SMED30018802

Overview
NameSMED30018802
Smed IDSMED30018802
Length (bp)1018
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30018802 (SMED30018802) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30018802 (SMED30018802) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30018802 (SMED30018802) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30018802 (SMED30018802) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30018802

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 4

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30018802SMESG000030480.1 dd_Smed_v4_2310_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
whole organism asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30018802SMESG000030480.1 dd_Smed_v4_2310_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
whole organism asexual adult single-cell RNA-sequencing evidence
epidermisSMED30018802SMESG000030480.1 dd_Smed_v4_2310_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult single-cell RNA-sequencing evidence
dorsal region of the epidermisSMED30018802SMESG000030480.1 dd_Smed_v4_2310_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of SMED30018802 vs. TrEMBL
Match: A0A2U8U4E6 (HSP27 OS=Dugesia japonica OX=6161 GN=hsp27 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.793e-14
Identity = 63/226 (27.88%), Postives = 115/226 (50.88%), Query Frame = 1
Query:  154 PNETDS-RMPSSVDRMRIIRYERNENSEVEFKFIIDLGDFTPEEIGINQTGYQVAISGS--------RVVLPGSLRKSKEFYEVVSLPKNADMGKDLEAQFNPDGNLIIKIQIVPRLFSS-------STYV--TPKQKFDRCP--LIEDEKTFFVEQVIVDQEFRDADIKVNVDGNIINIFAAIETKNDNGDIIVKEYHEECRLPPHINPDDLRADYMNGVLALNA 771
            PNE +  R  +   R+   R ERN+  + E+   ID+ DF  EEI + Q  + + I  S              S  + KE+++ + LP   D+ K +E  +  DG LIIKI  + +  SS        +Y+  +P++K    P  L+ + K  + E++ +D +F   DIK+N +G +I + A  +  + NG +  + Y+ E + P +++ + ++AD+ +G L ++A
Sbjct:   14 PNEAEYVRCSTPNQRLGSPRLERNDQGDEEYTVEIDVRDFRAEEIKVKQNDHTLIIDASCSKTSKTCEESSSCSRSEKKEYHKTILLPPYVDLSKKMETIYT-DGKLIIKIPALHQPHSSIPGSAQIRSYLSQSPREKHS-VPEALMRNGKNVYSEKLKLDPDFTKDDIKINTNGQLIIVNATQKRIDPNGCVSTRNYNSEHKFPANVDLEQIQADWCDGELLISA 237          
BLAST of SMED30018802 vs. TrEMBL
Match: A0A4Z2CMP3 (Major egg antigen isoform 1 OS=Schistosoma japonicum OX=6182 GN=EWB00_009261 PE=3 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 7.764e-7
Identity = 51/219 (23.29%), Postives = 101/219 (46.12%), Query Frame = 1
Query:  211 YERNENSEVEFKFIIDLGDFTPEEIGINQTGYQVAISGSRVVLPGSLRKSKEFYEVVSLPKNADMGKDLEAQFNPDGNLII------------------KIQIVPRLFSSSTYVTPKQ----KFDRCPLIEDE----KTFFVEQVIVDQEFRDADIKVNVDGNIINIFAAIETKNDNGDIIVK------EYHEECRLPPHINPDDLRADYMNGVLALNA 771
            YE  ++ +V FK   D+  F+PE+I ++ T  +V +   +V   G+ + S++F  ++ LP++ +  K L+ +   DG LI+                  ++ I P  ++ S +VTP +    K    P I DE    K   VE + +D  ++  D+ ++VD + I + +   +K+D+     K      E+     +P  ++P  + +  +   L + A
Sbjct:   34 YEVGKDGKVHFKVRFDVKGFSPEDINVSTTDNRVVVCAKKVTETGTSKSSRQFCRMIELPQSIEQTK-LDCRLTNDGVLILEAPVKSTEHKSVTFNDKRQLAIRPTSYTQSGHVTPSKALVVKGVTGPTIIDEGFKGKRLHVE-IPIDPMYKSEDLCIHVDPDRI-VVSGRRSKSDSHSASWKKNTPCAEFSHSYDIPHRVDPSSVTSQLVGNTLVIEA 249          
BLAST of SMED30018802 vs. TrEMBL
Match: A0A4Z2CMF6 (Major egg antigen isoform 2 OS=Schistosoma japonicum OX=6182 GN=EWB00_009261 PE=3 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 2.406e-6
Identity = 54/235 (22.98%), Postives = 107/235 (45.53%), Query Frame = 1
Query:  163 TDSRMPSSVDRMRIIRYERNENSEVEFKFIIDLGDFTPEEIGINQTGYQVAISGSRVVLPGSLRKSKEFYEVVSLPKNADMGKDLEAQFNPDGNLII------------------KIQIVPRLFSSSTYVTPKQ----KFDRCPLIEDE----KTFFVEQVIVDQEFRDADIKVNVDGNIINIFAAIETKNDNGDIIVK------EYHEECRLPPHINPDDLRADYMNGVLALNA 771
            TD+    S++      YE  ++ +V FK   D+  F+PE+I ++ T  +V +   +V   G+ + S++F  ++ LP++ +  K L+ +   DG LI+                  ++ I P  ++ S +VTP +    K    P I DE    K   VE + +D  ++  D+ ++VD + I + +   +K+D+     K      E+     +P  ++P  + +  +   L + A
Sbjct:  116 TDAPFTGSLNDFLKDAYEVGKDGKVHFKVRFDVKGFSPEDINVSTTDNRVVVCAKKVTETGTSKSSRQFCRMIELPQSIEQTK-LDCRLTNDGVLILEAPVKSTEHKSVTFNDKRQLAIRPTSYTQSGHVTPSKALVVKGVTGPTIIDEGFKGKRLHVE-IPIDPMYKSEDLCIHVDPDRI-VVSGRRSKSDSHSASWKKNTPCAEFSHSYDIPHRVDPSSVTSQLVGNTLVIEA 347          
BLAST of SMED30018802 vs. TrEMBL
Match: A0A183X259 (Uncharacterized protein OS=Trichobilharzia regenti OX=157069 GN=TRE_LOCUS18464 PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 3.109e-6
Identity = 55/214 (25.70%), Postives = 91/214 (42.52%), Query Frame = 1
Query:  211 YERNENSEVEFKFIIDLGDFTPEEIGINQTGYQVAISGSRVVLPGSLRKSKEFYEVVSLPKNADMGKDLEAQFNPDGNLIIKIQIVPRLFSSSTYVTPKQ------------------KFDRCPLI-EDE---KTFFVEQVIVDQEFRDADIKVNVDGNIINIFAAIETKNDN-----GDIIVKEYHEECRLPPHINPDDLRADYMNGVLALNA 771
            YE  E+ ++ FK   D+  F P++I +N T  +V +   +V    S + S+EF  V+ LP+  D    L+ +   DG L+++  +    + S T+   +Q                  K    PLI EDE   K   VE V VD  ++  D+ +NVD N + +       +DN           E+     +P  ++P  + A  +   L L A
Sbjct:  135 YELGEDGKLHFKVHFDVKGFEPDDIKVNSTENRVNVHAKKVTESDSSKSSREFCRVIELPRTID-NSHLQCRLTDDGVLMLEAPVKSPDYESITFTDNRQLGIHPKSTDQVQSKPLVVKGVSGPLILEDEGNRKLLHVE-VPVDPIYKSEDLCINVDSNRVVVSGRCHKTDDNHSNKKSKTSYAEFTHSYEIPETVDPLSVTAQLIGNRLVLEA 346          
BLAST of SMED30018802 vs. Planmine SMEST
Match: SMESG000030480.1 (SMESG000030480.1)

HSP 1 Score: 493.812 bits (1270), Expect = 2.026e-178
Identity = 240/241 (99.59%), Postives = 240/241 (99.59%), Query Frame = 1
Query:  136 MAAFLKPNETDSRMPSSVDRMRIIRYERNENSEVEFKFIIDLGDFTPEEIGINQTGYQVAISGSRVVLPGSLRKSKEFYEVVSLPKNADMGKDLEAQFNPDGNLIIKIQIVPRLFSSSTYVTPKQKFDRCPLIEDEKTFFVEQVIVDQEFRDADIKVNVDGNIINIFAAIETKNDNGDIIVKEYHEECRLPPHINPDDLRADYMNGVLALNAICRSGNNSRYGSLRSNRTGMSTLSDVFHY 858
            MAAFLKPNETDSRMPSSVDRMRIIRYERNENSEVEFKFIIDLGDFTPEEIGINQTGYQVAISGSRVVLPGSLRKSKEFYEVVSLPKNADMGKDLEAQFNPDGNLIIKIQIVPRLFSSSTYVTPKQKFDRCPLIEDEKTFFVEQVIVDQEFRDADIKVNVDGNIINIFAAIETKNDNGDIIVKEYHEECRLPPHINPDDLRADYMNGVL LNAICRSGNNSRYGSLRSNRTGMSTLSDVFHY
Sbjct:    1 MAAFLKPNETDSRMPSSVDRMRIIRYERNENSEVEFKFIIDLGDFTPEEIGINQTGYQVAISGSRVVLPGSLRKSKEFYEVVSLPKNADMGKDLEAQFNPDGNLIIKIQIVPRLFSSSTYVTPKQKFDRCPLIEDEKTFFVEQVIVDQEFRDADIKVNVDGNIINIFAAIETKNDNGDIIVKEYHEECRLPPHINPDDLRADYMNGVLTLNAICRSGNNSRYGSLRSNRTGMSTLSDVFHY 241          
BLAST of SMED30018802 vs. Planmine SMEST
Match: SMESG000030472.1 (SMESG000030472.1)

HSP 1 Score: 103.219 bits (256), Expect = 1.157e-25
Identity = 72/226 (31.86%), Postives = 123/226 (54.42%), Query Frame = 1
Query:  154 PNETD-SRMPSSVDRMRIIRYERNENSEVEFKFIIDLGDFTPEEIGINQTGYQVAISGS--------RVVLPGSLRKSKEFYEVVSLPKNADMGKDLEAQFNPDGNLIIKIQIVPRLFSS---STYV------TPKQKFDRCP--LIEDEKTFFVEQVIVDQEFRDADIKVNVDGNIINIFAAIETKNDNGDIIVKEYHEECRLPPHINPDDLRADYMNGVLALNA 771
            P+ET+  R  +   R+   RYERNE  +VE+ + ID+ DF+ EEI I Q  + + I  +              S  + KE+++ + LP+NAD+ K LE  +N DG LIIKI ++P  +SS   S +V      +P+ K    P  LI + K  + E + +D +F   DIK+NV+G  + + A  +  + +G +  + Y+ E + P +++ + ++AD+  G L ++A
Sbjct:   14 PSETEFIRCSTPSQRLSSPRYERNEQGDVEYTYEIDVSDFSAEEIKIKQHDHTLTIDANCSRSSKTCEESSSCSRSEKKEYHKTILLPQNADLTKKLETIYN-DGILIIKIPVIPNPYSSIPGSAHVRSYPSQSPRDKI-IVPEALIRNGKHVYSETLKMDPDFTKDDIKINVNGQTVVVNATQKRVDPHGCVSTRNYNSEHKFPTNVDLEHIQADWCGGELLISA 237          
BLAST of SMED30018802 vs. Planmine SMEST
Match: SMESG000009940.1 (SMESG000009940.1)

HSP 1 Score: 66.2402 bits (160), Expect = 4.494e-12
Identity = 37/100 (37.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query:  208 RYERNENSEVEFKFIIDLGDFTPEEIGINQTGYQVAI------SGSRVVLPGSLRKS--KEFYEVVSLPKNADMGKDLEAQFNPDGNLIIKIQIVPRLFS 483
            RYE++ N +V++ F +D+  F+P +I I+Q G  +AI      SGS+  + G+  +S  KEF + +SLP N DM K++ + +  +G L I+I I+P+ +S
Sbjct:   26 RYEKSTNGDVDYIFTVDVDGFSPSDIRIDQRGNMLAIEAKQSKSGSKKGVHGNTEESEYKEFKKEISLPSNIDMKKEMRSVYTENGLLEIRIPILPQTYS 125          

HSP 2 Score: 53.5286 bits (127), Expect = 6.183e-8
Identity = 29/91 (31.87%), Postives = 54/91 (59.34%), Query Frame = 1
Query:  529 LIEDEKTFFVEQVIVDQEFRDADIKVNVDGNIINIFAAIETKNDNGDIIVKEYHEECRLPPHINPDDLRADYM-NGVLALNAICRSGNNSR 798
            LI D+   +VE++++D  FR  D+ +   G  + I A  E    NG   +KE+++E  LP +++PD+L+A  + NGV+ + A  +S  +++
Sbjct:  196 LITDKSKNYVEEIVIDPIFRPEDLNIKTKGYRVIISAKHEESGPNGYTNMKEFNDEHDLPSNVDPDNLKATLIDNGVVLIEAPYKSTASTK 286          
The following BLAST results are available for this feature:
BLAST of SMED30018802 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30018802 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30018802 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30018802 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30018802 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30018802 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30018802 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30018802 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2U8U4E61.793e-1427.88HSP27 OS=Dugesia japonica OX=6161 GN=hsp27 PE=2 SV... [more]
A0A4Z2CMP37.764e-723.29Major egg antigen isoform 1 OS=Schistosoma japonic... [more]
A0A4Z2CMF62.406e-622.98Major egg antigen isoform 2 OS=Schistosoma japonic... [more]
A0A183X2593.109e-625.70Uncharacterized protein OS=Trichobilharzia regenti... [more]
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BLAST of SMED30018802 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30018802 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30018802 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30018802 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30018802 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30018802 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3
Match NameE-valueIdentityDescription
SMESG000030480.12.026e-17899.59SMESG000030480.1[more]
SMESG000030472.11.157e-2531.86SMESG000030472.1[more]
SMESG000009940.14.494e-1237.00SMESG000009940.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30018802 ID=SMED30018802|Name=SMED30018802|organism=Schmidtea mediterranea sexual|type=transcript|length=1018bp
CACAAATATTTGCACACAGAAAAATATAACAATAATCAATTGTGGTTCTA
AATCTAATATATCTGTGAATTACATCAATTTCTAGCACTAATTTCACATT
ATTGATTAAATACAAATTCGTCACTCAACAATTGAATGGCCGCCTTCCTG
AAGCCAAATGAAACGGACTCCCGAATGCCGAGCTCAGTGGACAGAATGAG
AATTATTCGATACGAAAGAAATGAAAATAGTGAAGTGGAATTTAAATTCA
TAATTGATCTAGGAGATTTTACACCGGAGGAAATCGGAATAAATCAAACC
GGTTATCAAGTGGCCATCAGTGGCAGTCGAGTGGTTCTTCCTGGATCGCT
AAGGAAATCGAAAGAGTTTTACGAAGTAGTGTCACTGCCGAAAAATGCTG
ACATGGGCAAAGATCTCGAAGCCCAATTCAATCCAGATGGAAATCTCATA
ATCAAAATCCAAATCGTTCCCCGATTGTTTTCGTCCTCAACTTACGTGAC
CCCGAAACAGAAATTTGATCGATGTCCTTTGATTGAGGATGAGAAAACAT
TTTTTGTGGAACAAGTGATTGTCGACCAAGAATTCCGCGACGCCGACATT
AAGGTCAATGTTGATGGGAATATCATTAATATTTTTGCTGCTATTGAAAC
TAAGAATGATAATGGAGACATCATTGTCAAGGAATATCATGAAGAATGCC
GGCTTCCTCCTCATATTAATCCGGACGATCTCCGTGCAGATTACATGAAT
GGCGTGCTCGCACTAAATGCCATTTGTAGATCGGGAAACAACTCAAGGTA
TGGCTCATTACGATCAAATAGAACTGGAATGTCAACCTTAAGTGATGTGT
TTCATTATTAATTGTCAAACTGAACCCACTGCACCTATACCGCTGTACTT
TTATAATATATATATCTAGTTGATTGTTTTTGTATGTTTTATATTCTTTT
ATATTATTCTTGTCATTTGGGGAGCACAAAAGGAGGTCAACATCCCATGA
GCAAATTCGGTTAGCCAC
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protein sequence of SMED30018802-orf-1

>SMED30018802-orf-1 ID=SMED30018802-orf-1|Name=SMED30018802-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=242bp
MAAFLKPNETDSRMPSSVDRMRIIRYERNENSEVEFKFIIDLGDFTPEEI
GINQTGYQVAISGSRVVLPGSLRKSKEFYEVVSLPKNADMGKDLEAQFNP
DGNLIIKIQIVPRLFSSSTYVTPKQKFDRCPLIEDEKTFFVEQVIVDQEF
RDADIKVNVDGNIINIFAAIETKNDNGDIIVKEYHEECRLPPHINPDDLR
ADYMNGVLALNAICRSGNNSRYGSLRSNRTGMSTLSDVFHY*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000034epidermis
PLANA:0000054dorsal region of the epidermis
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR002068A-crystallin/Hsp20_dom
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3DG3DSA:2.60.40.790coord: 19..110
e-value: 3.3E-9
score: 38.8
IPR008978HSP20-like chaperoneGENE3DG3DSA:2.60.40.790coord: 144..213
e-value: 5.3E-12
score: 47.8
IPR008978HSP20-like chaperoneSUPERFAMILYSSF49764HSP20-like chaperonescoord: 150..212
IPR008978HSP20-like chaperoneSUPERFAMILYSSF49764HSP20-like chaperonescoord: 21..110
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 148..214
e-value: 3.8E-8
score: 33.4
coord: 32..109
e-value: 6.0E-5
score: 23.1
NoneNo IPR availablePANTHERPTHR45640FAMILY NOT NAMEDcoord: 146..213
coord: 15..109
NoneNo IPR availablePANTHERPTHR45640:SF13HEAT SHOCK PROTEIN 67B3coord: 146..213
NoneNo IPR availablePANTHERPTHR45640:SF13HEAT SHOCK PROTEIN 67B3coord: 15..109
NoneNo IPR availableCDDcd06464ACD_sHsps-likecoord: 132..210
e-value: 6.02609E-9
score: 49.8601