Small ubiquitin-related modifier
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30018755 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 14
Homology
BLAST of Small ubiquitin-related modifier vs. Ensembl Human
Match: SUMO3 (small ubiquitin like modifier 3 [Source:HGNC Symbol;Acc:HGNC:11124]) HSP 1 Score: 107.842 bits (268), Expect = 2.506e-30 Identity = 48/78 (61.54%), Postives = 60/78 (76.92%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGG Sbjct: 15 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92
BLAST of Small ubiquitin-related modifier vs. Ensembl Human
Match: SUMO2 (small ubiquitin like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]) HSP 1 Score: 107.457 bits (267), Expect = 2.726e-30 Identity = 54/93 (58.06%), Postives = 66/93 (70.97%), Query Frame = 3 Query: 45 MAD---KEGTP----EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 MAD KEG +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGG Sbjct: 1 MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 93
BLAST of Small ubiquitin-related modifier vs. Ensembl Human
Match: SUMO4 (small ubiquitin like modifier 4 [Source:HGNC Symbol;Acc:HGNC:21181]) HSP 1 Score: 96.2857 bits (238), Expect = 6.932e-26 Identity = 44/77 (57.14%), Postives = 53/77 (68.83%), Query Frame = 3 Query: 72 HINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 HIN+KV GQDG+V+ FKIK+ T L KLM AYC+ GL +RF F G I TD P L+ME+ DTI+VFQ TGG Sbjct: 17 HINLKVAGQDGSVVQFKIKRQTPLSKLMKAYCEPRGLSVKQIRFRFGGQPISGTDKPAQLEMEDEDTIDVFQQPTGG 93
BLAST of Small ubiquitin-related modifier vs. Ensembl Human
Match: SUMO1 (small ubiquitin like modifier 1 [Source:HGNC Symbol;Acc:HGNC:12502]) HSP 1 Score: 90.1225 bits (222), Expect = 2.531e-23 Identity = 43/99 (43.43%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 45 MADKEGTP-----------EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA 308 M+D+E P E+I +KV GQD + IHFK+K T L+KL +YC R G+ +++RF+F+G I + +P L MEE D IEV+Q QTGG + Sbjct: 1 MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHS 99
BLAST of Small ubiquitin-related modifier vs. Ensembl Human
Match: SUMO1 (small ubiquitin like modifier 1 [Source:HGNC Symbol;Acc:HGNC:12502]) HSP 1 Score: 90.1225 bits (222), Expect = 2.531e-23 Identity = 43/99 (43.43%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 45 MADKEGTP-----------EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA 308 M+D+E P E+I +KV GQD + IHFK+K T L+KL +YC R G+ +++RF+F+G I + +P L MEE D IEV+Q QTGG + Sbjct: 1 MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHS 99
BLAST of Small ubiquitin-related modifier vs. Ensembl Celegans
Match: smo-1 (Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]) HSP 1 Score: 87.0409 bits (214), Expect = 1.176e-22 Identity = 36/79 (45.57%), Postives = 56/79 (70.89%), Query Frame = 3 Query: 66 PEHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 E+I +KV GQD +HF++K T++ KL +Y DR G+ +++RF+FDG I + D+P +L+ME++D IEV+Q Q GG Sbjct: 12 AEYIKIKVVGQDSNEVHFRVKYGTSMAKLKKSYADRTGVAVNSLRFLFDGRRINDDDTPKTLEMEDDDVIEVYQEQLGG 90
BLAST of Small ubiquitin-related modifier vs. Ensembl Fly
Match: smt3 (gene:FBgn0264922 transcript:FBtr0346716) HSP 1 Score: 121.709 bits (304), Expect = 3.528e-36 Identity = 58/84 (69.05%), Postives = 65/84 (77.38%), Query Frame = 3 Query: 54 KEGTPEHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGS 305 K G EHIN+KV GQD AV+ FKIKK+T LRKLMNAYCDR GL VRF FDG I E D+PTSL+MEE DTIEV+Q QTGG+ Sbjct: 6 KGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGGA 89
BLAST of Small ubiquitin-related modifier vs. Ensembl Fly
Match: smt3 (gene:FBgn0264922 transcript:FBtr0079356) HSP 1 Score: 121.709 bits (304), Expect = 3.528e-36 Identity = 58/84 (69.05%), Postives = 65/84 (77.38%), Query Frame = 3 Query: 54 KEGTPEHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGS 305 K G EHIN+KV GQD AV+ FKIKK+T LRKLMNAYCDR GL VRF FDG I E D+PTSL+MEE DTIEV+Q QTGG+ Sbjct: 6 KGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGGA 89
BLAST of Small ubiquitin-related modifier vs. Ensembl Zebrafish
Match: sumo3b (small ubiquitin like modifier 3b [Source:NCBI gene;Acc:436950]) HSP 1 Score: 109.383 bits (272), Expect = 3.059e-31 Identity = 49/80 (61.25%), Postives = 61/80 (76.25%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA 308 +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGGS Sbjct: 15 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSIRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGSC 94
BLAST of Small ubiquitin-related modifier vs. Ensembl Zebrafish
Match: sumo3a (small ubiquitin like modifier 3a [Source:NCBI gene;Acc:406398]) HSP 1 Score: 109.383 bits (272), Expect = 3.562e-31 Identity = 49/80 (61.25%), Postives = 61/80 (76.25%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA 308 +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGGS Sbjct: 15 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSIRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGSC 94
BLAST of Small ubiquitin-related modifier vs. Ensembl Zebrafish
Match: sumo2b (small ubiquitin like modifier 2b [Source:NCBI gene;Acc:445027]) HSP 1 Score: 107.071 bits (266), Expect = 2.817e-30 Identity = 48/78 (61.54%), Postives = 60/78 (76.92%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGG Sbjct: 16 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLTMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 93
BLAST of Small ubiquitin-related modifier vs. Ensembl Zebrafish
Match: sumo2b (small ubiquitin like modifier 2b [Source:NCBI gene;Acc:445027]) HSP 1 Score: 107.071 bits (266), Expect = 2.817e-30 Identity = 48/78 (61.54%), Postives = 60/78 (76.92%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGG Sbjct: 16 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLTMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 93
BLAST of Small ubiquitin-related modifier vs. Ensembl Zebrafish
Match: sumo2a (small ubiquitin like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]) HSP 1 Score: 103.219 bits (256), Expect = 8.841e-29 Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 3 Query: 72 HINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 HIN++V QDG+V+ FKIKK+ L KLM YCDR GL +RF+FDG +IKETD+P L+ME+ D IEVFQ Q G Sbjct: 9 HINLRVSSQDGSVVQFKIKKHAPLSKLMKVYCDRQGLTRKLIRFMFDGESIKETDTPALLEMEDEDAIEVFQEQLAG 85
BLAST of Small ubiquitin-related modifier vs. Ensembl Xenopus
Match: sumo3 (small ubiquitin like modifier 3 [Source:NCBI gene;Acc:100125978]) HSP 1 Score: 109.383 bits (272), Expect = 4.763e-31 Identity = 49/78 (62.82%), Postives = 60/78 (76.92%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 +HIN+KV GQDG+V+ FKIK++T L KLM AYCDR GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGG Sbjct: 9 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 86
BLAST of Small ubiquitin-related modifier vs. Ensembl Xenopus
Match: sumo2 (small ubiquitin-like modifier 2 [Source:NCBI gene;Acc:549160]) HSP 1 Score: 109.383 bits (272), Expect = 5.699e-31 Identity = 55/94 (58.51%), Postives = 67/94 (71.28%), Query Frame = 3 Query: 45 MAD---KEGTP----EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGS 305 MAD KEG +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGGS Sbjct: 1 MADDKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLNKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGS 94
BLAST of Small ubiquitin-related modifier vs. Ensembl Xenopus
Match: sumo3 (small ubiquitin like modifier 3 [Source:NCBI gene;Acc:100125978]) HSP 1 Score: 108.997 bits (271), Expect = 6.002e-31 Identity = 49/78 (62.82%), Postives = 60/78 (76.92%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 +HIN+KV GQDG+V+ FKIK++T L KLM AYCDR GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGG Sbjct: 11 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 88
BLAST of Small ubiquitin-related modifier vs. Ensembl Xenopus
Match: sumo3 (small ubiquitin like modifier 3 [Source:NCBI gene;Acc:100125978]) HSP 1 Score: 108.997 bits (271), Expect = 6.173e-31 Identity = 49/78 (62.82%), Postives = 60/78 (76.92%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 +HIN+KV GQDG+V+ FKIK++T L KLM AYCDR GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGG Sbjct: 15 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92
BLAST of Small ubiquitin-related modifier vs. Ensembl Xenopus
Match: sumo2 (small ubiquitin-like modifier 2 [Source:NCBI gene;Acc:549160]) HSP 1 Score: 109.383 bits (272), Expect = 6.191e-31 Identity = 49/79 (62.03%), Postives = 61/79 (77.22%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGS 305 +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGGS Sbjct: 26 DHINLKVAGQDGSVVQFKIKRHTPLNKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGS 104
BLAST of Small ubiquitin-related modifier vs. Ensembl Mouse
Match: Sumo3 (small ubiquitin-like modifier 3 [Source:MGI Symbol;Acc:MGI:1336201]) HSP 1 Score: 112.464 bits (280), Expect = 4.657e-32 Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA 308 +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGGSA Sbjct: 18 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGSA 97
BLAST of Small ubiquitin-related modifier vs. Ensembl Mouse
Match: Sumo3 (small ubiquitin-like modifier 3 [Source:MGI Symbol;Acc:MGI:1336201]) HSP 1 Score: 112.079 bits (279), Expect = 5.478e-32 Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA 308 +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGGSA Sbjct: 15 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGSA 94
BLAST of Small ubiquitin-related modifier vs. Ensembl Mouse
Match: Sumo3 (small ubiquitin-like modifier 3 [Source:MGI Symbol;Acc:MGI:1336201]) HSP 1 Score: 111.694 bits (278), Expect = 6.808e-32 Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA 308 +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGGSA Sbjct: 15 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGSA 94
BLAST of Small ubiquitin-related modifier vs. Ensembl Mouse
Match: Sumo2 (small ubiquitin-like modifier 2 [Source:MGI Symbol;Acc:MGI:2158813]) HSP 1 Score: 107.457 bits (267), Expect = 1.872e-30 Identity = 54/93 (58.06%), Postives = 66/93 (70.97%), Query Frame = 3 Query: 45 MAD---KEGTP----EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 MAD KEG +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGG Sbjct: 1 MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 93
BLAST of Small ubiquitin-related modifier vs. Ensembl Mouse
Match: Sumo1 (small ubiquitin-like modifier 1 [Source:MGI Symbol;Acc:MGI:1197010]) HSP 1 Score: 90.1225 bits (222), Expect = 1.737e-23 Identity = 43/99 (43.43%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 45 MADKEGTP-----------EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA 308 M+D+E P E+I +KV GQD + IHFK+K T L+KL +YC R G+ +++RF+F+G I + +P L MEE D IEV+Q QTGG + Sbjct: 1 MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHS 99
BLAST of Small ubiquitin-related modifier vs. UniProt/SwissProt
Match: sp|Q9Z172|SUMO3_MOUSE (Small ubiquitin-related modifier 3 OS=Mus musculus OX=10090 GN=Sumo3 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.762e-31 Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA 308 +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGGSA Sbjct: 15 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGSA 94
BLAST of Small ubiquitin-related modifier vs. UniProt/SwissProt
Match: sp|Q5XIF4|SUMO3_RAT (Small ubiquitin-related modifier 3 OS=Rattus norvegicus OX=10116 GN=Sumo3 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.308e-30 Identity = 49/80 (61.25%), Postives = 62/80 (77.50%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA 308 +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGG+A Sbjct: 15 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGTA 94
BLAST of Small ubiquitin-related modifier vs. UniProt/SwissProt
Match: sp|Q6DI05|SUMO3_DANRE (Small ubiquitin-related modifier 3 OS=Danio rerio OX=7955 GN=sumo3 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.899e-30 Identity = 49/80 (61.25%), Postives = 61/80 (76.25%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA 308 +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGGS Sbjct: 15 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSIRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGSC 94
BLAST of Small ubiquitin-related modifier vs. UniProt/SwissProt
Match: sp|Q17QV3|SUMO3_BOVIN (Small ubiquitin-related modifier 3 OS=Bos taurus OX=9913 GN=SUMO3 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.620e-30 Identity = 50/86 (58.14%), Postives = 63/86 (73.26%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA*MTLLF 326 +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGGS + L Sbjct: 15 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGSRVASCLL 100
BLAST of Small ubiquitin-related modifier vs. UniProt/SwissProt
Match: sp|Q6GPW2|SMO2B_XENLA (Small ubiquitin-related modifier 2-B OS=Xenopus laevis OX=8355 GN=sumo2-b PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.621e-30 Identity = 55/94 (58.51%), Postives = 67/94 (71.28%), Query Frame = 3 Query: 45 MAD---KEGTP----EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGS 305 MAD KEG +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGGS Sbjct: 1 MADDKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLNKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGS 94
BLAST of Small ubiquitin-related modifier vs. TrEMBL
Match: A0A267EYF5 (Small ubiquitin-related modifier (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig002796g1 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 6.552e-41 Identity = 64/91 (70.33%), Postives = 75/91 (82.42%), Query Frame = 3 Query: 30 FEIFNMADKEGTPEHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 + +M+ + EHIN+KVQGQDGAVIHFKIKKNT LRKLM YCDRLGL+ TVRFIFDG N++E+D+P +LDMEENDTIEVFQSQ GG Sbjct: 8 YSAASMSGTNASSEHINLKVQGQDGAVIHFKIKKNTPLRKLMTTYCDRLGLRAQTVRFIFDGNNVEESDTPATLDMEENDTIEVFQSQVGG 98
BLAST of Small ubiquitin-related modifier vs. TrEMBL
Match: A0A267EXW6 (Small ubiquitin-related modifier (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig002796g2 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 8.724e-41 Identity = 64/91 (70.33%), Postives = 75/91 (82.42%), Query Frame = 3 Query: 30 FEIFNMADKEGTPEHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 + +M+ + EHIN+KVQGQDGAVIHFKIKKNT LRKLM YCDRLGL+ TVRFIFDG N++E+D+P +LDMEENDTIEVFQSQ GG Sbjct: 7 YSAASMSGTNASSEHINLKVQGQDGAVIHFKIKKNTPLRKLMTTYCDRLGLRAQTVRFIFDGNNVEESDTPATLDMEENDTIEVFQSQVGG 97
BLAST of Small ubiquitin-related modifier vs. TrEMBL
Match: A0A267E716 (Small ubiquitin-related modifier OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig021607g1 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.809e-40 Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = 3 Query: 45 MADKEGTPEHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 M+ + EHIN+KVQGQDGAVIHFKIKKNT LRKLM YCDRLGL+ TVRFIFDG N++E+D+P +LDMEENDTIEVFQSQ GG Sbjct: 1 MSGTNASSEHINLKVQGQDGAVIHFKIKKNTPLRKLMTTYCDRLGLRAQTVRFIFDGNNVEESDTPATLDMEENDTIEVFQSQVGG 86
BLAST of Small ubiquitin-related modifier vs. TrEMBL
Match: A0A1I8IUK5 (Small ubiquitin-related modifier OS=Macrostomum lignano OX=282301 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.285e-40 Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = 3 Query: 45 MADKEGTPEHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 M+ + EHIN+KVQGQDGAVIHFKIKKNT LRKLM YCDRLGL+ TVRFIFDG N++E+D+P +LDMEENDTIEVFQSQ GG Sbjct: 1 MSGTNASSEHINLKVQGQDGAVIHFKIKKNTPLRKLMTTYCDRLGLRAQTVRFIFDGNNVEESDTPATLDMEENDTIEVFQSQVGG 86
BLAST of Small ubiquitin-related modifier vs. TrEMBL
Match: Q5BS96 (Small ubiquitin-related modifier OS=Schistosoma japonicum OX=6182 GN=SUMO-2 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.479e-39 Identity = 62/85 (72.94%), Postives = 75/85 (88.24%), Query Frame = 3 Query: 48 ADKEGTPEHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 A+KE EHIN+KVQGQ+G++IHFKI+KNT LRKLM AYC+RLGLK +VRFIFDG ++ ETD+P SL+MEENDTIEVFQ+QTGG Sbjct: 5 ANKEAPSEHINIKVQGQEGSIIHFKIRKNTPLRKLMLAYCERLGLKQPSVRFIFDGNSVHETDTPASLEMEENDTIEVFQTQTGG 89
BLAST of Small ubiquitin-related modifier vs. Ensembl Cavefish
Match: ENSAMXT00000057127.1 (small ubiquitin-related modifier 2-like [Source:NCBI gene;Acc:103045390]) HSP 1 Score: 109.768 bits (273), Expect = 2.101e-31 Identity = 49/79 (62.03%), Postives = 61/79 (77.22%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGS 305 EHIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGG+ Sbjct: 16 EHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLTMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGA 94
BLAST of Small ubiquitin-related modifier vs. Ensembl Cavefish
Match: ENSAMXT00000035970.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000157.1:639445:644773:-1 gene:ENSAMXG00000037441.1 transcript:ENSAMXT00000035970.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 109.383 bits (272), Expect = 2.459e-31 Identity = 49/79 (62.03%), Postives = 61/79 (77.22%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGS 305 +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGGS Sbjct: 9 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSIRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGS 87
BLAST of Small ubiquitin-related modifier vs. Ensembl Cavefish
Match: ENSAMXT00000038721.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000157.1:639445:644645:-1 gene:ENSAMXG00000037441.1 transcript:ENSAMXT00000038721.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 110.153 bits (274), Expect = 3.895e-31 Identity = 54/101 (53.47%), Postives = 70/101 (69.31%), Query Frame = 3 Query: 12 LHLSFKFEIFNMADKEGTP---EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGS 305 LH+S + + +EG +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGGS Sbjct: 30 LHVSLCYISPSFLLQEGVKTENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSIRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGS 130
BLAST of Small ubiquitin-related modifier vs. Ensembl Cavefish
Match: sumo2b (small ubiquitin like modifier 2 [Source:NCBI gene;Acc:103044284]) HSP 1 Score: 107.071 bits (266), Expect = 2.586e-30 Identity = 48/78 (61.54%), Postives = 60/78 (76.92%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGG Sbjct: 16 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLTMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 93
BLAST of Small ubiquitin-related modifier vs. Ensembl Cavefish
Match: ENSAMXT00000052373.1 (small ubiquitin-related modifier 2-like [Source:NCBI gene;Acc:103045390]) HSP 1 Score: 72.7886 bits (177), Expect = 3.349e-17 Identity = 43/94 (45.74%), Postives = 53/94 (56.38%), Query Frame = 3 Query: 45 MAD---KEGTP----EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGS 305 MAD KEG EHIN+KV GQDG+V+ FKIK++T L KLM AYC+R L+ME+ DTI+VFQ QTGG+ Sbjct: 1 MADEKPKEGVKTENNEHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCER------------------------QLEMEDEDTIDVFQQQTGGA 70
BLAST of Small ubiquitin-related modifier vs. Ensembl Yeast
Match: SMT3 (Ubiquitin-like protein of the SUMO family; conjugated to lysine residues of target proteins; associates with transcriptionally active genes; regulates chromatid cohesion, chromosome segregation, APC-mediated proteolysis, DNA replication and septin ring dynamics; human homolog SUMO1 can complement yeast null mutant [Source:SGD;Acc:S000002918]) HSP 1 Score: 78.5666 bits (192), Expect = 5.415e-20 Identity = 43/97 (44.33%), Postives = 59/97 (60.82%), Query Frame = 3 Query: 33 EIFNMADKEGTPE-----HINVKVQGQDGAV-IHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGS 305 E+ A E PE HIN+KV DG+ I FKIKK T LR+LM A+ R G + ++RF++DG+ I+ +P LDME+ND IE + Q GG+ Sbjct: 5 EVNQEAKPEVKPEVKPETHINLKVS--DGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLYDGIRIQADQTPEDLDMEDNDIIEAHREQIGGA 99
BLAST of Small ubiquitin-related modifier vs. Ensembl Nematostella
Match: EDO45837 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RRX5]) HSP 1 Score: 74.3294 bits (181), Expect = 3.487e-18 Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 3 Query: 96 QDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 QD + +HFKIKK T L+KL AYCDR G++ ++VRF+FDG I + +P L+ME++D IEV+Q QTGG Sbjct: 7 QDNSEVHFKIKKTTQLKKLKAAYCDRQGVQMNSVRFLFDGQRINDDQTPKQLEMEDDDVIEVYQEQTGG 75
BLAST of Small ubiquitin-related modifier vs. Ensembl Medaka
Match: sumo2 (small ubiquitin-related modifier 2 [Source:NCBI gene;Acc:100335140]) HSP 1 Score: 112.849 bits (281), Expect = 1.450e-32 Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA 308 EHIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P+ L+ME+ DTI+VFQ QTGGS Sbjct: 13 EHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPSQLEMEDEDTIDVFQQQTGGSP 92
BLAST of Small ubiquitin-related modifier vs. Ensembl Medaka
Match: sumo2 (small ubiquitin-related modifier 2 [Source:NCBI gene;Acc:100335140]) HSP 1 Score: 112.464 bits (280), Expect = 1.862e-32 Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA 308 EHIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P+ L+ME+ DTI+VFQ QTGGS Sbjct: 16 EHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPSQLEMEDEDTIDVFQQQTGGSP 95
BLAST of Small ubiquitin-related modifier vs. Ensembl Medaka
Match: sumo2 (small ubiquitin like modifier 2 [Source:NCBI gene;Acc:100335143]) HSP 1 Score: 108.227 bits (269), Expect = 8.670e-31 Identity = 55/93 (59.14%), Postives = 66/93 (70.97%), Query Frame = 3 Query: 45 MAD---KEGTP----EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 MAD KEG EHIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGG Sbjct: 1 MADEKPKEGVKTENNEHINLKVAGQDGSVVQFKIKRHTPLIKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 93
BLAST of Small ubiquitin-related modifier vs. Ensembl Medaka
Match: sumo4 (small ubiquitin-related modifier 4 [Source:NCBI gene;Acc:100335145]) HSP 1 Score: 108.227 bits (269), Expect = 1.213e-30 Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = 3 Query: 54 KEGTPE-------HINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA 308 K TPE HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGG Sbjct: 10 KSETPEGVKTENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSIRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGKC 101
BLAST of Small ubiquitin-related modifier vs. Ensembl Medaka
Match: sumo4 (small ubiquitin-related modifier 4 [Source:NCBI gene;Acc:100335145]) HSP 1 Score: 107.457 bits (267), Expect = 1.565e-30 Identity = 48/80 (60.00%), Postives = 60/80 (75.00%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA 308 +HIN+KV GQDG+V+ FKIK++T L KLM AYC+R GL +RF FDG I ETD+P L+ME+ DTI+VFQ QTGG Sbjct: 15 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSIRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGKC 94
BLAST of Small ubiquitin-related modifier vs. Planmine SMEST
Match: SMESG000018835.1 (SMESG000018835.1) HSP 1 Score: 184.111 bits (466), Expect = 6.015e-61 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 3 Query: 45 MADKEGTPEHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA 308 MADKEGTPEHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA Sbjct: 1 MADKEGTPEHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGGSA 88
BLAST of Small ubiquitin-related modifier vs. Planmine SMEST
Match: SMESG000056595.1 (SMESG000056595.1) HSP 1 Score: 171.014 bits (432), Expect = 1.135e-55 Identity = 84/88 (95.45%), Postives = 85/88 (96.59%), Query Frame = 3 Query: 45 MAD--KEGTPEHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDSPTSLDMEENDTIEVFQSQTGG 302 MAD KEGT EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETD+PTSLDMEENDTIEVFQSQTGG Sbjct: 1 MADNNKEGTAEHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKTSTVRFIFDGVNIKETDTPTSLDMEENDTIEVFQSQTGG 88
BLAST of Small ubiquitin-related modifier vs. Planmine SMEST
Match: SMESG000026971.1 (SMESG000026971.1) HSP 1 Score: 48.1358 bits (113), Expect = 7.010e-7 Identity = 23/72 (31.94%), Postives = 42/72 (58.33%), Query Frame = 3 Query: 69 EHINVKVQGQDGAVIHFKIKKNTALRKLMNAYCDRLGLKT-STVRFIFDGVNIKETDSPTSLDMEENDTIEV 281 E IN+ Q DG + FK ++ +R M A+ R+G + ++FI++G +I ++P+SL+M + I+V Sbjct: 187 EWINLYFQFPDGHKMRFKTRRKAMMRHSMEAFSARMGYSSIHDLKFIYNGSDIYYNETPSSLNMASDALIQV 258 The following BLAST results are available for this feature:
BLAST of Small ubiquitin-related modifier vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Small ubiquitin-related modifier vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of Small ubiquitin-related modifier vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of Small ubiquitin-related modifier vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Small ubiquitin-related modifier vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Small ubiquitin-related modifier vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Small ubiquitin-related modifier vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Small ubiquitin-related modifier vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Small ubiquitin-related modifier vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Small ubiquitin-related modifier vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Small ubiquitin-related modifier vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Small ubiquitin-related modifier vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of Small ubiquitin-related modifier vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Small ubiquitin-related modifier vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 3
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30018755 ID=SMED30018755|Name=Small ubiquitin-related modifier|organism=Schmidtea mediterranea sexual|type=transcript|length=538bpback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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