl121.826e-1840.94mitochondrial ribosomal protein L12 [Source:ZFIN;A... [more]
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BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
MNP15.298e-1338.19Mitochondrial ribosomal protein of the large subun... [more]
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BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO350262.144e-3351.01Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of 50S ribosomal protein L7/L12 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mrpl125.030e-3042.86mitochondrial ribosomal protein L12 [Source:NCBI g... [more]
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BLAST of 50S ribosomal protein L7/L12 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000026245.14.125e-103100.00SMESG000026245.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30018954 ID=SMED30018954|Name=50S ribosomal protein L7/L12|organism=Schmidtea mediterranea sexual|type=transcript|length=539bp
TAATTAATTTATAATAATTCTTCAATAGCATCAATGATTAGGTCATTACT
TTCTCAAAGTCAACAGTTATGTAAAGTAACTTTGTTAAAAAGATTTTGCA
GTTCTTTGTTGCCCCCTACAACTACAGATGACAGTTCTAAATTATACCCA
CCTCATATTGTAGATATAGTTGATAAAATATCTAGCTTAACTTTGTTAGA
AGTAGCAGATTTGAATTCTTTGTTAAAGTCAAAATTAAATATTCAAGCTT
CTCAAATGATGATGGGAGGGCCGGTTGTTCAACAAACTAAAGAAGAAGAG
CCTGAGGTAGTAAAAAAAACTTGGTTTGATGTCAAATTAGTTAAATTTGA
TGCGACGAAAAAAGTCCCACTAATTAAGGAAATTAAAAATATGTTTCCGG
AAATGAATTTAGTACAGGCTAAAAAATATGTTGAAGGTGCTCCTGTTGTT
CTTAAAAAAGAAGTATCACAGGAGGAAGCAGACAAAATCAAAATAGCGTG
TGAAAGTGTTGGTGGTGTTATCGAAATTGAATAAATTTG
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protein sequence of SMED30018954-orf-1

>SMED30018954-orf-1 ID=SMED30018954-orf-1|Name=SMED30018954-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=167bp
MIRSLLSQSQQLCKVTLLKRFCSSLLPPTTTDDSSKLYPPHIVDIVDKIS
SLTLLEVADLNSLLKSKLNIQASQMMMGGPVVQQTKEEEPEVVKKTWFDV
KLVKFDATKKVPLIKEIKNMFPEMNLVQAKKYVEGAPVVLKKEVSQEEAD
KIKIACESVGGVIEIE*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000429neoblast
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR000206Ribosomal_L7/12
IPR036235Ribosomal_L7/L12_oligo_N_sf
IPR013823Ribosomal_L7/L12_C
IPR014719Ribosomal_L7/12_C/ClpS-like
IPR008932Ribosomal_L7/L12_oligo
Vocabulary: biological process
TermDefinition
GO:0006412translation
Vocabulary: molecular function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: cellular component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
GO:0030529intracellular ribonucleoprotein complex
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3DG3DSA:3.30.1390.10coord: 92..166
e-value: 6.8E-18
score: 66.4
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILYSSF54736ClpS-likecoord: 94..166
IPR013823Ribosomal protein L7/L12, C-terminalPFAMPF00542Ribosomal_L12coord: 98..166
e-value: 3.6E-16
score: 59.3
IPR008932Ribosomal protein L7/L12, oligomerisationPFAMPF16320Ribosomal_L12_Ncoord: 44..79
e-value: 2.5E-10
score: 39.9
NoneNo IPR availablePANTHERPTHR45987:SF439S RIBOSOMAL PROTEIN L12, MITOCHONDRIALcoord: 29..166
NoneNo IPR availablePANTHERPTHR45987FAMILY NOT NAMEDcoord: 29..166
NoneNo IPR availablePRODOMPD001326coord: 100..165
e-value: 3.0E-14
score: 187.0
IPR000206Ribosomal protein L7/L12CDDcd00387Ribosomal_L7_L12coord: 44..165
e-value: 2.98249E-37
score: 122.649
IPR036235Ribosomal protein L7/L12, oligomerisation domain superfamilySUPERFAMILYSSF48300Ribosomal protein L7/12, oligomerisation (N-terminal) domaincoord: 42..99