BSD domain-containing protein

Overview


Name	BSD domain-containing protein
Smed ID	SMED30018767
Length (bp)	1368

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of BSD domain-containing protein (SMED30018767) t-SNE clustered cells

Violin plots show distribution of expression levels for BSD domain-containing protein (SMED30018767) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of BSD domain-containing protein (SMED30018767) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for BSD domain-containing protein (SMED30018767) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30018767

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
intestinal phagocyte	SMED30018767	SMESG000006780.1	PL08009B1F12	ncbi_smed_ests	PMID:23079596 Forsthoefel et al., 2012
protonephridia	SMED30018767	SMESG000006780.1	dd_Smed_v4_2724_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
nervous system	SMED30018767	SMESG000006780.1	dd_Smed_v4_2724_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30018767	SMESG000006780.1	dd_Smed_v4_2724_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of BSD domain-containing protein vs. Ensembl Human
Match: BSDC1 (BSD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25501])

HSP 1 Score: 81.6481 bits (200), Expect = 3.895e-16
Identity = 60/217 (27.65%), Postives = 98/217 (45.16%), Query Frame = 3

Query:  150 WLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRID------TRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            WL+  Y     +S +  + +K DLTEF  V+  D    +  TA  +K  L              + S  +T K+K  ++  L  +S      P+   D  CD      +     +       R+ +LQ +  T+  +PD     P+L  F  W  +  L++ + +I+EL+  +  I   Y  +VP   +H EFW RYFY+V  +  E++RR+ALK R
Sbjct:   13 WLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLA------------TEGSSGATEKMKKGLSDFLGVISDTFAPSPDKTID--CDVITLMGTPSGTAEPYDGTKARLYSLQSDPATYCNEPD---GPPEL--FDAWLSQFCLEEKKGEISELLVGSPSIRALYTKMVPAAVSHSEFWHRYFYKVHQLEQEQARRDALKQR 210

[Close]

BLAST of BSD domain-containing protein vs. Ensembl Human
Match: BSDC1 (BSD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25501])

HSP 1 Score: 80.4925 bits (197), Expect = 9.810e-16
Identity = 60/217 (27.65%), Postives = 98/217 (45.16%), Query Frame = 3

Query:  150 WLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRID------TRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            WL+  Y     +S +  + +K DLTEF  V+  D    +  TA  +K  L              + S  +T K+K  ++  L  +S      P+   D  CD      +     +       R+ +LQ +  T+  +PD     P+L D   W  +  L++ + +I+EL+  +  I   Y  +VP   +H EFW RYFY+V  +  E++RR+ALK R
Sbjct:   13 WLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLA------------TEGSSGATEKMKKGLSDFLGVISDTFAPSPDKTID--CDVITLMGTPSGTAEPYDGTKARLYSLQSDPATYCNEPD---GPPELFD--AWLSQFCLEEKKGEISELLVGSPSIRALYTKMVPAAVSHSEFWHRYFYKVHQLEQEQARRDALKQR 210

[Close]

BLAST of BSD domain-containing protein vs. Ensembl Human
Match: BSDC1 (BSD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25501])

HSP 1 Score: 77.7962 bits (190), Expect = 9.293e-15
Identity = 61/222 (27.48%), Postives = 101/222 (45.50%), Query Frame = 3

Query:  150 WLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGS-----EEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRID------TRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            WL+  Y     +S +  + +K DLTEF  V+  D    +  TA  +K  L  +       F      + + S  +T K+K  ++  L  +S      P+   D  CD      +     +       R+ +LQ +  T+  +PD     P+L  F  W  +  L++ + +I+EL+  +  I   Y  +VP   +H EFW RYFY+V  +  E++RR+ALK R
Sbjct:   13 WLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLAIAACSRGACFLCPFSIQTEGSSGATEKMKKGLSDFLGVISDTFAPSPDKTID--CDVITLMGTPSGTAEPYDGTKARLYSLQSDPATYCNEPD---GPPEL--FDAWLSQFCLEEKKGEISELLVGSPSIRALYTKMVPAAVSHSEFWHRYFYKVHQLEQEQARRDALKQR 227

[Close]

BLAST of BSD domain-containing protein vs. Ensembl Human
Match: BSDC1 (BSD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25501])

HSP 1 Score: 77.411 bits (189), Expect = 1.372e-14
Identity = 62/224 (27.68%), Postives = 102/224 (45.54%), Query Frame = 3

Query:  150 WLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSE-------EFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRID------TRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            WL+  Y     +S +  + +K DLTEF  V+  D    +  TA  +K  L  +          P S   + + S  +T K+K  ++  L  +S      P+   D  CD      +     +       R+ +LQ +  T+  +PD     P+L  F  W  +  L++ + +I+EL+  +  I   Y  +VP   +H EFW RYFY+V  +  E++RR+ALK R
Sbjct:   13 WLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLAIAACSRGACFLCPFSI--QTEGSSGATEKMKKGLSDFLGVISDTFAPSPDKTID--CDVITLMGTPSGTAEPYDGTKARLYSLQSDPATYCNEPD---GPPEL--FDAWLSQFCLEEKKGEISELLVGSPSIRALYTKMVPAAVSHSEFWHRYFYKVHQLEQEQARRDALKQR 227

[Close]

BLAST of BSD domain-containing protein vs. Ensembl Human
Match: BSDC1 (BSD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25501])

HSP 1 Score: 75.485 bits (184), Expect = 2.803e-14
Identity = 38/114 (33.33%), Postives = 62/114 (54.39%), Query Frame = 3

Query:  441 DEYCDNADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            D  C  A T   +  ++  R+ +LQ +  T+  +PD     P+L  F  W  +  L++ + +I+EL+  +  I   Y  +VP   +H EFW RYFY+V  +  E++RR+ALK R
Sbjct:   46 DTACTIAATASVVKEKLAARLYSLQSDPATYCNEPD---GPPEL--FDAWLSQFCLEEKKGEISELLVGSPSIRALYTKMVPAAVSHSEFWHRYFYKVHQLEQEQARRDALKQR 154

[Close]

BLAST of BSD domain-containing protein vs. Ensembl Celegans
Match: Y97E10AR.6 (pep chromosome:WBcel235:V:8012397:8013951:-1 gene:WBGene00022401.1 transcript:Y97E10AR.6.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y97E10AR.6)

HSP 1 Score: 60.077 bits (144), Expect = 1.094e-9
Identity = 30/87 (34.48%), Postives = 46/87 (52.87%), Query Frame = 3

Query:  498 RISNLQKNRKTFEVDPDESETDPDLGDFLE-WKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEE 755
            ++S +Q N   +  +P  SE       F E W  + NLD++  +I  L+ NN  + + +A+LVP   NH+ FW RYFY +     EE
Sbjct:  192 KLSEIQSNESIYLTEPGNSE-------FYERWISRFNLDEYDGEINILLANNPSLRQMFANLVPGSVNHETFWKRYFYAIEVAEMEE 271

[Close]

BLAST of BSD domain-containing protein vs. Ensembl Zebrafish
Match: bsdc1 (BSD domain containing 1 [Source:NCBI gene;Acc:794882])

HSP 1 Score: 85.5001 bits (210), Expect = 1.504e-17
Identity = 61/216 (28.24%), Postives = 101/216 (46.76%), Query Frame = 3

Query:  153 LKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDT------RISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            L   +    ++S + ++ +K DLTEF++V+  D    VV TA  +K+ L              + S  +T K+K  I  +L  ++  L  PP+   D  CD      +     +       R+ +LQ +  T+  +PD          F  W    +L++ +++I+EL+ ++  I   Y  +VP    H EFW RYFY+V  +  EE+RR ALK R
Sbjct:   13 LTQSFQSVKDKSAEAYEFIKRDLTEFSSVVQHDTACSVVATANAIKSKLA------------VEGSSETTEKVKKGITNILGVITDTLAPPPDKTID--CDVITLVATPTGTTEVYDSGKARLYSLQADPATYCNEPDGPP-----QQFDSWLSTFSLEERKAEISELLVSSPAIRALYTKMVPAAVAHAEFWQRYFYKVFQLEQEEARRVALKQR 209

[Close]

BLAST of BSD domain-containing protein vs. Ensembl Zebrafish
Match: bsdc1 (BSD domain containing 1 [Source:NCBI gene;Acc:794882])

HSP 1 Score: 85.1149 bits (209), Expect = 1.634e-17
Identity = 61/216 (28.24%), Postives = 101/216 (46.76%), Query Frame = 3

Query:  153 LKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDT------RISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            L   +    ++S + ++ +K DLTEF++V+  D    VV TA  +K+ L              + S  +T K+K  I  +L  ++  L  PP+   D  CD      +     +       R+ +LQ +  T+  +PD          F  W    +L++ +++I+EL+ ++  I   Y  +VP    H EFW RYFY+V  +  EE+RR ALK R
Sbjct:   13 LTQSFQSVKDKSAEAYEFIKRDLTEFSSVVQHDTACSVVATANAIKSKLA------------VEGSSETTEKVKKGITNILGVITDTLAPPPDKTID--CDVITLVATPTGTTEVYDSGKARLYSLQADPATYCNEPDGPP-----QQFDSWLSTFSLEERKAEISELLVSSPAIRALYTKMVPAAVAHAEFWQRYFYKVFQLEQEEARRVALKQR 209

[Close]

BLAST of BSD domain-containing protein vs. Ensembl Xenopus
Match: bsdc1 (BSD domain containing 1 [Source:NCBI gene;Acc:595022])

HSP 1 Score: 83.5741 bits (205), Expect = 8.394e-17
Identity = 61/226 (26.99%), Postives = 105/226 (46.46%), Query Frame = 3

Query:  150 WLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCD------NADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIRLSNDEKINS 809
            WL+  Y+   ++S +  + +K DLTEF  V+  D    +  TA  +K+ L+             + S  +T K+K  ++  L  +S      P+   D  CD             + +    R+ +LQ +  T+  +PD S       +F  W    + +  +++I+EL+  +  I   Y  +VP   +H EFW RYFY+V  +  EE+RR+ALK R   D+ ++S
Sbjct:   13 WLQQSYSSVRDKSAEALEFMKRDLTEFTRVVQHDTACTIAATASVVKDKLV------------VEGSSGTTDKVKKGLSNFLGVISDTFAPSPDKTID--CDVITLMATPSGTTELYDSTKARLYSLQSDPATYCNEPDGSP-----AEFDAWLAYWDPEHRKAEISELLVTSPSIRALYTKMVPAAVSHSEFWQRYFYKVHQLEQEEARRDALKQRA--DQSVHS 217

[Close]

BLAST of BSD domain-containing protein vs. Ensembl Xenopus
Match: bsdc1 (BSD domain containing 1 [Source:NCBI gene;Acc:595022])

HSP 1 Score: 82.8037 bits (203), Expect = 1.846e-16
Identity = 61/226 (26.99%), Postives = 105/226 (46.46%), Query Frame = 3

Query:  150 WLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCD------NADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIRLSNDEKINS 809
            WL+  Y+   ++S +  + +K DLTEF  V+  D    +  TA  +K+ L+             + S  +T K+K  ++  L  +S      P+   D  CD             + +    R+ +LQ +  T+  +PD S       +F  W    + +  +++I+EL+  +  I   Y  +VP   +H EFW RYFY+V  +  EE+RR+ALK R   D+ ++S
Sbjct:   81 WLQQSYSSVRDKSAEALEFMKRDLTEFTRVVQHDTACTIAATASVVKDKLV------------VEGSSGTTDKVKKGLSNFLGVISDTFAPSPDKTID--CDVITLMATPSGTTELYDSTKARLYSLQSDPATYCNEPDGSP-----AEFDAWLAYWDPEHRKAEISELLVTSPSIRALYTKMVPAAVSHSEFWQRYFYKVHQLEQEEARRDALKQRA--DQSVHS 285

[Close]

BLAST of BSD domain-containing protein vs. Ensembl Mouse
Match: Bsdc1 (BSD domain containing 1 [Source:MGI Symbol;Acc:MGI:1913466])

HSP 1 Score: 80.4925 bits (197), Expect = 6.121e-16
Identity = 60/217 (27.65%), Postives = 98/217 (45.16%), Query Frame = 3

Query:  150 WLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRID------TRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            WL+  Y     +S +  + +K DLTEF  V+  D    +  TA  +K  L              + S  +T K+K  ++  L  +S      P+   D  CD      +     +       R+ +LQ +  T+  +PD     P+L  F  W  +  L++ + +I+EL+  +  I   Y  +VP   +H EFW RYFY+V  +  E++RR+ALK R
Sbjct:   13 WLQQSYQAVKEKSTEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLA------------TEGSSGATEKVKKGLSDFLGVISDTFAPSPDKTID--CDVITLMGTPSGTAEPYDGTKARLYSLQSDPATYCNEPD---GPPEL--FDAWLSEFCLEEKKGEISELLVGSPSIRALYTKMVPAAVSHSEFWHRYFYKVHQLEQEQARRDALKQR 210

[Close]

BLAST of BSD domain-containing protein vs. UniProt/SwissProt
Match: sp|A2BIJ3|BSDC1_DANRE (BSD domain-containing protein 1 OS=Danio rerio OX=7955 GN=bsdc1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.233e-16
Identity = 61/216 (28.24%), Postives = 101/216 (46.76%), Query Frame = 3

Query:  153 LKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDT------RISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            L   +    ++S + ++ +K DLTEF++V+  D    VV TA  +K+ L              + S  +T K+K  I  +L  ++  L  PP+   D  CD      +     +       R+ +LQ +  T+  +PD          F  W    +L++ +++I+EL+ ++  I   Y  +VP    H EFW RYFY+V  +  EE+RR ALK R
Sbjct:   13 LTQSFQSVKDKSAEAYEFIKRDLTEFSSVVQHDTACSVVATANAIKSKLA------------VEGSSETTEKVKKGITNILGVITDTLAPPPDKTID--CDVITLVATPTGTTEVYDSGKARLYSLQADPATYCNEPDGPP-----QQFDSWLSTFSLEERKAEISELLVSSPAIRALYTKMVPAAVAHAEFWQRYFYKVFQLEQEEARRVALKQR 209

[Close]

BLAST of BSD domain-containing protein vs. UniProt/SwissProt
Match: sp|Q5BJ78|BSDC1_XENTR (BSD domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=bsdc1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 4.399e-16
Identity = 61/226 (26.99%), Postives = 105/226 (46.46%), Query Frame = 3

Query:  150 WLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCD------NADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIRLSNDEKINS 809
            WL+  Y+   ++S +  + +K DLTEF  V+  D    +  TA  +K+ L+             + S  +T K+K  ++  L  +S      P+   D  CD             + +    R+ +LQ +  T+  +PD S       +F  W    + +  +++I+EL+  +  I   Y  +VP   +H EFW RYFY+V  +  EE+RR+ALK R   D+ ++S
Sbjct:   13 WLQQSYSSVRDKSAEALEFMKRDLTEFTRVVQHDTACTIAATASVVKDKLV------------VEGSSGTTDKVKKGLSNFLGVISDTFAPSPDKTID--CDVITLMATPSGTTELYDSTKARLYSLQSDPATYCNEPDGSP-----AEFDAWLAYWDPEHRKAEISELLVTSPSIRALYTKMVPAAVSHSEFWQRYFYKVHQLEQEEARRDALKQRA--DQSVHS 217

[Close]

BLAST of BSD domain-containing protein vs. UniProt/SwissProt
Match: sp|Q3SX22|BSDC1_BOVIN (BSD domain-containing protein 1 OS=Bos taurus OX=9913 GN=BSDC1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.355e-15
Identity = 60/217 (27.65%), Postives = 99/217 (45.62%), Query Frame = 3

Query:  150 WLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRID------TRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            WL+  Y     +S +  + +K DLTEF  V+ +D    +  TA  +K  L              + S  +T K+K  ++  L  +S      P+   D  CD      +     +       R+ +LQ +  T+  +PD     P+L  F  W  +  L++ + +I+EL+  +  I   Y  +VP   +H EFW RYFY+V  +  E++RR+ALK R
Sbjct:   44 WLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQRDTACTIAATASVVKEKLT------------TEGSSGATEKMKKGLSDFLGVISDTFAPSPDKTID--CDVITLMGTPSGTAEPYDGTKARLYSLQSDPATYCNEPD---GPPEL--FDAWLSQFCLEEKKGEISELLVGSPSIRALYTKMVPAAVSHSEFWHRYFYKVHQLEQEQARRDALKQR 241

[Close]

BLAST of BSD domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9NW68|BSDC1_HUMAN (BSD domain-containing protein 1 OS=Homo sapiens OX=9606 GN=BSDC1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.870e-15
Identity = 60/217 (27.65%), Postives = 98/217 (45.16%), Query Frame = 3

Query:  150 WLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRID------TRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            WL+  Y     +S +  + +K DLTEF  V+  D    +  TA  +K  L              + S  +T K+K  ++  L  +S      P+   D  CD      +     +       R+ +LQ +  T+  +PD     P+L  F  W  +  L++ + +I+EL+  +  I   Y  +VP   +H EFW RYFY+V  +  E++RR+ALK R
Sbjct:   13 WLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLA------------TEGSSGATEKMKKGLSDFLGVISDTFAPSPDKTID--CDVITLMGTPSGTAEPYDGTKARLYSLQSDPATYCNEPD---GPPEL--FDAWLSQFCLEEKKGEISELLVGSPSIRALYTKMVPAAVSHSEFWHRYFYKVHQLEQEQARRDALKQR 210

[Close]

BLAST of BSD domain-containing protein vs. UniProt/SwissProt
Match: sp|Q80Y55|BSDC1_MOUSE (BSD domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bsdc1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.282e-15
Identity = 60/217 (27.65%), Postives = 98/217 (45.16%), Query Frame = 3

Query:  150 WLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRID------TRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            WL+  Y     +S +  + +K DLTEF  V+  D    +  TA  +K  L              + S  +T K+K  ++  L  +S      P+   D  CD      +     +       R+ +LQ +  T+  +PD     P+L  F  W  +  L++ + +I+EL+  +  I   Y  +VP   +H EFW RYFY+V  +  E++RR+ALK R
Sbjct:   13 WLQQSYQAVKEKSTEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLA------------TEGSSGATEKVKKGLSDFLGVISDTFAPSPDKTID--CDVITLMGTPSGTAEPYDGTKARLYSLQSDPATYCNEPD---GPPEL--FDAWLSEFCLEEKKGEISELLVGSPSIRALYTKMVPAAVSHSEFWHRYFYKVHQLEQEQARRDALKQR 210

[Close]

BLAST of BSD domain-containing protein vs. TrEMBL
Match: A0A164NKZ8 (BSD domain-containing protein OS=Daphnia magna OX=35525 GN=APZ42_030509 PE=4 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.508e-21
Identity = 82/292 (28.08%), Postives = 138/292 (47.26%), Query Frame = 3

Query:  162 IYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIRLSNDEKINSEASPGDWDEGNDVYEENDLTIGDTEQ--HEISEANVTELDKE-KSDLS---KVSLKCKEHDDVVVVRHLIDSSSAS 1019
            +   A ++S +++  V+ D  EF   +S++  T        +K                 D+S  +   +K S+   L QVS   YIPPE DD+             +R+   I  L  +  TF VDPD +E       F  W+E LNL+  Q+ IA L+ NN+ +   +  LVP + +   FW+RY +R+  +  EE++R+ ++     + ++ ++A      +GND+  ++D T+   E+   E+    + E +KE +  LS   K  LKCKE  D+V+V    +S S S
Sbjct:   49 LAQTAKDKSVEVYDYVRKDFDEFTQTVSEEVSTTASALKEKLK----------------IDDSSGTAATVKRSVTSFLNQVSDVFYIPPEDDDEPI---------FLDRLTAIIYTLGSDPATFLVDPDATE-------FEAWQESLNLESQQADIAALLANNEKLRHNFETLVPSKVSEAMFWARYLFRIHVVREEETKRQIIR----KEAQVRAQAD----IKGNDLNWDDDETLTSPEEIPEEVQSKLLAEYEKECQGRLSSDDKGELKCKEKGDMVLVSRSGESGSTS 300

[Close]

BLAST of BSD domain-containing protein vs. TrEMBL
Match: E9FVD7 (BSD domain-containing protein OS=Daphnia pulex OX=6669 GN=DAPPUDRAFT_230208 PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.379e-21
Identity = 83/292 (28.42%), Postives = 138/292 (47.26%), Query Frame = 3

Query:  162 IYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIRLSNDEKINSEASPGDWDEGNDVYEEND--LTIGDTEQHEISEANVTELDKE-KSDLS---KVSLKCKEHDDVVVVRHLIDSSSAS 1019
            +   A ++S +++  V+ D  EF   +S++  T        +K                 D+S  +   +K S+   L QVS   YIPPE DD+             +R+   I  L  +  TF V+PD +E       F  W+E LNL+  Q  IA L+ NN+ +   +  LVP + +   FW+RY +R+  +  EE++R+ ++     + +I ++A   D ++GND+  ++D  LT  +    E+    + E +KE +  LS   K  LKCKE  D+V+V    +S S S
Sbjct:   49 LAQTAKDKSAEVYDYVRKDFDEFTQTVSEEVSTTATALKEKLK----------------IDDSSGTAATVKRSVTSFLNQVSDVFYIPPEDDDEPI---------FLDRLTAIIYTLGSDPATFLVNPDAAE-------FEAWQESLNLESQQEDIAALMANNEKLRNNFEALVPSKVSEAMFWARYLFRIHVVREEETKRQIIR----KEAQIRAQA---DTNQGNDLNWDDDEALTTPEEIPEELQSKLLAEYEKECQVRLSSDDKGELKCKEKGDMVLVSRSGESGSTS 301

[Close]

BLAST of BSD domain-containing protein vs. TrEMBL
Match: A0A3B4F751 (BSD domain containing 1 OS=Pundamilia nyererei OX=303518 PE=4 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 3.511e-19
Identity = 67/218 (30.73%), Postives = 105/218 (48.17%), Query Frame = 3

Query:  147 GWLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDT------RISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            GWL+  +    ++S +  + +K DLTEF+TV+  D    +  TA  ++N L              + S  +T K+K S++  L  +S  L  PP+   D  CD      +     +       R+ +LQ +  T+  +PD     P+   F  W    +LDD + +I+EL+ N+  I   Y  +VP    H EFW RYFY+V  ++ EE+RR ALK R
Sbjct:   10 GWLQQSFQAVKDKSSEALEFIKRDLTEFSTVVQHDTACSIAATATAVRNKLA------------VEGSTETTEKVKKSLSSFLGVISDTLAPPPDKTID--CDVITLVATPAGTTEVYDSSKARLYSLQADPATYCNEPD---GPPE--QFESWLSTFSLDDKKGEISELLVNSPSIRALYTKMVPAAVAHSEFWHRYFYKVFQLDQEEARRLALKQR 208

[Close]

BLAST of BSD domain-containing protein vs. TrEMBL
Match: A0A0S7EWK6 (BSDC1 (Fragment) OS=Poeciliopsis prolifica OX=188132 GN=BSDC1 PE=4 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 7.645e-19
Identity = 69/235 (29.36%), Postives = 111/235 (47.23%), Query Frame = 3

Query:  135 SKSEGWLKGIYNDAY----NQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDT------RISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIRLSNDEKINS 809
            ++ EGW  G +  +Y    ++S +  + +K DLTEF+TV+  D    +V TA  +KN L              + S  +T K+K S++  L  ++  L  PP+   D  CD      +     +       R+ +LQ +  T+  +PD      D      W    +LD+ + +I+EL+ N+  I   Y  +VP   +H EFW RYFY+V  ++ EE+RR ALK R      I +
Sbjct:    2 AEGEGWWGGWFQQSYQAVKDKSSEALEFLKRDLTEFSTVVQHDTACSIVATANAVKNKL------------AVEGSSETTEKVKKSLSSFLGVITDTLAPPPDKTID--CDVITLVATPAGTTEVYDSSKARLYSLQADPATYCNEPDGPPEQFDC-----WLSSFSLDEKKGEISELLVNSPSIRALYTKMVPAAVSHSEFWQRYFYKVFQLDQEEARRVALKQRAEQSAHIET 217

[Close]

BLAST of BSD domain-containing protein vs. TrEMBL
Match: H2MT76 (BSD domain containing 1 OS=Oryzias latipes OX=8090 GN=bsdc1 PE=4 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 8.581e-19
Identity = 67/218 (30.73%), Postives = 106/218 (48.62%), Query Frame = 3

Query:  147 GWLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCD------NADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            GWL+  +    ++S +  + +K DLTEF+TV+  D    +V TA  ++N L              + S  +T K+K S++  L  ++  L  PP+   D  CD       A     + +    R+ +LQ +  T+  +PD       L  F  W    +LD+ +  I+EL+ N+  I   Y  +VP   +H EFW RYFY+V  ++ EE+RR ALK R
Sbjct:   10 GWLQQSFQAVRDKSTEALEFIKRDLTEFSTVVQHDTACSIVATATAVRNKLA------------VEGSSDTTEKVKKSLSSFLGVLTDTLAPPPDKTID--CDVITLVATAAGTTEVYDSSKARLYSLQADPATYCNEPDGP-----LEQFDSWLSTFSLDERKGDISELLVNSPSIRALYTKMVPAAVSHSEFWQRYFYKVFQLDQEEARRVALKQR 208

[Close]

BLAST of BSD domain-containing protein vs. Ensembl Cavefish
Match: bsdc1 (BSD domain containing 1 [Source:NCBI gene;Acc:103023381])

HSP 1 Score: 94.7449 bits (234), Expect = 1.076e-20
Identity = 66/218 (30.28%), Postives = 106/218 (48.62%), Query Frame = 3

Query:  147 GWLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDT------RISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            GWL+  Y    ++S + ++ +K DLTEF+ V+  D    +V TA  +KN L              + S  +T K+K SI+ +L  ++  L  PP+   D  CD      +     +       R+  LQ +  T+  +PD     P+   F  W    +L++ +++I+EL+ N+  I   Y  +VP    H EFW RYFY+V  ++ EE+RR  LK R
Sbjct:   12 GWLQQSYQVIKDRSSEAYEFLKRDLTEFSNVVQHDTACSIVATASAVKNKLA------------VEGSSETTEKVKKSISNILGVITDTLAPPPDMTID--CDVITLVATPAGTTEVYDSSKARLYTLQADPATYCNEPD---GPPE--QFDTWLSNFSLEEKKAEISELLVNSPSIRALYTKMVPAAVAHSEFWQRYFYKVFQLDQEEARRVVLKRR 210

[Close]

BLAST of BSD domain-containing protein vs. Ensembl Cavefish
Match: bsdc1 (BSD domain containing 1 [Source:NCBI gene;Acc:103023381])

HSP 1 Score: 87.8113 bits (216), Expect = 1.790e-18
Identity = 64/216 (29.63%), Postives = 104/216 (48.15%), Query Frame = 3

Query:  153 LKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDT------RISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            L+  Y    ++S + ++ +K DLTEF+ V+  D    +V TA  +KN L              + S  +T K+K SI+ +L  ++  L  PP+   D  CD      +     +       R+  LQ +  T+  +PD     P+   F  W    +L++ +++I+EL+ N+  I   Y  +VP    H EFW RYFY+V  ++ EE+RR  LK R
Sbjct:   13 LQQSYQVIKDRSSEAYEFLKRDLTEFSNVVQHDTACSIVATASAVKNKLA------------VEGSSETTEKVKKSISNILGVITDTLAPPPDMTID--CDVITLVATPAGTTEVYDSSKARLYTLQADPATYCNEPD---GPPE--QFDTWLSNFSLEEKKAEISELLVNSPSIRALYTKMVPAAVAHSEFWQRYFYKVFQLDQEEARRVVLKRR 209

[Close]

BLAST of BSD domain-containing protein vs. Ensembl Sea Lamprey
Match: bsdc1 (BSD domain containing 1 [Source:NCBI gene;Acc:794882])

HSP 1 Score: 88.9669 bits (219), Expect = 1.763e-19
Identity = 61/217 (28.11%), Postives = 100/217 (46.08%), Query Frame = 3

Query:  150 WLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCD------NADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            W+      A ++S +  + +K DLTEF  V+  D  + +  TA  M++ L             AD S  +  K+K S++ +   +S A    P+   D  CD        D      +R+  R+ +LQ +  T+  +PD  +       F+ W E  +L++ +++ AEL+     I   Y  LVP   +H EFW RYFY+V  +  +E+RR  L  R
Sbjct:   13 WIHSTLETARSKSSEALEFIKRDLTEFTEVVQHDTTSTIAATASAMRDKLA------------ADGSTDTGRKMKESLSSLFGVISDAFSPSPDRTLD--CDEVALVATPDGSTEPYDRVKARLYSLQADPATYCNEPDGLQEH-----FMSWAESFSLEERKAETAELLVACPAIRALYTRLVPAAVSHLEFWHRYFYKVYQLEKDEARRADLMKR 210

[Close]

BLAST of BSD domain-containing protein vs. Ensembl Medaka
Match: bsdc1 (BSD domain containing 1 [Source:NCBI gene;Acc:101164018])

HSP 1 Score: 99.3673 bits (246), Expect = 3.230e-22
Identity = 67/218 (30.73%), Postives = 106/218 (48.62%), Query Frame = 3

Query:  147 GWLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCD------NADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            GWL+  +    ++S +  + +K DLTEF+TV+  D    +V TA  ++N L              + S  +T K+K S++  L  ++  L  PP+   D  CD       A     + +    R+ +LQ +  T+  +PD       L  F  W    +LD+ +  I+EL+ N+  I   Y  +VP   +H EFW RYFY+V  ++ EE+RR ALK R
Sbjct:   10 GWLQQSFQAVRDKSTEALEFIKRDLTEFSTVVQHDTACSIVATATAVRNKLA------------VEGSSDTTEKVKKSLSSFLGVLTDTLAPPPDKTID--CDVITLVATAAGTTEVYDSSKARLYSLQADPATYCNEPDGP-----LEQFDSWLSTFSLDERKGDISELLVNSPSIRALYTKMVPAAVSHSEFWQRYFYKVFQLDQEEARRVALKQR 208

[Close]

BLAST of BSD domain-containing protein vs. Ensembl Medaka
Match: bsdc1 (BSD domain containing 1 [Source:NCBI gene;Acc:101164018])

HSP 1 Score: 98.9821 bits (245), Expect = 4.301e-22
Identity = 67/218 (30.73%), Postives = 106/218 (48.62%), Query Frame = 3

Query:  147 GWLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCD------NADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIR 782
            GWL+  +    ++S +  + +K DLTEF+TV+  D    +V TA  ++N L              + S  +T K+K S++  L  ++  L  PP+   D  CD       A     + +    R+ +LQ +  T+  +PD       L  F  W    +LD+ +  I+EL+ N+  I   Y  +VP   +H EFW RYFY+V  ++ EE+RR ALK R
Sbjct:   10 GWLQQSFQAVRDKSTEALEFIKRDLTEFSTVVQHDTACSIVATATAVRNKLA------------VEGSSDTTEKVKKSLSSFLGVLTDTLAPPPDKTID--CDVITLVATAAGTTEVYDSSKARLYSLQADPATYCNEPDGP-----LEQFDSWLSTFSLDERKGDISELLVNSPSIRALYTKMVPAAVSHSEFWQRYFYKVFQLDQEEARRVALKQR 208

[Close]

BLAST of BSD domain-containing protein vs. Planmine SMEST
Match: SMESG000006780.1 (SMESG000006780.1)

HSP 1 Score: 699.508 bits (1804), Expect = 0.000e+0
Identity = 370/372 (99.46%), Postives = 372/372 (100.00%), Query Frame = 3

Query:   69 GDDYEEKIETKISDPEEIQLKESKSEGWLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIRLSNDEKINSEASPGDWDEGNDVYEENDLTIGDTEQHEISEANVTELDKEKSDLSKVSLKCKEHDDVVVVRHLIDSSSASEDNNRDAFNCVDQKDMEEDVGWXXXXXXXXXXXXXXLAKTIPESDVLETKWDDWS 1184
            GDDYEEKIETKISDPEEIQLKESKSEGWLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDAKTVVVKTAVGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRF+HDEFWSRYFYRVASINSEESRREALKIRLSNDEKINSEASPGDWDEGNDVYEENDLTIGDTEQHEISEANVTELDKEKSDLSKVSLKCKEHDDVVVV+HLIDSSSASEDNNRDAFNCVDQKDMEEDVGWEDEIDIDINEDDIELAKTIPESDVLETKWDDWS
Sbjct:   30 GDDYEEKIETKISDPEEIQLKESKSEGWLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDAKTVVVKTAVGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFSHDEFWSRYFYRVASINSEESRREALKIRLSNDEKINSEASPGDWDEGNDVYEENDLTIGDTEQHEISEANVTELDKEKSDLSKVSLKCKEHDDVVVVKHLIDSSSASEDNNRDAFNCVDQKDMEEDVGWEDEIDIDINEDDIELAKTIPESDVLETKWDDWS 401

[Close]

BLAST of BSD domain-containing protein vs. Planmine SMEST
Match: SMESG000006780.1 (SMESG000006780.1)

HSP 1 Score: 698.738 bits (1802), Expect = 0.000e+0
Identity = 370/372 (99.46%), Postives = 372/372 (100.00%), Query Frame = 3

Query:   69 GDDYEEKIETKISDPEEIQLKESKSEGWLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIRLSNDEKINSEASPGDWDEGNDVYEENDLTIGDTEQHEISEANVTELDKEKSDLSKVSLKCKEHDDVVVVRHLIDSSSASEDNNRDAFNCVDQKDMEEDVGWXXXXXXXXXXXXXXLAKTIPESDVLETKWDDWS 1184
            GDDYEEKIETKISDPEEIQLKESKSEGWLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDAKTVVVKTAVGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRF+HDEFWSRYFYRVASINSEESRREALKIRLSNDEKINSEASPGDWDEGNDVYEENDLTIGDTEQHEISEANVTELDKEKSDLSKVSLKCKEHDDVVVV+HLIDSSSASEDNNRDAFNCVDQKDMEEDVGWEDEIDIDINEDDIELAKTIPESDVLETKWDDWS
Sbjct:   22 GDDYEEKIETKISDPEEIQLKESKSEGWLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDAKTVVVKTAVGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFSHDEFWSRYFYRVASINSEESRREALKIRLSNDEKINSEASPGDWDEGNDVYEENDLTIGDTEQHEISEANVTELDKEKSDLSKVSLKCKEHDDVVVVKHLIDSSSASEDNNRDAFNCVDQKDMEEDVGWEDEIDIDINEDDIELAKTIPESDVLETKWDDWS 393

[Close]

BLAST of BSD domain-containing protein vs. Planmine SMEST
Match: SMESG000006780.1 (SMESG000006780.1)

HSP 1 Score: 698.353 bits (1801), Expect = 0.000e+0
Identity = 370/372 (99.46%), Postives = 372/372 (100.00%), Query Frame = 3

Query:   69 GDDYEEKIETKISDPEEIQLKESKSEGWLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDXXXXXXXXXXGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREALKIRLSNDEKINSEASPGDWDEGNDVYEENDLTIGDTEQHEISEANVTELDKEKSDLSKVSLKCKEHDDVVVVRHLIDSSSASEDNNRDAFNCVDQKDMEEDVGWXXXXXXXXXXXXXXLAKTIPESDVLETKWDDWS 1184
            GDDYEEKIETKISDPEEIQLKESKSEGWLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDAKTVVVKTAVGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRF+HDEFWSRYFYRVASINSEESRREALKIRLSNDEKINSEASPGDWDEGNDVYEENDLTIGDTEQHEISEANVTELDKEKSDLSKVSLKCKEHDDVVVV+HLIDSSSASEDNNRDAFNCVDQKDMEEDVGWEDEIDIDINEDDIELAKTIPESDVLETKWDDWS
Sbjct:   27 GDDYEEKIETKISDPEEIQLKESKSEGWLKGIYNDAYNQSGDLWKAVKTDLTEFATVISKDAKTVVVKTAVGMKNGLIGSEEFPESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTCQSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQSKIAELVTNNQFIFEYYADLVPRRFSHDEFWSRYFYRVASINSEESRREALKIRLSNDEKINSEASPGDWDEGNDVYEENDLTIGDTEQHEISEANVTELDKEKSDLSKVSLKCKEHDDVVVVKHLIDSSSASEDNNRDAFNCVDQKDMEEDVGWEDEIDIDINEDDIELAKTIPESDVLETKWDDWS 398

The following BLAST results are available for this feature:

BLAST of BSD domain-containing protein vs. Ensembl Human
BLAST of BSD domain-containing protein vs. Ensembl Celegans
BLAST of BSD domain-containing protein vs. Ensembl Fly
BLAST of BSD domain-containing protein vs. Ensembl Zebrafish
BLAST of BSD domain-containing protein vs. Ensembl Xenopus
BLAST of BSD domain-containing protein vs. Ensembl Mouse
BLAST of BSD domain-containing protein vs. UniProt/SwissProt
BLAST of BSD domain-containing protein vs. TrEMBL
BLAST of BSD domain-containing protein vs. Ensembl Cavefish
BLAST of BSD domain-containing protein vs. Ensembl Sea Lamprey
BLAST of BSD domain-containing protein vs. Ensembl Yeast
BLAST of BSD domain-containing protein vs. Ensembl Nematostella
BLAST of BSD domain-containing protein vs. Ensembl Medaka
BLAST of BSD domain-containing protein vs. Planmine SMEST

BLAST of BSD domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
BSDC1	3.895e-16	27.65	BSD domain containing 1 [Source:HGNC Symbol;Acc:HG...	[more]
BSDC1	9.810e-16	27.65	BSD domain containing 1 [Source:HGNC Symbol;Acc:HG...	[more]
BSDC1	9.293e-15	27.48	BSD domain containing 1 [Source:HGNC Symbol;Acc:HG...	[more]
BSDC1	1.372e-14	27.68	BSD domain containing 1 [Source:HGNC Symbol;Acc:HG...	[more]
BSDC1	2.803e-14	33.33	BSD domain containing 1 [Source:HGNC Symbol;Acc:HG...	[more]

BLAST of BSD domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1


Match Name	E-value	Identity	Description
Y97E10AR.6	1.094e-9	34.48	pep chromosome:WBcel235:V:8012397:8013951:-1 gene:...	[more]

BLAST of BSD domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of BSD domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2


Match Name	E-value	Identity	Description
bsdc1	1.504e-17	28.24	BSD domain containing 1 [Source:NCBI gene;Acc:7948...	[more]
bsdc1	1.634e-17	28.24	BSD domain containing 1 [Source:NCBI gene;Acc:7948...	[more]

BLAST of BSD domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 2


Match Name	E-value	Identity	Description
bsdc1	8.394e-17	26.99	BSD domain containing 1 [Source:NCBI gene;Acc:5950...	[more]
bsdc1	1.846e-16	26.99	BSD domain containing 1 [Source:NCBI gene;Acc:5950...	[more]

BLAST of BSD domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1


Match Name	E-value	Identity	Description
Bsdc1	6.121e-16	27.65	BSD domain containing 1 [Source:MGI Symbol;Acc:MGI...	[more]

BLAST of BSD domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|A2BIJ3\|BSDC1_DANRE	1.233e-16	28.24	BSD domain-containing protein 1 OS=Danio rerio OX=...	[more]
sp\|Q5BJ78\|BSDC1_XENTR	4.399e-16	26.99	BSD domain-containing protein 1 OS=Xenopus tropica...	[more]
sp\|Q3SX22\|BSDC1_BOVIN	1.355e-15	27.65	BSD domain-containing protein 1 OS=Bos taurus OX=9...	[more]
sp\|Q9NW68\|BSDC1_HUMAN	1.870e-15	27.65	BSD domain-containing protein 1 OS=Homo sapiens OX...	[more]
sp\|Q80Y55\|BSDC1_MOUSE	4.282e-15	27.65	BSD domain-containing protein 1 OS=Mus musculus OX...	[more]

BLAST of BSD domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A164NKZ8	8.508e-21	28.08	BSD domain-containing protein OS=Daphnia magna OX=...	[more]
E9FVD7	9.379e-21	28.42	BSD domain-containing protein OS=Daphnia pulex OX=...	[more]
A0A3B4F751	3.511e-19	30.73	BSD domain containing 1 OS=Pundamilia nyererei OX=...	[more]
A0A0S7EWK6	7.645e-19	29.36	BSDC1 (Fragment) OS=Poeciliopsis prolifica OX=1881...	[more]
H2MT76	8.581e-19	30.73	BSD domain containing 1 OS=Oryzias latipes OX=8090...	[more]

BLAST of BSD domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2


Match Name	E-value	Identity	Description
bsdc1	1.076e-20	30.28	BSD domain containing 1 [Source:NCBI gene;Acc:1030...	[more]
bsdc1	1.790e-18	29.63	BSD domain containing 1 [Source:NCBI gene;Acc:1030...	[more]

BLAST of BSD domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1


Match Name	E-value	Identity	Description
bsdc1	1.763e-19	28.11	BSD domain containing 1 [Source:NCBI gene;Acc:7948...	[more]

BLAST of BSD domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of BSD domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of BSD domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2


Match Name	E-value	Identity	Description
bsdc1	3.230e-22	30.73	BSD domain containing 1 [Source:NCBI gene;Acc:1011...	[more]
bsdc1	4.301e-22	30.73	BSD domain containing 1 [Source:NCBI gene;Acc:1011...	[more]

BLAST of BSD domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3


Match Name	E-value	Identity	Description
SMESG000006780.1	0.000e+0	99.46	SMESG000006780.1	[more]
SMESG000006780.1	0.000e+0	99.46	SMESG000006780.1	[more]
SMESG000006780.1	0.000e+0	99.46	SMESG000006780.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30018767 ID=SMED30018767|Name=BSD domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1368bp
AACGTTTTATATAAAATTGAATGAGTTTTTTAAAGTCTTACTATTCATCT
GTATCATCATTTCTTTCTGGAGATGATTATGAAGAAAAAATTGAAACGAA
AATTTCAGATCCCGAAGAAATACAATTGAAAGAATCCAAATCAGAAGGAT
GGTTAAAAGGAATATATAATGATGCATACAATCAAAGTGGAGATCTATGG
AAGGCTGTGAAAACCGATCTAACTGAGTTTGCTACAGTTATATCAAAAGA
TGCTAAAACTGTTGTCGTTAAGACAGCAGTCGGAATGAAAAACGGTTTAA
TTGGTTCTGAAGAATTTCCAGAATCCAATCCTGGAGAAGCAGATAATTCA
CAATCGTCGACATATAAACTCAAATCCAGTATTAATCGAATGCTAGAGCA
AGTCAGTAAAGCCCTTTACATTCCACCAGAATCAGATGACGATGAGTATT
GTGACAACGCTGATACTTGTCAATCAATATGCAACCGCATTGATACTAGA
ATTTCAAACCTGCAAAAAAATCGCAAAACGTTTGAAGTCGATCCTGATGA
AAGTGAAACTGATCCAGATCTCGGAGATTTCCTAGAATGGAAAGAAAAAT
TGAATCTAGATGACTTTCAATCGAAAATAGCCGAATTGGTGACAAACAAC
CAATTTATTTTCGAATATTACGCTGATCTGGTACCGAGGCGTTTCAATCA
CGATGAATTCTGGTCTCGATATTTTTATCGGGTTGCATCAATTAATTCTG
AAGAGTCGAGGAGAGAAGCTCTGAAAATTAGACTTTCTAATGATGAAAAA
ATAAACAGTGAAGCAAGTCCTGGTGACTGGGATGAAGGCAATGATGTTTA
TGAGGAGAATGACTTAACAATCGGTGATACGGAACAACATGAAATATCAG
AAGCTAACGTTACTGAATTGGATAAAGAGAAATCGGATCTTTCAAAAGTG
TCATTAAAATGCAAGGAGCACGATGATGTTGTTGTTGTTAGGCATTTAAT
TGATAGCTCATCAGCATCTGAAGATAATAACCGAGATGCATTCAATTGTG
TTGACCAAAAAGATATGGAAGAAGATGTAGGTTGGGAAGACGAAATTGAT
ATTGATATAAATGAAGACGATATTGAATTAGCAAAGACAATTCCAGAGTC
TGATGTTTTAGAGACGAAGTGGGATGATTGGTCATAACCTTTACAAAACA
GAAGTTATACCTAATTTAATTCTAATTAATTAATAATGCACGTTATTGAA
ATAATTTTCATTATATTGACTGTTTGCAAACGGTTCATGGAGTAGAGGTC
TATTTAAATTTAATTGATAATTACTCAGAAAACTCAATCTATCAATCATC
ATTTCATGTATTCACACA

protein sequence of SMED30018767-orf-1

>SMED30018767-orf-1 ID=SMED30018767-orf-1|Name=SMED30018767-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=389bp
MSFLKSYYSSVSSFLSGDDYEEKIETKISDPEEIQLKESKSEGWLKGIYN
DAYNQSGDLWKAVKTDLTEFATVISKDAKTVVVKTAVGMKNGLIGSEEFP
ESNPGEADNSQSSTYKLKSSINRMLEQVSKALYIPPESDDDEYCDNADTC
QSICNRIDTRISNLQKNRKTFEVDPDESETDPDLGDFLEWKEKLNLDDFQ
SKIAELVTNNQFIFEYYADLVPRRFNHDEFWSRYFYRVASINSEESRREA
LKIRLSNDEKINSEASPGDWDEGNDVYEENDLTIGDTEQHEISEANVTEL
DKEKSDLSKVSLKCKEHDDVVVVRHLIDSSSASEDNNRDAFNCVDQKDME
EDVGWEDEIDIDINEDDIELAKTIPESDVLETKWDDWS*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000020	protonephridia
PLANA:0000070	intestinal phagocyte
PLANA:0000099	neuron

Vocabulary: **INTERPRO**
Term	Definition
IPR035925	BSD_dom_sf
IPR005607	BSD_dom

Vocabulary: **molecular function**
Term	Definition
GO:0003674	molecular_function

Vocabulary: **cellular component**
Term	Definition
GO:0005575	cellular_component

Vocabulary: **biological process**
Term	Definition
GO:0008150	biological_process

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005607	BSD domain	SMART	SM00751	wurzfinal6	coord: 189..241 e-value: 1.1E-5 score: 34.8
IPR005607	BSD domain	PFAM	PF03909	BSD	coord: 189..246 e-value: 1.1E-10 score: 41.4
IPR005607	BSD domain	PROSITE	PS50858	BSD	coord: 189..241 score: 14.342
IPR035925	BSD domain superfamily	GENE3D	G3DSA:1.10.3970.10		coord: 146..251 e-value: 1.1E-7 score: 33.5
None	No IPR available	PANTHER	PTHR16019	SYNAPSE-ASSOCIATED PROTEIN	coord: 33..371
None	No IPR available	PANTHER	PTHR16019:SF5	BSD DOMAIN-CONTAINING PROTEIN 1	coord: 33..371
None	No IPR available	SUPERFAMILY	SSF140383	BSD domain-like	coord: 152..247

Main menu

BSD domain-containing protein

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Owlery

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