ATP dependent RNA helicase DDX5
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Expression Details ATP dependent RNA helicase DDX5 ( DDX5-like ) is expressed during Stage 2, Stage 3 and Stage 4 in the embryonic digestive system, embryonic pharynx, primitive ectoderm, primitive ectoderm cell and blastomere Click to see image symbols and abbreviations
Anatomical Expression
PAGE et. al., 2020SMED30018602 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 10Note: Hover over icons to view figure legend
Homology
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Human
Match: DDX17 (DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]) HSP 1 Score: 154.451 bits (389), Expect = 4.570e-43 Identity = 72/144 (50.00%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDL 447 +L+E + +K I+F ETKR+ D + +R + +HGDKSQ +R+++LN FR IL+ATDVASRGLDV+D+K VINYD+P EDY+HRIGRT R G +YTFF N K AR+L+KV+EEANQ+++ L L Sbjct: 408 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQL 551
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Human
Match: DDX17 (DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]) HSP 1 Score: 154.451 bits (389), Expect = 4.615e-43 Identity = 72/144 (50.00%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDL 447 +L+E + +K I+F ETKR+ D + +R + +HGDKSQ +R+++LN FR IL+ATDVASRGLDV+D+K VINYD+P EDY+HRIGRT R G +YTFF N K AR+L+KV+EEANQ+++ L L Sbjct: 408 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQL 551
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Human
Match: DDX17 (DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]) HSP 1 Score: 154.451 bits (389), Expect = 4.755e-43 Identity = 72/144 (50.00%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDL 447 +L+E + +K I+F ETKR+ D + +R + +HGDKSQ +R+++LN FR IL+ATDVASRGLDV+D+K VINYD+P EDY+HRIGRT R G +YTFF N K AR+L+KV+EEANQ+++ L L Sbjct: 408 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQL 551
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Human
Match: DDX17 (DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]) HSP 1 Score: 154.451 bits (389), Expect = 4.802e-43 Identity = 72/144 (50.00%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDL 447 +L+E + +K I+F ETKR+ D + +R + +HGDKSQ +R+++LN FR IL+ATDVASRGLDV+D+K VINYD+P EDY+HRIGRT R G +YTFF N K AR+L+KV+EEANQ+++ L L Sbjct: 408 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQL 551
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Human
Match: DDX5 (DEAD-box helicase 5 [Source:HGNC Symbol;Acc:HGNC:2746]) HSP 1 Score: 148.288 bits (373), Expect = 1.495e-41 Identity = 71/144 (49.31%), Postives = 95/144 (65.97%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDL 447 RL+E + +K IVF ETKR+ D + +R + +HGDKSQ +R+++LN F+ IL+ATDVASRGLDV+D+K VINYD+P EDYIHRIGRT R K+G +YTFF N K L+ V+ EANQ+++ L L Sbjct: 252 RLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQL 395
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Celegans
Match: ddx-17 (DEAD boX helicase homolog [Source:UniProtKB/TrEMBL;Acc:Q9XUW5]) HSP 1 Score: 151.754 bits (382), Expect = 4.988e-43 Identity = 72/153 (47.06%), Postives = 104/153 (67.97%), Query Frame = 1 Query: 1 YSKDKRLLEVVSKT---PRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 ++K +L+E+++ K I+F ETKRKAD + +R + +HGDK+Q +R+++L F+ I++ATDVA+RGLDVDDIK VINYD+P EDY+HRIGRTGR K G +YTFF N+ A+ L+KV++EA Q+V +L D+A Sbjct: 358 HAKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQALRDMA 510
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Celegans
Match: ddx-17 (DEAD boX helicase homolog [Source:UniProtKB/TrEMBL;Acc:Q9XUW5]) HSP 1 Score: 151.754 bits (382), Expect = 4.988e-43 Identity = 72/153 (47.06%), Postives = 104/153 (67.97%), Query Frame = 1 Query: 1 YSKDKRLLEVVSKT---PRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 ++K +L+E+++ K I+F ETKRKAD + +R + +HGDK+Q +R+++L F+ I++ATDVA+RGLDVDDIK VINYD+P EDY+HRIGRTGR K G +YTFF N+ A+ L+KV++EA Q+V +L D+A Sbjct: 358 HAKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQALRDMA 510
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Celegans
Match: ddx-17 (DEAD boX helicase homolog [Source:UniProtKB/TrEMBL;Acc:Q9XUW5]) HSP 1 Score: 151.754 bits (382), Expect = 4.988e-43 Identity = 72/153 (47.06%), Postives = 104/153 (67.97%), Query Frame = 1 Query: 1 YSKDKRLLEVVSKT---PRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 ++K +L+E+++ K I+F ETKRKAD + +R + +HGDK+Q +R+++L F+ I++ATDVA+RGLDVDDIK VINYD+P EDY+HRIGRTGR K G +YTFF N+ A+ L+KV++EA Q+V +L D+A Sbjct: 358 HAKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQALRDMA 510
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Celegans
Match: ddx-17 (DEAD boX helicase homolog [Source:UniProtKB/TrEMBL;Acc:Q9XUW5]) HSP 1 Score: 151.754 bits (382), Expect = 4.988e-43 Identity = 72/153 (47.06%), Postives = 104/153 (67.97%), Query Frame = 1 Query: 1 YSKDKRLLEVVSKT---PRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 ++K +L+E+++ K I+F ETKRKAD + +R + +HGDK+Q +R+++L F+ I++ATDVA+RGLDVDDIK VINYD+P EDY+HRIGRTGR K G +YTFF N+ A+ L+KV++EA Q+V +L D+A Sbjct: 358 HAKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQALRDMA 510
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Celegans
Match: ddx-17 (DEAD boX helicase homolog [Source:UniProtKB/TrEMBL;Acc:Q9XUW5]) HSP 1 Score: 151.754 bits (382), Expect = 4.988e-43 Identity = 72/153 (47.06%), Postives = 104/153 (67.97%), Query Frame = 1 Query: 1 YSKDKRLLEVVSKT---PRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 ++K +L+E+++ K I+F ETKRKAD + +R + +HGDK+Q +R+++L F+ I++ATDVA+RGLDVDDIK VINYD+P EDY+HRIGRTGR K G +YTFF N+ A+ L+KV++EA Q+V +L D+A Sbjct: 358 HAKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQALRDMA 510
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Fly
Match: Rm62 (gene:FBgn0003261 transcript:FBtr0302597) HSP 1 Score: 161.77 bits (408), Expect = 1.579e-46 Identity = 81/156 (51.92%), Postives = 111/156 (71.15%), Query Frame = 1 Query: 1 YSKDKRLLEVVS------KTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 +SK+++L ++S ++P K+I+F ETKR+ D + F+RS R GA+HGDKSQS+R+++L FR NILVATDVA+RGLDVD IK VIN+D+P EDYIHRIGRTGR G S+ FF + N+K A+ LV V+ EANQ ++ +L +LA Sbjct: 369 FSKEEKLKTLLSDIYDTSESP-GKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Fly
Match: Rm62 (gene:FBgn0003261 transcript:FBtr0078653) HSP 1 Score: 161.77 bits (408), Expect = 1.579e-46 Identity = 81/156 (51.92%), Postives = 111/156 (71.15%), Query Frame = 1 Query: 1 YSKDKRLLEVVS------KTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 +SK+++L ++S ++P K+I+F ETKR+ D + F+RS R GA+HGDKSQS+R+++L FR NILVATDVA+RGLDVD IK VIN+D+P EDYIHRIGRTGR G S+ FF + N+K A+ LV V+ EANQ ++ +L +LA Sbjct: 369 FSKEEKLKTLLSDIYDTSESP-GKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Fly
Match: Rm62 (gene:FBgn0003261 transcript:FBtr0078649) HSP 1 Score: 161.384 bits (407), Expect = 1.733e-46 Identity = 81/156 (51.92%), Postives = 111/156 (71.15%), Query Frame = 1 Query: 1 YSKDKRLLEVVS------KTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 +SK+++L ++S ++P K+I+F ETKR+ D + F+RS R GA+HGDKSQS+R+++L FR NILVATDVA+RGLDVD IK VIN+D+P EDYIHRIGRTGR G S+ FF + N+K A+ LV V+ EANQ ++ +L +LA Sbjct: 369 FSKEEKLKTLLSDIYDTSESP-GKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Fly
Match: Rm62 (gene:FBgn0003261 transcript:FBtr0078651) HSP 1 Score: 161.384 bits (407), Expect = 1.733e-46 Identity = 81/156 (51.92%), Postives = 111/156 (71.15%), Query Frame = 1 Query: 1 YSKDKRLLEVVS------KTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 +SK+++L ++S ++P K+I+F ETKR+ D + F+RS R GA+HGDKSQS+R+++L FR NILVATDVA+RGLDVD IK VIN+D+P EDYIHRIGRTGR G S+ FF + N+K A+ LV V+ EANQ ++ +L +LA Sbjct: 369 FSKEEKLKTLLSDIYDTSESP-GKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Fly
Match: Rm62 (gene:FBgn0003261 transcript:FBtr0078654) HSP 1 Score: 161.384 bits (407), Expect = 1.733e-46 Identity = 81/156 (51.92%), Postives = 111/156 (71.15%), Query Frame = 1 Query: 1 YSKDKRLLEVVS------KTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 +SK+++L ++S ++P K+I+F ETKR+ D + F+RS R GA+HGDKSQS+R+++L FR NILVATDVA+RGLDVD IK VIN+D+P EDYIHRIGRTGR G S+ FF + N+K A+ LV V+ EANQ ++ +L +LA Sbjct: 369 FSKEEKLKTLLSDIYDTSESP-GKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Zebrafish
Match: ddx5 (DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]) HSP 1 Score: 148.673 bits (374), Expect = 4.707e-42 Identity = 71/145 (48.97%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 RLLE + +K I+F ETKR+ D + +R + +HGDK+Q +R+++LN F+ IL+ATDVASRGLDV+D+K VIN+D+P EDYIHRIGRT R K+G +YTFF N K A LV V+ EANQ+++ L +A Sbjct: 333 RLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHDLVSVLREANQAINPKLIQMA 477
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Zebrafish
Match: ddx5 (DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]) HSP 1 Score: 149.058 bits (375), Expect = 1.516e-41 Identity = 71/145 (48.97%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 RLLE + +K I+F ETKR+ D + +R + +HGDK+Q +R+++LN F+ IL+ATDVASRGLDV+D+K VIN+D+P EDYIHRIGRT R K+G +YTFF N K A LV V+ EANQ+++ L +A Sbjct: 333 RLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHDLVSVLREANQAINPKLIQMA 477
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Zebrafish
Match: DDX17 (si:dkey-156n14.5 [Source:ZFIN;Acc:ZDB-GENE-030131-18]) HSP 1 Score: 145.976 bits (367), Expect = 2.867e-40 Identity = 68/144 (47.22%), Postives = 95/144 (65.97%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDL 447 +L+E + +K I+F ETK++ D + +R + +HGDKSQ +R+++L FR IL+ATDVASRGLDV+D+K VINYD+P EDY+HRIGRT R G +YTFF N + AR LV+V+EEA Q+++ L L Sbjct: 332 QLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQL 475
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Zebrafish
Match: si:dkey-156n14.5 (si:dkey-156n14.5 [Source:ZFIN;Acc:ZDB-GENE-030131-18]) HSP 1 Score: 145.591 bits (366), Expect = 3.357e-40 Identity = 68/144 (47.22%), Postives = 95/144 (65.97%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDL 447 +L+E + +K I+F ETK++ D + +R + +HGDKSQ +R+++L FR IL+ATDVASRGLDV+D+K VINYD+P EDY+HRIGRT R G +YTFF N + AR LV+V+EEA Q+++ L L Sbjct: 343 QLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQL 486
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Zebrafish
Match: ddx3xb (DEAD-box helicase 3 X-linked b [Source:ZFIN;Acc:ZDB-GENE-980526-150]) HSP 1 Score: 135.576 bits (340), Expect = 1.551e-36 Identity = 70/151 (46.36%), Postives = 99/151 (65.56%), Query Frame = 1 Query: 10 DKR--LLEVVSKTPRDKM-IVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAY 453 DKR LL++++ T +D + +VF ETK+ AD + FL + + ++HGD+SQ DRE L+ FR ILVAT VA+RGLD+ ++K VIN+D P E+Y+HRIGRTGR G G++ +FFN KN + L+ ++ EA Q V L LAY Sbjct: 458 DKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNGNITKDLLDILVEAKQEVPSWLESLAY 608
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Xenopus
Match: ddx17 (DEAD-box helicase 17 [Source:NCBI gene;Acc:549535]) HSP 1 Score: 152.14 bits (383), Expect = 1.454e-43 Identity = 73/145 (50.34%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 +L+E + +K I+F ETKR+ D + +R + +HGDKSQ +R+++L FR IL+ATDVASRGLDV+DIK VINYD+P EDY+HRIGRT R G +YTFF N K AR+LVKV+EEANQ+++ L L Sbjct: 279 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQQERDWVLCEFRTGKAPILIATDVASRGLDVEDIKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELVKVLEEANQTINPKLMQLV 423
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Xenopus
Match: ddx17 (DEAD-box helicase 17 [Source:NCBI gene;Acc:549535]) HSP 1 Score: 152.14 bits (383), Expect = 2.867e-43 Identity = 73/145 (50.34%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 +L+E + +K I+F ETKR+ D + +R + +HGDKSQ +R+++L FR IL+ATDVASRGLDV+DIK VINYD+P EDY+HRIGRT R G +YTFF N K AR+LVKV+EEANQ+++ L L Sbjct: 306 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQQERDWVLCEFRTGKAPILIATDVASRGLDVEDIKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELVKVLEEANQTINPKLMQLV 450
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Xenopus
Match: ddx17 (DEAD-box helicase 17 [Source:NCBI gene;Acc:549535]) HSP 1 Score: 152.14 bits (383), Expect = 4.549e-43 Identity = 73/145 (50.34%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 +L+E + +K I+F ETKR+ D + +R + +HGDKSQ +R+++L FR IL+ATDVASRGLDV+DIK VINYD+P EDY+HRIGRT R G +YTFF N K AR+LVKV+EEANQ+++ L L Sbjct: 321 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQQERDWVLCEFRTGKAPILIATDVASRGLDVEDIKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELVKVLEEANQTINPKLMQLV 465
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Xenopus
Match: ddx17 (DEAD-box helicase 17 [Source:NCBI gene;Acc:549535]) HSP 1 Score: 151.754 bits (382), Expect = 5.758e-43 Identity = 73/145 (50.34%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 +L+E + +K I+F ETKR+ D + +R + +HGDKSQ +R+++L FR IL+ATDVASRGLDV+DIK VINYD+P EDY+HRIGRT R G +YTFF N K AR+LVKV+EEANQ+++ L L Sbjct: 310 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQQERDWVLCEFRTGKAPILIATDVASRGLDVEDIKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELVKVLEEANQTINPKLMQLV 454
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Xenopus
Match: ddx17 (DEAD-box helicase 17 [Source:NCBI gene;Acc:549535]) HSP 1 Score: 151.754 bits (382), Expect = 6.173e-43 Identity = 73/145 (50.34%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 +L+E + +K I+F ETKR+ D + +R + +HGDKSQ +R+++L FR IL+ATDVASRGLDV+DIK VINYD+P EDY+HRIGRT R G +YTFF N K AR+LVKV+EEANQ+++ L L Sbjct: 333 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQQERDWVLCEFRTGKAPILIATDVASRGLDVEDIKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELVKVLEEANQTINPKLMQLV 477
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Mouse
Match: Ddx17 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Source:MGI Symbol;Acc:MGI:1914290]) HSP 1 Score: 154.451 bits (389), Expect = 2.070e-43 Identity = 72/144 (50.00%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDL 447 +L+E + +K I+F ETKR+ D + +R + +HGDKSQ +R+++LN FR IL+ATDVASRGLDV+D+K VINYD+P EDY+HRIGRT R G +YTFF N K AR+L+KV+EEANQ+++ L L Sbjct: 329 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQL 472
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Mouse
Match: Ddx17 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Source:MGI Symbol;Acc:MGI:1914290]) HSP 1 Score: 154.451 bits (389), Expect = 2.103e-43 Identity = 72/144 (50.00%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDL 447 +L+E + +K I+F ETKR+ D + +R + +HGDKSQ +R+++LN FR IL+ATDVASRGLDV+D+K VINYD+P EDY+HRIGRT R G +YTFF N K AR+L+KV+EEANQ+++ L L Sbjct: 329 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQL 472
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Mouse
Match: Ddx5 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]) HSP 1 Score: 148.673 bits (374), Expect = 1.854e-41 Identity = 71/144 (49.31%), Postives = 95/144 (65.97%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDL 447 RL+E + +K IVF ETKR+ D + +R + +HGDKSQ +R+++LN F+ IL+ATDVASRGLDV+D+K VINYD+P EDYIHRIGRT R K+G +YTFF N K L+ V+ EANQ+++ L L Sbjct: 331 RLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQL 474
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Mouse
Match: Ddx43 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:MGI Symbol;Acc:MGI:3642857]) HSP 1 Score: 134.42 bits (337), Expect = 2.999e-36 Identity = 63/137 (45.99%), Postives = 92/137 (67.15%), Query Frame = 1 Query: 40 TPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 +P+DK+IVF K AD + S L + V ++HG++ QSDRE L F+ + IL+ATD+ASRGLDV DI V NYDFP E+Y+HR+GRTGR G++G+S T R + + A +L+ ++E ANQ++ + L +A Sbjct: 483 SPKDKVIVFVSRKAVADHLSSDLILRHISVESLHGNREQSDREKALENFKTGKVRILIATDLASRGLDVHDITHVYNYDFPRNIEEYVHRVGRTGRAGRTGMSITLITRNDWRVATELINILERANQNIPEELVLMA 619
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Mouse
Match: Ddx4 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 [Source:MGI Symbol;Acc:MGI:102670]) HSP 1 Score: 133.65 bits (335), Expect = 7.183e-36 Identity = 66/159 (41.51%), Postives = 105/159 (66.04%), Query Frame = 1 Query: 1 YSKDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNR-KNSKSARQLVKVMEEANQSVSDSLYDLA---YIPRS 465 YSK ++L+E++ ++ +VF ETK+KAD I +FL ++ ++HGD+ Q +RE L FR +LVAT VA+RGLD+++++ VIN+D P ++Y+HRIGRTGR G +G + +FF+ ++ A+ LVKV+ +A Q V L ++A Y+P S Sbjct: 498 YSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTDSDNHLAQPLVKVLSDAQQDVPAWLEEIAFSTYVPPS 656
BLAST of ATP dependent RNA helicase DDX5 vs. UniProt/SwissProt
Match: sp|P46942|DB10_NICSY (ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris OX=4096 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.229e-45 Identity = 79/149 (53.02%), Postives = 107/149 (71.81%), Query Frame = 1 Query: 7 KDKRLLEVV-SKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 K +R+ +++ SK P K+I+F TK+ D + L ++ F A+HGDKSQ +R+Y+L+ FR +LVATDVA+RGLD+ DI+VVINYDFP EDY+HRIGRTGR G SG++YTFF+ ++SK A LVKV+E ANQ V L D+A Sbjct: 376 KQRRVEQILRSKEPGSKIIIFCSTKKMCDQLSRNL-TRNFGAAAIHGDKSQGERDYVLSQFRAGRSPVLVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGASGLAYTFFSDQDSKHALDLVKVLEGANQCVPTELRDMA 523
BLAST of ATP dependent RNA helicase DDX5 vs. UniProt/SwissProt
Match: sp|Q5VQL1|RH14_ORYSJ (DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0172200 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.870e-45 Identity = 79/148 (53.38%), Postives = 108/148 (72.97%), Query Frame = 1 Query: 7 KDKRLLEVV-SKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDL 447 K +RL +++ S+ P K+I+F TKR D + L ++Q+ A+HGDKSQ++R+ +L+ FR ILVATDVA+RGLD+ DI+VV+NYDFP EDY+HRIGRTGR G +GV+YTFF ++SK A LVK++E ANQSVS L D+ Sbjct: 411 KSRRLDQILRSQEPGSKIIIFCSTKRMCDQLARNL-ARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDM 557
BLAST of ATP dependent RNA helicase DDX5 vs. UniProt/SwissProt
Match: sp|P19109|DDX17_DROME (ATP-dependent RNA helicase p62 OS=Drosophila melanogaster OX=7227 GN=Rm62 PE=1 SV=3) HSP 1 Score: 161.384 bits (407), Expect = 6.468e-45 Identity = 81/156 (51.92%), Postives = 111/156 (71.15%), Query Frame = 1 Query: 1 YSKDKRLLEVVS------KTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 +SK+++L ++S ++P K+I+F ETKR+ D + F+RS R GA+HGDKSQS+R+++L FR NILVATDVA+RGLDVD IK VIN+D+P EDYIHRIGRTGR G S+ FF + N+K A+ LV V+ EANQ ++ +L +LA Sbjct: 510 FSKEEKLKTLLSDIYDTSESP-GKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 664
BLAST of ATP dependent RNA helicase DDX5 vs. UniProt/SwissProt
Match: sp|Q501J6|DDX17_MOUSE (Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.448e-42 Identity = 72/144 (50.00%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDL 447 +L+E + +K I+F ETKR+ D + +R + +HGDKSQ +R+++LN FR IL+ATDVASRGLDV+D+K VINYD+P EDY+HRIGRT R G +YTFF N K AR+L+KV+EEANQ+++ L L Sbjct: 329 QLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQL 472
BLAST of ATP dependent RNA helicase DDX5 vs. UniProt/SwissProt
Match: sp|Q9LYJ9|RH46_ARATH (DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana OX=3702 GN=RH46 PE=2 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 1.737e-42 Identity = 74/149 (49.66%), Postives = 105/149 (70.47%), Query Frame = 1 Query: 7 KDKRLLEVV-SKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 K RL +++ S+ P K+I+F TKR D + L ++ F A+HGDKSQ++R+ +LN FR +LVATDVA+RGLDV DI+VV+NYDFP EDY+HRIGRTGR G +G++YTFF +++K A L+K++E ANQ V + ++A Sbjct: 392 KHSRLEQILRSQEPGSKIIIFCSTKRMCDQLARNL-TRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQVREMA 539
BLAST of ATP dependent RNA helicase DDX5 vs. TrEMBL
Match: A0A183A0V7 (Uncharacterized protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS592 PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 2.218e-52 Identity = 87/161 (54.04%), Postives = 116/161 (72.05%), Query Frame = 1 Query: 1 YSKDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAYIPRSERRQNF 483 ++K++RL+E+++ R + +VF ETKRK D I LR + F VGAMHGDK Q DRE L+ FR +N+LVATDVASRGLD+DDI+ VIN DFP Q EDYIHRIGRT R K G ++TFF KN K AR L+ ++EEANQ V+ LY+++ + + R+ +F Sbjct: 287 WNKEQRLIELLTMFGRSRCLVFVETKRKTDQITYTLRRRGFAVGAMHGDKQQRDREMTLSSFRDGRINVLVATDVASRGLDIDDIQYVINVDFPNQTEDYIHRIGRTARSDKKGTAFTFFTSKNMKQARDLIDILEEANQEVNPELYNMSGLSAASRKPSF 447
BLAST of ATP dependent RNA helicase DDX5 vs. TrEMBL
Match: A0A4S2LF31 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_007596 PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.348e-51 Identity = 86/163 (52.76%), Postives = 117/163 (71.78%), Query Frame = 1 Query: 1 YSKDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAYIPRSERRQNFNR 489 + K++RL+++++ R++ +VF ETKRK D I LR + F VGAMHGDK Q DRE L FR L++LVATDVASRGLD+DDI+ VIN+DFP Q EDYIHRIGRT R K G ++TFF KN K AR+L++++EEANQ V+ L+ ++ I + RR + + Sbjct: 319 WDKEQRLIQLLTMFGRERCLVFVETKRKTDQITYTLRRRGFAVGAMHGDKQQRDREMTLGSFRDGRLSVLVATDVASRGLDIDDIQYVINFDFPNQTEDYIHRIGRTARSDKKGTAFTFFTSKNIKQARELIEILEEANQEVNPELFRMSGISDAGRRNKYQK 481
BLAST of ATP dependent RNA helicase DDX5 vs. TrEMBL
Match: A0A504YTU3 (ATP dependent RNA helicase DDX5 OS=Fasciola gigantica OX=46835 GN=FGIG_08208 PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 4.301e-51 Identity = 88/161 (54.66%), Postives = 115/161 (71.43%), Query Frame = 1 Query: 1 YSKDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAYIPRSERRQNF 483 ++K++RL+E+++ R + +VF ETKRK D I LR + F VGAMHGDK Q DRE LN FR +N+LVATDVASRGLD+DDI+ VIN DFP Q EDYIHRIGRT R K G ++TFF KN K AR L+ ++EEA Q V+ LY+++ + + R+ NF Sbjct: 329 WNKEQRLIELLTMFGRARCLVFVETKRKTDQITYTLRRRGFAVGAMHGDKQQRDREMTLNSFREGRINVLVATDVASRGLDIDDIQYVINVDFPNQTEDYIHRIGRTARSDKKGTAFTFFTSKNMKQARDLIDILEEAGQEVNPELYNMSGVSAASRKTNF 489
BLAST of ATP dependent RNA helicase DDX5 vs. TrEMBL
Match: A0A2H1CFJ4 (DEAD-box ATP-dependent RNA helicase 30 OS=Fasciola hepatica OX=6192 GN=D915_003901 PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.410e-50 Identity = 88/161 (54.66%), Postives = 114/161 (70.81%), Query Frame = 1 Query: 1 YSKDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAYIPRSERRQNF 483 ++K+ RL+E+++ R + +VF ETKRK D I LR + F VGAMHGDK Q DRE LN FR +N+LVATDVASRGLD+DDI+ VIN DFP Q EDYIHRIGRT R K G ++TFF KN K AR L+ ++EEA Q V+ LY+++ + + R+ NF Sbjct: 317 WNKELRLIELLTMFGRARCLVFVETKRKTDQITYTLRRRGFAVGAMHGDKQQRDREMTLNSFREGRINVLVATDVASRGLDIDDIQYVINVDFPNQTEDYIHRIGRTARSDKKGTAFTFFTSKNMKQARDLIDILEEAGQEVNPELYNMSGVSAASRKTNF 477
BLAST of ATP dependent RNA helicase DDX5 vs. TrEMBL
Match: G7YD59 (ATP-dependent RNA helicase DDX5/DBP2 OS=Clonorchis sinensis OX=79923 GN=CLF_105191 PE=4 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 3.349e-50 Identity = 85/163 (52.15%), Postives = 117/163 (71.78%), Query Frame = 1 Query: 1 YSKDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAYIPRSERRQNFNR 489 + K++RL+++++ R++ +VF ETKRK D I LR + F VGAMHGDK Q DRE L FR L++LVATDVASRGLD+DDI+ VIN+DFP Q EDYIHRIGRT R K G ++TFF KN + AR+L++++EEANQ V+ L+ ++ I + RR + + Sbjct: 603 WDKEQRLIQLLTMFGRERCLVFVETKRKTDQITYTLRRRGFAVGAMHGDKQQRDREMTLGSFRDGRLSVLVATDVASRGLDIDDIQYVINFDFPNQTEDYIHRIGRTARSDKKGTAFTFFTSKNLRQARELIEILEEANQEVNPELFRMSGISDAGRRNKYQK 765
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Cavefish
Match: DDX5 (probable ATP-dependent RNA helicase DDX5 [Source:NCBI gene;Acc:103046784]) HSP 1 Score: 151.754 bits (382), Expect = 1.308e-42 Identity = 72/145 (49.66%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 RLLE + +K I+F ETKR+ D + +R + +HGDKSQ +R+++LN F+ IL+ATDVASRGLDV+D+K VINYD+P EDYIHRIGRT R K+G +YTFF N K A L+ V+ EANQ+++ L +A Sbjct: 331 RLLEEIMSEKENKTIIFVETKRRCDELTRRMRRDGWPAMGIHGDKSQQERDWVLNEFKYGKACILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQANDLISVLREANQAINPKLLQMA 475
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Cavefish
Match: ENSAMXT00000004594.2 (pep primary_assembly:Astyanax_mexicanus-2.0:13:19468841:19477092:-1 gene:ENSAMXG00000042015.1 transcript:ENSAMXT00000004594.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 144.821 bits (364), Expect = 3.934e-42 Identity = 68/145 (46.90%), Postives = 95/145 (65.52%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 +L+E + +K I+F ETK++ D + +R + +HGDKSQ +R+++L FR IL+ATDVASRGLDV+D+K VINYD+P EDY+HRIGRT R G +YTFF N + AR LV+V+EEA Q+++ L L Sbjct: 163 QLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLV 307
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Cavefish
Match: ddx5 (probable ATP-dependent RNA helicase DDX5 [Source:NCBI gene;Acc:103024726]) HSP 1 Score: 150.214 bits (378), Expect = 3.952e-42 Identity = 72/145 (49.66%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 RLLE + +K I+F ETKR+ D + +R + +HGDKSQ +R+++LN F+ IL+ATDVASRGLDV+D+K VIN+D+P EDYIHRIGRT R K+G +YTFF N K A LV V+ EANQ+++ L +A Sbjct: 333 RLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKSQQERDWVLNEFKFGKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHDLVSVLREANQAINPKLIQMA 477
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Cavefish
Match: ddx3xb (DEAD-box helicase 3 X-linked b [Source:ZFIN;Acc:ZDB-GENE-980526-150]) HSP 1 Score: 138.658 bits (348), Expect = 5.825e-38 Identity = 72/151 (47.68%), Postives = 100/151 (66.23%), Query Frame = 1 Query: 10 DKR--LLEVVSKTPRDKM-IVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAY 453 DKR LL++++ T +D + +VF ETK+ AD + FL + + ++HGD+SQ DRE LN FR ILVAT VA+RGLD+ ++K VIN+D P E+Y+HRIGRTGR G G++ +FFN KNS + L+ ++ EA Q V L LAY Sbjct: 382 DKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALNQFRSGRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNSNITKDLLDILVEAKQEVPSWLESLAY 532
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Cavefish
Match: ddx4 (DEAD-box helicase 4 [Source:NCBI gene;Acc:103041190]) HSP 1 Score: 135.576 bits (340), Expect = 9.960e-37 Identity = 66/152 (43.42%), Postives = 100/152 (65.79%), Query Frame = 1 Query: 1 YSKDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFF-NRKNSKSARQLVKVMEEANQSVSDSLYDLAY 453 YSK ++LLE++ T ++ +VF ETKR AD I +FL ++ ++HGD+ Q +RE L+ FR +LVAT VA+RGLD++ ++ V+N+D P E+Y+HRIGRTGR G +G + +FF ++ AR LVKV+ A Q V L ++A+ Sbjct: 452 YSKREQLLELLKTTGTERTMVFVETKRSADFIATFLCQEKVPTTSIHGDREQREREKALSDFRTGQCPVLVATSVAARGLDIEHVQHVVNFDLPNNIEEYVHRIGRTGRCGNTGRAVSFFYPESDTPLARSLVKVLTGAQQEVPPWLEEIAF 603
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003898.1 (pep scaffold:Pmarinus_7.0:GL481305:13824:21767:-1 gene:ENSPMAG00000003524.1 transcript:ENSPMAT00000003898.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 134.42 bits (337), Expect = 2.770e-37 Identity = 72/156 (46.15%), Postives = 103/156 (66.03%), Query Frame = 1 Query: 10 DKR--LLEVVSKTPRDKM-IVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAYIPRSE 468 DKR LL++++ T RD + +VF ETK+ AD + FL S+ + ++HGD+SQ DRE L+ FR ILVAT VA+RGLD+ ++K VIN+D P E+Y+HRIGRTGR G G + +F+N KN R+L+ ++ EA+Q V L +A RS+ Sbjct: 308 DKRSFLLDLLNATGRDSLTLVFVETKKGADALQGFLCSEGYSCTSIHGDRSQRDREEALSLFRTGRRPILVATAVAARGLDIPNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGQATSFYNEKNENMTRELLHLLVEAHQEVPSWLETMAQEHRSK 463
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Sea Lamprey
Match: DDX41 (DEAD-box helicase 41 [Source:HGNC Symbol;Acc:HGNC:18674]) HSP 1 Score: 113.235 bits (282), Expect = 7.183e-32 Identity = 61/141 (43.26%), Postives = 86/141 (60.99%), Query Frame = 1 Query: 19 LLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVK-VMEEANQSVSDSL 438 LLE + K+ +++FAE K D I +L K A+HG K Q +R + FR ++LVATDVAS+GLD +I+ VINYD P + E+Y+HRIGRTGR GK+G++ TF N+ +S +K ++ EA Q V L Sbjct: 38 LLECLQKS-SPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAMESFREGKKDVLVATDVASKGLDFPNIQHVINYDMPEEIENYVHRIGRTGRSGKTGIATTFINKSCDESVLMDLKALLMEAKQKVPPVL 177
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Sea Lamprey
Match: ddx23 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]) HSP 1 Score: 114.775 bits (286), Expect = 5.235e-30 Identity = 61/157 (38.85%), Postives = 89/157 (56.69%), Query Frame = 1 Query: 4 SKDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAYIPRSERR 474 K K+LLE++S+ +I+F K+ D++ L F +HG K Q RE+ L+ + +ILVATDVA RG+D+ D+ +V+NYD EDY HRIGRTGR GKSGVS TF ++++ L + M VS +LA P ++ + Sbjct: 579 EKRKKLLELLSRGFEPPIIIFVNQKKGCDVLAKSLEKMGFNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIHDVSMVLNYDMAKNIEDYTHRIGRTGRAGKSGVSVTFLTKEDAAVFYDLKQAM--LGSPVSQCPPELANHPDAQHK 733
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Sea Lamprey
Match: ddx42 (DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]) HSP 1 Score: 112.079 bits (279), Expect = 5.406e-29 Identity = 55/141 (39.01%), Postives = 86/141 (60.99%), Query Frame = 1 Query: 28 VVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 +V T +++F K ++ + + L + F+VG +HGD QS+R +++ F+ + + I+VATDVA+RGLD+ IK V+NYD + + HR+GRTGR G+ G ++T K+ A LV+ +E ANQ V L DLA Sbjct: 488 LVEFTSSGSVLIFVTRKDNSEELSNDLEQEGFQVGLLHGDMDQSERNKVISDFKKKVIPIMVATDVAARGLDIPSIKTVVNYDVARDIDTHTHRVGRTGRAGEKGTAFTLMTHKDMNFAGDLVRNLEGANQHVHKELMDLA 628
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000216.1 (pep scaffold:Pmarinus_7.0:GL476721:117971:126978:-1 gene:ENSPMAG00000000186.1 transcript:ENSPMAT00000000216.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 103.219 bits (256), Expect = 2.170e-26 Identity = 52/120 (43.33%), Postives = 74/120 (61.67%), Query Frame = 1 Query: 7 KDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNR 366 KD L+ ++++ + I+F T I LR+ F +HG SQ+ R LN F+G+ +IL+ATDVASRGLD+ + VVIN+D P +DYIHR+GRT R G+SG S TF ++ Sbjct: 221 KDSYLVYILNELAGNSFIIFCSTCNNTQRIALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKGKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVSQ 340
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Yeast
Match: DBP1 (Putative ATP-dependent RNA helicase of the DEAD-box protein family; mutants show reduced stability of the 40S ribosomal subunit scanning through 5' untranslated regions of mRNAs; protein abundance increases in response to DNA replication stress; DBP1 has a paralog, DED1, that arose from the whole genome duplication [Source:SGD;Acc:S000006040]) HSP 1 Score: 141.354 bits (355), Expect = 9.365e-40 Identity = 66/148 (44.59%), Postives = 98/148 (66.22%), Query Frame = 1 Query: 7 KDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 K LL+++S + ++F ETKR AD + FL + F+ A+HGD++Q++RE L+ F+ +ILVAT VA+RGLD+ ++ VINYD P +DY+HRIGRTGR G +GV+ +FFN N + L++++ EANQ V L DL+ Sbjct: 398 KKSALLDLLSAEHKGLTLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEANQEVPTFLSDLS 545
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Yeast
Match: DED1 (ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase; required for translation initiation of all yeast mRNAs; binds to mRNA cap-associated factors, and binding stimulates Ded1p RNA-dependent ATPase activity; mutation in human homolog DBY is associated with male infertility; human homolog DDX3X complements ded1 null mutation; DED1 has a paralog, DBP1, that arose from the whole genome duplication [Source:SGD;Acc:S000005730]) HSP 1 Score: 139.813 bits (351), Expect = 2.604e-39 Identity = 73/165 (44.24%), Postives = 101/165 (61.21%), Query Frame = 1 Query: 7 KDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYD-LAYIPRS---ERRQNFNR 489 K LL+++S + ++F ETKR AD + FL + FR A+HGD++QS+RE L FR +LVAT VA+RGLD+ ++ VINYD P +DY+HRIGRTGR G +G++ FFN +NS + L +++ EANQ V L D + P S RR F R Sbjct: 386 KKSALLDLLSASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFLKDAMMSAPGSRSNSRRGGFGR 550
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Yeast
Match: DBP2 (ATP-dependent RNA helicase of the DEAD-box protein family; has strong preference for dsRNA; interacts with YRA1; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may be involved in suppression of transcription from cryptic initiation sites [Source:SGD;Acc:S000005056]) HSP 1 Score: 134.42 bits (337), Expect = 1.496e-37 Identity = 64/141 (45.39%), Postives = 88/141 (62.41%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSL 438 + LE S+ K ++FA TKR D I +LR + A+HGDK Q +R+++L FR I+VATDVA+RG+DV I VINYD P EDY+HRIGRTGR G +G + +FF +N +L+ +M EANQ++ L Sbjct: 350 KYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIPPEL 490
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Yeast
Match: DBP3 (RNA-Dependent ATPase, member of DExD/H-box family; involved in cleavage of site A3 within the ITS1 spacer during rRNA processing; not essential for growth, but deletion causes severe slow-growth phenotype [Source:SGD;Acc:S000003046]) HSP 1 Score: 125.946 bits (315), Expect = 2.082e-34 Identity = 64/149 (42.95%), Postives = 96/149 (64.43%), Query Frame = 1 Query: 7 KDKRLLEVVSK---TPR--DKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSL 438 K+++LLE++ K P+ +K+++FA K++A + L+ + V A+HGD SQ R LN F+ N+L+ATDVA+RGLD+ ++K VIN FP+ EDY+HRIGRTGR G++G ++T F + A LV V+ ANQ V + L Sbjct: 341 KERKLLELLKKYHSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVLNGANQPVPEDL 489
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Yeast
Match: FAL1 (Nucleolar protein required for maturation of 18S rRNA; member of the eIF4A subfamily of DEAD-box ATP-dependent RNA helicases; 18S rRNA biogenesis defect of the null mutant is functionally complemented by human EIF4A3 [Source:SGD;Acc:S000002428]) HSP 1 Score: 105.145 bits (261), Expect = 2.313e-27 Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = 1 Query: 52 KMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVK 399 + ++F TK+K D + L F V +MHGD Q +R+ ++N FR + +L++TDV +RG+DV + +VINYD P E+YIHRIGR+GR G+ GV+ F + + R++ K Sbjct: 267 QCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLREIEK 382
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Nematostella
Match: EDO38061 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SDX5]) HSP 1 Score: 153.295 bits (386), Expect = 1.263e-44 Identity = 74/150 (49.33%), Postives = 104/150 (69.33%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAYIPRS 465 +LLE + +K ++F ETKR+AD + LRS + +HGDK+Q +R+++L+ FR + ILVATDVASRGLD+ DIK VIN+DFP EDY+HRIGRT R ++G SYTFF N+K A++LV V++EA Q V+ L +L + R+ Sbjct: 295 KLLEEIMGEKENKTLIFTETKRRADELTRKLRSDGWPAMCIHGDKAQPERDWVLSEFRKGHAPILVATDVASRGLDISDIKFVINFDFPNCTEDYVHRIGRTARSDRTGTSYTFFTVNNAKQAKELVSVLQEAKQHVNPKLLNLQDMARN 444
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Nematostella
Match: EDO27708 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T8H9]) HSP 1 Score: 136.346 bits (342), Expect = 1.795e-37 Identity = 69/149 (46.31%), Postives = 99/149 (66.44%), Query Frame = 1 Query: 7 KDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNR-KNSKSARQLVKVMEEANQSVSDSLYDLA 450 K RL +++ D+ +VF E+KR AD + FL + F ++HGD+ Q +RE L+ FR +L+AT+VA+RGLD+DD+K VIN+D P ++Y+HRIGRTGR G G + TFF R ++ K AR LVKV+ EANQ V + L ++A Sbjct: 457 KRDRLTQILGDA--DRTLVFVESKRSADFLAIFLSGEGFPTTSIHGDRLQQEREEALDDFRKGRCPVLIATNVAARGLDIDDVKHVINFDLPSDIDEYVHRIGRTGRIGNKGKATTFFLRGRDDKVARGLVKVLSEANQEVPEWLEEIA 603
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Nematostella
Match: PL10 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SM49]) HSP 1 Score: 136.732 bits (343), Expect = 1.821e-37 Identity = 67/151 (44.37%), Postives = 101/151 (66.89%), Query Frame = 1 Query: 10 DKR--LLEVVSKT-PRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAY 453 DKR LL++++ + P+ +VF ETK+ AD + FL + ++HGD+SQ +RE L FR + ILVAT VA+RGLD+ ++K VIN+D P E+Y+HRIGRTGR G +G++ +FFN KN A++L+ ++EE+ Q + L +AY Sbjct: 434 DKRSFLLDLLNASGPQQLTLVFVETKKGADALEMFLAKDGYYCTSIHGDRSQREREEALRTFRCGDTPILVATAVAARGLDIPNVKHVINFDLPTDIEEYVHRIGRTGRVGHTGLATSFFNHKNKNVAKELMDILEESKQEIPSWLESMAY 584
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Nematostella
Match: VAS1 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJG3]) HSP 1 Score: 127.102 bits (318), Expect = 1.982e-35 Identity = 71/165 (43.03%), Postives = 100/165 (60.61%), Query Frame = 1 Query: 7 KDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFN-RKNSKSARQLVKVMEEANQSVS---DSLYDLAYIPR-SERRQNFN 486 K +L E++S T D+ +VF E KR AD + ++L F ++ D+ QS+RE L FR NILVAT VA+RGLD+ ++K VINYD P E+Y+HR+GRTGR G G + F+ ++ + AR LVKV+ EA Q V D ++A+ R SER+ F Sbjct: 195 KRDKLHEILSATGTDRTLVFVELKRVADFLAAWLSQNNFPTTSISSDRCQSEREAALRDFRDGRANILVATSVAARGLDIPNVKHVINYDLPQDIEEYVHRVGRTGRIGNEGKATAFYEVGRDDRLARSLVKVLSEALQEVPAWLDEAAEVAFGTRNSERKTLFG 359
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Nematostella
Match: EDO49247 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RGX3]) HSP 1 Score: 120.168 bits (300), Expect = 4.538e-32 Identity = 64/138 (46.38%), Postives = 88/138 (63.77%), Query Frame = 1 Query: 19 LLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSA-RQLVKVMEEANQSVS 429 LLE + KTP +++FAE K D I +L K A+HGDKSQ +R + + F N ++LVATDVAS+GLD DI+ VIN+D P E+Y+HRIGRTGR GK+GV+ TF N+ +S L ++ EA Q ++ Sbjct: 290 LLECLQKTP-PPVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINFDMPEDIENYVHRIGRTGRCGKTGVATTFINKSCEESVLLDLKHLLMEAKQKIT 426
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Medaka
Match: DDX5 (probable ATP-dependent RNA helicase DDX5 [Source:NCBI gene;Acc:101167926]) HSP 1 Score: 152.14 bits (383), Expect = 9.932e-43 Identity = 73/145 (50.34%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 RLLE + +K I+F ETKR+ D + +R + +HGDKSQ +R+++LN FR IL+ATDVASRGLDV+D+K VINYD+P EDYIHRIGRT R K+G +YTFF N K A L+ V+ EANQ+++ L +A Sbjct: 337 RLLEEIMSEKENKTIIFVETKRRCDELTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAGDLISVLREANQAINPKLIQMA 481
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Medaka
Match: ddx5 (probable ATP-dependent RNA helicase DDX5 [Source:NCBI gene;Acc:101160075]) HSP 1 Score: 151.369 bits (381), Expect = 1.960e-42 Identity = 71/145 (48.97%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 RLLE + +K I+F ETKR+ D + +R + +HGDKSQ +R+++LN F+ IL+ATDVASRGLDV+D+K VINYD+P EDYIHRIGRT R K+G +YTFF N + A L+ V+ EANQ+++ L +A Sbjct: 339 RLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKSQQERDWVLNEFKFGKAPILIATDVASRGLDVEDVKFVINYDYPNNSEDYIHRIGRTARSSKTGTAYTFFTANNMRQASDLIAVLREANQAINPKLLQMA 483
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Medaka
Match: ENSORLT00000031911.1 (probable ATP-dependent RNA helicase DDX17 [Source:NCBI gene;Acc:101171584]) HSP 1 Score: 146.747 bits (369), Expect = 7.801e-41 Identity = 68/144 (47.22%), Postives = 97/144 (67.36%), Query Frame = 1 Query: 16 RLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDL 447 +L+E + +K I+F ETK++ D + +R + +HGDKSQ +R+++L+ FR +L+ATDVASRGLDV+D+K VINYD+P EDYIHRIGRT R G +YTFF N + AR+LV+V+EEA Q+++ L L Sbjct: 330 QLMEEIMAEKENKTIIFVETKKRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPVLIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTNKGTAYTFFTPGNVRQARELVRVLEEARQAINPKLLQL 473
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Medaka
Match: si:dkey-156n14.5 (probable ATP-dependent RNA helicase DDX17 [Source:NCBI gene;Acc:101158507]) HSP 1 Score: 145.591 bits (366), Expect = 2.618e-40 Identity = 70/151 (46.36%), Postives = 99/151 (65.56%), Query Frame = 1 Query: 7 KDKRLLEVVSKT---PRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLA 450 KD +LL+++ + +K I+F ETK++ D + +R + +HGDKSQ +R+++L FR IL+ATDVASRGLDV+D+K VINYD+P EDY+HRIGRT R G +YTFF N + AR LV+V+EEA Q+++ L L Sbjct: 327 KDNKLLQLMEEIMAEKENKTIIFVETKKRCDDLTRKMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPSSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLV 477
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Medaka
Match: ddx3xa (DEAD-box helicase 3 X-linked [Source:NCBI gene;Acc:101158982]) HSP 1 Score: 137.502 bits (345), Expect = 1.826e-37 Identity = 71/151 (47.02%), Postives = 101/151 (66.89%), Query Frame = 1 Query: 10 DKR--LLEVVSKTPRDKM-IVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAY 453 DKR LL++++ T +D + +VF ETK+ AD + FL + + ++HGD+SQ DRE L+ FR + ILVAT VA+RGLD+ ++K VIN+D P E+Y+HRIGRTGR G G++ +FFN KNS + L+ ++ EA Q V L LAY Sbjct: 393 DKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGHCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNSNITKDLLDILVEAKQEVPSWLESLAY 543
BLAST of ATP dependent RNA helicase DDX5 vs. Planmine SMEST
Match: SMESG000033908.1 (SMESG000033908.1) HSP 1 Score: 370.933 bits (951), Expect = 1.923e-127 Identity = 200/202 (99.01%), Postives = 202/202 (100.00%), Query Frame = 1 Query: 1 YSKDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAYIPRSERRQNFNRXXXXXXXXXXXXXXXXXXXGGNNMYPQPDLYMQNGAAHH 606 YSKDKRLLEVVSKTPRDKMIVFAETK+KADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAYIPRSER+QNFNRPPMPVPQVNNYQVPPPQYNGGNNMYPQPDLYMQNGAAHH Sbjct: 368 YSKDKRLLEVVSKTPRDKMIVFAETKKKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAYIPRSERKQNFNRPPMPVPQVNNYQVPPPQYNGGNNMYPQPDLYMQNGAAHH 569
BLAST of ATP dependent RNA helicase DDX5 vs. Planmine SMEST
Match: SMESG000033916.1 (SMESG000033916.1) HSP 1 Score: 360.918 bits (925), Expect = 1.107e-123 Identity = 196/198 (98.99%), Postives = 198/198 (100.00%), Query Frame = 1 Query: 1 YSKDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAYIPRSERRQNFNRXXXXXXXXXXXXXXXXXXXGGNNMYPQPDLYMQNG 594 YSKDKRLLEVVSKTPRDKMIVFAETK+KADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAYIPRSER+QNFNRPPMPVPQVNNYQVPPPQYNGGNNMYPQPDLYMQNG Sbjct: 362 YSKDKRLLEVVSKTPRDKMIVFAETKKKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAYIPRSERKQNFNRPPMPVPQVNNYQVPPPQYNGGNNMYPQPDLYMQNG 559
BLAST of ATP dependent RNA helicase DDX5 vs. Planmine SMEST
Match: SMESG000033907.1 (SMESG000033907.1) HSP 1 Score: 320.472 bits (820), Expect = 3.648e-108 Identity = 180/202 (89.11%), Postives = 181/202 (89.60%), Query Frame = 1 Query: 1 YSKDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAYIPRSERRQNFNRXXXXXXXXXXXXXXXXXXXGGNNMYPQPDLYMQNGAAHH 606 YSKDKRLLEVVSKTPRDKMIVFAETK+KADMICSFLRSKQFRVGAMHGDKSQSDREYILN DVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAYIPRSERRQNFNRPPMPV QVNNYQVPPPQYNGGNNMYPQPDLYMQNGAAHH Sbjct: 350 YSKDKRLLEVVSKTPRDKMIVFAETKKKADMICSFLRSKQFRVGAMHGDKSQSDREYILN--------------------DVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAYIPRSERRQNFNRPPMPVLQVNNYQVPPPQYNGGNNMYPQPDLYMQNGAAHH 531
BLAST of ATP dependent RNA helicase DDX5 vs. Planmine SMEST
Match: SMESG000033348.1 (SMESG000033348.1) HSP 1 Score: 238.81 bits (608), Expect = 1.266e-75 Identity = 116/170 (68.24%), Postives = 137/170 (80.59%), Query Frame = 1 Query: 1 YSKDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGL-------------------DVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAY 453 ++KDKRLLE+VSK P DKMIVFAETK+KAD+IC FLRSKQFRVGAMHGDKSQSDR+YIL GFRG++LNILVATDVASRGL ++DDIK+VINYDFP QFEDYIHRIGRTGR+ K+G+SYTFFN NS+SA LVKVME++NQ V ++LY+ + Sbjct: 415 HAKDKRLLEIVSKNPNDKMIVFAETKKKADIICYFLRSKQFRVGAMHGDKSQSDRDYILKGFRGQHLNILVATDVASRGLVIPNYKWVINLNLLAYRYSNIDDIKIVINYDFPNQFEDYIHRIGRTGRKDKTGLSYTFFNENNSRSAASLVKVMEKSNQIVPEALYNFIH 584
BLAST of ATP dependent RNA helicase DDX5 vs. Planmine SMEST
Match: SMESG000033348.1 (SMESG000033348.1) HSP 1 Score: 238.424 bits (607), Expect = 1.639e-75 Identity = 116/170 (68.24%), Postives = 137/170 (80.59%), Query Frame = 1 Query: 1 YSKDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGL-------------------DVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDLAY 453 ++KDKRLLE+VSK P DKMIVFAETK+KAD+IC FLRSKQFRVGAMHGDKSQSDR+YIL GFRG++LNILVATDVASRGL ++DDIK+VINYDFP QFEDYIHRIGRTGR+ K+G+SYTFFN NS+SA LVKVME++NQ V ++LY+ + Sbjct: 408 HAKDKRLLEIVSKNPNDKMIVFAETKKKADIICYFLRSKQFRVGAMHGDKSQSDRDYILKGFRGQHLNILVATDVASRGLVIPNYKWVINLNLLAYRYSNIDDIKIVINYDFPNQFEDYIHRIGRTGRKDKTGLSYTFFNENNSRSAASLVKVMEKSNQIVPEALYNFIH 577 The following BLAST results are available for this feature:
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of ATP dependent RNA helicase DDX5 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of ATP dependent RNA helicase DDX5 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of ATP dependent RNA helicase DDX5 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of ATP dependent RNA helicase DDX5 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30018602 ID=SMED30018602|Name=ATP dependent RNA helicase DDX5|organism=Schmidtea mediterranea sexual|type=transcript|length=607bpback to top protein sequence of SMED30018602-orf-1 >SMED30018602-orf-1 ID=SMED30018602-orf-1|Name=SMED30018602-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=202bp YSKDKRLLEVVSKTPRDKMIVFAETKRKADMICSFLRSKQFRVGAMHGDKback to top Aliases
The feature 'ATP dependent RNA helicase DDX5' has the following synonyms
Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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