Tetraspanin

Overview


Name	Tetraspanin
Smed ID	SMED30018665
Length (bp)	950

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Tetraspanin (SMED30018665) t-SNE clustered cells

Violin plots show distribution of expression levels for Tetraspanin (SMED30018665) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Tetraspanin (SMED30018665) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Tetraspanin (SMED30018665) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30018665

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 13

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
parapharyngeal region	SMED30018665	h1SMcG0012537	SmedASXL_068049	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
Smed sexual biotype	SMED30018665	h1SMcG0012537	Contig37877	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30018665	h1SMcG0012537	Contig37877	newmark_ests	PMID:29674431 Fincher et al., 2018
nervous system	SMED30018665	h1SMcG0012537	dd_Smed_v4_12033_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30018665	h1SMcG0012537	dd_Smed_v4_12033_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30018665	h1SMcG0012537	dd_Smed_v4_12033_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchyma	SMED30018665	h1SMcG0012537	dd_Smed_v4_12033_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30018665	h1SMcG0012537	dd_Smed_v4_12033_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
non-ciliated neuron	SMED30018665	h1SMcG0012537	dd_Smed_v4_12033_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cilated neuron	SMED30018665	h1SMcG0012537	dd_Smed_v4_12033_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
pharynx	SMED30018665	h1SMcG0012537	Contig37877	uc_Smed_v2	PMID:27612384 Roberts-Galbraith et al., 2016
pharynx	SMED30018665	h1SMcG0012537	Contig37877	newmark_ests	PMID:27612384 Roberts-Galbraith et al., 2016
zeta neoblast	SMED30018665	h1SMcG0012537	dd_Smed_v4_12033_0_1	dd_Smed_v4	PMID:28292427 Wurtzel et al., 2017

Note: Hover over icons to view figure legend

Homology

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BLAST of Tetraspanin vs. Ensembl Human
Match: CD82 (CD82 molecule [Source:HGNC Symbol;Acc:HGNC:6210])

HSP 1 Score: 70.8626 bits (172), Expect = 1.668e-13
Identity = 39/139 (28.06%), Postives = 74/139 (53.24%), Query Frame = 2

Query:  470 FNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSC---CESDIESELRSCFNEQK--------------YYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHSTV 835
            +NS+   +L++A DY+Q   +CCG  ++ NW ++   ++R +  +  P SC    E D    +R  F E                 Y+ GC ++++ +L+  + II+GV +G+A+ E+L +V ++CLC +  +  +S V
Sbjct:  128 YNSSREDSLQDAWDYVQAQVKCCGWVSFYNWTDNAELMNRPE--VTYPCSCEVKGEEDNSLSVRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQENLGIILGVGVGVAIIELLGMVLSICLCRHVHSEDYSKV 264

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BLAST of Tetraspanin vs. Ensembl Human
Match: CD82 (CD82 molecule [Source:HGNC Symbol;Acc:HGNC:6210])

HSP 1 Score: 70.4774 bits (171), Expect = 1.790e-13
Identity = 39/139 (28.06%), Postives = 74/139 (53.24%), Query Frame = 2

Query:  470 FNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSC---CESDIESELRSCFNEQK--------------YYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHSTV 835
            +NS+   +L++A DY+Q   +CCG  ++ NW ++   ++R +  +  P SC    E D    +R  F E                 Y+ GC ++++ +L+  + II+GV +G+A+ E+L +V ++CLC +  +  +S V
Sbjct:  103 YNSSREDSLQDAWDYVQAQVKCCGWVSFYNWTDNAELMNRPE--VTYPCSCEVKGEEDNSLSVRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQENLGIILGVGVGVAIIELLGMVLSICLCRHVHSEDYSKV 239

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BLAST of Tetraspanin vs. Ensembl Human
Match: CD63 (CD63 molecule [Source:HGNC Symbol;Acc:HGNC:1692])

HSP 1 Score: 68.1662 bits (165), Expect = 2.781e-13
Identity = 37/114 (32.46%), Postives = 60/114 (52.63%), Query Frame = 2

Query:  458 NYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            NYP  N T++      +D +Q  F+CCG   Y +WE     +S+N      P SCC  ++       FNE+  +K GC +++  +L+  + ++    +GIA  E+L +VFA CL
Sbjct:   43 NYPKNNHTAS-----ILDRMQADFKCCGAANYTDWEKIP-SMSKN----RVPDSCC-INVTVGCGINFNEKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAFVEVLGIVFACCL 145

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Query:  458 NYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            NYP  N T++      +D +Q  F+CCG   Y +WE     +S+N      P SCC  ++       FNE+  +K GC +++  +L+  + ++    +GIA  E+L +VFA CL
Sbjct:   43 NYPKNNHTAS-----ILDRMQADFKCCGAANYTDWEKIP-SMSKN----RVPDSCC-INVTVGCGINFNEKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAFVEVLGIVFACCL 145

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BLAST of Tetraspanin vs. Ensembl Human
Match: CD63 (CD63 molecule [Source:HGNC Symbol;Acc:HGNC:1692])

HSP 1 Score: 67.781 bits (164), Expect = 2.805e-13
Identity = 37/114 (32.46%), Postives = 60/114 (52.63%), Query Frame = 2

Query:  458 NYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            NYP  N T++      +D +Q  F+CCG   Y +WE     +S+N      P SCC  ++       FNE+  +K GC +++  +L+  + ++    +GIA  E+L +VFA CL
Sbjct:   32 NYPKNNHTAS-----ILDRMQADFKCCGAANYTDWE-KIPSMSKN----RVPDSCC-INVTVGCGINFNEKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAFVEVLGIVFACCL 134

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BLAST of Tetraspanin vs. Ensembl Celegans
Match: tsp-15 (Tetraspanin-15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVM9])

HSP 1 Score: 48.9062 bits (115), Expect = 1.505e-6
Identity = 31/112 (27.68%), Postives = 53/112 (47.32%), Query Frame = 2

Query:  470 FNSTSNQNLKNAIDYIQKTFRCCGVKTYKN---WENSTWYISRNDSFMETPSSCCESDIESELRSC----FNEQK---YYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEIL 775
            + +   + +  + D +Q  F+CCGV    N   W+ S WY+ +    +  P SCC   I SE+  C    F++     YY   C + L+N L + M +   + I  A+ +I+
Sbjct:  136 YGTHDMKGITESWDALQSNFKCCGVNGTDNAQIWKTSKWYMHQRAPKLLIPESCC---IPSEIERCRSNPFDQDAPPPYYTSTCYEPLQNDLLHVMNVASWLCITNAIVQII 244

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BLAST of Tetraspanin vs. Ensembl Fly
Match: Tsp39D (gene:FBgn0032943 transcript:FBtr0273404)

HSP 1 Score: 57.3806 bits (137), Expect = 2.671e-9
Identity = 37/116 (31.90%), Postives = 56/116 (48.28%), Query Frame = 2

Query:  470 FNSTSNQNLKNAIDY------IQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            FNST  Q+ K   DY      +Q    CCG+    +WE     + RN +    P++CC     SE + C N     + GC  +L   L  K  I+  V++G+A  ++L ++FA CL
Sbjct:  118 FNSTM-QHYKERADYRDAWTLLQTELDCCGINGPNDWET----VYRNSTL---PAACCSVINLSEAKECTNTHAT-QHGCLQKLLEILDSKTLILASVVLGVAGIQMLTILFACCL 224

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BLAST of Tetraspanin vs. Ensembl Fly
Match: Tsp47F (gene:FBgn0033629 transcript:FBtr0088151)

HSP 1 Score: 55.0694 bits (131), Expect = 1.593e-8
Identity = 87/252 (34.52%), Postives = 134/252 (53.17%), Query Frame = 2

Query:   80 CGAKFSKYTVFLFNILFWITGLIFIVLGSIYLT-TGGFKSFEE--VITPNDRYFTRLMYXXXXXXXXXXXXXXXXXXXAIRESRXXXXXXXXXXXXXXXXXXSCGIYATXXXXXXXXXXXXXXXXXXXXNYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESD-IESELRSCF-----NEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNN 808
            CG    KY +F FN+LF I+GL  ++ G++ L     F  F E  V+ P           +I  G I+F++   GC GAI+ES  LL T+ VLL +I IVE++ GI A+V +K++   ++ SL++SI          SN     A D IQ+   CCGV +  +W      +S N +    P SCC+   I+S +  C       + KY+++GC  +L++ ++    I++GV IGIA  +IL +V A  L N+
Sbjct:    4 CGPSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPP--------IVLIVTGLIIFLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESI--------KRSNSEDTMAWDNIQQKLMCCGVDSPADWRT----LSANKTL---PGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANS 232

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BLAST of Tetraspanin vs. Ensembl Fly
Match: Tsp96F (gene:FBgn0027865 transcript:FBtr0330164)

HSP 1 Score: 52.373 bits (124), Expect = 1.478e-7
Identity = 71/262 (27.10%), Postives = 124/262 (47.33%), Query Frame = 2

Query:   98 KYTVFLFNILFWITGLIFIVLGSIYLTTGGFKSFEEVITPNDRYFTRLMYXXXXXXXXXXXXXXXXXXXAIRESRXXXXXXXXXXXXXXXXXXSCGIYATXXXXXXXXXXXXXXXXXXXXNYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTW-----------YISRNDSFMETPSSCCESDI---ESELRSCFN-----EQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQH 826
            KY + L NILFW+ GL  IV+ S+++ T    +F   +T N  ++   +Y  + +G ++ +  F GCCG  RES+ LL ++  ++L++M+ +I+ G +A   + ++   +  +++ S+ + Y     +S        D +QK  +CCG     +W  S +            +S  + F   P SCC+ ++   E EL              Y+ GC D+L   +      I  V   + L E+L + FA+ LC    N QH
Sbjct:   11 KYLMVLINILFWLIGLT-IVVTSVWMLTD--PTFMLSMTQNYNHYHIALYVFLAIGILITLGAFFGCCGVCRESQCLLVSFFCVILIVMVAQIAAGAWAFHNKDKLDDIVRAAVKSSVQEEYGQSTMSSR---TVTFDTLQKNLKCCGADGPGDWATSRFNNVDRTNIVEIAVSSMNVFYNIPESCCKDNLKDNECELSRRLKFGGPLNNAIYQQGCVDKLIEIIYENWVTIFAVTAAVILLELLSLTFALSLCCAVRN-QH 265

[Close]

BLAST of Tetraspanin vs. Ensembl Fly
Match: Tsp96F (gene:FBgn0027865 transcript:FBtr0084912)

HSP 1 Score: 52.373 bits (124), Expect = 1.478e-7
Identity = 71/262 (27.10%), Postives = 124/262 (47.33%), Query Frame = 2

Query:   98 KYTVFLFNILFWITGLIFIVLGSIYLTTGGFKSFEEVITPNDRYFTRLMYXXXXXXXXXXXXXXXXXXXAIRESRXXXXXXXXXXXXXXXXXXSCGIYATXXXXXXXXXXXXXXXXXXXXNYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTW-----------YISRNDSFMETPSSCCESDI---ESELRSCFN-----EQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQH 826
            KY + L NILFW+ GL  IV+ S+++ T    +F   +T N  ++   +Y  + +G ++ +  F GCCG  RES+ LL ++  ++L++M+ +I+ G +A   + ++   +  +++ S+ + Y     +S        D +QK  +CCG     +W  S +            +S  + F   P SCC+ ++   E EL              Y+ GC D+L   +      I  V   + L E+L + FA+ LC    N QH
Sbjct:   11 KYLMVLINILFWLIGLT-IVVTSVWMLTD--PTFMLSMTQNYNHYHIALYVFLAIGILITLGAFFGCCGVCRESQCLLVSFFCVILIVMVAQIAAGAWAFHNKDKLDDIVRAAVKSSVQEEYGQSTMSSR---TVTFDTLQKNLKCCGADGPGDWATSRFNNVDRTNIVEIAVSSMNVFYNIPESCCKDNLKDNECELSRRLKFGGPLNNAIYQQGCVDKLIEIIYENWVTIFAVTAAVILLELLSLTFALSLCCAVRN-QH 265

[Close]

BLAST of Tetraspanin vs. Ensembl Fly
Match: Tsp96F (gene:FBgn0027865 transcript:FBtr0330163)

HSP 1 Score: 51.9878 bits (123), Expect = 2.037e-7
Identity = 72/262 (27.48%), Postives = 123/262 (46.95%), Query Frame = 2

Query:   98 KYTVFLFNILFWITGLIFIVLGSIYLTTGGFKSFEEVITPNDRYFTRLMYXXXXXXXXXXXXXXXXXXXAIRESRXXXXXXXXXXXXXXXXXXSCGIYATXXXXXXXXXXXXXXXXXXXXNYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTW-----------YISRNDSFMETPSSCCES---DIESELRSCFN-----EQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQH 826
            KY + L NILFW+ GL  IV+ S+++ T    +F   +T N  ++   +Y  + +G ++ +  F GCCG  RES+ LL ++  ++L++M+ +I+ G +A   + ++   +  +++ S+ + Y     +S        D +QK  +CCG     +W  S +            +S  + F   P SCC+    D E EL              Y+ GC D+L   +      I  V   + L E+L + FA+ LC    N QH
Sbjct:   11 KYLMVLINILFWLIGLT-IVVTSVWMLTD--PTFMLSMTQNYNHYHIALYVFLAIGILITLGAFFGCCGVCRESQCLLVSFFCVILIVMVAQIAAGAWAFHNKDKLDDIVRAAVKSSVQEEYGQSTMSSR---TVTFDTLQKNLKCCGADGPGDWATSRFNNVDRTNIVEIAVSSMNVFYNIPESCCKDNLKDNECELSRRLKFGGPLNNAIYQQGCVDKLIEIIYENWVTIFAVTAAVILLELLSLTFALSLCCAVRN-QH 265

[Close]

BLAST of Tetraspanin vs. Ensembl Zebrafish
Match: cd151l (CD151 antigen, like [Source:ZFIN;Acc:ZDB-GENE-040426-1868])

HSP 1 Score: 65.4698 bits (158), Expect = 7.414e-12
Identity = 32/112 (28.57%), Postives = 57/112 (50.89%), Query Frame = 2

Query:  470 FNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKM--GCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            +N +  +++  A+D +Q+ F+CCG  +  +W +S W  S        P SCC+S +        +    YK+  GC  +L N++   + II  V +G+A  +I+ + F  CL
Sbjct:  134 YNQSEQEHVTKAVDKLQQEFKCCGSNSSSDWVDSAWIRSSEADGRLVPDSCCKSPVRKFCGRRDHPSNIYKVEGGCITKLENFILNHLQIIGAVGVGVASVQIVGMFFTCCL 245

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BLAST of Tetraspanin vs. Ensembl Zebrafish
Match: cd82a (CD82 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-2818])

HSP 1 Score: 62.7734 bits (151), Expect = 5.325e-11
Identity = 35/133 (26.32%), Postives = 71/133 (53.38%), Query Frame = 2

Query:  458 NYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESEL-------RSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHSTV 835
            NYP  N T+ Q    A DY+Q+T +CCG     +W+ +  +I +N++    P SC    I++ +       ++  ++   Y+ GC + + ++L     II+G+ +G+A+ E+L ++ ++ LC +     ++ V
Sbjct:  127 NYPGQNKTAEQ----AWDYLQRTMQCCGWNGRMDWDEN--HIIKNNTVPLYPCSCHNYSIQAPIVPDNGFCQASSSDWPIYQTGCLEHVGSWLFTNYGIILGICLGVAVIELLGMILSMGLCKSVHQEDYTKV 253

[Close]

Query:  458 NYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESEL-------RSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHSTV 835
            NYP  N T+ Q    A DY+Q+T +CCG     +W+ +  +I +N++    P SC    I++ +       ++  ++   Y+ GC + + ++L     II+G+ +G+A+ E+L ++ ++ LC +     ++ V
Sbjct:  127 NYPGQNKTAEQ----AWDYLQRTMQCCGWNGRMDWDEN--HIIKNNTVPLYPCSCHNYSIQAPIVPDNGFCQASSSDWPIYQTGCLEHVGSWLFTNYGIILGICLGVAVIELLGMILSMGLCKSVHQEDYTKV 253

[Close]

Query:  458 NYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESEL-------RSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHSTV 835
            NYP  N T+ Q    A DY+Q+T +CCG     +W+ +  +I +N++    P SC    I++ +       ++  ++   Y+ GC + + ++L     II+G+ +G+A+ E+L ++ ++ LC +     ++ V
Sbjct:  127 NYPGQNKTAEQ----AWDYLQRTMQCCGWNGRMDWDEN--HIIKNNTVPLYPCSCHNYSIQAPIVPDNGFCQASSSDWPIYQTGCLEHVGSWLFTNYGIILGICLGVAVIELLGMILSMGLCKSVHQEDYTKV 253

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BLAST of Tetraspanin vs. Ensembl Zebrafish
Match: tspan3a (tetraspanin 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7787])

HSP 1 Score: 62.003 bits (149), Expect = 1.145e-10
Identity = 34/119 (28.57%), Postives = 60/119 (50.42%), Query Frame = 2

Query:  461 YPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYI-SRNDSFMETPSSCCESDIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFA-VCLCNNT 811
            Y  +N T+      AIDY+Q+   CCG+  + +W N+ W+  S+N+S    P SCC+ ++ +   S  +    Y  GC + +   LK  M  ++   +  A  ++L ++ A V LC  +
Sbjct:  123 YNEYNGTNTDAPSRAIDYVQRQLHCCGITNFADWRNTRWFKESKNNS---VPLSCCKPNVSNCTGSLLHPGDLYPEGCEELVVKKLKEIMMYVIWAALTFAAIQMLGMLCACVVLCRRS 238

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BLAST of Tetraspanin vs. Ensembl Xenopus
Match: sertad4 (SERTA domain containing 4 [Source:Xenbase;Acc:XB-GENE-943347])

HSP 1 Score: 68.1662 bits (165), Expect = 1.004e-12
Identity = 35/124 (28.23%), Postives = 64/124 (51.61%), Query Frame = 2

Query:  470 FNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRN--DSFMETPSSCCESDIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHSTV 835
            +N+T +     A+D IQ+T +CCGV +Y  W  + +Y +     S    P +C E+D++   ++     K +K GC   +   ++ +M ++ G+  GIA F+++ +  A CL     N Q+  V
Sbjct:  133 YNATGDPR-SQAVDTIQRTLQCCGVNSYNEWGQTQYYKTHGIPQSCCRVPGNCSEADMKDLGKA---GGKVFKQGCISLVTTVMESRMGVVAGISFGIACFQLVGMFLACCLSRYITNNQYEMV 252

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BLAST of Tetraspanin vs. Ensembl Xenopus
Match: tspan7 (tetraspanin 7 [Source:NCBI gene;Acc:394976])

HSP 1 Score: 65.0846 bits (157), Expect = 1.040e-11
Identity = 37/113 (32.74%), Postives = 61/113 (53.98%), Query Frame = 2

Query:  473 NSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIE---SELRS-CFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            N   N     A+D +Q++ RCCGV+ Y NW  S ++   +  F   PSSCC +  +    +LR+   N  K  + GC + + ++++  M II GV  GIA  +++ ++ A CL
Sbjct:  116 NYNGNDERSQAVDDVQRSLRCCGVQYYTNWTTSLYW--HDHGF---PSSCCANTSDCNPQDLRNMTINFTKVNQRGCYELVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCL 223

[Close]

BLAST of Tetraspanin vs. Ensembl Xenopus
Match: tspan7 (tetraspanin 7 [Source:NCBI gene;Acc:394976])

HSP 1 Score: 65.4698 bits (158), Expect = 1.047e-11
Identity = 39/125 (31.20%), Postives = 64/125 (51.20%), Query Frame = 2

Query:  473 NSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIE---SELRS-CFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHSTV 835
            N   N     A+D +Q++ RCCGV+ Y NW  S ++   +  F   PSSCC +  +    +LR+   N  K  + GC + + ++++  M II GV  GIA  +++ ++ A CL       Q+  V
Sbjct:  130 NYNGNDERSQAVDDVQRSLRCCGVQYYTNWTTSLYW--HDHGF---PSSCCANTSDCNPQDLRNMTINFTKVNQRGCYELVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCLSRFITANQYEMV 249

[Close]

BLAST of Tetraspanin vs. Ensembl Xenopus
Match: cd82 (CD82 molecule [Source:NCBI gene;Acc:394799])

HSP 1 Score: 65.0846 bits (157), Expect = 1.566e-11
Identity = 35/125 (28.00%), Postives = 64/125 (51.20%), Query Frame = 2

Query:  470 FNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFN---EQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHSTV 835
            +    N + +   DYIQ   RCCG   Y+NW  +T      +S  + P SC ++         +N   E   Y+ GC   + ++L+  + II+GV +G+A+ E+L ++ ++CLC +  +  ++ V
Sbjct:  144 YEDGKNTSAETTWDYIQTNLRCCGWTNYQNWTANT---VVQNSTNQYPCSCMKNQSSPNGFCQYNGTVESAVYQTGCMQGVESWLQDNLGIILGVCVGVAVIELLGLILSMCLCRSIQSEDYTKV 265

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BLAST of Tetraspanin vs. Ensembl Xenopus
Match: cd82 (CD82 molecule [Source:NCBI gene;Acc:394799])

HSP 1 Score: 64.6994 bits (156), Expect = 1.875e-11
Identity = 35/125 (28.00%), Postives = 64/125 (51.20%), Query Frame = 2

Query:  470 FNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFN---EQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHSTV 835
            +    N + +   DYIQ   RCCG   Y+NW  +T      +S  + P SC ++         +N   E   Y+ GC   + ++L+  + II+GV +G+A+ E+L ++ ++CLC +  +  ++ V
Sbjct:  131 YEDGKNTSAETTWDYIQTNLRCCGWTNYQNWTANT---VVQNSTNQYPCSCMKNQSSPNGFCQYNGTVESAVYQTGCMQGVESWLQDNLGIILGVCVGVAVIELLGLILSMCLCRSIQSEDYTKV 252

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BLAST of Tetraspanin vs. Ensembl Mouse
Match: Tspan7 (tetraspanin 7 [Source:MGI Symbol;Acc:MGI:1298407])

HSP 1 Score: 67.3958 bits (163), Expect = 1.553e-12
Identity = 33/113 (29.20%), Postives = 57/113 (50.44%), Query Frame = 2

Query:  473 NSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFN----EQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            N   N     A+D++Q++  CCGV+ Y NW +S +++         P SCC ++ +       N      K  + GC D + ++++  M II GV  GIA  +++ ++ A CL
Sbjct:  130 NYNGNDERSRAVDHVQRSLSCCGVQNYTNWSSSPYFLDHG-----IPPSCCMNETDCNPLDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCL 237

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BLAST of Tetraspanin vs. Ensembl Mouse
Match: Tspan7 (tetraspanin 7 [Source:MGI Symbol;Acc:MGI:1298407])

HSP 1 Score: 63.929 bits (154), Expect = 1.608e-11
Identity = 31/105 (29.52%), Postives = 52/105 (49.52%), Query Frame = 2

Query:  473 NSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFN----EQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEIL 775
            N   N     A+D++Q++  CCGV+ Y NW +S +++         P SCC ++ +       N      K  + GC D + ++++  M II GV  GIA  ++L
Sbjct:  130 NYNGNDERSRAVDHVQRSLSCCGVQNYTNWSSSPYFLDHG-----IPPSCCMNETDCNPLDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQVL 229

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BLAST of Tetraspanin vs. Ensembl Mouse
Match: Cd151 (CD151 antigen [Source:MGI Symbol;Acc:MGI:1096360])

HSP 1 Score: 62.7734 bits (151), Expect = 6.364e-11
Identity = 29/112 (25.89%), Postives = 59/112 (52.68%), Query Frame = 2

Query:  470 FNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKM--GCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            ++ + ++ + +A+D +Q+ F CCG    ++W++S W  S        P SCC++ +    +   +    YK+  GC  +L  +++  + +I  V IGIA  ++  ++F  CL
Sbjct:  134 YHQSGHEGVSSAVDKLQQEFHCCGSNNSQDWQDSEWIRSGEADSRVVPDSCCKTMVAGCGKR-DHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFGMIFTCCL 244

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Query:  470 FNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKM--GCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            ++ + ++ + +A+D +Q+ F CCG    ++W++S W  S        P SCC++ +    +   +    YK+  GC  +L  +++  + +I  V IGIA  ++  ++F  CL
Sbjct:  134 YHQSGHEGVSSAVDKLQQEFHCCGSNNSQDWQDSEWIRSGEADSRVVPDSCCKTMVAGCGKR-DHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFGMIFTCCL 244

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Query:  470 FNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKM--GCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            ++ + ++ + +A+D +Q+ F CCG    ++W++S W  S        P SCC++ +    +   +    YK+  GC  +L  +++  + +I  V IGIA  ++  ++F  CL
Sbjct:  134 YHQSGHEGVSSAVDKLQQEFHCCGSNNSQDWQDSEWIRSGEADSRVVPDSCCKTMVAGCGKR-DHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFGMIFTCCL 244

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BLAST of Tetraspanin vs. UniProt/SwissProt
Match: sp|P27701|CD82_HUMAN (CD82 antigen OS=Homo sapiens OX=9606 GN=CD82 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.011e-13
Identity = 39/139 (28.06%), Postives = 74/139 (53.24%), Query Frame = 2

Query:  470 FNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSC---CESDIESELRSCFNEQK--------------YYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHSTV 835
            +NS+   +L++A DY+Q   +CCG  ++ NW ++   ++R +  +  P SC    E D    +R  F E                 Y+ GC ++++ +L+  + II+GV +G+A+ E+L +V ++CLC +  +  +S V
Sbjct:  128 YNSSREDSLQDAWDYVQAQVKCCGWVSFYNWTDNAELMNRPE--VTYPCSCEVKGEEDNSLSVRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQENLGIILGVGVGVAIIELLGMVLSICLCRHVHSEDYSKV 264

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BLAST of Tetraspanin vs. UniProt/SwissProt
Match: sp|P08962|CD63_HUMAN (CD63 antigen OS=Homo sapiens OX=9606 GN=CD63 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.447e-12
Identity = 37/114 (32.46%), Postives = 60/114 (52.63%), Query Frame = 2

Query:  458 NYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            NYP  N T++      +D +Q  F+CCG   Y +WE     +S+N      P SCC  ++       FNE+  +K GC +++  +L+  + ++    +GIA  E+L +VFA CL
Sbjct:  125 NYPKNNHTAS-----ILDRMQADFKCCGAANYTDWEKIP-SMSKN----RVPDSCC-INVTVGCGINFNEKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAFVEVLGIVFACCL 227

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BLAST of Tetraspanin vs. UniProt/SwissProt
Match: sp|Q7YQL0|TSN7_PANTR (Tetraspanin-7 OS=Pan troglodytes OX=9598 GN=TSPAN7 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.825e-12
Identity = 32/110 (29.09%), Postives = 56/110 (50.91%), Query Frame = 2

Query:  482 SNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFN----EQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
             N     A+D++Q++  CCGV+ Y NW  S +++         P SCC ++ +   +   N      K  + GC D + ++++  M II GV  GIA  +++ ++ A CL
Sbjct:  128 GNDERSRAVDHVQRSLSCCGVQNYTNWSTSPYFLEHG-----IPPSCCMNETDCNPQDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCL 232

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BLAST of Tetraspanin vs. UniProt/SwissProt
Match: sp|P41732|TSN7_HUMAN (Tetraspanin-7 OS=Homo sapiens OX=9606 GN=TSPAN7 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 1.025e-11
Identity = 32/110 (29.09%), Postives = 56/110 (50.91%), Query Frame = 2

Query:  482 SNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFN----EQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
             N     A+D++Q++  CCGV+ Y NW  S +++         P SCC ++ +   +   N      K  + GC D + ++++  M II GV  GIA  +++ ++ A CL
Sbjct:  133 GNDERSRAVDHVQRSLSCCGVQNYTNWSTSPYFLEHG-----IPPSCCMNETDCNPQDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCL 237

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BLAST of Tetraspanin vs. UniProt/SwissProt
Match: sp|Q62283|TSN7_MOUSE (Tetraspanin-7 OS=Mus musculus OX=10090 GN=Tspan7 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 1.086e-11
Identity = 33/113 (29.20%), Postives = 57/113 (50.44%), Query Frame = 2

Query:  473 NSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFN----EQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            N   N     A+D++Q++  CCGV+ Y NW +S +++         P SCC ++ +       N      K  + GC D + ++++  M II GV  GIA  +++ ++ A CL
Sbjct:  130 NYNGNDERSRAVDHVQRSLSCCGVQNYTNWSSSPYFLDHG-----IPPSCCMNETDCNPLDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCL 237

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BLAST of Tetraspanin vs. TrEMBL
Match: A0A3M6V1C7 (Tetraspanin OS=Pocillopora damicornis OX=46731 GN=pdam_00012072 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.856e-16
Identity = 40/116 (34.48%), Postives = 64/116 (55.17%), Query Frame = 2

Query:  467 PFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTG 814
             +     +    AID  Q+   CCGV +  +W+NS WY  ++D     P SCC+   +   +   N    Y+ GCS  L++++K KM ++ G+ +GIA+ +IL VVFA+CL  + G
Sbjct:  128 DYGQEDKKRFTEAIDKAQQELMCCGVSSGADWKNSAWY-KKSDKSESVPESCCKKMTDGCSKG--NSSNIYQEGCSQALQDFVKSKMAVVGGIGVGIAILQILGVVFAICLFRSIG 240

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BLAST of Tetraspanin vs. TrEMBL
Match: A0A3S1CDQ5 (Tetraspanin OS=Elysia chlorotica OX=188477 GN=EGW08_002351 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.764e-15
Identity = 85/260 (32.69%), Postives = 140/260 (53.85%), Query Frame = 2

Query:   74 IGCGAKFSKYTVFLFNILFWITGLIFIVLGSIYLTTGGFKSFEEVI---TPNDRYFTRLMYXXXXXXXXXXXXXXXXXXXAIRESRXXXXXXXXXXXXXXXXXXSCGIYATXXXXXXXXXXXXXXXXXXXXNYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCC---ESDIESELRSCFNEQKYY-KMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHST 832
            +GC +  ++  +  FN +FW++G   + +G   +     + ++EVI   T +D++     Y +IG G  VF+VGFCGCCGAIR S+ L+G YI+ L+L+   E++ GIY  +   +   K++  L KSI +NY      S   + +A D +QK   CCG   Y +++NSTW  S+ D  +  P SCC     +I      C   + YY   GC +++ ++L     I++GV  GIA  +I+  + AVC C +    ++ +
Sbjct:    1 MGCCSGLARMLLITFNFIFWLSGAAILAVGIWIIVDPEIEDYQEVISDATNDDQFLNTAAYILIGFGAFVFLVGFCGCCGAIRSSKCLIGLYIMFLVLVFAGELAAGIYVAIYSNDASDKLDDGLTKSIQENYK-----SGSKVASAWDVVQKELECCGGNGYGDYDNSTWMASQTDGQL-MPLSCCVLGTDNIPKNATLCQMAKDYYWTDGCREQIEDWLDEHSRILIGVACGIAALQIIGFICAVCFCRHMDKEKYQS 254

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BLAST of Tetraspanin vs. TrEMBL
Match: A0A2B4S9Q7 (Tetraspanin OS=Stylophora pistillata OX=50429 GN=CD151 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 3.866e-15
Identity = 41/115 (35.65%), Postives = 63/115 (54.78%), Query Frame = 2

Query:  470 FNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTG 814
            +     Q L  AID  Q+   CCGV +  +W+ S W+ S +D     P SCC+       +   N    Y+ GCS  L++++K KM ++ G+ +GIA+ +IL VVFA+CL  + G
Sbjct:  129 YGEKDKQKLTEAIDKAQQELMCCGVSSGADWKTSQWFNS-SDKSESVPESCCKKMAAGCSKG--NSPSIYQEGCSQALQDFVKSKMAVVGGIGVGIAILQILGVVFAICLFRSIG 240

[Close]

BLAST of Tetraspanin vs. TrEMBL
Match: A0A091VU43 (Tetraspanin (Fragment) OS=Nipponia nippon OX=128390 GN=Y956_15834 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.076e-13
Identity = 45/139 (32.37%), Postives = 75/139 (53.96%), Query Frame = 2

Query:  458 NYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCES--DIESELRSC-----------FNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHSTV 835
            NY P+N+  ++NL++A DY+Q    CCG    K+WEN+   I  N S    P SC  S  DI++E R C           + +   ++ GC D +  +LK  + +I+GV  G+A+ E+L ++ ++ LC N  +  ++ V
Sbjct:  110 NYDPWNN-DDRNLQDAWDYVQTQISCCGWTGAKDWENNKILI--NQSMTLYPCSCSNSSKDIQAESRFCNLDVPVNGTATYADWPVHEQGCMDGVEKWLKDNLGVILGVCTGVAVIELLGMILSISLCKNIHSEDYTKV 245

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BLAST of Tetraspanin vs. TrEMBL
Match: A0A091W6R2 (Tetraspanin (Fragment) OS=Opisthocomus hoazin OX=30419 GN=N306_15158 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.286e-13
Identity = 43/139 (30.94%), Postives = 71/139 (51.08%), Query Frame = 2

Query:  458 NYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSC-------------CESDIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHSTV 835
            NY P N    +NL++A DY+Q    CCG    K+WEN+   I+R  S    P SC             C+ D+     + + +   ++ GC D + N+LK  + II+GV  G+A+ E+L ++ ++ LC N  +  ++ V
Sbjct:  115 NYDPLND-DKRNLQDAWDYVQTQIACCGWSGAKDWENNEILINR--SMTAYPCSCSNISKGFQVDSGFCDLDVPVNGTATYADWPVHEQGCMDGVENWLKDNLGIILGVCTGVAVVELLGMILSISLCKNIHSEDYTKV 250

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BLAST of Tetraspanin vs. Ensembl Cavefish
Match: cd82b (CD82 antigen-like [Source:NCBI gene;Acc:107197274])

HSP 1 Score: 68.5514 bits (166), Expect = 4.517e-13
Identity = 40/124 (32.26%), Postives = 64/124 (51.61%), Query Frame = 2

Query:  485 NQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDI------ESEL-RSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHSTV 835
            N+  ++A DY+QKT +CCG     NW  + W   +N S +  P SC    I      ES L +S   E   Y  GC   + ++L     +I+GV +G+A+ E+L ++ ++CLC +     +S V
Sbjct:  132 NKTTEHAWDYLQKTIQCCGWTGPSNWTENVWI--KNSSQILYPCSCRNESIPGSEVQESGLCQSLVPEWPVYTKGCMSSVEDWLLSNCGVILGVCVGVAVLELLGMMLSMCLCKSVQQEDYSKV 253

[Close]

BLAST of Tetraspanin vs. Ensembl Cavefish
Match: tspan11 (tetraspanin-11-like [Source:NCBI gene;Acc:103024246])

HSP 1 Score: 65.855 bits (159), Expect = 3.786e-12
Identity = 77/236 (32.63%), Postives = 121/236 (51.27%), Query Frame = 2

Query:   98 KYTVFLFNILFWITGLIFIVLGSIYLTTGGFKSFEEVITPNDRYFTRLMYXXXXXXXXXXXXXXXXXXXAIRESRXXXXXXXXXXXXXXXXXXSCGIYATXXXXXXXXXXXXXXXXXXXXNYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKM--GCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            KY +F+FN LFW+ G + + +G   L   G    E +       F    Y +I  G +V V GF GCC  IRE R LL TY   LLLI ++E+  G+ A V  + +  ++++ L K++ +NY   +    + +  A+D +Q+ F+CCG     +W++S +  S        P SCC++ I  E     +    YK+  GC  +L ++L   + II  V IG+A  +I  +VF  CL
Sbjct:   18 KYLLFVFNFLFWMGGGVVMAVGIWTLIDKG----EYLSLLASSTFAVSAYILILAGALVMVTGFLGCCAVIREQRSLLSTYFSCLLLIFLIELVAGVLAYVYYQRLSEELKQHLSKTMTENY---DQLGKEGITRAVDRLQQDFKCCGSNNSSDWKHSVYVQSPEAQGRVVPDSCCKT-ITPECGRRDHPSNIYKVEGGCITKLEHFLADHLLIIGAVGIGVACLQICGMVFTCCL 245

[Close]

BLAST of Tetraspanin vs. Ensembl Cavefish
Match: cd151 (CD151 antigen-like [Source:NCBI gene;Acc:103041246])

HSP 1 Score: 64.3142 bits (155), Expect = 1.381e-11
Identity = 74/243 (30.45%), Postives = 127/243 (52.26%), Query Frame = 2

Query:   80 CGAKFSKYTVFLFNILFWITGLIFIVLGSIYLTTGGFKSFEEVITPNDRYFTRLMYXXXXXXXXXXXXXXXXXXXAIRESRXXXXXXXXXXXXXXXXXXSCGIYATXXXXXXXXXXXXXXXXXXXXNYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIES-ELRSCFNEQKYYKM--GCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            CG    KY +F FN+LFW++G   + +G   L        + +   +   ++   Y +I  G IV + G  GCC  I+ESR LL  + VLLLLI ++EI+ G+ A V  +E+  ++   L++++++ Y         ++  A+D +Q+  +CCG  +  +W+  TW  +  D  +  P SCC++  +   LR   +    YK+  GC  +L  ++   + I+  V IGIA  +IL ++F  CL
Sbjct:   10 CGTICLKYLLFTFNLLFWLSGGAVMAVGLWTLV----DKSDYISLLSSSTYSLAAYILIAAGAIVMLTGVLGCCATIKESRALLIVFFVLLLLIFLLEITAGVLAYVYYQELNEELRADLKETMVQKY---QQPGEDHVTRAVDKLQQDLKCCGSNSSADWQQGTWIHTFADGRL-VPDSCCKTPTDHCGLRD--HPSNIYKVEGGCISKLEEFILQHLQILGAVGIGIAFLQILGMLFTCCL 242

[Close]

BLAST of Tetraspanin vs. Ensembl Cavefish
Match: tspan3a (tetraspanin 3 [Source:NCBI gene;Acc:103046031])

HSP 1 Score: 61.6178 bits (148), Expect = 9.145e-11
Identity = 36/116 (31.03%), Postives = 59/116 (50.86%), Query Frame = 2

Query:  461 YPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWY-ISRNDSFMETPSSCCESDIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFA-VCLC 802
            Y  +N T++     AIDY+Q+   CCG+  Y +W N++W+  SRN+S    P SCC+ ++ +   S       Y  GC   +   LK  M  ++   +  A  ++L ++ A V LC
Sbjct:   99 YNEYNGTNSDAPSRAIDYVQRQLHCCGITNYLDWRNTSWFNESRNNS---VPLSCCKPNVSNCTGSLSRPGDLYPEGCEALVVKKLKEIMMYVIWAALTFAAIQMLGMLCACVVLC 211

[Close]

BLAST of Tetraspanin vs. Ensembl Cavefish
Match: tspan11 (tetraspanin-11-like [Source:NCBI gene;Acc:103024246])

HSP 1 Score: 62.003 bits (149), Expect = 1.059e-10
Identity = 74/235 (31.49%), Postives = 118/235 (50.21%), Query Frame = 2

Query:   98 KYTVFLFNILFWITGLIFIVLGSIYLTTGGFKSFEEVITPNDRYFTRLMYXXXXXXXXXXXXXXXXXXXAIRESRXXXXXXXXXXXXXXXXXXSCGIYATXXXXXXXXXXXXXXXXXXXXNYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKM--GCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVC 796
            KY +F+FN LFW+ G + + +G   L   G    E +       F    Y +I  G +V V GF GCC  IRE R LL TY   LLLI ++E+  G+ A V  + +  ++++ L K++ +NY   +    + +  A+D +Q+ F+CCG     +W++S +  S        P SCC++ I  E     +    YK+  GC  +L ++L   + II  V IG+A  ++   V   C
Sbjct:   18 KYLLFVFNFLFWMGGGVVMAVGIWTLIDKG----EYLSLLASSTFAVSAYILILAGALVMVTGFLGCCAVIREQRSLLSTYFSCLLLIFLIELVAGVLAYVYYQRLSEELKQHLSKTMTENY---DQLGKEGITRAVDRLQQDFKCCGSNNSSDWKHSVYVQSPEAQGRVVPDSCCKT-ITPECGRRDHPSNIYKVEGGCITKLEHFLADHLLIIGAVGIGVACLQLAGAVLTAC 244

[Close]

BLAST of Tetraspanin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005284.1 (pep scaffold:Pmarinus_7.0:GL480552:16638:25636:-1 gene:ENSPMAG00000004798.1 transcript:ENSPMAT00000005284.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 73.9442 bits (180), Expect = 1.466e-15
Identity = 85/261 (32.57%), Postives = 138/261 (52.87%), Query Frame = 2

Query:   68 MAIGCGAKFSKYTVFLFNILFWITGLIFIVLGSI-YLTTGGFKSFEEVITPNDRYFTRLMYXXXXXXXXXXXXXXXXXXXAIRESRXXXXXXXXXXXXXXXXXXSCGIYATXXXXXXXXXXXXXXXXXXXXNYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENST-WYISRNDSFMETPSSCCESDI----ESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHST 832
            MA+  G    KY V LFN+LFW++GL  I++G++  +  G F     V+T N    +   Y II +G ++FVV   GCCGA +ES  ++ T+ V L LI + E++ GI A    K+ +R + ++  K +I +YP  N       K+ +D +QK  +CCGV  Y++W NST W  S  ++    P SCC +      + ++R        Y  GC ++L   +K  + ++ GV IGI   +++ ++ A CL     N+  + 
Sbjct:    9 MALEGGMACIKYLVLLFNLLFWLSGLGLIIVGAMAQMHIGAF----SVVTGN---LSGAPYVIIAVGVVIFVVAAFGCCGAHKESYFMVATFSVFLFLIFVAELAAGIGA-YIFKDQLRDVVETKAKVVINDYPTKN-------KDPVDNMQKELQCCGVVHYQDWFNSTNWVTSDPNNPNSVPDSCCLNVTSGCGQDDIRFKNATAIIYTKGCVEKLEATMKENIVLVGGVAIGIGFAQLIGIILACCLMRGIKNSYQAV 254

[Close]

BLAST of Tetraspanin vs. Ensembl Sea Lamprey
Match: CD151 (CD151 molecule (Raph blood group) [Source:HGNC Symbol;Acc:HGNC:1630])

HSP 1 Score: 63.5438 bits (153), Expect = 1.474e-12
Identity = 32/111 (28.83%), Postives = 57/111 (51.35%), Query Frame = 2

Query:  470 FNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKY-YKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            +     + + +A+D +Q+ F+CCG K Y++W +S +  S   +    P SCC++   S  +       Y  + GC  +L  +L   + II  V IG+A  ++L ++F  CL
Sbjct:   42 YQQDQQERVTSAVDKLQQEFKCCGSKNYQDWASSRYIRSAASNDRLVPDSCCKTRTPSCGKRTHPSNIYNVEGGCITKLEKFLSDHLLIIGAVGIGVACLQVLGMIFTCCL 152

[Close]

BLAST of Tetraspanin vs. Ensembl Sea Lamprey
Match: CD151 (CD151 molecule (Raph blood group) [Source:HGNC Symbol;Acc:HGNC:1630])

HSP 1 Score: 61.6178 bits (148), Expect = 2.448e-11
Identity = 68/241 (28.22%), Postives = 118/241 (48.96%), Query Frame = 2

Query:   80 CGAKFSKYTVFLFNILFWITGLIFIVLGSIYLTTGGFKSFEEVITPNDRYFTRLMYXXXXXXXXXXXXXXXXXXXAIRESRXXXXXXXXXXXXXXXXXXSCGIYATXXXXXXXXXXXXXXXXXXXXNYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCES-DIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            CG    KY + +FN +FW+TG   + +G   L   G   +  ++  +   F    Y +I  G +V + G  GCC  +RE R  L  Y  LLLLI ++E+  GI A +  +++  +++  + K+I+++Y        Q + +A+D +Q+ F+CCG   + +W+ S W           P SCC+S       R   +     + GC  +L   L+  + +I  V IG+A  ++L ++   CL
Sbjct:   12 CGTVCLKYVLLVFNFIFWLTGAGVMAVGVWTLVEKG--DYLSLLASST--FAATAYILILAGSVVMLTGLLGCCAVVRERRGCLAAYCGLLLLIFLLEVIAGILAYLYRQQLSEELKSHMNKTIVESY---GQPDQQRVTDAMDKLQQEFKCCGSHDWNDWQRSDWVKVAAAEGRLVPDSCCKSPTTRCGRRDHPSNINRVEGGCITKLEVILQEHLLLIGAVGIGVACLQVLGMILTCCL 245

[Close]

BLAST of Tetraspanin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009492.1 (pep scaffold:Pmarinus_7.0:GL476618:258874:270129:-1 gene:ENSPMAG00000008573.1 transcript:ENSPMAT00000009492.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 59.6918 bits (143), Expect = 1.149e-10
Identity = 27/97 (27.84%), Postives = 50/97 (51.55%), Query Frame = 2

Query:  500 NAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFA 790
             A+DY+QK  +CCG   Y +W  + W  +R   +   P SCC+   ++         K Y+ GC  +L + ++  +  ++GV +G A  +++ +V A
Sbjct:  136 RAVDYMQKELQCCGFANYSDWNTTEW--ARRHKYNSVPLSCCKRSAKNCTGLLSLPAKLYQQGCLLKLGDEVQQILTYLIGVAVGFAFLQVMGLVAA 230

[Close]

BLAST of Tetraspanin vs. Ensembl Sea Lamprey
Match: tspan17 (tetraspanin 17 [Source:ZFIN;Acc:ZDB-GENE-030131-3673])

HSP 1 Score: 56.6102 bits (135), Expect = 1.454e-9
Identity = 33/122 (27.05%), Postives = 59/122 (48.36%), Query Frame = 2

Query:  491 NLKNAIDYIQKTFRCCGVKTYKNWENSTWY----ISRNDSFMETPSSCCESDIESE-----------LRSCFNEQKY-YKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNN 808
            +L+N ID+ Q  ++CCG     +W+ + ++     +R+      P SCC  D   +           L++  ++Q Y Y  GC  +   +L+  + ++ G+ IGIAL +I    F +CL  N
Sbjct:  124 DLQNLIDFAQDYWQCCGAHGPLDWDENIYFNCSIKNRSREKCGVPFSCCVKDPAEDVVNTQCGYDVRLKTELDQQSYIYTKGCVTQFEKWLQNNLILVAGIFIGIALVQI----FGICLAQN 241

[Close]

BLAST of Tetraspanin vs. Ensembl Nematostella
Match: EDO46887 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RNN8])

HSP 1 Score: 66.2402 bits (160), Expect = 9.649e-13
Identity = 33/113 (29.20%), Postives = 60/113 (53.10%), Query Frame = 2

Query:  470 FNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQ--KYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLC 802
            ++ + +  +  AID I + F+CCG   Y++W  + W  +  D     P SCC+   +S+     ++   K Y+ GC   ++ YL   + +I G  I IA+ +++ ++FA CLC
Sbjct:  119 YHLSGHDAVTRAIDEIHRDFKCCGNAQYRDWFETKWAKTHPDM---VPRSCCKDPSDSKCNENISKDPTKIYRRGCYMFVKKYLSNNLHVISGFGIWIAVIQLMGIIFATCLC 228

[Close]

BLAST of Tetraspanin vs. Ensembl Nematostella
Match: EDO35917 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SK24])

HSP 1 Score: 63.929 bits (154), Expect = 7.225e-12
Identity = 79/241 (32.78%), Postives = 132/241 (54.77%), Query Frame = 2

Query:   80 CGAKFSKYTVFLFNILFWITGLIFIVLGSIYLTTGGFKSFEEVITPNDRYFTRLMYXXXXXXXXXXXXXXXXXXXAIRESRXXXXXXXXXXXXXXXXXXSCGIYATXXXXXXXXXXXXXXXXXXXXNYPPFNSTSNQNLKNAIDYIQKTFRCCGV-KTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            CG +  KY +F FN +FWI G+  + +G I+       + E         FT     +I  G +V  +GF GCCGA++E++  L  Y  LLL+I ++EI+ GI A  K  +V+  +EK+L +SI  +Y   N    +    A+D  Q  F+CCG  +  K+W N+ W  +++++    P SCC+        +  +   YY+ GCS  L++++K  M  + G+ +GIA+ +IL ++F++CL
Sbjct:    4 CGMQCMKYLLFAFNFVFWIAGIAVMSVG-IWTRV---SANEYASLMGQSGFTAAANIMIAAGALVMFIGFVGCCGAVKENKCFLLLYFFLLLVIFVLEIASGILAYTKRDKVISSVEKALNQSISLDYGQSN---KEKATKAVDRAQSIFKCCGATQGPKDWANTAW--AKSNTNQTVPESCCKKKAAGCNGAPADSDTYYQKGCSQGLQDFIKSHMKTLGGIGLGIAIIQILGMIFSLCL 235

[Close]

BLAST of Tetraspanin vs. Ensembl Nematostella
Match: EDO30837 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SZN5])

HSP 1 Score: 60.4622 bits (145), Expect = 9.632e-11
Identity = 36/126 (28.57%), Postives = 62/126 (49.21%), Query Frame = 2

Query:  458 NYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYY------KMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGN 817
            +YP       Q  K+A + +QK  +CCG + Y +W    W    N      P SCC+   +++++SC  E   +      + GC      Y + K+ II GV +G+A+F+++ + F+ CL +   N
Sbjct:  128 DYP------EQGFKDAWNDMQKNLKCCGSRNYTDWFMVAW-AGPNTKNGSVPESCCK---DTKVKSCNLEVLSHPETINSEQGCYGAAVKYFEDKLVIIGGVALGLAVFQLIGIAFSCCLASTLHN 243

[Close]

BLAST of Tetraspanin vs. Ensembl Nematostella
Match: EDO47592 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RLE8])

HSP 1 Score: 59.6918 bits (143), Expect = 1.909e-10
Identity = 38/116 (32.76%), Postives = 62/116 (53.45%), Query Frame = 2

Query:  467 PFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTG 814
             +     + + +A D IQK  +CCG+  +K+W+ S +Y   N S +  P SCC++ +       F E   Y  GC D ++  LK  + II G+ IG+A+ +IL ++FA+ L    G
Sbjct:  125 SYGEKGKEGITDAYDAIQKKEKCCGINGFKDWQRS-YYTKGNHSIV--PDSCCKT-VSKGCGINFKENDIYTKGCFDTVKTLLKDNLIIIGGIGIGVAVIQILAMIFAMVLVCKIG 236

[Close]

BLAST of Tetraspanin vs. Ensembl Nematostella
Match: EDO38288 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SDC9])

HSP 1 Score: 59.3066 bits (142), Expect = 2.854e-10
Identity = 33/115 (28.70%), Postives = 56/115 (48.70%), Query Frame = 2

Query:  482 SNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWY--ISRNDSFMETPSSCCESDI----------ESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFA 790
             N +L+N ID +Q+ F+CCG K   +W+ + ++   S        P SCC  D           +S   +    +  +  GC + ++++ K  M II G  +GIAL +I+ + FA
Sbjct:  130 DNADLQNLIDGVQQEFKCCGAKGINDWDKNIYFNCSSPGSEACGVPYSCCIKDTINRQCGYGIRKSGTPTSDQSKIIFIGGCVNAVKDWFKSNMIIIGGAAVGIALLQIMGICFA 244

[Close]

BLAST of Tetraspanin vs. Ensembl Medaka
Match: tspan7b (tetraspanin 7 [Source:NCBI gene;Acc:101163366])

HSP 1 Score: 69.3218 bits (168), Expect = 2.452e-13
Identity = 41/126 (32.54%), Postives = 61/126 (48.41%), Query Frame = 2

Query:  470 FNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCC--ESDIES-ELR-SCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHSTV 835
             N  +      A+DY+Q   RCCGV  Y +W  S +Y ++       P SCC   SD  S +LR +     K Y  GC D + ++++  M II GV  GIA  +++ ++ A CL       Q+  V
Sbjct:  124 LNYNTQDEASRAVDYLQNKLRCCGVYNYTSWFASVYYPAKG-----IPPSCCFNSSDCSSDDLRNATVAPSKVYHQGCFDLVTSFMETNMAIIAGVTFGIAFSQLIGMLLACCLSRIITANQYEMV 244

[Close]

BLAST of Tetraspanin vs. Ensembl Medaka
Match: tspan7 (tetraspanin 6 [Source:NCBI gene;Acc:101163337])

HSP 1 Score: 67.0106 bits (162), Expect = 1.505e-12
Identity = 37/124 (29.84%), Postives = 60/124 (48.39%), Query Frame = 2

Query:  482 SNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCES------DIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHSTV 835
               +L  A+D IQ+T RCCGVK Y +W+ + ++IS+       P SCC+       +I  +L     E   +  GC   +   ++  + +I G+  GIA F++  +  A CL     N Q+  V
Sbjct:  135 GTNSLSVALDTIQRTLRCCGVKNYTDWKEAPYFISKG-----IPLSCCKDNGNCTVEIMKDLDKAGKE--VFTTGCFALVTTVMESNLGVIAGISFGIAFFQVFGIFLACCLSRYITNNQYEMV 251

[Close]

BLAST of Tetraspanin vs. Ensembl Medaka
Match: cd151 (CD151 antigen [Source:NCBI gene;Acc:101157772])

HSP 1 Score: 64.3142 bits (155), Expect = 1.314e-11
Identity = 69/241 (28.63%), Postives = 127/241 (52.70%), Query Frame = 2

Query:   80 CGAKFSKYTVFLFNILFWITGLIFIVLGSIYLTTGGFKSFEEVITPNDRYFTRLMYXXXXXXXXXXXXXXXXXXXAIRESRXXXXXXXXXXXXXXXXXXSCGIYATXXXXXXXXXXXXXXXXXXXXNYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKY-YKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCL 799
            CG    KY +FLFNILFW+ G   + +G   L     +  + V   N   ++   Y +I  G +V + G  GCC  ++E R LL  Y+VLLL I ++E+  G+ A +  +++  ++ ++L+ ++++ Y        +++  A+D +Q+ F+CCG   + +W  S W  +  +  +  P SCC++  E   R       Y  + GC  +L +++  ++ I+  V IGIA  +++ ++F  CL
Sbjct:   14 CGTICLKYLLFLFNILFWLAGGTVLAVGVWTLV----EKSDYVSLLNSNLYSASAYTLIAAGAVVVMSGIVGCCATLKEMRSLLIVYLVLLLCIFLLEVIAGVMAYINYQDLDEELRQNLKGTMVQKY---KQPGEESITQAVDRLQQEFKCCGSFNFSDWRESVWIQAGKEQLV--PDSCCKTPTEFCGRRDHPSNIYKVEGGCIIKLEDFILNQLYILGAVGIGIAFLQLVGMMFTCCL 245

[Close]

BLAST of Tetraspanin vs. Ensembl Medaka
Match: tspan7 (tetraspanin 6 [Source:NCBI gene;Acc:101163337])

HSP 1 Score: 62.3882 bits (150), Expect = 6.118e-11
Identity = 33/110 (30.00%), Postives = 56/110 (50.91%), Query Frame = 2

Query:  482 SNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCES------DIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAV 793
               +L  A+D IQ+T RCCGVK Y +W+ + ++IS+       P SCC+       +I  +L     E   +  GC   +   ++  + +I G+  GIA F++ L +F +
Sbjct:  135 GTNSLSVALDTIQRTLRCCGVKNYTDWKEAPYFISKG-----IPLSCCKDNGNCTVEIMKDLDKAGKE--VFTTGCFALVTTVMESNLGVIAGISFGIAFFQVRLTLFTM 237

[Close]

BLAST of Tetraspanin vs. Ensembl Medaka
Match: ENSORLT00000000775.2 (CD82 antigen [Source:NCBI gene;Acc:101156312])

HSP 1 Score: 61.6178 bits (148), Expect = 1.060e-10
Identity = 38/120 (31.67%), Postives = 64/120 (53.33%), Query Frame = 2

Query:  497 KNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRS--CFNEQK-----YYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQHSTV 835
            + A D IQK  +CCG    ++W N+   +  N S +  P SC    +  + RS   F E +      Y +GCS  + N+L   + +++G+ + +AL E+L ++ ++CLC N G T +S V
Sbjct:  135 EQAWDLIQKKMQCCGWMGQEDWNNNA--VILNSSQLLFPCSCQNLTLTVQNRSDSGFCEAQTPDWPVYNVGCSASVENWLITNIGVVLGICLTVALIELLGMILSICLCRNVG-TDYSKV 251

[Close]

BLAST of Tetraspanin vs. Planmine SMEST
Match: SMESG000073695.1 (SMESG000073695.1)

HSP 1 Score: 288.886 bits (738), Expect = 2.947e-98
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 2

Query:   68 MAIGCGAKFSKYTVFLFNILFWITGLIFIVLGSIYLTTGGFKSFEEVITPNDRYFTRLMYXXXXXXXXXXXXXXXXXXXAIRESRXXXXXXXXXXXXXXXXXXSCGIYATXXXXXXXXXXXXXXXXXXXXNYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKM 685
            MAIGCGAKFSKYTVFLFNILFWITGLIFIVLGSIYLTTGGFKSFEEVITPNDRYFTRLMYCIIGLGCIVFVVGFCGCCGAIRESRLLLGTYIVLLLLIMIVEISCGIYATVKEKEVVRKIEKSLEKSIIKNYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKM
Sbjct:    1 MAIGCGAKFSKYTVFLFNILFWITGLIFIVLGSIYLTTGGFKSFEEVITPNDRYFTRLMYCIIGLGCIVFVVGFCGCCGAIRESRLLLGTYIVLLLLIMIVEISCGIYATVKEKEVVRKIEKSLEKSIIKNYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKM 206

[Close]

BLAST of Tetraspanin vs. Planmine SMEST
Match: SMESG000021627.1 (SMESG000021627.1)

HSP 1 Score: 123.25 bits (308), Expect = 2.938e-33
Identity = 102/254 (40.16%), Postives = 160/254 (62.99%), Query Frame = 2

Query:   68 MAIGCGAKFSKYTVFLFNILFWITGLIFIVLGSIYLTTGGFKSFEEVITPNDRYFTR-LMYXXXXXXXXXXXXXXXXXXXAIRESRXXXXXXXXXXXXXXXXXXSCGIYATXXXXXXXXXXXXXXXXXXXXNYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNE---QKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGN 817
            MAIGCG K +K  + +FN++FW++GLI IV+ SIYL+    K  E++    D++ +R L   ++ LG I+FV+ FCGCCGA+RES+LLLG YIV L+LI+ ++++ GI+A   ++++ + + K+L+ +I + Y       +++     D IQ+   CCG++  ++WE S WYI + +     P SCC  + E     C+N+      +  GC  RLR YL+   PI +GV++GIA FEI +V+ A CLC NTG+
Sbjct:    1 MAIGCGPKLAKCLLIIFNVVFWLSGLILIVIPSIYLSNEKTKIVEKL----DKFNSRGLFIGVLVLGIIIFVIAFCGCCGAVRESKLLLGMYIVFLMLIIFIQVALGIFAIFYKQKIEKSVSKTLKTAITELY-----GYDKDNDKITDNIQQILSCCGIEGPQDWEKSKWYIEKMNKSQMFPKSCCRDNAE-----CYNKISGATAFSEGCVSRLREYLQRIFPIFIGVILGIAFFEIFVVICAFCLCRNTGS 240

[Close]

BLAST of Tetraspanin vs. Planmine SMEST
Match: SMESG000021642.1 (SMESG000021642.1)

HSP 1 Score: 113.62 bits (283), Expect = 1.325e-29
Identity = 91/253 (35.97%), Postives = 144/253 (56.92%), Query Frame = 2

Query:   68 MAIGCGAKFSKYTVFLFNILFWITGLIFIVLGSIYLTTGGFKSFEEVITPNDRYFTRLMYXXXXXXXXXXXXXXXXXXXAIRESRXXXXXXXXXXXXXXXXXXSCGIYATXXXXXXXXXXXXXXXXXXXXNYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQH 826
            MAIGCG K +K  + +FNI FW TG+I IV+ SIYL  G  K  +++I  N      ++  ++ +G ++F++GF GCCGA++ESR+LL  YI+L+  I+I E+  GI+A VK + +   I+     +    Y      ++  +  AID +Q+   CCG     +W  S WY+++ D     P SCC+  + ++     N    +  GC  ++ +Y K   P+I+GV +GIA FEI +V+ A C+C   G+T H
Sbjct:    1 MAIGCGPKIAKILLIIFNIAFWATGVILIVVASIYLANGTMKYVDDII--NASTNRNILIGLLVIGIVIFIIGFSGCCGAVKESRMLLAIYIILVCAIIIAEVGFGIFAIVKRQPLEDAIKNDFTNTFQNRY-----GNDTTITVAIDNLQQIIPCCGATKQLDWTQSNWYLNKLDKVQTAPKSCCK--LPTDYCWLTNNGTMFPDGCIPKMEDYAKKFFPVIIGVALGIACFEIFVVICAFCVCR--GSTTH 242

[Close]

BLAST of Tetraspanin vs. Planmine SMEST
Match: SMESG000021637.1 (SMESG000021637.1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.447e-17
Identity = 77/253 (30.43%), Postives = 125/253 (49.41%), Query Frame = 2

Query:   68 MAIGCGAKFSKYTVFLFNILFWITGLIFIVLGSIYLTTGGFKSFEEVITPNDRYFTRLMYXXXXXXXXXXXXXXXXXXXAIRESRXXXXXXXXXXXXXXXXXXSCGIYATXXXXXXXXXXXXXXXXXXXXNYPPFNSTSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNEQKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGNTQH 826
            M I CG+  +K  +FLFNI+F  +GLI I++ SI L         + I         +++ I   GC            A++ESR LL  Y+V L++I++ E++ G +  +K      K++    K ++ +Y         +    ++ IQ+ F CCGV    +W+ S WY S N +    P+SCC S+ +  L    N++K  K+GC  +L  YL     I++ V+ GI LFEI +V+ A C+  +  N   
Sbjct:    1 MGIDCGSSLAKIFLFLFNIVFCFSGLILIIMSSILLKDKSIALVNQYIVVFILVLGIIIFLIAFCGCCG----------AVKESRFLLRIYVVSLVVIILSELAIGTFLFIKWNPAAEKLKAEFIKMVMVDYGV-----KMDKTEIVNEIQQGFGCCGVYNDTDWKESYWYKSINKA-QVVPNSCCPSNNKCWLD---NKEKVMKIGCLKKLMQYLNKIFLIVIFVVFGIILFEIFVVMCAFCVYRHKNNIMR 234

[Close]

BLAST of Tetraspanin vs. Planmine SMEST
Match: SMESG000044356.1 (SMESG000044356.1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.803e-9
Identity = 32/116 (27.59%), Postives = 61/116 (52.59%), Query Frame = 2

Query:  479 TSNQNLKNAIDYIQKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCES----DIESELRSCFNEQKY--YKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNN 808
            ++  +L+  IDYIQ T +CCGV+ Y +WE        N+S    P SCC +     + S  ++  +   Y  Y +GCS+ +   +++K   I+ +LI +   +++ +V + C+  +
Sbjct:  125 STEVSLRKEIDYIQSTLQCCGVQNYTDWE------MYNNSI---PDSCCRNMKCKPVLSSTQTTISPDAYEPYIIGCSETVEKLIQHKFVYIILILISVIALQVISLVASCCIIRH 231

The following BLAST results are available for this feature:

BLAST of Tetraspanin vs. Ensembl Human
BLAST of Tetraspanin vs. Ensembl Celegans
BLAST of Tetraspanin vs. Ensembl Fly
BLAST of Tetraspanin vs. Ensembl Zebrafish
BLAST of Tetraspanin vs. Ensembl Xenopus
BLAST of Tetraspanin vs. Ensembl Mouse
BLAST of Tetraspanin vs. UniProt/SwissProt
BLAST of Tetraspanin vs. TrEMBL
BLAST of Tetraspanin vs. Ensembl Cavefish
BLAST of Tetraspanin vs. Ensembl Sea Lamprey
BLAST of Tetraspanin vs. Ensembl Yeast
BLAST of Tetraspanin vs. Ensembl Nematostella
BLAST of Tetraspanin vs. Ensembl Medaka
BLAST of Tetraspanin vs. Planmine SMEST

BLAST of Tetraspanin vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
CD82	1.668e-13	28.06	CD82 molecule [Source:HGNC Symbol;Acc:HGNC:6210]	[more]
CD82	1.790e-13	28.06	CD82 molecule [Source:HGNC Symbol;Acc:HGNC:6210]	[more]
CD63	2.781e-13	32.46	CD63 molecule [Source:HGNC Symbol;Acc:HGNC:1692]	[more]
CD63	2.781e-13	32.46	CD63 molecule [Source:HGNC Symbol;Acc:HGNC:1692]	[more]
CD63	2.805e-13	32.46	CD63 molecule [Source:HGNC Symbol;Acc:HGNC:1692]	[more]

BLAST of Tetraspanin vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1


Match Name	E-value	Identity	Description
tsp-15	1.505e-6	27.68	Tetraspanin-15 [Source:UniProtKB/Swiss-Prot;Acc:Q...	[more]

BLAST of Tetraspanin vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Tsp39D	2.671e-9	31.90	gene:FBgn0032943 transcript:FBtr0273404	[more]
Tsp47F	1.593e-8	34.52	gene:FBgn0033629 transcript:FBtr0088151	[more]
Tsp96F	1.478e-7	27.10	gene:FBgn0027865 transcript:FBtr0330164	[more]
Tsp96F	1.478e-7	27.10	gene:FBgn0027865 transcript:FBtr0084912	[more]
Tsp96F	2.037e-7	27.48	gene:FBgn0027865 transcript:FBtr0330163	[more]

BLAST of Tetraspanin vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
cd151l	7.414e-12	28.57	CD151 antigen, like [Source:ZFIN;Acc:ZDB-GENE-0404...	[more]
cd82a	5.325e-11	26.32	CD82 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-2...	[more]
cd82a	5.325e-11	26.32	CD82 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-2...	[more]
cd82a	5.325e-11	26.32	CD82 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-2...	[more]
tspan3a	1.145e-10	28.57	tetraspanin 3a [Source:ZFIN;Acc:ZDB-GENE-030131-77...	[more]

BLAST of Tetraspanin vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
sertad4	1.004e-12	28.23	SERTA domain containing 4 [Source:Xenbase;Acc:XB-G...	[more]
tspan7	1.040e-11	32.74	tetraspanin 7 [Source:NCBI gene;Acc:394976]	[more]
tspan7	1.047e-11	31.20	tetraspanin 7 [Source:NCBI gene;Acc:394976]	[more]
cd82	1.566e-11	28.00	CD82 molecule [Source:NCBI gene;Acc:394799]	[more]
cd82	1.875e-11	28.00	CD82 molecule [Source:NCBI gene;Acc:394799]	[more]

BLAST of Tetraspanin vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Tspan7	1.553e-12	29.20	tetraspanin 7 [Source:MGI Symbol;Acc:MGI:1298407]	[more]
Tspan7	1.608e-11	29.52	tetraspanin 7 [Source:MGI Symbol;Acc:MGI:1298407]	[more]
Cd151	6.364e-11	25.89	CD151 antigen [Source:MGI Symbol;Acc:MGI:1096360]	[more]
Cd151	6.364e-11	25.89	CD151 antigen [Source:MGI Symbol;Acc:MGI:1096360]	[more]
Cd151	6.364e-11	25.89	CD151 antigen [Source:MGI Symbol;Acc:MGI:1096360]	[more]

BLAST of Tetraspanin vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P27701\|CD82_HUMAN	8.011e-13	28.06	CD82 antigen OS=Homo sapiens OX=9606 GN=CD82 PE=1 ...	[more]
sp\|P08962\|CD63_HUMAN	5.447e-12	32.46	CD63 antigen OS=Homo sapiens OX=9606 GN=CD63 PE=1 ...	[more]
sp\|Q7YQL0\|TSN7_PANTR	9.825e-12	29.09	Tetraspanin-7 OS=Pan troglodytes OX=9598 GN=TSPAN7...	[more]
sp\|P41732\|TSN7_HUMAN	1.025e-11	29.09	Tetraspanin-7 OS=Homo sapiens OX=9606 GN=TSPAN7 PE...	[more]
sp\|Q62283\|TSN7_MOUSE	1.086e-11	29.20	Tetraspanin-7 OS=Mus musculus OX=10090 GN=Tspan7 P...	[more]

BLAST of Tetraspanin vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A3M6V1C7	5.856e-16	34.48	Tetraspanin OS=Pocillopora damicornis OX=46731 GN=...	[more]
A0A3S1CDQ5	1.764e-15	32.69	Tetraspanin OS=Elysia chlorotica OX=188477 GN=EGW0...	[more]
A0A2B4S9Q7	3.866e-15	35.65	Tetraspanin OS=Stylophora pistillata OX=50429 GN=C...	[more]
A0A091VU43	1.076e-13	32.37	Tetraspanin (Fragment) OS=Nipponia nippon OX=12839...	[more]
A0A091W6R2	1.286e-13	30.94	Tetraspanin (Fragment) OS=Opisthocomus hoazin OX=3...	[more]

BLAST of Tetraspanin vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
cd82b	4.517e-13	32.26	CD82 antigen-like [Source:NCBI gene;Acc:107197274]	[more]
tspan11	3.786e-12	32.63	tetraspanin-11-like [Source:NCBI gene;Acc:10302424...	[more]
cd151	1.381e-11	30.45	CD151 antigen-like [Source:NCBI gene;Acc:103041246...	[more]
tspan3a	9.145e-11	31.03	tetraspanin 3 [Source:NCBI gene;Acc:103046031]	[more]
tspan11	1.059e-10	31.49	tetraspanin-11-like [Source:NCBI gene;Acc:10302424...	[more]

BLAST of Tetraspanin vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSPMAT00000005284.1	1.466e-15	32.57	pep scaffold:Pmarinus_7.0:GL480552:16638:25636:-1 ...	[more]
CD151	1.474e-12	28.83	CD151 molecule (Raph blood group) [Source:HGNC Sym...	[more]
CD151	2.448e-11	28.22	CD151 molecule (Raph blood group) [Source:HGNC Sym...	[more]
ENSPMAT00000009492.1	1.149e-10	27.84	pep scaffold:Pmarinus_7.0:GL476618:258874:270129:-...	[more]
tspan17	1.454e-9	27.05	tetraspanin 17 [Source:ZFIN;Acc:ZDB-GENE-030131-36...	[more]

BLAST of Tetraspanin vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Tetraspanin vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO46887	9.649e-13	29.20	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO35917	7.225e-12	32.78	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO30837	9.632e-11	28.57	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO47592	1.909e-10	32.76	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO38288	2.854e-10	28.70	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Tetraspanin vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
tspan7b	2.452e-13	32.54	tetraspanin 7 [Source:NCBI gene;Acc:101163366]	[more]
tspan7	1.505e-12	29.84	tetraspanin 6 [Source:NCBI gene;Acc:101163337]	[more]
cd151	1.314e-11	28.63	CD151 antigen [Source:NCBI gene;Acc:101157772]	[more]
tspan7	6.118e-11	30.00	tetraspanin 6 [Source:NCBI gene;Acc:101163337]	[more]
ENSORLT00000000775.2	1.060e-10	31.67	CD82 antigen [Source:NCBI gene;Acc:101156312]	[more]

BLAST of Tetraspanin vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000073695.1	2.947e-98	100.00	SMESG000073695.1	[more]
SMESG000021627.1	2.938e-33	40.16	SMESG000021627.1	[more]
SMESG000021642.1	1.325e-29	35.97	SMESG000021642.1	[more]
SMESG000021637.1	5.447e-17	30.43	SMESG000021637.1	[more]
SMESG000044356.1	1.803e-9	27.59	SMESG000044356.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30018665 ID=SMED30018665|Name=Tetraspanin|organism=Schmidtea mediterranea sexual|type=transcript|length=950bp
AACAGACATTTTTAAAATAATATTTTAGCTAAAAATAAATTGTGATTTGG
ATAAAATAATTATTAATATGGCTATAGGATGTGGAGCAAAATTTTCCAAA
TATACTGTTTTTTTATTTAATATTTTATTTTGGATTACCGGTTTGATATT
CATTGTTCTCGGCTCAATATATTTAACCACTGGTGGTTTCAAAAGTTTTG
AAGAAGTTATCACACCAAATGATCGATATTTTACAAGACTTATGTATTGT
ATTATCGGATTGGGATGCATTGTTTTTGTCGTAGGTTTTTGTGGATGCTG
TGGTGCTATTCGAGAAAGCAGATTATTACTTGGAACGTATATCGTGTTGC
TATTACTCATTATGATTGTCGAAATCAGTTGTGGGATCTATGCAACAGTG
AAAGAGAAAGAGGTAGTAAGAAAAATTGAAAAAAGTCTTGAAAAATCAAT
TATTAAGAATTATCCTCCTTTCAATTCTACTTCTAACCAGAATTTGAAGA
ATGCAATTGACTATATACAGAAAACATTTAGATGTTGTGGAGTAAAGACC
TATAAAAACTGGGAAAATTCGACATGGTATATATCAAGAAATGATTCTTT
TATGGAAACACCATCTTCATGTTGTGAGTCTGATATTGAAAGTGAATTAA
GAAGTTGTTTCAATGAACAAAAATATTATAAAATGGGCTGCAGTGATCGA
CTAAGGAATTATTTAAAATATAAAATGCCTATAATAGTCGGGGTTCTAAT
AGGAATTGCATTATTTGAGATTTTATTAGTGGTTTTTGCCGTTTGCCTTT
GTAATAATACTGGAAATACGCAACATTCAACTGTTTGATCTTGTTGAAGC
AATTATATTTTAAAATGGTTAATTGATTTTAACATAATTTTTGACTTTAT
AATTTATATATATATATACCATATATTATTTTATATTCATGTGTTATAAC

protein sequence of SMED30018665-orf-1

>SMED30018665-orf-1 ID=SMED30018665-orf-1|Name=SMED30018665-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=257bp
MAIGCGAKFSKYTVFLFNILFWITGLIFIVLGSIYLTTGGFKSFEEVITP
NDRYFTRLMYCIIGLGCIVFVVGFCGCCGAIRESRLLLGTYIVLLLLIMI
VEISCGIYATVKEKEVVRKIEKSLEKSIIKNYPPFNSTSNQNLKNAIDYI
QKTFRCCGVKTYKNWENSTWYISRNDSFMETPSSCCESDIESELRSCFNE
QKYYKMGCSDRLRNYLKYKMPIIVGVLIGIALFEILLVVFAVCLCNNTGN
TQHSTV*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000014	zeta neoblast
PLANA:0000016	pharynx
PLANA:0000099	neuron
PLANA:0000101	muscle cell
PLANA:0000420	parapharyngeal region

Vocabulary: **INTERPRO**
Term	Definition
IPR000301	Tetraspanin
IPR018499	Tetraspanin/Peripherin
IPR008952	Tetraspanin_EC2_sf

Vocabulary: **cellular component**
Term	Definition
GO:0016021	integral component of membrane
GO:0005887	integral component of plasma membrane
GO:0016020	membrane
GO:0070062	extracellular exosome

Vocabulary: **biological process**
Term	Definition
GO:0007166	cell surface receptor signaling pathway

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000301	Tetraspanin	PRINTS	PR00259	TMFOUR	coord: 55..81 score: 37.27 coord: 82..110 score: 34.48 coord: 12..35 score: 30.32 coord: 222..248 score: 31.99
IPR000301	Tetraspanin	PIRSF	PIRSF002419	Tetraspanin	coord: 1..256 e-value: 3.4E-54 score: 181.2
IPR008952	Tetraspanin, EC2 domain superfamily	GENE3D	G3DSA:1.10.1450.10		coord: 110..219 e-value: 1.2E-8 score: 36.6
IPR008952	Tetraspanin, EC2 domain superfamily	SUPERFAMILY	SSF48652	Tetraspanin	coord: 119..219
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 11..246 e-value: 2.5E-51 score: 174.6
None	No IPR available	PANTHER	PTHR19282	TETRASPANIN	coord: 4..247
None	No IPR available	PANTHER	PTHR19282:SF273	TETRASPANIN	coord: 4..247
None	No IPR available	TMHMM	TMhelix		coord: 222..244
None	No IPR available	TMHMM	TMhelix		coord: 88..110
None	No IPR available	TMHMM	TMhelix		coord: 54..76
None	No IPR available	TMHMM	TMhelix		coord: 12..34

Main menu

Tetraspanin

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 13

Owlery

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