GDT1 family protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30018827 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 6
Homology
BLAST of GDT1 family protein vs. Ensembl Human
Match: TMEM165 (transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]) HSP 1 Score: 224.942 bits (572), Expect = 1.886e-70 Identity = 141/267 (52.81%), Postives = 171/267 (64.04%), Query Frame = 3 Query: 246 SSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKLL--ITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDPLSN 1040 + + LGFIH F+A+I VII+SELGDKTFFIA IM++R RL V AGAMLAL MT LS G ATTVIPR TYY+S LF IFG++M+++GL + + E QEE EEVQAEL+K++ EF ++KLL D ETG S+ P Q+ S +FV++ LTFLAEWGDRSQ+TTIVLAA +D GV VGGT+GH LCTG+AVI GR IAQKI VR +T IGGI FL FA P S Sbjct: 87 TQTNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFGYATTVIPRVYTYYVSTVLFAIFGIRMLREGLKMSPD-------EGQEELEEVQAELKKKDEEFQRTKLLNGPGDVETGT-SITVP----------------------QKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISPDSG 323
BLAST of GDT1 family protein vs. Ensembl Human
Match: TMEM165 (transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]) HSP 1 Score: 114.39 bits (285), Expect = 4.218e-30 Identity = 82/167 (49.10%), Postives = 103/167 (61.68%), Query Frame = 3 Query: 483 LFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKLL--ITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTF 977 LF IFG++M+++GL K +P E QEE EEVQAEL+K++ EF ++KLL D ETG S+ P Q+ S +FV++ LTFLAEWGDRSQ+TTIVLAA +D GV VGGT+GH LCTG+AVI GR IAQKI VR +F Sbjct: 3 LFAIFGIRMLREGL--KMSP-----DEGQEELEEVQAELKKKDEEFQRTKLLNGPGDVETGT-SITVP----------------------QKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTGSF 139
BLAST of GDT1 family protein vs. Ensembl Human
Match: TMEM165 (transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]) HSP 1 Score: 71.2478 bits (173), Expect = 1.736e-14 Identity = 37/63 (58.73%), Postives = 41/63 (65.08%), Query Frame = 3 Query: 852 AATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDPLSN 1040 A +D GV VGGT+GH LCTG+AVI GR IAQKI VR +T IGGI FL FA P S Sbjct: 66 ARVEDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISPDSG 128
BLAST of GDT1 family protein vs. Ensembl Celegans
Match: Y54F10AL.1 (pep chromosome:WBcel235:III:2487769:2494340:1 gene:WBGene00021847.1 transcript:Y54F10AL.1a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y54F10AL.1) HSP 1 Score: 234.572 bits (597), Expect = 5.939e-75 Identity = 144/310 (46.45%), Postives = 191/310 (61.61%), Query Frame = 3 Query: 102 LILIVLQIWTCHSKPDKDNLLKDVKENVNKAVKDVNNIFKQEKSNIKYSSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKLLITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHT-FISD 1028 L+++V + S KD DVK + AV + + +K + K SS + F HGFLAS VI++SELGDKT+FIAVIMS+R+ RL V++GAM ALA MTVLSA LG T VIPR +TYY+S LF +FGLKM+ +G + N QE YEE QAE+ KRE E K + + GV S R +++ S++F+E+F LTF+AEWGDRSQ+TTI+L A +++ GVI GG LGHALCTGIAVI G+ +AQ+I VR +T IGG+ FL+FA+ FI+D Sbjct: 12 LLILVPHVTVAESDAVKDVDTVDVKLD-ETAVVEKTEEKEAQKEHKKISSEDISFYHGFLASFSVIVVSELGDKTWFIAVIMSMRHSRLTVFSGAMGALALMTVLSACLGWITQVIPRAVTYYLSTALFALFGLKMLHEGWTMSPNE-------GQEGYEEAQAEVAKREGELDAGKFEMLEGGGGVAS-----------------------QSETRKIFLFTSRIFIEAFSLTFVAEWGDRSQLTTIILGARENIAGVIGGGILGHALCTGIAVIGGKIVAQRISVRTVTLIGGVVFLLFALSALFIND 290
BLAST of GDT1 family protein vs. Ensembl Celegans
Match: Y54F10AL.1 (pep chromosome:WBcel235:III:2487769:2491933:1 gene:WBGene00021847.1 transcript:Y54F10AL.1b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y54F10AL.1) HSP 1 Score: 167.548 bits (423), Expect = 1.676e-49 Identity = 113/264 (42.80%), Postives = 151/264 (57.20%), Query Frame = 3 Query: 87 SCIFLLI---LIVLQIWTCHSKPDKDNLLKDVKENVNKAVKDVNNIFKQEKSNIKYSSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKLLITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDV 869 S FLL+ ++V + S KD DVK + V+ Q K + K SS + F HGFLAS VI++SELGDKT+FIAVIMS+R+ RL V++GAM ALA MTVLSA LG T VIPR +TYY+S LF +FGLKM+ +G + N QE YEE QAE+ KRE E K + + GV S + R +++ S++F+E+F LTF+AEWGDRSQ+TTI+L A +++ Sbjct: 4 SLTFLLVSLLILVPHVTVAESDAVKDVDTVDVKLDETAVVEKTEEKEAQ-KEHKKISSEDISFYHGFLASFSVIVVSELGDKTWFIAVIMSMRHSRLTVFSGAMGALALMTVLSACLGWITQVIPRAVTYYLSTALFALFGLKMLHEGWTMSPNE-------GQEGYEEAQAEVAKREGELDAGKFEMLEGGGGVASQSET-----------------------RKIFLFTSRIFIEAFSLTFVAEWGDRSQLTTIILGARENI 236
BLAST of GDT1 family protein vs. Ensembl Fly
Match: CG42542 (gene:FBgn0260659 transcript:FBtr0301102) HSP 1 Score: 223.016 bits (567), Expect = 4.859e-70 Identity = 140/323 (43.34%), Postives = 197/323 (60.99%), Query Frame = 3 Query: 96 FLLILIVLQIWTCHSKPDK-DNLL--------KDVKENVNKAVKDVNNIFKQEKSNIKYSSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQ--SKLLITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDP 1031 +++L I ++PD DN + DV+ ++N+ D++++ ++ K ++ FI F ASI VI+++ELGDKTFFIA IM++R+PRL+V+ GA+ ALA MTVLS A GMA IP+ TYYIS LFLIFGLKM+ DG Y+M P ++QEE EEVQ +LRKRE E + + L+ D E+G + R + +T F ++ ++F +TFLAEWGDRSQ+TTI+LAA+KDV GVI GG +GH +CTG+AVI GR +A KI VR +T +GGI F+ FA++ P Sbjct: 30 LMVVLTFGTICAAEAQPDSADNAVIESGIQSNLDVQGDLNRPT-DLSSLAEKPKDAADRPKTKGTFIDAFTASISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAIAALALMTVLSCAFGMAANFIPKIYTYYISTALFLIFGLKMLYDG-------YKMKPTDAQEELEEVQTDLRKREDELDRDVNAALVNDAESG--------------RRRPQKRGATYFTM----------RILAQAFTMTFLAEWGDRSQLTTIILAASKDVYGVIAGGIIGHCICTGLAVIGGRLVASKISVRTVTIVGGIVFIGFAIYAVAIPP 320
BLAST of GDT1 family protein vs. Ensembl Fly
Match: CG42542 (gene:FBgn0260659 transcript:FBtr0302324) HSP 1 Score: 223.016 bits (567), Expect = 4.859e-70 Identity = 140/323 (43.34%), Postives = 197/323 (60.99%), Query Frame = 3 Query: 96 FLLILIVLQIWTCHSKPDK-DNLL--------KDVKENVNKAVKDVNNIFKQEKSNIKYSSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQ--SKLLITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDP 1031 +++L I ++PD DN + DV+ ++N+ D++++ ++ K ++ FI F ASI VI+++ELGDKTFFIA IM++R+PRL+V+ GA+ ALA MTVLS A GMA IP+ TYYIS LFLIFGLKM+ DG Y+M P ++QEE EEVQ +LRKRE E + + L+ D E+G + R + +T F ++ ++F +TFLAEWGDRSQ+TTI+LAA+KDV GVI GG +GH +CTG+AVI GR +A KI VR +T +GGI F+ FA++ P Sbjct: 30 LMVVLTFGTICAAEAQPDSADNAVIESGIQSNLDVQGDLNRPT-DLSSLAEKPKDAADRPKTKGTFIDAFTASISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAIAALALMTVLSCAFGMAANFIPKIYTYYISTALFLIFGLKMLYDG-------YKMKPTDAQEELEEVQTDLRKREDELDRDVNAALVNDAESG--------------RRRPQKRGATYFTM----------RILAQAFTMTFLAEWGDRSQLTTIILAASKDVYGVIAGGIIGHCICTGLAVIGGRLVASKISVRTVTIVGGIVFIGFAIYAVAIPP 320
BLAST of GDT1 family protein vs. Ensembl Fly
Match: CG42542 (gene:FBgn0260659 transcript:FBtr0301101) HSP 1 Score: 223.016 bits (567), Expect = 4.859e-70 Identity = 140/323 (43.34%), Postives = 197/323 (60.99%), Query Frame = 3 Query: 96 FLLILIVLQIWTCHSKPDK-DNLL--------KDVKENVNKAVKDVNNIFKQEKSNIKYSSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQ--SKLLITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDP 1031 +++L I ++PD DN + DV+ ++N+ D++++ ++ K ++ FI F ASI VI+++ELGDKTFFIA IM++R+PRL+V+ GA+ ALA MTVLS A GMA IP+ TYYIS LFLIFGLKM+ DG Y+M P ++QEE EEVQ +LRKRE E + + L+ D E+G + R + +T F ++ ++F +TFLAEWGDRSQ+TTI+LAA+KDV GVI GG +GH +CTG+AVI GR +A KI VR +T +GGI F+ FA++ P Sbjct: 30 LMVVLTFGTICAAEAQPDSADNAVIESGIQSNLDVQGDLNRPT-DLSSLAEKPKDAADRPKTKGTFIDAFTASISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAIAALALMTVLSCAFGMAANFIPKIYTYYISTALFLIFGLKMLYDG-------YKMKPTDAQEELEEVQTDLRKREDELDRDVNAALVNDAESG--------------RRRPQKRGATYFTM----------RILAQAFTMTFLAEWGDRSQLTTIILAASKDVYGVIAGGIIGHCICTGLAVIGGRLVASKISVRTVTIVGGIVFIGFAIYAVAIPP 320
BLAST of GDT1 family protein vs. Ensembl Fly
Match: CG42542 (gene:FBgn0260659 transcript:FBtr0301103) HSP 1 Score: 124.405 bits (311), Expect = 3.481e-31 Identity = 74/172 (43.02%), Postives = 109/172 (63.37%), Query Frame = 3 Query: 60 KYLIFLK--MKSCIFLLILIVLQIWT---CHSKPDK-DNLL--------KDVKENVNKAVKDVNNIFKQEKSNIKYSSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIK 533 ++ ++LK K + L +++VL T ++PD DN + DV+ ++N+ D++++ ++ K ++ FI F ASI VI+++ELGDKTFFIA IM++R+PRL+V+ GA+ ALA MTVLS A GMA IP+ TYYIS LFLIFGLKM+ DG +K Sbjct: 13 RHNVYLKRSAKWHMALALMVVLTFGTICAAEAQPDSADNAVIESGIQSNLDVQGDLNRPT-DLSSLAEKPKDAADRPKTKGTFIDAFTASISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAIAALALMTVLSCAFGMAANFIPKIYTYYISTALFLIFGLKMLYDGYKMK 183 HSP 2 Score: 115.546 bits (288), Expect = 4.280e-28 Identity = 52/98 (53.06%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 741 RVQRALYVIFS-KVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDP 1031 R Q+ F+ ++ ++F +TFLAEWGDRSQ+TTI+LAA+KDV GVI GG +GH +CTG+AVI GR +A KI VR +T +GGI F+ FA++ P Sbjct: 403 RPQKRGATYFTMRILAQAFTMTFLAEWGDRSQLTTIILAASKDVYGVIAGGIIGHCICTGLAVIGGRLVASKISVRTVTIVGGIVFIGFAIYAVAIPP 500
BLAST of GDT1 family protein vs. Ensembl Fly
Match: CG42542 (gene:FBgn0260659 transcript:FBtr0301104) HSP 1 Score: 124.405 bits (311), Expect = 3.481e-31 Identity = 74/172 (43.02%), Postives = 109/172 (63.37%), Query Frame = 3 Query: 60 KYLIFLK--MKSCIFLLILIVLQIWT---CHSKPDK-DNLL--------KDVKENVNKAVKDVNNIFKQEKSNIKYSSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIK 533 ++ ++LK K + L +++VL T ++PD DN + DV+ ++N+ D++++ ++ K ++ FI F ASI VI+++ELGDKTFFIA IM++R+PRL+V+ GA+ ALA MTVLS A GMA IP+ TYYIS LFLIFGLKM+ DG +K Sbjct: 13 RHNVYLKRSAKWHMALALMVVLTFGTICAAEAQPDSADNAVIESGIQSNLDVQGDLNRPT-DLSSLAEKPKDAADRPKTKGTFIDAFTASISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAIAALALMTVLSCAFGMAANFIPKIYTYYISTALFLIFGLKMLYDGYKMK 183 HSP 2 Score: 115.546 bits (288), Expect = 4.280e-28 Identity = 52/98 (53.06%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 741 RVQRALYVIFS-KVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDP 1031 R Q+ F+ ++ ++F +TFLAEWGDRSQ+TTI+LAA+KDV GVI GG +GH +CTG+AVI GR +A KI VR +T +GGI F+ FA++ P Sbjct: 403 RPQKRGATYFTMRILAQAFTMTFLAEWGDRSQLTTIILAASKDVYGVIAGGIIGHCICTGLAVIGGRLVASKISVRTVTIVGGIVFIGFAIYAVAIPP 500
BLAST of GDT1 family protein vs. Ensembl Zebrafish
Match: tmem165 (transmembrane protein 165 [Source:ZFIN;Acc:ZDB-GENE-030131-3222]) HSP 1 Score: 221.861 bits (564), Expect = 1.050e-69 Identity = 143/333 (42.94%), Postives = 188/333 (56.46%), Query Frame = 3 Query: 48 HNSYKYLIFLKMKSCIFLLILIVLQIWTCHSKPDKDNLLKDVKENVNKAVKD--VNNIFKQEKSNIKYSSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKLLITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDPLSN 1040 H +++ FL LL +++ ++ +K + ++ V K D + ++ N LGFIH F A+I VII+SELGDKTFFIA IM++R RL V AGAMLAL MT LS G ATT+IPR TYYIS LF IFG++M+++GL + + E QEE EEVQAE++K++ E + KL P+ + +P QR + S +F+++ LTFLAEWGDRSQ+ TIVLAA +D GV VGGTLGH LCTG+AVI GR +AQKI VR +T IGGI FL FA P S Sbjct: 9 HGGGRFICFL------VLLSVVLFSAGVTATQEEKKVINEEQPAEVQKGTTDHAPGPAIRVDEPN----KGNLGFIHAFAAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFGYATTIIPRIYTYYISTALFAIFGVRMLREGLRMSPD-------EGQEELEEVQAEIKKKDEELQRYKLANGAPDVEAGTAANMLP--------------------QRKWPSLISPIFIQALTLTFLAEWGDRSQLATIVLAAREDPFGVAVGGTLGHCLCTGLAVIGGRMVAQKISVRTVTIIGGIVFLAFAFSALFIKPDSG 304
BLAST of GDT1 family protein vs. Ensembl Xenopus
Match: grm1 (glutamate receptor, metabotropic 1 [Source:Xenbase;Acc:XB-GENE-980107]) HSP 1 Score: 123.25 bits (308), Expect = 1.002e-33 Identity = 66/106 (62.26%), Postives = 79/106 (74.53%), Query Frame = 3 Query: 228 KSNIKYSSS-RLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNP 542 SN + SS+ LGFIH F+A+I VII+SELGDKTFFIA IM++R RL V AGAMLAL MT LS G ATTVIPR TYY+S LF IFGL+M+++GL K +P Sbjct: 10 SSNTELSSTANLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFGYATTVIPRVYTYYVSTALFAIFGLRMLREGL--KMSP 113
BLAST of GDT1 family protein vs. Ensembl Mouse
Match: Tmem165 (transmembrane protein 165 [Source:MGI Symbol;Acc:MGI:894407]) HSP 1 Score: 209.92 bits (533), Expect = 8.371e-65 Identity = 140/266 (52.63%), Postives = 171/266 (64.29%), Query Frame = 3 Query: 246 SSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKLLI-TDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDPLSN 1040 + + LGFIH F+A+I VII+SELGDKTFFIA IM++R RL V AGAMLALA MT LS G ATTVIPR TYY+S LF IFG++M+++GL + + E QEE EEVQAEL+K++ EF ++KLL D ETG + + Q+ S +FV++ LTFLAEWGDRSQ+TTIVLAA +D GV VGGT+GH LCTG+AVI GR IAQKI VR +T IGGI FL FA P S Sbjct: 87 AQTNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFGYATTVIPRVYTYYVSTALFAIFGIRMLREGLKMSPD-------EGQEELEEVQAELKKKDEEFQRTKLLNGPDVETGTSTAIP-----------------------QKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISPESG 322
BLAST of GDT1 family protein vs. Ensembl Mouse
Match: Tmem165 (transmembrane protein 165 [Source:MGI Symbol;Acc:MGI:894407]) HSP 1 Score: 56.6102 bits (135), Expect = 6.493e-10 Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 3 Query: 345 MSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKL 635 M++R RL V AGAMLALA MT LS G ATTVIPR TYY+S LF IFG++M+++GL K +P E QEE EEVQAEL+K++ EF ++KL Sbjct: 1 MAMRYNRLTVLAGAMLALALMTCLSVLFGYATTVIPRVYTYYVSTALFAIFGIRMLREGL--KMSP-----DEGQEELEEVQAELKKKDEEFQRTKL 90
BLAST of GDT1 family protein vs. UniProt/SwissProt
Match: sp|Q9HC07|TM165_HUMAN (Transmembrane protein 165 OS=Homo sapiens OX=9606 GN=TMEM165 PE=1 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 9.056e-70 Identity = 141/267 (52.81%), Postives = 171/267 (64.04%), Query Frame = 3 Query: 246 SSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKLL--ITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDPLSN 1040 + + LGFIH F+A+I VII+SELGDKTFFIA IM++R RL V AGAMLAL MT LS G ATTVIPR TYY+S LF IFG++M+++GL + + E QEE EEVQAEL+K++ EF ++KLL D ETG S+ P Q+ S +FV++ LTFLAEWGDRSQ+TTIVLAA +D GV VGGT+GH LCTG+AVI GR IAQKI VR +T IGGI FL FA P S Sbjct: 87 TQTNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFGYATTVIPRVYTYYVSTVLFAIFGIRMLREGLKMSPD-------EGQEELEEVQAELKKKDEEFQRTKLLNGPGDVETGT-SITVP----------------------QKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISPDSG 323
BLAST of GDT1 family protein vs. UniProt/SwissProt
Match: sp|P52875|TM165_MOUSE (Transmembrane protein 165 OS=Mus musculus OX=10090 GN=Tmem165 PE=1 SV=2) HSP 1 Score: 209.92 bits (533), Expect = 5.855e-64 Identity = 140/266 (52.63%), Postives = 171/266 (64.29%), Query Frame = 3 Query: 246 SSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKLLI-TDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDPLSN 1040 + + LGFIH F+A+I VII+SELGDKTFFIA IM++R RL V AGAMLALA MT LS G ATTVIPR TYY+S LF IFG++M+++GL + + E QEE EEVQAEL+K++ EF ++KLL D ETG + + Q+ S +FV++ LTFLAEWGDRSQ+TTIVLAA +D GV VGGT+GH LCTG+AVI GR IAQKI VR +T IGGI FL FA P S Sbjct: 87 AQTNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFGYATTVIPRVYTYYVSTALFAIFGIRMLREGLKMSPD-------EGQEELEEVQAELKKKDEEFQRTKLLNGPDVETGTSTAIP-----------------------QKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISPESG 322
BLAST of GDT1 family protein vs. UniProt/SwissProt
Match: sp|Q4V899|TM165_RAT (Transmembrane protein 165 OS=Rattus norvegicus OX=10116 GN=Tmem165 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 8.900e-64 Identity = 140/266 (52.63%), Postives = 171/266 (64.29%), Query Frame = 3 Query: 246 SSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKLLI-TDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDPLSN 1040 + + LGFIH F+A+I VII+SELGDKTFFIA IM++R RL V AGAMLALA MT LS G ATTVIPR TYY+S LF IFG++M+++GL + + E QEE EEVQAEL+K++ EF ++KLL D ETG + + Q+ S +FV++ LTFLAEWGDRSQ+TTIVLAA +D GV VGGT+GH LCTG+AVI GR IAQKI VR +T IGGI FL FA P S Sbjct: 87 TQANLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFGYATTVIPRVYTYYVSTALFAIFGIRMLREGLKMSPD-------EGQEELEEVQAELKKKDEEFQRTKLLNGPDVETGTSTAIP-----------------------QKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISPESG 322
BLAST of GDT1 family protein vs. UniProt/SwissProt
Match: sp|Q10320|YD68_SCHPO (GDT1-like protein C17G8.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17G8.08c PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 2.376e-40 Identity = 91/283 (32.16%), Postives = 152/283 (53.71%), Query Frame = 3 Query: 174 KENVNKAVKDVNNIFKQEKSNIKYSSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVI-PRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFS--QSKLLITDPETGVMSVVKPIPSPASDKYRVTEFISTKF-NRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAV 1010 K+ V + + DV+ I E+ + + F+ + SI +I E+GDKTF +A +++ N RL V+AG+ AL MT+L LG A ++ PRKLT + G LF+IFG+KM+ + + + EF ++++ P ++ + R + ++ ++ + + +FS +F+++F LTF++EWGDRSQ+ TI +AA+ +V GV +G +GHA CT +AVISG++I+ KI V + FIGGI F+ F + Sbjct: 20 KKIVGEGMADVSAIKHPEEVH----PTNRDFLRSLIFSISMIFGCEIGDKTFIVAALLAFENSRLTVFAGSYSALFIMTLLGVLLGHAAPLLFPRKLTDILGGVLFVIFGIKMLMEAKEVMDSK-------------------ESMSDEFQNVRNEIAANGPIDQLLEEGAAPSHYTGHRSRSGHTLMSQLKSKGRNVMATLFSPLFIKAFALTFVSEWGDRSQIATIAMAASDNVYGVFMGANVGHACCTALAVISGKYISTKIKVHKVMFIGGILFIAFGL 279
BLAST of GDT1 family protein vs. UniProt/SwissProt
Match: sp|P52876|Y615_SYNY3 (GDT1-like protein sll0615 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll0615 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.605e-36 Identity = 90/248 (36.29%), Postives = 124/248 (50.00%), Query Frame = 3 Query: 276 FLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKLLITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTF 1019 F A + +I +SELGDKTFFIA+I+++R PR V G + LA+MT+LS +G T +P + Y LFLIFG K++ D IK E E D E + S K K V R ++ VESF LTF+AEWGDR+Q+ TI LAA+ + GV G LGH +C IAV+ G+F+A +I + +T IGG+ F +FAV ++ Sbjct: 5 FTAGLLLITVSELGDKTFFIAMILAMRYPRRWVLVGVVGGLAAMTILSVLMGQIFTFLPTRYINYAEVALFLIFGTKLLWDARRIKATA-------------------NLEEME---------DAEKAIASGEK------------------KLKIVPRGWGIV-----VESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAVIAVMGGKFVAGRISEKTVTLIGGLLFYLFAVVSW 201
BLAST of GDT1 family protein vs. TrEMBL
Match: A0A267EAV8 (GDT1 family protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig025780g1 PE=3 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 1.677e-84 Identity = 159/308 (51.62%), Postives = 207/308 (67.21%), Query Frame = 3 Query: 138 SKPDKDNLLKDVK---ENVNKAVKDVNNIFKQEKS-NIKYSSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEF--SQSKLLITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDPLSNS 1043 +KP+ + L + K +N KA + K + S ++ S+SR GFIH F+AS+ VII+SELGDKTFFIA IM++R+ RL+V+AGA+LALA+MT+LSA LG ATTVIPR TYY+S LF IFGLKM+++G ++K + EEYEEVQA+L+KR+ E+ SQ+ + D ETGV I SP + +Y +KV +ESF LTFLAEWGDRSQ+ TI+LAA DVVGVIVGGTLGHALCTG+AV+ GRFIAQ+I VR +T GG+ FL+FA+ + P SNS Sbjct: 47 TKPEDSSFLHNFKNKIKNAMKANEKAERYLKGDSSATVESSASRFGFIHAFVASLSVIIVSELGDKTFFIAAIMAMRHSRLIVFAGAILALATMTILSAVLGYATTVIPRWFTYYVSSALFAIFGLKMLREGYYMKPDE-------GMEEYEEVQADLKKRDEEYCKSQTASVEQDMETGV------IRSPR-----------------RSIIYSFVNKVLIESFSLTFLAEWGDRSQIATIILAARDDVVGVIVGGTLGHALCTGLAVLGGRFIAQRISVRTVTLCGGVIFLLFAMSALVIGPESNS 324
BLAST of GDT1 family protein vs. TrEMBL
Match: A0A267G383 (GDT1 family protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig031712g1 PE=3 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 1.770e-84 Identity = 159/308 (51.62%), Postives = 207/308 (67.21%), Query Frame = 3 Query: 138 SKPDKDNLLKDVK---ENVNKAVKDVNNIFKQEKS-NIKYSSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEF--SQSKLLITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDPLSNS 1043 +KP+ + L + K +N KA + K + S ++ S+SR GFIH F+AS+ VII+SELGDKTFFIA IM++R+ RL+V+AGA+LALA+MT+LSA LG ATTVIPR TYY+S LF IFGLKM+++G ++K + EEYEEVQA+L+KR+ E+ SQ+ + D ETGV I SP + +Y +KV +ESF LTFLAEWGDRSQ+ TI+LAA DVVGVIVGGTLGHALCTG+AV+ GRFIAQ+I VR +T GG+ FL+FA+ + P SNS Sbjct: 47 TKPEDSSFLHNFKNKIKNAMKANEKAERYLKGDSSATVESSASRFGFIHAFVASLSVIIVSELGDKTFFIAAIMAMRHSRLIVFAGAILALATMTILSAVLGYATTVIPRWFTYYVSSALFAIFGLKMLREGYYMKPDE-------GMEEYEEVQADLKKRDEEYCKSQTASVEQDMETGV------IRSPR-----------------RSIIYSFVNKVLIESFSLTFLAEWGDRSQIATIILAARDDVVGVIVGGTLGHALCTGLAVLGGRFIAQRISVRTVTLCGGVIFLLFAMSALVIGPESNS 324
BLAST of GDT1 family protein vs. TrEMBL
Match: A0A3R7GW60 (GDT1 family protein (Fragment) OS=Clonorchis sinensis OX=79923 GN=TMEM165 PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 3.230e-79 Identity = 134/260 (51.54%), Postives = 171/260 (65.77%), Query Frame = 3 Query: 264 FIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKLLITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDPLSNS 1043 F GF AS+YVIIISELGDKTFFIA IMS+++PR +VYAGAM AL +MTVLSA LG ATTVIPR T+Y+SG LFL+FG+KM+ D + + E+ + KL + + + + K S +S+ V+ + IFS + E+F+LTFLAEWGDRSQ+TTIVLAATK V GVIVGG LGHA+CTG+AV+ GRF+AQ+IPV+ LT+IGG TFL+F + TF+ DP SNS Sbjct: 69 FFRGFTASLYVIIISELGDKTFFIAAIMSMQHPRCLVYAGAMCALGTMTVLSAILGYATTVIPRSFTFYLSGVLFLLFGMKMIYDAYQMSPT---------------------DTQDEYEEVKLQLAQSNSTDLEMGKTDSSQ----------LSSTRETVRYTMKRIFSPILAEAFILTFLAEWGDRSQLTTIVLAATKSVSGVIVGGILGHAVCTGLAVLVGRFVAQRIPVKWLTYIGGTTFLLFGIFTFLGDPDSNS 297
BLAST of GDT1 family protein vs. TrEMBL
Match: A0A2J7PCF2 (GDT1 family protein OS=Cryptotermes secundus OX=105785 GN=TMEM165_3 PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 6.325e-79 Identity = 143/280 (51.07%), Postives = 188/280 (67.14%), Query Frame = 3 Query: 201 DVNNIFKQEKSNIKYSSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQ--SKLLITDPETGVM-SVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDP 1031 D+N+ K E+ S LGFIH F+AS+ VII+SELGDKTFFIA IM++R+PRL V+ GA+ AL MT+LS G A T+IPR TYYIS LF IFGLKM+K+G ++ N +QEE+EEVQ++LRKRE E+ + S L+ DPE+GV+ VKP + + + S++F+++F LTFLAEWGDRSQ+TT++LA +DV+GV VGG LGHALCTG+AV+ GRFIAQKI VR +T IGG+ FL+FA+ DP Sbjct: 61 DINSGNKNEQK------SNLGFIHAFIASVSVIIVSELGDKTFFIAAIMAMRHPRLTVFVGAITALGLMTILSVVFGWAATIIPRAYTYYISTALFAIFGLKMLKEGYYMSANE-------AQEEFEEVQSDLRKREDEYEKEASASLVQDPESGVIRKSVKP----------------------AKTILSLISRIFIQAFTLTFLAEWGDRSQLTTMILATREDVIGVTVGGILGHALCTGLAVVGGRFIAQKISVRTVTLIGGVVFLLFAITALFFDP 305
BLAST of GDT1 family protein vs. TrEMBL
Match: A0A2P8Y7Q0 (GDT1 family protein OS=Blattella germanica OX=6973 GN=TMEM165 PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 6.477e-79 Identity = 147/320 (45.94%), Postives = 208/320 (65.00%), Query Frame = 3 Query: 81 MKSCIFLLILIVLQIWTCHSKPDKDNLLKDV-KENVNKAVKDVNNIFKQEKSNIKYSSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKL--LITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDP 1031 +K +F+L++IVL + ++ +K+ + +V K + +V+ + + N + + S LGFIH F+AS+ VI++SELGDKTFFIA IM++R+PRL V+ GA+ ALA MTVLS A G TVIPR TYYIS LF +FGLKM+K+G ++ N QEE+EEVQ +LRKR+ E+ + L+ DPE+G++ K + + + + S++F+++F LTF+AEWGDRSQ+TTI+L A +DVVGV +GGTLGHALCTG+AV+ GR IAQKI VR +T IGG+ FL+FAV DP Sbjct: 13 LKRFVFVLLIIVL--FLSFTEAEKEPIEAEVLKSDDPPSVRGHSERIEINTENGEETKSNLGFIHAFVASLSVIVVSELGDKTFFIAAIMAMRHPRLTVFLGALSALALMTVLSVAFGWIATVIPRVYTYYISTALFALFGLKMLKEGYYMSPNE-------GQEEFEEVQLDLRKRDDEYEKEATTSLVQDPESGIIR---------------------KSAKTAQPILSLISRIFIQAFTLTFVAEWGDRSQLTTILLGAREDVVGVTIGGTLGHALCTGLAVLGGRMIAQKISVRTVTLIGGVVFLVFAVTALFFDP 302
BLAST of GDT1 family protein vs. Ensembl Cavefish
Match: tmem165 (transmembrane protein 165 [Source:NCBI gene;Acc:103045178]) HSP 1 Score: 227.639 bits (579), Expect = 4.348e-72 Identity = 137/297 (46.13%), Postives = 182/297 (61.28%), Query Frame = 3 Query: 147 DKDNLLKDVKENVNKAV--KDVNNIFKQEKSNIKYSSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKLLITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDP 1031 ++ + +D +++V KA + Q+++ S + LGFIH F+A+I VII+SELGDKTFFIA IM++R RL V AGAMLAL MT LS G ATT+IPR TYYIS LF IFG++M+++GL + + QEE EEVQAE++K++ E + KL P+ + V +P QR + + S +F+++ LTFLAEWGDRSQ+ TIVLAA +D GV VGGTLGH LCTG+AV+ GR +AQKI VR +T IGGI FL FA P Sbjct: 34 EEKRVNEDPQQHVEKAATGQPAGPAVSQDET----SKANLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFGYATTIIPRIYTYYISTALFAIFGVRMLREGLRMSADE-------GQEELEEVQAEIKKKDEELQRYKLANGAPDVETGAAVTMLP--------------------QRKWHSVISPIFIQALTLTFLAEWGDRSQLATIVLAAREDPFGVAVGGTLGHCLCTGLAVVGGRMVAQKISVRTVTIIGGIVFLAFAFSALFIKP 299
BLAST of GDT1 family protein vs. Ensembl Yeast
Match: GDT1 (Calcium transporter localized to the cis- and medial-Golgi apparatus; required for protein glycosylation; GFP-fusion protein localizes to the vacuole; TMEM165, a human gene which causes Congenital Disorders of Glycosylation is orthologous and functionally complements the null allele; expression pattern and physical interactions suggest a possible role in ribosome biogenesis; expression reduced in a gcr1 null mutant [Source:SGD;Acc:S000000391]) HSP 1 Score: 133.265 bits (334), Expect = 5.880e-37 Identity = 87/257 (33.85%), Postives = 139/257 (54.09%), Query Frame = 3 Query: 246 SSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGM-ATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKLLITDPETGVMSVVKPIPSPASDKYRVTEFISTKF-NRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAV 1010 SSS L FL S+ +I +SE+GDKTF IA +M++R+ R++V++ A +LA MT+LS +G A + + T + +G LFL+FG K+ +GL + K+ + EE ++ + + D E G A DK I K +R++ +FS V+V+ F++ FL E GDRSQ++ I +A D VI G +GHA+C+G+AV+ G+ +A +I +R +T + F IFA+ Sbjct: 35 SSSHL---KSFLMSVSMIGLSEIGDKTFLIAALMAMRHKRVLVFSAAATSLAIMTILSGVVGHSAVAFLSERYTAFFAGILFLVFGYKLTMEGLEMSKDAGVEEEMAEVEEEIAIKDMNQDMD-----------DVEKG--------GDTAYDKQLKNASIGKKIVHRIRELASFMFSPVWVQIFLMVFLGELGDRSQISIIAMATDSDYWYVIAGAVIGHAICSGLAVVGGKLLATRISIRTITLASSLLFFIFAL 269
BLAST of GDT1 family protein vs. Ensembl Nematostella
Match: EDO28717 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T5P3]) HSP 1 Score: 242.662 bits (618), Expect = 2.616e-79 Identity = 145/252 (57.54%), Postives = 179/252 (71.03%), Query Frame = 3 Query: 264 FIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKLLITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTF 1019 FIHGF A+I +II+SELGDKTFFIA IMS+R+ RLVV++GAM+AL MT+LSA LG ATTVIPRK T YIS LF+ FGLKM+K+G YEM P E QEE EEVQAEL+K+E+E + ++ DPETGV+ K S F ++ I S + ++SF LTFLAEWGDRSQ+ TI+L A ++V+GVI+GGTLGH LCTG+AV+ GRFIAQKI VR +T +GGI FLIFAV F Sbjct: 1 FIHGFAAAISMIIVSELGDKTFFIAAIMSMRHSRLVVFSGAMMALGFMTILSAVLGYATTVIPRKFTLYISTALFVFFGLKMLKEG-------YEMDPSEGQEELEEVQAELKKKEAELEKQEMATQDPETGVIRGGKK---------------SLSF------VHNICSTILLQSFTLTFLAEWGDRSQLATILLGARENVIGVILGGTLGHGLCTGLAVVGGRFIAQKISVRTVTILGGIVFLIFAVSAF 224
BLAST of GDT1 family protein vs. Ensembl Medaka
Match: tmem165 (transmembrane protein 165 [Source:NCBI gene;Acc:101162916]) HSP 1 Score: 216.853 bits (551), Expect = 7.703e-68 Identity = 137/299 (45.82%), Postives = 178/299 (59.53%), Query Frame = 3 Query: 192 AVKDVNNIFKQEKSNIKYSSSR-----------------LGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKLL--ITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDP 1031 A+++ + F++ K S++R LGFIH F+AS VII+SELGDKTFFIA IM++R RL V GA+LALA MT LS G A T+IPR TYY+S LF IFG++M+++GL K +P E QEE EEVQAE++K++ E +SKL D E G T Q Y + S +F+++F L+FLAEWGDRSQ+TTI+LAA ++ GV VGGT+GH LCTG+AVI GR IAQ+I VR +T IGGI FL FA+ P Sbjct: 34 AIQEESKTFQEHNQQEKASTARPAEPAVVEDQDGSSKANLGFIHAFVASFSVIIVSELGDKTFFIAAIMAMRYNRLTVLTGAILALAIMTCLSVLFGYAATIIPRIYTYYVSTALFAIFGVRMLREGL--KMSP-----DEGQEELEEVQAEIKKKDEELQRSKLANGTADLEAG-----------------------TGITLPQTKWYSLCSPIFIQAFTLSFLAEWGDRSQLTTIILAARENPFGVAVGGTVGHCLCTGLAVIGGRMIAQRISVRTVTIIGGIVFLAFAISALFIKP 302
BLAST of GDT1 family protein vs. Planmine SMEST
Match: SMESG000008670.1 (SMESG000008670.1) HSP 1 Score: 583.948 bits (1504), Expect = 0.000e+0 Identity = 311/321 (96.88%), Postives = 312/321 (97.20%), Query Frame = 3 Query: 81 MKSCIFLLILIVLQIWTCHSKPDKDNLLKDVKENVNKAVKDVNNIFKQEKSNIKYSSSRLGFIHGFLASIYVIIISELGDKTFFIAVIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDGLWIKKNPYXXXXXXXXXXXXXXXXXXRKRESEFSQSKLLITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDPLSNS 1043 MKSCIFLLILIVLQIWTCHSKPDKDNLLKDVKEN+NKAVKDVNNIFKQEKSNIKYSSSRLGFIHGFLASIYVIIISELGDKTFFIA IMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKD YEMSPLESQEEYEEVQAELRKRESEFSQSKLLITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDPLSNS Sbjct: 1 MKSCIFLLILIVLQIWTCHSKPDKDNLLKDVKENINKAVKDVNNIFKQEKSNIKYSSSRLGFIHGFLASIYVIIISELGDKTFFIAAIMSIRNPRLVVYAGAMLALASMTVLSAALGMATTVIPRKLTYYISGFLFLIFGLKMMKDA-------YEMSPLESQEEYEEVQAELRKRESEFSQSKLLITDPETGVMSVVKPIPSPASDKYRVTEFISTKFNRVQRALYVIFSKVFVESFVLTFLAEWGDRSQMTTIVLAATKDVVGVIVGGTLGHALCTGIAVISGRFIAQKIPVRALTFIGGITFLIFAVHTFISDPLSNS 314 The following BLAST results are available for this feature:
BLAST of GDT1 family protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 3
BLAST of GDT1 family protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of GDT1 family protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of GDT1 family protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 1
BLAST of GDT1 family protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of GDT1 family protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 2
BLAST of GDT1 family protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of GDT1 family protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of GDT1 family protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of GDT1 family protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of GDT1 family protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of GDT1 family protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of GDT1 family protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 1
BLAST of GDT1 family protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30018827 ID=SMED30018827|Name=GDT1 family protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1118bpback to top protein sequence of SMED30018827-orf-1 >SMED30018827-orf-1 ID=SMED30018827-orf-1|Name=SMED30018827-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=322bp MKSCIFLLILIVLQIWTCHSKPDKDNLLKDVKENVNKAVKDVNNIFKQEKback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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