Nipped-B protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30018721 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 11
Homology
BLAST of Nipped-B protein vs. Ensembl Human
Match: LEXM (lymphocyte expansion molecule [Source:HGNC Symbol;Acc:HGNC:26854]) HSP 1 Score: 144.05 bits (362), Expect = 1.034e-37 Identity = 120/393 (30.53%), Postives = 186/393 (47.33%), Query Frame = 3 Query: 45 SKSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGMQTSSN-----NNIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSVDYSTLNLNK---NVKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPA--HELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSYDVKFPQNIISHD-SAPPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDSK-YVNSHENIFKSKTGAQLTKEKFSML-SERLKP 1184 +K F+GAPFG QSHRFD++ V+P K T S+ ++IGPG Y +++ + FS+ KL + GW ++ + + +P+ + + K+ +++KLGPG Y++ L + + +G++S E RF PGPG YG+ G P+ EE N + + G++ N P G L P TY S + + G RGPYD FS +R+KP+ GH ++ EL + KS V+ LNS + K HG F K+ + P P +R YW N + P LA PQ + PPF +S + ++N VG GRY L ++K + ++F S + L+ ML ER+ P Sbjct: 21 TKWFTGAPFGVQSHRFDISAVYPNWKKFSTFTEAPYSTRYSTQVSHIGPGTYSSKE--TCFSKKKL-MKEVDTGWAKAQEATRLTQLPHFQYQAIMKEKRLKEQKLGPGSYNLKDFLEQLREKPCSTRGLLSSGEVRFRGLTGNYYPGPGNYGEKGNPYTKLEE--NAWNRSHSEGLMCRMSNKPHPRPHQGSGLGPGTYFFKSDLETYVARSVGTRGPYDTFSGDRSKPLPYGHYSMQKKKPRELM----NFKSFVEELNSHHNKKHGVFSKLPRNPKTPTERIYWANLSQCP----RTLATSGPSFWLPQEKKCKPVNQPPFLLTSKGSGAKACQMIMGSWNPVGVGRYLNTWLMETKDRRQRYRSLFLSGSKRYLSDLARDMLMQERITP 400
BLAST of Nipped-B protein vs. Ensembl Human
Match: LEXM (lymphocyte expansion molecule [Source:HGNC Symbol;Acc:HGNC:26854]) HSP 1 Score: 142.51 bits (358), Expect = 3.501e-37 Identity = 112/361 (31.02%), Postives = 172/361 (47.65%), Query Frame = 3 Query: 42 TSKSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGMQTSSN-----NNIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSVDYSTLNLNK---NVKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPA--HELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSYDVKFPQNIISHD-SAPPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDSK 1091 +K F+GAPFG QSHRFD++ V+P K T S+ ++IGPG Y +++ + FS+ KL + GW ++ + + +P+ + + K+ +++KLGPG Y++ L + + +G++S E RF PGPG YG+ G P+ EE N + + G++ N P G L P TY S + + G RGPYD FS +R+KP+ GH ++ EL + KS V+ LNS + K HG F K+ + P P +R YW N + P LA PQ + PPF +S + ++N VG GRY L ++K Sbjct: 20 ATKWFTGAPFGVQSHRFDISAVYPNWKKFSTFTEAPYSTRYSTQVSHIGPGTYSSKE--TCFSKKKL-MKEVDTGWAKAQEATRLTQLPHFQYQAIMKEKRLKEQKLGPGSYNLKDFLEQLREKPCSTRGLLSSGEVRFRGLTGNYYPGPGNYGEKGNPYTKLEE--NAWNRSHSEGLMCRMSNKPHPRPHQGSGLGPGTYFFKSDLETYVARSVGTRGPYDTFSGDRSKPLPYGHYSMQKKKPRELM----NFKSFVEELNSHHNKKHGVFSKLPRNPKTPTERIYWANLSQCP----RTLATSGPSFWLPQEKKCKPVNQPPFLLTSKGSGAKACQMIMGSWNPVGVGRYLNTWLMETK 367
BLAST of Nipped-B protein vs. Ensembl Xenopus
Match: ENSXETT00000045218.1 (lymphocyte expansion molecule [Source:NCBI gene;Acc:100491026]) HSP 1 Score: 232.261 bits (591), Expect = 4.649e-71 Identity = 154/404 (38.12%), Postives = 211/404 (52.23%), Query Frame = 3 Query: 39 MTSKSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGM------QTSSNNNIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSVDYSTLNLNKN----VKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSYDVKFPQNIISHDSAPPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDSKYVNSHENIFKSKTGAQLTK-EKFSMLSERLKPKNIPINKRHFI 1217 M K FSGAPFG QS RFD++ VHP K G+ + + +GPG Y E S FS S L+ +A P WKR+ TE+ ++MP++L K+ Y + K+ LGPG Y++ S L+L + ++GV S +E RF + + TPGPG YGK G P+ L EE KSAS+ G++ +LP+TGC L P TYNL S INE + H G RGPYD+FS +R +PI GH A PG Y KS + L S + K +G F + QYP P +R + N P + PG YD K P SA PF SS+ R +K S + + N VG GRYD+ + K + F SKT L+ + +L ERL+ K + + + Sbjct: 1 MAEKKFSGAPFGSQSARFDVSAVHPDSKKTGSYTQVPYCRRATSELERRLGPGTYNAEQ--SDFSPSVLEKNASAPAWKRAQETEKLTTMPHLLYKETYERNRLLKQNLGPGRYNIK-SFLDLLEKKPSCIRGVCSTKEERFKKNEQFCTPGPGSYGKGGNPYSLLEE--RVSKSASSKGIMDTSPGEGHSLPSTGCELGPGTYNLKSSINETLAHVVGNRGPYDLFSASREQPILYGHFAEPKNRGPEPGAYKVKSFTEDLESHHRKKYGVFGNLAQYPKVPTERIFINRPKTM-----GNPGPGLYDPK-PFYEPKRHSAAPFLSSAKRFEKKSCRLLFGSNNPVGVGRYDVAKHLRGKAATPLRSSFLSKTERYLSNPARDKILEERLRQKTVSATNKALL 393
BLAST of Nipped-B protein vs. Ensembl Mouse
Match: Lexm (lymphocyte expansion molecule [Source:MGI Symbol;Acc:MGI:2681853]) HSP 1 Score: 142.51 bits (358), Expect = 2.356e-37 Identity = 113/359 (31.48%), Postives = 174/359 (48.47%), Query Frame = 3 Query: 48 KSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGMQTSSNNN-----IGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSVDYSTLNLNK---NVKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHL-LKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAV--LPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSYDVKFPQNI-ISHDSAPPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDS 1088 K F GAPFG QSHRFD++ V+P +K T S +++ IGPG Y ++D + FS+ L+ GW +++ + + +P+ + + K++Q K GPG Y++ L K + +G++S E RF PGPG YG+ G P+ L+E+ N+ S + + N + L G L P TY + S + + +G RGPYDIFS R+ P+ GH +V + EL D KS +D +NS + K G F K + P P +R +W + P +++ PGS+ P H + PPF +S R + +N VG GRY L +S Sbjct: 19 KWFKGAPFGVQSHRFDVSAVYPNQKKFSTFTEAPYSRHHSVELSHIGPGTYNSKD--TCFSKKFLEQKLGS-GWSQAHEATRLTQLPHFHYQAIKKEKEQQVHKRGPGSYNIKDFITELQKKPQSKRGLLSSGETRFRGFIGNYYPGPGNYGEKGNPYTQLEEKAWNRSHSDGLMCRVSN----KPPLFHQGSGLGPGTYTIKSDLETFVKKSTGNRGPYDIFSGERSSPLPYGHYSVQKMKPKELT----DYKSFLDEMNSQHKKKQGVFSKYPRDPKHPTERIFWTTLSQCPKNMDI-AGPGSW---LPHETEQKHVNRPPFLLASKRCGLKAYQMILGTWNPVGVGRYLNTTLMES 362
BLAST of Nipped-B protein vs. Ensembl Mouse
Match: Lexm (lymphocyte expansion molecule [Source:MGI Symbol;Acc:MGI:2681853]) HSP 1 Score: 142.51 bits (358), Expect = 2.356e-37 Identity = 113/359 (31.48%), Postives = 174/359 (48.47%), Query Frame = 3 Query: 48 KSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGMQTSSNNN-----IGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSVDYSTLNLNK---NVKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHL-LKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAV--LPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSYDVKFPQNI-ISHDSAPPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDS 1088 K F GAPFG QSHRFD++ V+P +K T S +++ IGPG Y ++D + FS+ L+ GW +++ + + +P+ + + K++Q K GPG Y++ L K + +G++S E RF PGPG YG+ G P+ L+E+ N+ S + + N + L G L P TY + S + + +G RGPYDIFS R+ P+ GH +V + EL D KS +D +NS + K G F K + P P +R +W + P +++ PGS+ P H + PPF +S R + +N VG GRY L +S Sbjct: 19 KWFKGAPFGVQSHRFDVSAVYPNQKKFSTFTEAPYSRHHSVELSHIGPGTYNSKD--TCFSKKFLEQKLGS-GWSQAHEATRLTQLPHFHYQAIKKEKEQQVHKRGPGSYNIKDFITELQKKPQSKRGLLSSGETRFRGFIGNYYPGPGNYGEKGNPYTQLEEKAWNRSHSDGLMCRVSN----KPPLFHQGSGLGPGTYTIKSDLETFVKKSTGNRGPYDIFSGERSSPLPYGHYSVQKMKPKELT----DYKSFLDEMNSQHKKKQGVFSKYPRDPKHPTERIFWTTLSQCPKNMDI-AGPGSW---LPHETEQKHVNRPPFLLASKRCGLKAYQMILGTWNPVGVGRYLNTTLMES 362
BLAST of Nipped-B protein vs. Ensembl Mouse
Match: Lexm (lymphocyte expansion molecule [Source:MGI Symbol;Acc:MGI:2681853]) HSP 1 Score: 142.51 bits (358), Expect = 2.356e-37 Identity = 113/359 (31.48%), Postives = 174/359 (48.47%), Query Frame = 3 Query: 48 KSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGMQTSSNNN-----IGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSVDYSTLNLNK---NVKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHL-LKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAV--LPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSYDVKFPQNI-ISHDSAPPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDS 1088 K F GAPFG QSHRFD++ V+P +K T S +++ IGPG Y ++D + FS+ L+ GW +++ + + +P+ + + K++Q K GPG Y++ L K + +G++S E RF PGPG YG+ G P+ L+E+ N+ S + + N + L G L P TY + S + + +G RGPYDIFS R+ P+ GH +V + EL D KS +D +NS + K G F K + P P +R +W + P +++ PGS+ P H + PPF +S R + +N VG GRY L +S Sbjct: 19 KWFKGAPFGVQSHRFDVSAVYPNQKKFSTFTEAPYSRHHSVELSHIGPGTYNSKD--TCFSKKFLEQKLGS-GWSQAHEATRLTQLPHFHYQAIKKEKEQQVHKRGPGSYNIKDFITELQKKPQSKRGLLSSGETRFRGFIGNYYPGPGNYGEKGNPYTQLEEKAWNRSHSDGLMCRVSN----KPPLFHQGSGLGPGTYTIKSDLETFVKKSTGNRGPYDIFSGERSSPLPYGHYSVQKMKPKELT----DYKSFLDEMNSQHKKKQGVFSKYPRDPKHPTERIFWTTLSQCPKNMDI-AGPGSW---LPHETEQKHVNRPPFLLASKRCGLKAYQMILGTWNPVGVGRYLNTTLMES 362
BLAST of Nipped-B protein vs. UniProt/SwissProt
Match: sp|B1H283|LEXM_RAT (Lymphocyte expansion molecule OS=Rattus norvegicus OX=10116 GN=Lexm PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 2.563e-39 Identity = 114/351 (32.48%), Postives = 165/351 (47.01%), Query Frame = 3 Query: 48 KSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGMQTSSNNN-----IGPGYYITEDR--SSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSVDYSTLNLNK---NVKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPAHELAPGHYDS-KSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSYDVKFPQNI-ISHDSAPPFNSSSNRHDKLSNMFFYQNFNQVGPGRY 1064 K F GAPFG QSHRFD++ VHP +K T S +++ IGPG Y +++ S F + KL GW R+ + + +P+ + + +++Q K GPG Y++ L K + +G++S E RF PGPG YG+ G P+ E+ R + G++ + L G L P TY + S I + +G RGPYDIFS R+ P+ GH +V + P S KS VD LN+ + K G F K + P P +R YW + P D+ N PGS+ P H + PPF +S R + +N VG GRY Sbjct: 6 KWFKGAPFGVQSHRFDVSAVHPNQKKFSTFTEAPYSRHHSVELSHIGPGTYNSKETCFSKKFLEQKLGA-----GWARAQEASRLTQLPHFHFQAIKKEREQQANKRGPGSYNIKDFLTELQKKPQSKRGLLSSGETRFRGLIGNYYPGPGNYGEKGNPYTQLEKNSWNRSHSD--GLMCRLSSKPPPLSHQGSGLGPGTYTIKSDIETFVEKSTGTRGPYDIFSGERSSPVPYGHYSV---QKKKPRELTSFKSFVDELNAPHKKKQGGFSKYPRDPKHPTERIYWTTLSQCPKDV-NVAGPGSW---LPHETEQKHVNRPPFLLASKRSGLKACQMLLGTWNPVGVGRY 342
BLAST of Nipped-B protein vs. UniProt/SwissProt
Match: sp|Q3ZCV2|LEXM_HUMAN (Lymphocyte expansion molecule OS=Homo sapiens OX=9606 GN=LEXM PE=2 SV=4) HSP 1 Score: 144.05 bits (362), Expect = 4.964e-37 Identity = 120/393 (30.53%), Postives = 186/393 (47.33%), Query Frame = 3 Query: 45 SKSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGMQTSSN-----NNIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSVDYSTLNLNK---NVKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPA--HELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSYDVKFPQNIISHD-SAPPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDSK-YVNSHENIFKSKTGAQLTKEKFSML-SERLKP 1184 +K F+GAPFG QSHRFD++ V+P K T S+ ++IGPG Y +++ + FS+ KL + GW ++ + + +P+ + + K+ +++KLGPG Y++ L + + +G++S E RF PGPG YG+ G P+ EE N + + G++ N P G L P TY S + + G RGPYD FS +R+KP+ GH ++ EL + KS V+ LNS + K HG F K+ + P P +R YW N + P LA PQ + PPF +S + ++N VG GRY L ++K + ++F S + L+ ML ER+ P Sbjct: 21 TKWFTGAPFGVQSHRFDISAVYPNWKKFSTFTEAPYSTRYSTQVSHIGPGTYSSKE--TCFSKKKL-MKEVDTGWAKAQEATRLTQLPHFQYQAIMKEKRLKEQKLGPGSYNLKDFLEQLREKPCSTRGLLSSGEVRFRGLTGNYYPGPGNYGEKGNPYTKLEE--NAWNRSHSEGLMCRMSNKPHPRPHQGSGLGPGTYFFKSDLETYVARSVGTRGPYDTFSGDRSKPLPYGHYSMQKKKPRELM----NFKSFVEELNSHHNKKHGVFSKLPRNPKTPTERIYWANLSQCP----RTLATSGPSFWLPQEKKCKPVNQPPFLLTSKGSGAKACQMIMGSWNPVGVGRYLNTWLMETKDRRQRYRSLFLSGSKRYLSDLARDMLMQERITP 400
BLAST of Nipped-B protein vs. UniProt/SwissProt
Match: sp|A2AVQ5|LEXM_MOUSE (Lymphocyte expansion molecule OS=Mus musculus OX=10090 GN=Lexm PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.648e-36 Identity = 113/359 (31.48%), Postives = 174/359 (48.47%), Query Frame = 3 Query: 48 KSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGMQTSSNNN-----IGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSVDYSTLNLNK---NVKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHL-LKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAV--LPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSYDVKFPQNI-ISHDSAPPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDS 1088 K F GAPFG QSHRFD++ V+P +K T S +++ IGPG Y ++D + FS+ L+ GW +++ + + +P+ + + K++Q K GPG Y++ L K + +G++S E RF PGPG YG+ G P+ L+E+ N+ S + + N + L G L P TY + S + + +G RGPYDIFS R+ P+ GH +V + EL D KS +D +NS + K G F K + P P +R +W + P +++ PGS+ P H + PPF +S R + +N VG GRY L +S Sbjct: 19 KWFKGAPFGVQSHRFDVSAVYPNQKKFSTFTEAPYSRHHSVELSHIGPGTYNSKD--TCFSKKFLEQKLGS-GWSQAHEATRLTQLPHFHYQAIKKEKEQQVHKRGPGSYNIKDFITELQKKPQSKRGLLSSGETRFRGFIGNYYPGPGNYGEKGNPYTQLEEKAWNRSHSDGLMCRVSN----KPPLFHQGSGLGPGTYTIKSDLETFVKKSTGNRGPYDIFSGERSSPLPYGHYSVQKMKPKELT----DYKSFLDEMNSQHKKKQGVFSKYPRDPKHPTERIFWTTLSQCPKNMDI-AGPGSW---LPHETEQKHVNRPPFLLASKRCGLKAYQMILGTWNPVGVGRYLNTTLMES 362
BLAST of Nipped-B protein vs. TrEMBL
Match: A0A1I8HJX0 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig031511g1 PE=4 SV=1) HSP 1 Score: 362.073 bits (928), Expect = 4.225e-118 Identity = 195/423 (46.10%), Postives = 266/423 (62.88%), Query Frame = 3 Query: 48 KSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGMQTSSNNNIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSVDYST-LNLNKNVKGVMSEREPRFMEEY-KEITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGK--RGPYDIFSLNRTKPIKTGHLAVLPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSY---DVKFPQNIISHDSAPPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDSKYVNSHENIFKSKTGAQLTKEKFSMLSERLKPKNIPINKRHFIDHIPTESSPCVDLDKMLSHNQIPLTI 1295 K +SGAPFG+QS RFD++G+HPKRK+PGTL + + ++GPG Y + + FS ++ A+ P WKR+Y + S +P++L K+ + K+EQKRKLGPGYY V S L + +G++ REPRF +E PGPG YGK G+PHL KEE D +R+ +GML GG+ R P G L P TY +PSF + + ++GK RGPY++FSL+R +P+KTGH A + L PG Y+ K V LN ++HGKFLKM QYP KP DR YW PA VPPD N+++ SY D F + S A F S+SNR DK S MFF +NFNQVGPGRYD+QR +D+ +VN+H N F SKT A+L+ + + ERL+ K+IP +R +DH+ TE P V++ + + PL I Sbjct: 8 KGYSGAPFGFQSTRFDVSGIHPKRKLPGTLTQVPGGISADLGPGSYDVL-QYNEFSDKRVASRAQGPNWKRAYDVHRQSQIPHLLYKEQHAEKEEQKRKLGPGYYDVAGSQDYRLEVSKRGLLEAREPRFRGHTGQEGNPGPGSYGKSGVPHLHKEEMDEKRRHCGRVGMLDCGGS--RAPPQQGTDLGPGTYQIPSFTDLLAAKKAGKNSRGPYEVFSLDRDQPVKTGHYARMSTGNLGPGQYNFKDGVADLNRPEKRNHGKFLKMVQYPAKPCDRIYWMTPATVPPDPTNKVSAASYHPTDPNFKKESFSKSEA-GFLSTSNRQDKRSLMFFTKNFNQVGPGRYDIQRQEDTAHVNAHTNDFVSKTEARLSHGQQQVYRERLRDKDIPPGRRFRVDHVATEKEPFVNIQPLFAARD-PLVI 425
BLAST of Nipped-B protein vs. TrEMBL
Match: A0A1S3JSZ9 (lymphocyte expansion molecule OS=Lingula unguis OX=7574 GN=LOC106175621 PE=4 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 5.117e-88 Identity = 168/410 (40.98%), Postives = 242/410 (59.02%), Query Frame = 3 Query: 39 MTSKSFSGAPFGYQSHRFDLAGVHPKRKMPGTL-------IGMQTSSNNNIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSV-DY--STLNLNKNVKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSYDVKFPQNIISHDSAPPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDSKYVNSHENIFKSKTG-AQLTKEKFSMLSERLKPKNIPINKRHFIDHIPTE 1235 M K + GAPFG Q+ RFD++ VHPK KMPGT + M+ S N GPG Y E FS ++ A PGW R Y ++ ++MP++L+K+ + K+ KRKL PG Y++ D+ ++ +++ G+ + +EPRF TPGPG YG G+PH E+ + S ST+GML + R+LP G L P +YN SF ++ + RGPYD+FS R KPI TGHLAV H L PG YD KS VD + + K HGK K+ Q+PDKP +R + + P ++ PG+Y+ K +H+S P F SS+ R D+++ FF +NFN VG GRYD+Q+ +++++VN HE++FKSK+G L +E+F L ERL+ K++P +R FI IP E Sbjct: 1 MAEKKYKGAPFGTQTARFDVSAVHPKNKMPGTFTQTPYCRVSME-SLNRTRGPGKYAVE--VGGFSPKSVEERASGPGWARQYEVQRMAAMPHLLHKEQWELKRLLKRKLAPGTYNIKDFLETSDERPRSIYGICATKEPRFRNTVTNATPGPGTYGIGGVPHAALEQ--KEMASTSTVGMLDAVSSMPRSLPLVGSDLGPGSYNFESFTKQLERKVTSLRGPYDLFSGQRNKPITTGHLAVPTWHTLGPGQYDLKSFVDDWGTIHKKKHGKMGKVQQHPDKPSERILVSTLSQCPKEMGAP-GPGAYNAKEISKPQAHNS-PGFLSSARRDDRMAQKFFTRNFNPVGAGRYDVQKWEEAQHVNGHESVFKSKSGKISLKREQF--LKERLRAKDVPFKERVFI--IPPE 399
BLAST of Nipped-B protein vs. TrEMBL
Match: C3ZFQ3 (Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_124108 PE=4 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 8.667e-88 Identity = 162/406 (39.90%), Postives = 234/406 (57.64%), Query Frame = 3 Query: 39 MTSKSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGM------QTSSNNNIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSV---DYSTLNLNK--NVKGVMSEREPRFMEEYK-EITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPA-CVPPDINNQLAPGSYDVKFPQNIISHDSAPPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDSKYVNSHENIFKSKTGAQLTKEKFSMLSERLKPKNIPINKRHFI 1217 M K+F+GAPFG Q+ RFD+A VHPK K PGT + T +GPG Y +FSQ +++ A PGW+R+Y T++ +++P++LN+D + KQ QK+ LGPG Y V D+ K +V+G++ +E RF E K E TPGPG YGK GIP KEE ++SAS +G+L +G RTLP G LAP Y SF E+ + KRGPYD+F+ R KPI GH AV L PG Y+ KS + + H GKF K+ Q+P P DR Y + + C P+ PG++ K +H PPF SS+ R DK +N FF + N VGPGRY+++R + +++VN++ ++F SKT Q + ++ ++ER++ K++ + R FI Sbjct: 1 MAKKNFTGAPFGVQTARFDVAAVHPKSKKPGTFTQVPYDKYSTTELKRKLGPGVYEVYPIIGAFSQRQVEERADGPGWERAYETQRMAALPHLLNRDHWERKQRQKKMLGPGTYEVHALDFVNALDQKPASVRGIIQTKEQRFRERVKWEETPGPGTYGKGGIPAAAKEE--KAQESASRVGLLSSGAPSSRTLPIVGTDLAPGRYERKSFTEELSDRIVSKRGPYDLFTGERNKPITVGHFAVPKTTNLGPGEYELKSFLVKWADEHNTHKGKFSKLAQHPKIPGDRIYCHTLSQCPRPE--GTPGPGTHSPKEIPTASAHH-LPPFKSSAERFDKRANKFFLGSTNPVGPGRYEVRRWERAQHVNANSSVFNSKTSRQQSLDRKKFMNERIRMKDVRVPDRVFI 401
BLAST of Nipped-B protein vs. TrEMBL
Match: N1PB98 (Uncharacterized protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_226751 PE=4 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.196e-84 Identity = 167/407 (41.03%), Postives = 241/407 (59.21%), Query Frame = 3 Query: 39 MTSKSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGM------QTSSNNNIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSV-DYSTLNLNK--NVKGVMSEREPRFMEEYKEI--TPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAY-WNNPACVPPDINNQLAPGSYDVKFPQNIISH-DSAPPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDSKYVNSHENIFKSKT-GAQLTKEKFSMLSERLKPKNIPINKRHFI 1217 M K++ GAPFG Q+ RFD++G+HPK K PGT TS + +GPG Y + FS ++ A PGW R+Y ++ +++P++L+K + K+ K+KLGPG Y++ D+ + K + G++ +E RF E+ + TPGPG YG+ G+PH EE +KSASTIG+L G ER+LP G L P TY SF ++ + RGPYD+FS +R KPIKTGHLA + L PG Y KS VD ++ + + G+F KM+QYP+K DR Y ++ P P + PG Y+ K +ISH +P F SSS R DKLS FF N N VGPGRY +Q+L+D+++ N H ++FKSK+ + T+ KF L ER++ K++ +N R F+ Sbjct: 1 MADKNYKGAPFGVQTARFDVSGIHPKNKTPGTFTQTPYCKKSNTSLSCQLGPGRY--DIGLGGFSDKSVEERAGGPGWARAYEVQRLAALPHLLHKQQWELKRLLKKKLGPGSYNIKDFLEQSGEKPRSTLGIIHTKEERFKEKLTQAQETPGPGTYGEGGVPHAAVEE--KAKKSASTIGLLGASG-AERSLPTVGSGLGPGTYQFKSFTEKIDEKVTSLRGPYDLFSGDRNKPIKTGHLASVTNSNLGPGQYKIKSFVDDWSTEHKQRTGRFFKMEQYPEKAIDRIYSFSLPQN--PRNREEPGPGQYEPKMADQVISHAKKSPGFLSSSQRSDKLSTKFFTGNQNPVGPGRYVIQKLEDAQHRNGHTSVFKSKSLRPEHTRSKF--LQERIRSKDVAVNDRCFM 398
BLAST of Nipped-B protein vs. TrEMBL
Match: K1QH27 (Uncharacterized protein OS=Crassostrea gigas OX=29159 GN=CGI_10010076 PE=4 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 5.465e-83 Identity = 155/406 (38.18%), Postives = 233/406 (57.39%), Query Frame = 3 Query: 39 MTSKSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGMQTSS------NNNIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSV-DYSTLNLNK--NVKGVMSEREPRFMEEYKE-ITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSYDVKFPQNIISHDS--APPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDSKYVNSHENIFKSKTGA-QLTKEKFSMLSERLKPKNIPINKRHFI 1217 M K ++GAPFG Q+ RFD++GVHPK K PGT + N + PG Y + F++ +D A PGW R+Y E+ +++P++L+KD + K+ +RKL PG Y + D+ ++ K +++GV R+ RF E TPGPG YGK GIPH EE +KS ST+GML G + R LP+ G L P TYN SF E + + RGPYD+FS +R KPI G+LA +L PG Y+ KS VD + + GKF K++Q+P K +R + + P + PG+Y+ P+ + ++ +P F S++ R+D++S FF +NFN VG GRYD+Q+ ++ ++ N H ++F+SKTG EKF L ER++ K++ + R F+ Sbjct: 1 MAEKKYTGAPFGTQTARFDVSGVHPKSKYPGTFTEIPYDKKSIDELNRRLAPGSYKVD--VGGFNKKTVDERASGPGWARAYEVERMAALPHLLHKDQWELKRLLQRKLAPGSYDIKDFLQVSEEKPRSIRGVCQTRDQRFKENVAANETPGPGTYGKGGIPHSAVEE--KAKKSTSTVGMLDAGSSTPRNLPSVGSELGPGTYNFKSFTQEAVEKVTSLRGPYDLFSGDRNKPINDGYLAAPKLADLGPGQYELKSFVDDWKTEHRVRQGKFGKVEQHPRKGTERILCSTLSQCPKE-EGTPGPGTYE---PKQLSKPETKNSPGFLSTAQRNDRVSQRFFTRNFNPVGAGRYDVQKWEECQHKNGHGSVFQSKTGKLNAVMEKF--LKERVRAKDVQLKDRVFL 396
BLAST of Nipped-B protein vs. Ensembl Cavefish
Match: ENSAMXT00000013749.2 (lymphocyte expansion molecule [Source:NCBI gene;Acc:103032211]) HSP 1 Score: 142.51 bits (358), Expect = 1.375e-37 Identity = 124/415 (29.88%), Postives = 187/415 (45.06%), Query Frame = 3 Query: 39 MTSKSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGMQTSS------NNNIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSVDYSTLNLNK---NVKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNN-PACVPPDINNQLAPGSYDVK--FPQNIISHDSAPPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDSKYVNS-HENIFKSKTGA---QLTKEKFSMLSERLKPKNIPINKRHFIDHIPTE 1235 M K F GAPFG QSHRFD++GVHP K GT + N+GPG Y + S FS + + P WKR+ T + + +P++L +D + KQ K K+GPG Y + T L K +++G+ RE RF ++ + + GPGIY I ++ D ++K S G+ +R C P Y + + + + I S R K ++ L PG Y + L K HG F ++QYP P +R Y + P C P PG YDV P ++ PF SS++R K +N N VGPGRY+ + D + ++ H + F S T ++K++ ERL+P+N+ + R + +PTE Sbjct: 3 MAEKKFKGAPFGSQSHRFDVSGVHPANKRVGTYTQISCCKRRTSDLERNLGPGTYNPD--SGDFSARAVRERSMGPDWKRAQETARLAQIPHLLYRDAWANKQFLKTKVGPGTYKIPSFTEELKKKPSSLRGICETREERF-KDCQNTSVGPGIY---KITSFIE---DLEKKPGSPKGICET--REQRFKDFQSCTPGPGAYGKGGIPSASLEEKERRNRGNSIDSSARLKRFPEN---IVKRTNLGPGEYTKFG--EELQRPEKKKHGVFSSLEQYPSVPTERIYLSTLPQC--PRPMTFPGPGWYDVSPVTPSRQSRSETPAPFLSSASRFSKSMETLLNKNHNMVGPGRYE---IADKNWNSTGHSSAFISDTQRYPNCPARDKYNQ--ERLRPQNVSLEGRSSL--VPTE 392
BLAST of Nipped-B protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007365.1 (pep scaffold:Pmarinus_7.0:GL476565:113022:120666:1 gene:ENSPMAG00000006647.1 transcript:ENSPMAT00000007365.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 136.346 bits (342), Expect = 1.384e-36 Identity = 109/356 (30.62%), Postives = 157/356 (44.10%), Query Frame = 3 Query: 39 MTSKSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGM----QTSSNN--NIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSV-DYSTLNLNK--NVKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAY--WNNPACVPPDINNQLAPGSYDVKFPQNIISHDSAPPFNSSSNRHDKLSNMFFY--QNFNQVGPGRYD 1067 M F GAPFG + RF+++G+HP+ K GT QT SN +GPG Y E S F + A PGW R + + P+ +++ + ++ QK +LGPG Y D+ L + + +GV E RF+ K TPGPG Y + P G ++ G + + R+ P TG L P T+ SF +E+ RGPYD+F+ RT P++TG L + P S + L + G P +P +R W P PG+YD+ + S PPF SSS R + S+ F Q+ N VGPGRY+ Sbjct: 3 MPGVEFHGAPFGSATARFNVSGIHPQLKPLGTYTEAPYCSQTMSNQIRALGPGRYNPEC-SGGFGVRAVSRRASGPGWAREVELSRSARTPHFRHREAWEKERTQKSRLGPGIYDTKDFIDLERERPSSRRGVCDTLEERFLNIGKSSTPGPGSYVRPERP------GAAWAHHPASRGPMELSSSVNRSTPETGSGLGPGTHEHRSFTDELAARVVSARGPYDLFTGRRTDPLRTGWLVAPESLWPGPRGCPQPSMAEALAARTRCRIGTVGP----PKEPAERLMEQWVKAWSWP-------GPGTYDMNLEAREVRSASRPPFLSSSARFNSRSDRLFMGSQDQNPVGPGRYN 340
BLAST of Nipped-B protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007366.1 (pep scaffold:Pmarinus_7.0:GL476565:114349:120666:1 gene:ENSPMAG00000006647.1 transcript:ENSPMAT00000007366.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 124.405 bits (311), Expect = 4.512e-32 Identity = 102/340 (30.00%), Postives = 149/340 (43.82%), Query Frame = 3 Query: 87 RFDLAGVHPKRKMPGTLIGM----QTSSNN--NIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSV-DYSTLNLNK--NVKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAY--WNNPACVPPDINNQLAPGSYDVKFPQNIISHDSAPPFNSSSNRHDKLSNMFFY--QNFNQVGPGRYD 1067 RF+++G+HP+ K GT QT SN +GPG Y E S F + A PGW R + + P+ +++ + ++ QK +LGPG Y D+ L + + +GV E RF+ K TPGPG Y + P G ++ G + + R+ P TG L P T+ SF +E+ RGPYD+F+ RT P++TG L + P S + L + G P +P +R W P PG+YD+ + S PPF SSS R + S+ F Q+ N VGPGRY+ Sbjct: 29 RFNVSGIHPQLKPLGTYTEAPYCSQTMSNQIRALGPGRYNPEC-SGGFGVRAVSRRASGPGWAREVELSRSARTPHFRHREAWEKERTQKSRLGPGIYDTKDFIDLERERPSSRRGVCDTLEERFLNIGKSSTPGPGSYVRPERP------GAAWAHHPASRGPMELSSSVNRSTPETGSGLGPGTHEHRSFTDELAARVVSARGPYDLFTGRRTDPLRTGWLVAPESLWPGPRGCPQPSMAEALAARTRCRIGTVGP----PKEPAERLMEQWVKAWSWP-------GPGTYDMNLEAREVRSASRPPFLSSSARFNSRSDRLFMGSQDQNPVGPGRYN 350
BLAST of Nipped-B protein vs. Ensembl Nematostella
Match: EDO34936 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SMX3]) HSP 1 Score: 265.003 bits (676), Expect = 1.993e-84 Identity = 154/406 (37.93%), Postives = 231/406 (56.90%), Query Frame = 3 Query: 39 MTSKSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGM------QTSSNNNIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSV-DYSTLNLNK--NVKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSYDVKFPQNIISHDSA--PPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDSKYVNSHENIFKSKTGA-QLTKEKFSMLSERLKPKNI-PINKRHFI 1217 M K +SGAPFG Q+ RFD++ +HPK K PGT + T N +GPG Y E + F++ + A PGW+R+Y T + + +P++L K+ + KQ QKR LGPG Y++ D+ L K + +G R RF + PGPG YGK GIP+ + EE +RKS S +GML +G + R LP G L P Y + SF +E+ +H KRGPYD+F+ R KPI G+ A+ L PG YD KS + + + HGKFLK+ ++PD P +R Y + + P D ++ PGSY K ++ ++A PPF SS+ R D+ + FF + N VGPGRY + R +++++++ H F SKT L ++K+ M ER++ K++ P +K + + Sbjct: 1 MAQKKYSGAPFGVQTSRFDVSSIHPKSKTPGTFTQVPYDKKCMTEVNRRLGPGSYNIE--AGGFNKKSVLERASGPGWERAYETSRLAKIPHLLYKEQWEKKQYQKRMLGPGTYNIKDFMELMAEKPRSTRGECETRAARFESSTQSGVPGPGTYGKGGIPNAVLEE--KERKSVSNVGMLDSGKSYRRQLPEVGSHLCPGQYEMESFTDEMASHVVSKRGPYDLFTGERNKPITVGYFAMPLRQNLGPGEYDLKSFLSENTGEHKQRHGKFLKVTRFPDYPTERIYCCSLSQCPRD-PSEPGPGSYSAK---DLGKPEAAKRPPFGSSAGRMDRHARRFFLGSTNPVGPGRYSVDRYENAQHIDGHTGAFNSKTRRYDLIRDKYMM--ERIRAKDVRPEDKVYMV 396
BLAST of Nipped-B protein vs. Planmine SMEST
Match: SMESG000008990.1 (SMESG000008990.1) HSP 1 Score: 872.463 bits (2253), Expect = 0.000e+0 Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 3 Query: 39 MTSKSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGMQTSSNNNIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSVDYSTLNLNKNVKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSYDVKFPQNIISHDSAPPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDSKYVNSHENIFKSKTGAQLTKEKFSMLSERLKPKNIPINKRHFIDHIPTESSPCVDLDKMLSHNQIPLTIS 1298 MTSKSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGMQTSSNNNIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSVDYSTLNLNKNVKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSYDVKFPQNIISHDSAPPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDSKYVNSHENIFKSKTGAQLTKEKFSMLSERLKPKNIPINKRHFIDHIPTESSPCVDLDKMLSHNQIPLTIS Sbjct: 1 MTSKSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGMQTSSNNNIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSVDYSTLNLNKNVKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSYDVKFPQNIISHDSAPPFNSSSNRHDKLSNMFFYQNFNQVGPGRYDLQRLQDSKYVNSHENIFKSKTGAQLTKEKFSMLSERLKPKNIPINKRHFIDHIPTESSPCVDLDKMLSHNQIPLTIS 420
BLAST of Nipped-B protein vs. Planmine SMEST
Match: SMESG000051172.1 (SMESG000051172.1) HSP 1 Score: 222.631 bits (566), Expect = 9.298e-68 Identity = 137/399 (34.34%), Postives = 213/399 (53.38%), Query Frame = 3 Query: 54 FSGAPFGYQSHRFDLAGVHPKRKMPGTLIGMQTSSNNNIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYSVDYSTLNLNKN--VKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSYDVKFPQNIISHDSAPPFNSSSNRHDKLSNM-FFYQNFNQVGPGRYDLQRLQDSKYVNSHENIFKSKTGAQLTKEKFSMLSERLKPKNIPINKRHFIDHIPTESS 1241 S + FG +F G+HPK + + S N+GPG Y + + S S+++ + WK Y E+ ++PY L K+ + E+KR+LGPGYY V+ S L+K+ ++ + RF ++ K+ PGP YG IP + ++ D +RK A+++ +L GGN R + P YN+ S IN+V+NHQ+G+RG YD +L+R++PIKTGH A+L +H L PG Y+ + +D + + GKFL+ QYP+KPH R +W +P P D NQ++P SY++ I A F SS R +K + F +N +GPGRY+ + NS E+ FKS + +L R++P N+P K+ H+ TE+S Sbjct: 1 MSKSAFGSSVPKFTCYGIHPKLQSTNSF--YSKSVPPNVGPGSYNVKHQEKS-SKNRFSSEM----WKVQYKLEKQKTIPYFLIKEKKQTEAEKKRQLGPGYYEVEESMKKLSKDNHATTILQSKARRFSDDIKDCYPGPSTYG---IPQDIIDQADIRRKYANSVPLLDRGGNSNRLPTPPSFHIGPGIYNIESPINQVLNHQTGQRGYYDCNNLDRSQPIKTGHHAILVSHNLGPGQYNFGNEIDRFHDKFHCFKGKFLREKQYPEKPHQRVFWTDPGNTPVDKTNQVSPASYNLSQSLYKIGKSKA-GFGSSDIRMNKFALANFMGENNTLIGPGRYNCDSKGIGESGNSFESAFKSLVSKISDPKTIDVLRSRVRPINLPEMKKKKETHLATENS 388
BLAST of Nipped-B protein vs. Planmine SMEST
Match: SMESG000035257.1 (SMESG000035257.1) HSP 1 Score: 221.861 bits (564), Expect = 2.389e-67 Identity = 140/399 (35.09%), Postives = 209/399 (52.38%), Query Frame = 3 Query: 87 RFDLAGVHPKRKMPGTLIGMQTSSNNNIGPGYYITEDRSSSFSQSKLDLDAKKPGWKRSYATEQFSSMPYILNKDLYLAKQEQKRKLGPGYYS----VDYSTLNLNKNVKGVMSEREPRFMEEYKEITPGPGIYGKCGIPHLLKEEGDNQRKSASTIGMLHNGGNGERTLPATGCRLAPNTYNLPSFINEVINHQSGKRGPYDIFSLNRTKPIKTGHLAVLPAHELAPGHYDSKSSVDILNSSNYKHHGKFLKMDQYPDKPHDRAYWNNPACVPPDINNQLAPGSYDVKFPQN------IISHDSAPPFNSSSNRHDKLSNMFFYQNFNQ-VGPGRYDLQRLQDSKYVNSHENIFKSKTGAQLTKEKFSMLSERLKPKNIPINKRHFIDHIPTESSPCV 1250 RF G+HP G + G+ TS + +GPG Y +S F + KLD + K W+R+ EQ +P+ ++K LY K+EQKR++GPG Y DYS +K + + RF+E K+ PGPG YGK GIP K E D +RK +T+G+L GG R + P Y + S I+E + H +G R YD S + P+K GH A+L H++ PG Y K + LN + GKFL+ QYP KPH+R ++ +PA PPD NQ++ SY +P+N + PFN SS R DK++ F N GPGRY++ + S+++++ F +KT ++ + ++ ER + +N+ NK +DH+ T S C Sbjct: 17 RFIQYGIHPNAMEKGKM-GI-TSVDGELGPGKYDLS-YTSCFDEKKLDKSSFKSDWRRALFLEQQGKIPHFMSKYLYKEKEEQKRRMGPGKYEYKSIFDYSN---DKKYTTSLKSKSRRFVEAKKDSFPGPGTYGKFGIPDQKKYEADQRRKHCNTVGLLKRGGKSGRNFFNNINNIGPGIYQVKSVIDESLKHHTGLRNFYDCNSDEKLLPLKFGHRAILKPHDIGPGQYQHKEFITELNDRFHIFKGKFLQELQYPPKPHERVFYIDPANTPPDPRNQVSTHSY---YPRNPNYRKCVSFGGKTYPFNFSSLRMDKIALENFTGNRTPFTGPGRYNIDKADASRHISAATASFNAKTPQTSSEFQLKVIRERNRGRNLIRNKEDKLDHLATTKSVCF 406 The following BLAST results are available for this feature:
BLAST of Nipped-B protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 2
BLAST of Nipped-B protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Nipped-B protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of Nipped-B protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of Nipped-B protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of Nipped-B protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 3
BLAST of Nipped-B protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 3
BLAST of Nipped-B protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Nipped-B protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of Nipped-B protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 2
BLAST of Nipped-B protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Nipped-B protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of Nipped-B protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of Nipped-B protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 3
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30018721 ID=SMED30018721|Name=Nipped-B protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1410bpback to top protein sequence of SMED30018721-orf-1 >SMED30018721-orf-1 ID=SMED30018721-orf-1|Name=SMED30018721-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=421bp MTSKSFSGAPFGYQSHRFDLAGVHPKRKMPGTLIGMQTSSNNNIGPGYYIback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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