ovo

Overview
Nameovo (AFP48372.1)
Smed IDSMED30018592
Uniprot Best hitTranscription factor Ovo-like 2 OS=Mus musculus GN=Ovol2 PE=2 SV=2 (E=7.29055e-34)
Length (bp)1211
Neoblast Clusters

Zeng et. al., 2018


▻ Overview

▻ Neoblast Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of ovo (SMED30018592) t-SNE clustered cells

Violin plots show distribution of expression levels for ovo (SMED30018592) in cells (dots) of each of the 12 neoblast clusters.

 

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Embryonic Expression

Davies et. al., 2017


Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Download CSV of Expression Data

 

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Expression Details

Click to see image symbols and abbreviations
Abbreviation or symbolDefinition
Ooral hemisphere
Aaboral hemisphere
Ddorsal
Vventral
Llateral
black arrowheadembryonic pharynx
red arrowheaddefinitive pharynx
black arrowsprimitive gut
yellow arrowsprimitive ectoderm cells
cyan arrowsbrain
cyan arrowheadsnerve cords
blue arrowheadseye progenitors (trail cells)
purple arrowheadseyes
scale bar100 µm
Homology
BLAST of ovo vs. Ensembl Human
Match: OVOL1 (ovo like transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:8525])

HSP 1 Score: 129.413 bits (324), Expect = 3.415e-34
Identity = 59/122 (48.36%), Postives = 79/122 (64.75%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNS 1143
            + C++C K F  ++ + RH++ H      LC YC K F D++DLKRH R HTGV+PYKC  C + F+QRCSLESH  KIHGV   Y YKERR KLY CE C  ++  +   + H+ + HP+S
Sbjct:   56 FTCRVCQKAFTYQRMLNRHMKCHNDVKRHLCTYCGKGFNDTFDLKRHVRTHTGVRPYKCSLCDKAFTQRCSLESHLKKIHGVQQKYAYKERRAKLYVCEECGCTSESQEGHVLHLKEHHPDS 177          
BLAST of ovo vs. Ensembl Human
Match: OVOL2 (ovo like zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:15804])

HSP 1 Score: 128.642 bits (322), Expect = 2.792e-33
Identity = 59/131 (45.04%), Postives = 81/131 (61.83%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNSLYAKEEALK 1170
            + C +C K F  ++ + RH++ H      LC +C K F D++DLKRH R HTG++PYKC  C + F+QRCSLESH  KIHGV   Y YK+RR+KLY CE C Y+   +     H+   HP S + K+ + K
Sbjct:  119 HSCDLCGKGFRLQRMLNRHLKCHNQVKRHLCTFCGKGFNDTFDLKRHVRTHTGIRPYKCNVCNKAFTQRCSLESHLKKIHGVQQQYAYKQRRDKLYVCEDCGYTGPTQEDLYLHVNSAHPGSSFLKKTSKK 249          
BLAST of ovo vs. Ensembl Human
Match: OVOL1 (ovo like transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:8525])

HSP 1 Score: 127.872 bits (320), Expect = 5.214e-33
Identity = 59/122 (48.36%), Postives = 79/122 (64.75%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNS 1143
            + C++C K F  ++ + RH++ H      LC YC K F D++DLKRH R HTGV+PYKC  C + F+QRCSLESH  KIHGV   Y YKERR KLY CE C  ++  +   + H+ + HP+S
Sbjct:  118 FTCRVCQKAFTYQRMLNRHMKCHNDVKRHLCTYCGKGFNDTFDLKRHVRTHTGVRPYKCSLCDKAFTQRCSLESHLKKIHGVQQKYAYKERRAKLYVCEECGCTSESQEGHVLHLKEHHPDS 239          
BLAST of ovo vs. Ensembl Human
Match: OVOL3 (ovo like zinc finger 3 [Source:HGNC Symbol;Acc:HGNC:14186])

HSP 1 Score: 119.398 bits (298), Expect = 8.533e-31
Identity = 50/112 (44.64%), Postives = 75/112 (66.96%), Query Frame = 1
Query:  784 CKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSH 1119
            C +C K FP ++ + RH++ H      LC+ C K F D++DLKRH R HTG++P++C +C + F+QRCSLE+H  K+HG   +Y Y+ERR KL+ CE C +++S   T+  H
Sbjct:   72 CPLCPKAFPLQRMLTRHLKCHSPVRRHLCRCCGKGFHDAFDLKRHMRTHTGIRPFRCSACGKAFTQRCSLEAHLAKVHGQPASYAYRERREKLHVCEDCGFTSSRPDTYAQH 183          
BLAST of ovo vs. Ensembl Human
Match: OVOL3 (ovo like zinc finger 3 [Source:HGNC Symbol;Acc:HGNC:14186])

HSP 1 Score: 119.783 bits (299), Expect = 1.025e-30
Identity = 50/112 (44.64%), Postives = 75/112 (66.96%), Query Frame = 1
Query:  784 CKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSH 1119
            C +C K FP ++ + RH++ H      LC+ C K F D++DLKRH R HTG++P++C +C + F+QRCSLE+H  K+HG   +Y Y+ERR KL+ CE C +++S   T+  H
Sbjct:   96 CPLCPKAFPLQRMLTRHLKCHSPVRRHLCRCCGKGFHDAFDLKRHMRTHTGIRPFRCSACGKAFTQRCSLEAHLAKVHGQPASYAYRERREKLHVCEDCGFTSSRPDTYAQH 207          
BLAST of ovo vs. Ensembl Celegans
Match: lin-48 (Putative zinc finger transcription factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EDU6])

HSP 1 Score: 135.576 bits (340), Expect = 4.119e-36
Identity = 72/173 (41.62%), Postives = 96/173 (55.49%), Query Frame = 1
Query:  658 DPAKFKLTNGGDGIVNPFRKQFKEERDKSMDKFCI-----------EVNHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNS 1143
            +PA  +  NGG G+ NP           S+    +           E   +  C IC K F  ++ + RHI+ H     +LC +C K F D++DLKRHTR HTGV+PYKC+ C + F+QRCSLESH  K+HGV   Y YKERR+K++ CE C Y+      +LSHI   HP S
Sbjct:   83 NPA-VEFVNGGYGVKNPLAPLISSFETTSIPCSTVSPSSLISSSKDEFQDSLTCHICGKKFGLQRLLNRHIKCHSDLKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCEQCEKSFTQRCSLESHLRKVHGVTHQYAYKERRSKVFVCEDCGYTDEKFEVYLSHIKVVHPFS 254          
BLAST of ovo vs. Ensembl Celegans
Match: Y55F3AM.14 (pep:known chromosome:WBcel235:IV:1058845:1063187:-1 gene:WBGene00021931 transcript:Y55F3AM.14 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y55F3AM.14)

HSP 1 Score: 67.781 bits (164), Expect = 5.021e-12
Identity = 30/74 (40.54%), Postives = 42/74 (56.76%), Query Frame = 1
Query:  784 CKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQ 1005
            C  CNK F     +Q H+R+H     ++CK+C K F    +L+ H R HTG +PY CQ C R F Q+  L +H+
Sbjct:  248 CVYCNKGFAYAGSLQVHVRTHTGERPYVCKFCPKAFASQGNLQSHERTHTGERPYSCQFCQRTFIQKSQLTAHE 321          

HSP 2 Score: 55.8398 bits (133), Expect = 2.756e-8
Identity = 38/134 (28.36%), Postives = 58/134 (43.28%), Query Frame = 1
Query:  784 CKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNY--------------LYKERR---NKLYPCEICSYSTSCKATWLSHIIQEH 1134
            C +C K F     ++ H RSH     + C +C K F     L+ H R HTG +PYKC+ C + F+Q  +   H+   H    NY              LY  ++   +K + C+ C  + + K     H+ Q H
Sbjct:  106 CTVCGKGFSYFSILESHKRSHTGEKPYNCHFCQKTFAQKATLQVHERTHTGERPYKCRYCEKTFAQYGTKTVHEKSAHLGIRNYKCPKCDKLLSSPSALYTHKKTHGDKTFRCDFCPKTFALKNYLKLHVKQVH 239          

HSP 3 Score: 52.7582 bits (125), Expect = 3.247e-7
Identity = 39/141 (27.66%), Postives = 66/141 (46.81%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRS-HGVN-FDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYS----TSCKATWLSHIIQEH---PNSLYAKEEALKG 1173
            ++C  C K F  K +++ H++  H  N    +C YC K F  +  L+ H R HTG +PY C+ C + F+ + +L+SH+    G            + Y C+ C  +    +   A   +H+ Q+H   P+S  A    + G
Sbjct:  216 FRCDFCPKTFALKNYLKLHVKQVHEQNERKHVCVYCNKGFAYAGSLQVHVRTHTGERPYVCKFCPKAFASQGNLQSHERTHTG-----------ERPYSCQFCQRTFIQKSQLTAHESTHLTQKHSVNPDSTTADILPVAG 345          
BLAST of ovo vs. Ensembl Celegans
Match: pag-3 (Uncharacterized protein; Zinc finger protein PAG-3 [Source:UniProtKB/TrEMBL;Acc:G5EDE1])

HSP 1 Score: 65.855 bits (159), Expect = 1.046e-11
Identity = 37/121 (30.58%), Postives = 55/121 (45.45%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPN 1140
            ++CK C K F     +  H+  H     + C+YC K F    D+K+HT +HTG +P+KC  C + FSQ  +L +H  K  G            K + C++C  +   K     H    HP 
Sbjct:  154 FECKQCGKTFKRSSTLSTHLLIHSDTRPYPCEYCGKRFHQKSDMKKHTYIHTGEKPHKCTVCGKAFSQSSNLITHTRKHTGF-----------KPFACDVCGRTFQRKVDRRRHRESHHPG 263          

HSP 2 Score: 52.7582 bits (125), Expect = 1.835e-7
Identity = 28/114 (24.56%), Postives = 53/114 (46.49%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSH 1119
            + C+ C K+F +   +++H + H  +  + CK C K F  S  L  H  +H+  +PY C+ C ++F Q+  ++ H            Y     K + C +C  + S  +  ++H
Sbjct:  126 FHCQKCTKLFSTIAALEQHQQVHVSDKQFECKQCGKTFKRSSTLSTHLLIHSDTRPYPCEYCGKRFHQKSDMKKH-----------TYIHTGEKPHKCTVCGKAFSQSSNLITH 228          
BLAST of ovo vs. Ensembl Celegans
Match: che-1 (Transcription factor che-1 [Source:UniProtKB/Swiss-Prot;Acc:Q966L8])

HSP 1 Score: 62.3882 bits (150), Expect = 4.671e-11
Identity = 38/143 (26.57%), Postives = 61/143 (42.66%), Query Frame = 1
Query:  589 DIVKTIKVKRRNFAEYIKKLYLSDPAKFKLTNGGDGIVNPFRKQFKEERDKSMDKFCIEVNHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIH 1017
            D   ++++ ++      + +  S P  F+    G        K F +  + +  K        + C +CN+ F     +  H R+H     + C  C K F DS  L +H R HTG +PY C  C  KF+Q  +L  H +K H
Sbjct:   80 DPTPSLRLPKKEPLPVQRPMARSTPKPFRCQTCG--------KAFSQAANLTAHKRIHTGEKPFMCPVCNRPFSQSSSLVTHRRTHTGERPYPCAQCEKAFTDSSTLTKHLRTHTGHKPYVCSICMMKFTQSGNLHRH-MKTH 213          
BLAST of ovo vs. Ensembl Celegans
Match: K11D2.4 (pep:known chromosome:WBcel235:I:12526189:12527553:1 gene:WBGene00010770 transcript:K11D2.4d gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:K11D2.4)

HSP 1 Score: 62.3882 bits (150), Expect = 5.792e-11
Identity = 26/69 (37.68%), Postives = 40/69 (57.97%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQR 984
            ++C  C K F ++  +Q+H+R H     ++C +C K F     L +H R+HTGV+P+ C  C R F QR
Sbjct:   29 HECDRCGKRFKARGGLQQHMRIHNNEKAYVCTFCAKSFTQKSHLDQHERIHTGVKPFLCAFCGRSFRQR 97          
BLAST of ovo vs. Ensembl Fly
Match: ovo (ovo [Source:FlyBase gene name;Acc:FBgn0003028])

HSP 1 Score: 130.568 bits (327), Expect = 6.014e-32
Identity = 58/125 (46.40%), Postives = 79/125 (63.20%), Query Frame = 1
Query:  769 NHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNS 1143
            N+ + C++C K F  ++ + RH++ H     +LC +C K F D++DLKRHTR HTGV+PYKC  C + F+QRCSLESH  K+H V   Y YKERR K+Y CE C ++T        H+   HP S
Sbjct: 1065 NNKFVCRVCMKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCQKVHSVQHQYAYKERRAKMYVCEECGHTTCEPEVHYLHLKNNHPFS 1189          
BLAST of ovo vs. Ensembl Fly
Match: ovo (ovo [Source:FlyBase gene name;Acc:FBgn0003028])

HSP 1 Score: 125.946 bits (315), Expect = 1.355e-30
Identity = 57/123 (46.34%), Postives = 78/123 (63.41%), Query Frame = 1
Query:  769 NHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHP 1137
            N+ + C++C K F  ++ + RH++ H     +LC +C K F D++DLKRHTR HTGV+PYKC  C + F+QRCSLESH  K+H V   Y YKERR K+Y CE C ++T        H+   HP
Sbjct:  871 NNKFVCRVCMKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCQKVHSVQHQYAYKERRAKMYVCEECGHTTCEPEVHYLHLKNNHP 993          
BLAST of ovo vs. Ensembl Fly
Match: ovo (ovo [Source:FlyBase gene name;Acc:FBgn0003028])

HSP 1 Score: 125.946 bits (315), Expect = 1.427e-30
Identity = 57/123 (46.34%), Postives = 78/123 (63.41%), Query Frame = 1
Query:  769 NHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHP 1137
            N+ + C++C K F  ++ + RH++ H     +LC +C K F D++DLKRHTR HTGV+PYKC  C + F+QRCSLESH  K+H V   Y YKERR K+Y CE C ++T        H+   HP
Sbjct:  818 NNKFVCRVCMKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCQKVHSVQHQYAYKERRAKMYVCEECGHTTCEPEVHYLHLKNNHP 940          
BLAST of ovo vs. Ensembl Fly
Match: ovo (ovo [Source:FlyBase gene name;Acc:FBgn0003028])

HSP 1 Score: 125.176 bits (313), Expect = 3.296e-30
Identity = 57/123 (46.34%), Postives = 78/123 (63.41%), Query Frame = 1
Query:  769 NHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHP 1137
            N+ + C++C K F  ++ + RH++ H     +LC +C K F D++DLKRHTR HTGV+PYKC  C + F+QRCSLESH  K+H V   Y YKERR K+Y CE C ++T        H+   HP
Sbjct: 1194 NNKFVCRVCMKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCQKVHSVQHQYAYKERRAKMYVCEECGHTTCEPEVHYLHLKNNHP 1316          
BLAST of ovo vs. Ensembl Fly
Match: ovo (ovo [Source:FlyBase gene name;Acc:FBgn0003028])

HSP 1 Score: 125.176 bits (313), Expect = 3.296e-30
Identity = 57/123 (46.34%), Postives = 78/123 (63.41%), Query Frame = 1
Query:  769 NHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHP 1137
            N+ + C++C K F  ++ + RH++ H     +LC +C K F D++DLKRHTR HTGV+PYKC  C + F+QRCSLESH  K+H V   Y YKERR K+Y CE C ++T        H+   HP
Sbjct: 1194 NNKFVCRVCMKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCQKVHSVQHQYAYKERRAKMYVCEECGHTTCEPEVHYLHLKNNHP 1316          
BLAST of ovo vs. Ensembl Zebrafish
Match: ovol1 (ovo-like zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-031010-37])

HSP 1 Score: 144.436 bits (363), Expect = 9.716e-39
Identity = 64/131 (48.85%), Postives = 87/131 (66.41%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNSLYAKEEALK 1170
            Y C++C KVF  ++ + RH++ H      LC +C K F D++DLKRH R HTGV+PYKC+ C + F+QRCSLESH  KIHGV   Y YKERR+KLY CE C ++ S +   L H+  EHPNS + + +  +
Sbjct:  159 YVCQVCQKVFQFQRMLNRHLKCHSEQKRHLCDFCGKGFNDTFDLKRHVRTHTGVRPYKCELCDKAFTQRCSLESHMKKIHGVTQQYAYKERRSKLYVCEECGHTASTQDALLRHLHTEHPNSAFLRAKGAR 289          
BLAST of ovo vs. Ensembl Zebrafish
Match: OVOL1 (ovo like transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:8525])

HSP 1 Score: 127.872 bits (320), Expect = 4.606e-33
Identity = 54/127 (42.52%), Postives = 81/127 (63.78%), Query Frame = 1
Query:  766 VNHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNSL 1146
             +    C++C K F + + ++RH++ H     + C++C K F D++DLKRH R HTGV+PYKC  C + F+QRCSLE+H  KIH V   Y +KERR+KLY CE C  +   + +  +H+  +HP+ L
Sbjct:  133 ADSGLSCQVCQKTFTTARMLKRHLKCHSETKKYSCEHCGKGFNDTFDLKRHVRTHTGVRPYKCTMCAKAFTQRCSLEAHLKKIHAVTQQYAFKERRDKLYVCEECGLTAQTRESLQNHLQAQHPHRL 259          
BLAST of ovo vs. Ensembl Zebrafish
Match: ENSDART00000169455.1 (pep:novel chromosome:GRCz10:10:347797:348108:1 gene:ENSDARG00000100197.1 transcript:ENSDART00000169455.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 80.4925 bits (197), Expect = 5.937e-18
Identity = 36/85 (42.35%), Postives = 55/85 (64.71%), Query Frame = 1
Query:  931 TGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNS----LYAKEEALKG 1173
             G++PY+C  C + F+QRCSLESH  KIHGV   Y Y++RR+K++ CE C +++S    +  H+ Q+HP S     Y ++  L+G
Sbjct:    1 AGIRPYRCDLCEKAFTQRCSLESHLRKIHGVQQQYAYRQRRSKIFVCEDCGFTSSRPDQYFLHVRQQHPGSPALRRYYRKHMLEG 85          
BLAST of ovo vs. Ensembl Zebrafish
Match: zbtb16a (zinc finger and BTB domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-030131-1989])

HSP 1 Score: 77.411 bits (189), Expect = 7.053e-15
Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 1
Query:  775 NYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESH 1002
            +Y C  CN+ FPS   ++RH+RSH  +  + C++C   F D   LK H R+HTG +PY+C  C +KFS +  LE+H
Sbjct:  514 SYICSECNRTFPSHTALKRHLRSHTGDHPFECEFCGSCFRDESTLKGHKRIHTGEKPYECNGCGKKFSLKHQLETH 589          

HSP 2 Score: 56.225 bits (134), Expect = 3.531e-8
Identity = 26/78 (33.33%), Postives = 42/78 (53.85%), Query Frame = 1
Query:  784 CKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIH 1017
            C +C K F ++  +Q+H+  H     ++C  C + F     LKRH R HTG  P++C+ C   F    +L+ H+ +IH
Sbjct:  489 CLLCGKRFQTQTALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTGDHPFECEFCGSCFRDESTLKGHK-RIH 565          
BLAST of ovo vs. Ensembl Zebrafish
Match: zgc:174315 (zgc:174315 [Source:ZFIN;Acc:ZDB-GENE-080219-29])

HSP 1 Score: 74.3294 bits (181), Expect = 8.750e-15
Identity = 43/132 (32.58%), Postives = 63/132 (47.73%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHG----------------VALNY-LYKERRNKLYPCEICSYSTSCKATWLSHI 1122
            + CK C K +  K +   H+R H     + C+ C K F ++ +L  H R+HTG +PY C  C R F+Q  +LE H     G                 ALNY +    R K +PC+ C  S  CKA+ ++H+
Sbjct:  110 FTCKECGKSYSQKSNFNVHMRVHTGERPYSCQQCGKSFYNTGNLAVHMRIHTGEKPYSCHQCGRSFNQNGTLEIHMRTHTGEKPFICTECGEGFICQSALNYHMISHSREKPFPCDQCGKSFICKASLMNHM 241          
BLAST of ovo vs. Ensembl Xenopus
Match: ovol2 (ovo-like zinc finger 2 [Source:Xenbase;Acc:XB-GENE-854193])

HSP 1 Score: 133.265 bits (334), Expect = 2.648e-35
Identity = 60/131 (45.80%), Postives = 82/131 (62.60%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNSLYAKEEALK 1170
            Y C+IC K F  ++ + RH++ H      LC +C K F D++DLKRH R HTG++PYKC+ C + F+QRCSLESH  KIHGV   Y YK+RR+KL+ CE C Y+   +     H+   HP S + K+   K
Sbjct:  131 YSCEICAKGFRLQRMLNRHLKCHNQVKRHLCTFCGKGFNDTFDLKRHVRTHTGIRPYKCEICNKAFTQRCSLESHLKKIHGVQQGYAYKQRRDKLFVCEDCGYTGPSQEDLYLHVYDSHPGSAFLKKTTKK 261          
BLAST of ovo vs. Ensembl Xenopus
Match: ovol1 (ovo-like zinc finger 1 [Source:Xenbase;Acc:XB-GENE-5964939])

HSP 1 Score: 129.798 bits (325), Expect = 3.036e-34
Identity = 59/122 (48.36%), Postives = 79/122 (64.75%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNS 1143
            + C +C K F  ++ + RH++ H       C++C K F D++DLKRH R HTGV+PYKC  C + F+QRCSLESH  KIHGV  NY YKERR KLY CE C ++   + + L H+  +HP S
Sbjct:  116 FHCALCEKSFSFQRMLNRHMKCHSEVKRHRCEHCGKGFNDTFDLKRHVRTHTGVRPYKCHLCEKAFTQRCSLESHLKKIHGVQQNYAYKERRTKLYVCEDCGFTADSQESQLHHLQDQHPTS 237          
BLAST of ovo vs. Ensembl Xenopus
Match: OVOL3 (ovo like zinc finger 3 [Source:HGNC Symbol;Acc:HGNC:14186])

HSP 1 Score: 126.331 bits (316), Expect = 5.805e-33
Identity = 54/121 (44.63%), Postives = 79/121 (65.29%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPN 1140
            + C+ C K FP ++ + RH + H +     C  C K F D++DLKRH R HTG++PYKC  C + F+QRCSLESH  KIHG+  NY Y++RR+K+Y CE C +++     +  H+++ HPN
Sbjct:  119 FSCRACRKCFPLQRMLTRHQKCHSIQKRHHCPCCSKGFNDTFDLKRHMRTHTGIRPYKCPVCDKSFTQRCSLESHLRKIHGILQNYAYRQRRSKIYVCEECGFTSPNADNYTLHVVEVHPN 239          
BLAST of ovo vs. Ensembl Xenopus
Match: OVOL3 (ovo like zinc finger 3 [Source:HGNC Symbol;Acc:HGNC:14186])

HSP 1 Score: 124.02 bits (310), Expect = 3.331e-32
Identity = 54/121 (44.63%), Postives = 79/121 (65.29%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPN 1140
            + C+ C K FP ++ + RH + H +     C  C K F D++DLKRH R HTG++PYKC  C + F+QRCSLESH  KIHG+  NY Y++RR+K+Y CE C +++     +  H+++ HPN
Sbjct:  110 FSCRACRKCFPLQRMLTRHQKCHSIQKRHHCPCCSKGFNDTFDLKRHMRTHTGIRPYKCPVCDKSFTQRCSLESHLRKIHGILQNYAYRQRRSKIYVCEECGFTSPNADNYTLHVVEVHPN 230          
BLAST of ovo vs. Ensembl Xenopus
Match: ZBTB16 (zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930])

HSP 1 Score: 77.7962 bits (190), Expect = 2.772e-15
Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 1
Query:  775 NYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESH 1002
            +Y C  CN+ FPS   ++RH+RSH  +  + C++C   F D   LK H R+HTG +PY+C  C +KFS +  LE+H
Sbjct:  505 SYICSECNRTFPSHTALKRHLRSHTGDHPYECEFCGSCFRDESTLKGHKRIHTGEKPYECNGCGKKFSLKHQLETH 580          

HSP 2 Score: 58.151 bits (139), Expect = 5.032e-9
Identity = 27/78 (34.62%), Postives = 42/78 (53.85%), Query Frame = 1
Query:  784 CKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIH 1017
            C +C K F ++  +Q+H+  H     ++C  C + F     LKRH R HTG  PY+C+ C   F    +L+ H+ +IH
Sbjct:  480 CLLCGKRFQTQTALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTGDHPYECEFCGSCFRDESTLKGHK-RIH 556          

HSP 3 Score: 47.7506 bits (112), Expect = 9.162e-6
Identity = 22/81 (27.16%), Postives = 41/81 (50.62%), Query Frame = 1
Query:  769 NHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHT--GVQPYKCQSCTRKFSQRCSLESHQ 1005
            N + +C +C    P    ++ H + H     + C+ C K F+DS  L+ H   H+  G + + C+ C  +FS+  + E+H+
Sbjct:  388 NLSERCSVCGANLPDNDSVEHHRKLHSGMKTYGCELCGKRFLDSLRLRMHLLAHSAAGAKAFVCEQCGAQFSKEDAYEAHR 468          
BLAST of ovo vs. Ensembl Mouse
Match: Ovol2 (ovo like zinc finger 2 [Source:MGI Symbol;Acc:MGI:1338039])

HSP 1 Score: 132.494 bits (332), Expect = 4.005e-35
Identity = 67/165 (40.61%), Postives = 94/165 (56.97%), Query Frame = 1
Query:  679 TNGGDGIVNPFRKQFKEERDKSMDKFCI-EVNHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNSLYAKEEALK 1170
              G DG +   ++     + K     C   V HN  C +C K F  ++ + RH++ H      LC +C K F D++DLKRH R HTG++PYKC+ C + F+QRCSLESH  KIHGV   Y YK+RR+KLY CE C Y+   +     H+  +HP S + K+ + K
Sbjct:   53 AQGTDGHLAAMQRPVARSKIKFTTGTCDNSVIHN--CDLCGKSFRLQRMLNRHLKCHNQVKRHLCTFCGKGFNDTFDLKRHVRTHTGIRPYKCEVCNKAFTQRCSLESHLKKIHGVQQQYAYKQRRDKLYVCEDCGYTGPTQEDLYLHVNSDHPGSTFLKKTSKK 215          
BLAST of ovo vs. Ensembl Mouse
Match: Ovol2 (ovo like zinc finger 2 [Source:MGI Symbol;Acc:MGI:1338039])

HSP 1 Score: 132.494 bits (332), Expect = 9.361e-35
Identity = 67/165 (40.61%), Postives = 94/165 (56.97%), Query Frame = 1
Query:  679 TNGGDGIVNPFRKQFKEERDKSMDKFCI-EVNHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNSLYAKEEALK 1170
              G DG +   ++     + K     C   V HN  C +C K F  ++ + RH++ H      LC +C K F D++DLKRH R HTG++PYKC+ C + F+QRCSLESH  KIHGV   Y YK+RR+KLY CE C Y+   +     H+  +HP S + K+ + K
Sbjct:   86 AQGTDGHLAAMQRPVARSKIKFTTGTCDNSVIHN--CDLCGKSFRLQRMLNRHLKCHNQVKRHLCTFCGKGFNDTFDLKRHVRTHTGIRPYKCEVCNKAFTQRCSLESHLKKIHGVQQQYAYKQRRDKLYVCEDCGYTGPTQEDLYLHVNSDHPGSTFLKKTSKK 248          
BLAST of ovo vs. Ensembl Mouse
Match: Ovol1 (ovo like zinc finger 1 [Source:MGI Symbol;Acc:MGI:1330290])

HSP 1 Score: 127.102 bits (318), Expect = 6.918e-33
Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNS 1143
            + C IC K F  ++ + RH++ H      LC YC K F D++DLKRH R HTGV+PYKC  C + F+QRCSLESH  KIHGV   Y YKERR KLY CE C  ++  +   + H+ + HP+S
Sbjct:  118 FTCHICQKSFTHQRMLNRHMKCHNDVKRHLCTYCGKGFNDTFDLKRHVRTHTGVRPYKCSLCDKAFTQRCSLESHLKKIHGVQQKYAYKERRAKLYVCEECGCTSESQEGHVLHLKERHPDS 239          
BLAST of ovo vs. Ensembl Mouse
Match: Ovol3 (ovo like zinc finger 3 [Source:MGI Symbol;Acc:MGI:2388075])

HSP 1 Score: 119.398 bits (298), Expect = 6.493e-31
Identity = 49/112 (43.75%), Postives = 74/112 (66.07%), Query Frame = 1
Query:  784 CKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSH 1119
            C +C K FP ++ + RH++ H      +C YC K F D++DLKRH R HTG++P++C +C + F+QRCSLE+H  K+HG   +Y Y+ERR KL+ CE C +++S    +  H
Sbjct:   71 CPLCPKAFPLQRMLTRHLKCHSPARRHVCHYCGKGFHDAFDLKRHMRTHTGIRPFRCGACGKAFTQRCSLEAHLAKVHGQPASYAYRERREKLHVCEDCGFTSSRPDAYAQH 182          
BLAST of ovo vs. Ensembl Mouse
Match: Mynn (myoneurin [Source:MGI Symbol;Acc:MGI:1931415])

HSP 1 Score: 78.9518 bits (193), Expect = 2.038e-15
Identity = 61/218 (27.98%), Postives = 90/218 (41.28%), Query Frame = 1
Query:  493 ETVSENLWLEKVKVEKYFHLIENLSQSQENIE--------------DIVKTIKVKRRN--------FAEYIKKLYLSDPAKFKLTNGGDGIVNPFRKQFKEERDKSMDKFCIEVNHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEIC 1080
            E+ S  L+LE  K+     ++E + Q  ++ E              DIV+T+ VKR+           E+      S  + ++L N G+ +   F K       K M            C  C KVF     ++RH+R H     ++C  C K F     LK H R HTG +PYKC+ C + F+Q+C L  H    HG            K Y C++C
Sbjct:  205 ESASVELFLETSKLSSP--VVEQIIQGNDSSELELTSVVENTFPTQDIVQTVTVKRKRRKSQSHCALKEHSMSNIASVKSPYELENAGEELDARFSKA------KPM------------CNTCGKVFSEASSLRRHMRIHKGVKPYVCHLCGKAFTQCNQLKTHVRTHTGERPYKCELCDKGFAQKCQLVFHSRMHHG----------EEKPYKCDVC 392          

HSP 2 Score: 60.077 bits (144), Expect = 2.356e-9
Identity = 31/104 (29.81%), Postives = 49/104 (47.12%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYS 1089
            Y+C +CN  F +  +++ H R H     ++C  C + F  +  L  H R HTG +PY C +C + F+   SL +H  K  G            + + CE+C  S
Sbjct:  387 YKCDVCNLQFATSSNLKIHARKHSGEKPYVCDRCGQRFAQASTLTYHVRRHTGEKPYVCDTCGKAFAVSSSLITHSRKHTG-----------ERPFICELCGNS 479          

HSP 3 Score: 58.5362 bits (140), Expect = 6.413e-9
Identity = 34/115 (29.57%), Postives = 55/115 (47.83%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIR-SHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSH 1119
            Y+C++C+K F  K  +  H R  HG    + C  C   F  S +LK H R H+G +PY C  C ++F+Q  +L  H  +  G            K Y C+ C  + +  ++ ++H
Sbjct:  358 YKCELCDKGFAQKCQLVFHSRMHHGEEKPYKCDVCNLQFATSSNLKIHARKHSGEKPYVCDRCGQRFAQASTLTYHVRRHTG-----------EKPYVCDTCGKAFAVSSSLITH 461          

HSP 4 Score: 54.299 bits (129), Expect = 1.395e-7
Identity = 25/80 (31.25%), Postives = 40/80 (50.00%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIH 1017
            Y C  C + F     +  H+R H     ++C  C K F  S  L  H+R HTG +P+ C+ C   ++   +L+ H+ K+H
Sbjct:  415 YVCDRCGQRFAQASTLTYHVRRHTGEKPYVCDTCGKAFAVSSSLITHSRKHTGERPFICELCGNSYTDIKNLKKHKTKVH 494          
BLAST of ovo vs. UniProt
Match: sp|Q8CIV7|OVOL2_MOUSE (Transcription factor Ovo-like 2 OS=Mus musculus GN=Ovol2 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 7.291e-34
Identity = 67/165 (40.61%), Postives = 94/165 (56.97%), Query Frame = 1
Query:  679 TNGGDGIVNPFRKQFKEERDKSMDKFCI-EVNHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNSLYAKEEALK 1170
              G DG +   ++     + K     C   V HN  C +C K F  ++ + RH++ H      LC +C K F D++DLKRH R HTG++PYKC+ C + F+QRCSLESH  KIHGV   Y YK+RR+KLY CE C Y+   +     H+  +HP S + K+ + K
Sbjct:   86 AQGTDGHLAAMQRPVARSKIKFTTGTCDNSVIHN--CDLCGKSFRLQRMLNRHLKCHNQVKRHLCTFCGKGFNDTFDLKRHVRTHTGIRPYKCEVCNKAFTQRCSLESHLKKIHGVQQQYAYKQRRDKLYVCEDCGYTGPTQEDLYLHVNSDHPGSTFLKKTSKK 248          
BLAST of ovo vs. UniProt
Match: sp|Q9BRP0|OVOL2_HUMAN (Transcription factor Ovo-like 2 OS=Homo sapiens GN=OVOL2 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.434e-32
Identity = 59/131 (45.04%), Postives = 81/131 (61.83%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNSLYAKEEALK 1170
            + C +C K F  ++ + RH++ H      LC +C K F D++DLKRH R HTG++PYKC  C + F+QRCSLESH  KIHGV   Y YK+RR+KLY CE C Y+   +     H+   HP S + K+ + K
Sbjct:  119 HSCDLCGKGFRLQRMLNRHLKCHNQVKRHLCTFCGKGFNDTFDLKRHVRTHTGIRPYKCNVCNKAFTQRCSLESHLKKIHGVQQQYAYKQRRDKLYVCEDCGYTGPTQEDLYLHVNSAHPGSSFLKKTSKK 249          
BLAST of ovo vs. UniProt
Match: sp|O14753|OVOL1_HUMAN (Putative transcription factor Ovo-like 1 OS=Homo sapiens GN=OVOL1 PE=2 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 2.679e-32
Identity = 59/122 (48.36%), Postives = 79/122 (64.75%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNS 1143
            + C++C K F  ++ + RH++ H      LC YC K F D++DLKRH R HTGV+PYKC  C + F+QRCSLESH  KIHGV   Y YKERR KLY CE C  ++  +   + H+ + HP+S
Sbjct:  118 FTCRVCQKAFTYQRMLNRHMKCHNDVKRHLCTYCGKGFNDTFDLKRHVRTHTGVRPYKCSLCDKAFTQRCSLESHLKKIHGVQQKYAYKERRAKLYVCEECGCTSESQEGHVLHLKEHHPDS 239          
BLAST of ovo vs. UniProt
Match: sp|A2VDT4|OVOL1_BOVIN (Putative transcription factor Ovo-like 1 OS=Bos taurus GN=OVOL1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 3.708e-32
Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNS 1143
            + C IC K F  ++ + RH++ H      LC YC K F D++DLKRH R HTGV+PYKC  C + F+QRCSLESH  KIHGV   Y YKERR KLY CE C  ++  +   + H+ + HP+S
Sbjct:  118 FTCHICQKAFTYQRMLNRHMKCHNDVKRHLCTYCGKGFNDTFDLKRHVRTHTGVRPYKCSLCDKAFTQRCSLESHLKKIHGVQQKYAYKERRAKLYVCEECGCTSESQEGHVLHLKEHHPDS 239          
BLAST of ovo vs. UniProt
Match: sp|Q9WTJ2|OVOL1_MOUSE (Putative transcription factor Ovo-like 1 OS=Mus musculus GN=Ovol1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 5.388e-32
Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = 1
Query:  778 YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNS 1143
            + C IC K F  ++ + RH++ H      LC YC K F D++DLKRH R HTGV+PYKC  C + F+QRCSLESH  KIHGV   Y YKERR KLY CE C  ++  +   + H+ + HP+S
Sbjct:  118 FTCHICQKSFTHQRMLNRHMKCHNDVKRHLCTYCGKGFNDTFDLKRHVRTHTGVRPYKCSLCDKAFTQRCSLESHLKKIHGVQQKYAYKERRAKLYVCEECGCTSESQEGHVLHLKERHPDS 239          
BLAST of ovo vs. TrEMBL
Match: tr|J7FM12|J7FM12_SCHMD (Ovo OS=Schmidtea mediterranea PE=2 SV=1)

HSP 1 Score: 749.584 bits (1934), Expect = 0.000e+0
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 1
Query:  100 MSIFLISTLLANDDEMPTDLSSKTEKIENHEKSERNLCKYSSQFLSCFYSQEMLTLLMRKNFINQYSFYLKIFSGFPQFVDNFNLVNPTDFTVNSNSTTILPSFNFHKTSLNIEMNTSLANSSSTGRSSPTETVSENLWLEKVKVEKYFHLIENLSQSQENIEDIVKTIKVKRRNFAEYIKKLYLSDPAKFKLTNGGDGIVNPFRKQFKEERDKSMDKFCIEVNHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNSLYAKEEALKGKYN 1182
            MSIFLISTLLANDDEMPTDLSSKTEKIENHEKSERNLCKYSSQFLSCFYSQEMLTLLMRKNFINQYSFYLKIFSGFPQFVDNFNLVNPTDFTVNSNSTTILPSFNFHKTSLNIEMNTSLANSSSTGRSSPTETVSENLWLEKVKVEKYFHLIENLSQSQENIEDIVKTIKVKRRNFAEYIKKLYLSDPAKFKLTNGGDGIVNPFRKQFKEERDKSMDKFCIEVNHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNSLYAKEEALKGKYN
Sbjct:    1 MSIFLISTLLANDDEMPTDLSSKTEKIENHEKSERNLCKYSSQFLSCFYSQEMLTLLMRKNFINQYSFYLKIFSGFPQFVDNFNLVNPTDFTVNSNSTTILPSFNFHKTSLNIEMNTSLANSSSTGRSSPTETVSENLWLEKVKVEKYFHLIENLSQSQENIEDIVKTIKVKRRNFAEYIKKLYLSDPAKFKLTNGGDGIVNPFRKQFKEERDKSMDKFCIEVNHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNSLYAKEEALKGKYN 361          
BLAST of ovo vs. TrEMBL
Match: tr|T1KIW9|T1KIW9_TETUR (Uncharacterized protein OS=Tetranychus urticae PE=4 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.021e-39
Identity = 77/218 (35.32%), Postives = 121/218 (55.50%), Query Frame = 1
Query:  496 TVSENLWLEKVKVEKYFHLIENLSQSQENIEDIVKTIKVKRRNFAEYIKKLYLSDPAKFKLTNGGDGIVNPFRK--QFKEERDKSMDKFCIEVNHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNS 1143
            T++  ++ + ++  + +   E  +    NIE + + +K+  R F+              K  NGG GI NP     + K     S+D          +C +C + FP  + ++RH+++H    ++LC +C K F D++DLK+HTR HTGV+PYKC  C + F+QRCSLESH +KIHG++ +Y Y+ERR KLY CE C  +T+   T   H+   HP+S
Sbjct:  136 TITAEMYAQAIESARNYRYSEGRASFAPNIESLAEKLKIPLRMFSS------------IKFVNGGHGIKNPILSYGKLKPAIQPSLDD-------PLKCPVCAQRFPKPRCLKRHLKNHSDVKEYLCTFCGKGFNDTFDLKKHTRTHTGVRPYKCDHCEKSFAQRCSLESHTLKIHGISHSYAYRERRTKLYVCEACGNTTNKPETHYLHLKNNHPDS 334          
BLAST of ovo vs. TrEMBL
Match: tr|R7U4Z5|R7U4Z5_CAPTE (Uncharacterized protein OS=Capitella teleta GN=CAPTEDRAFT_147941 PE=4 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 4.104e-39
Identity = 71/161 (44.10%), Postives = 102/161 (63.35%), Query Frame = 1
Query:  664 AKFKLTNGGDGIVNPFRKQFKEERDKSMDKFCIEVNHN-YQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNS 1143
             K ++ NGG G+ NP     +  R+      CI+ N N +QC++C+KVFP ++ + RH++ H     +LC +C K F D++DLKRHTR HTGV+PYKC+ C + F+QRCSLESH  K+H   +++ YKERR KLY CE C ++T        H+   HP+S
Sbjct:  123 PKIEVVNGGYGVKNPLLGNREFPREAPSTDLCIQTNDNKFQCRVCSKVFPLQRLLNRHVKCHSDIKRYLCSFCGKGFNDTFDLKRHTRTHTGVRPYKCEMCEKAFTQRCSLESHCRKVHNYQISFAYKERRAKLYVCEECGHTTEDPEKHYLHLKDTHPHS 283          
BLAST of ovo vs. TrEMBL
Match: tr|A0A1I8IAF1|A0A1I8IAF1_9PLAT (Uncharacterized protein OS=Macrostomum lignano PE=4 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 5.695e-39
Identity = 77/170 (45.29%), Postives = 102/170 (60.00%), Query Frame = 1
Query:  682 NGGDGIVNPF-----RKQFKEERDKSMDKFCIEVNHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQ----EHPNSLYAKEEA 1164
            N G+G+ NP      R+    +R     +     N  Y+C+IC K F  ++ + RH++ H     +LC YC K F D++DLKRHTR HTGV+PYKC  C + F+QRCSLESH  K+HG AL + +KERR KL+ CE+C +ST+C    LSH  Q    E P S  A EEA
Sbjct:  142 NNGNGVKNPLAEAECRRASGAQRGGLGAQL---PNGQYECRICQKRFSLQRLLNRHLKCHSTLKRFLCSYCGKGFNDTFDLKRHTRTHTGVRPYKCTECGKAFTQRCSLESHARKLHGRALGFGHKERREKLHVCELCGHSTACARQHLSHAKQHQQAERPASSAATEEA 308          
BLAST of ovo vs. TrEMBL
Match: tr|A0A1I8IWG8|A0A1I8IWG8_9PLAT (Uncharacterized protein OS=Macrostomum lignano PE=4 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 8.553e-39
Identity = 77/170 (45.29%), Postives = 102/170 (60.00%), Query Frame = 1
Query:  682 NGGDGIVNPF-----RKQFKEERDKSMDKFCIEVNHNYQCKICNKVFPSKKHMQRHIRSHGVNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLESHQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQ----EHPNSLYAKEEA 1164
            N G+G+ NP      R+    +R     +     N  Y+C+IC K F  ++ + RH++ H     +LC YC K F D++DLKRHTR HTGV+PYKC  C + F+QRCSLESH  K+HG AL + +KERR KL+ CE+C +ST+C    LSH  Q    E P S  A EEA
Sbjct:  142 NNGNGVKNPLAEAECRRASGAQRGGLGAQL---PNGQYECRICQKRFSLQRLLNRHLKCHSTLKRFLCSYCGKGFNDTFDLKRHTRTHTGVRPYKCTECGKAFTQRCSLESHARKLHGRALGFGHKERREKLHVCELCGHSTACARQHLSHAKQHQQAERPASSAATEEA 308          
The following BLAST results are available for this feature:
BLAST of ovo vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Ensembl Human)
Total hits: 5
Match NameE-valueIdentityDescription
OVOL13.415e-3448.36ovo like transcriptional repressor 1 [Source:HGNC ... [more]
OVOL22.792e-3345.04ovo like zinc finger 2 [Source:HGNC Symbol;Acc:HGN... [more]
OVOL15.214e-3348.36ovo like transcriptional repressor 1 [Source:HGNC ... [more]
OVOL38.533e-3144.64ovo like zinc finger 3 [Source:HGNC Symbol;Acc:HGN... [more]
OVOL31.025e-3044.64ovo like zinc finger 3 [Source:HGNC Symbol;Acc:HGN... [more]
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BLAST of ovo vs. Ensembl Celegans
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Ensembl Celegan)
Total hits: 5
Match NameE-valueIdentityDescription
lin-484.119e-3641.62Putative zinc finger transcription factor; Unchara... [more]
Y55F3AM.145.021e-1240.54pep:known chromosome:WBcel235:IV:1058845:1063187:-... [more]
pag-31.046e-1130.58Uncharacterized protein; Zinc finger protein PAG-3... [more]
che-14.671e-1126.57Transcription factor che-1 [Source:UniProtKB/Swis... [more]
K11D2.45.792e-1137.68pep:known chromosome:WBcel235:I:12526189:12527553:... [more]
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BLAST of ovo vs. Ensembl Fly
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Ensembl Drosophila)
Total hits: 5
Match NameE-valueIdentityDescription
ovo6.014e-3246.40ovo [Source:FlyBase gene name;Acc:FBgn0003028][more]
ovo1.355e-3046.34ovo [Source:FlyBase gene name;Acc:FBgn0003028][more]
ovo1.427e-3046.34ovo [Source:FlyBase gene name;Acc:FBgn0003028][more]
ovo3.296e-3046.34ovo [Source:FlyBase gene name;Acc:FBgn0003028][more]
ovo3.296e-3046.34ovo [Source:FlyBase gene name;Acc:FBgn0003028][more]
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BLAST of ovo vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Ensembl Zebrafish)
Total hits: 5
Match NameE-valueIdentityDescription
ovol19.716e-3948.85ovo-like zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-0... [more]
OVOL14.606e-3342.52ovo like transcriptional repressor 1 [Source:HGNC ... [more]
ENSDART00000169455.15.937e-1842.35pep:novel chromosome:GRCz10:10:347797:348108:1 gen... [more]
zbtb16a7.053e-1543.42zinc finger and BTB domain containing 16a [Source:... [more]
zgc:1743158.750e-1532.58zgc:174315 [Source:ZFIN;Acc:ZDB-GENE-080219-29][more]
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BLAST of ovo vs. Ensembl Xenopus
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Ensembl Xenopus)
Total hits: 5
Match NameE-valueIdentityDescription
ovol22.648e-3545.80ovo-like zinc finger 2 [Source:Xenbase;Acc:XB-GENE... [more]
ovol13.036e-3448.36ovo-like zinc finger 1 [Source:Xenbase;Acc:XB-GENE... [more]
OVOL35.805e-3344.63ovo like zinc finger 3 [Source:HGNC Symbol;Acc:HGN... [more]
OVOL33.331e-3244.63ovo like zinc finger 3 [Source:HGNC Symbol;Acc:HGN... [more]
ZBTB162.772e-1543.42zinc finger and BTB domain containing 16 [Source:H... [more]
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BLAST of ovo vs. Ensembl Mouse
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Ensembl Mouse)
Total hits: 5
Match NameE-valueIdentityDescription
Ovol24.005e-3540.61ovo like zinc finger 2 [Source:MGI Symbol;Acc:MGI:... [more]
Ovol29.361e-3540.61ovo like zinc finger 2 [Source:MGI Symbol;Acc:MGI:... [more]
Ovol16.918e-3349.18ovo like zinc finger 1 [Source:MGI Symbol;Acc:MGI:... [more]
Ovol36.493e-3143.75ovo like zinc finger 3 [Source:MGI Symbol;Acc:MGI:... [more]
Mynn2.038e-1527.98myoneurin [Source:MGI Symbol;Acc:MGI:1931415][more]
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BLAST of ovo vs. UniProt
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q8CIV7|OVOL2_MOUSE7.291e-3440.61Transcription factor Ovo-like 2 OS=Mus musculus GN... [more]
sp|Q9BRP0|OVOL2_HUMAN1.434e-3245.04Transcription factor Ovo-like 2 OS=Homo sapiens GN... [more]
sp|O14753|OVOL1_HUMAN2.679e-3248.36Putative transcription factor Ovo-like 1 OS=Homo s... [more]
sp|A2VDT4|OVOL1_BOVIN3.708e-3249.18Putative transcription factor Ovo-like 1 OS=Bos ta... [more]
sp|Q9WTJ2|OVOL1_MOUSE5.388e-3249.18Putative transcription factor Ovo-like 1 OS=Mus mu... [more]
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BLAST of ovo vs. TrEMBL
Analysis Date: 2017-05-17 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
tr|J7FM12|J7FM12_SCHMD0.000e+0100.00Ovo OS=Schmidtea mediterranea PE=2 SV=1[more]
tr|T1KIW9|T1KIW9_TETUR3.021e-3935.32Uncharacterized protein OS=Tetranychus urticae PE=... [more]
tr|R7U4Z5|R7U4Z5_CAPTE4.104e-3944.10Uncharacterized protein OS=Capitella teleta GN=CAP... [more]
tr|A0A1I8IAF1|A0A1I8IAF1_9PLAT5.695e-3945.29Uncharacterized protein OS=Macrostomum lignano PE=... [more]
tr|A0A1I8IWG8|A0A1I8IWG8_9PLAT8.553e-3945.29Uncharacterized protein OS=Macrostomum lignano PE=... [more]
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InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2016-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.681
NoneNo IPR availableSUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 268..316
NoneNo IPR availableSUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 239..277
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.604
IPR015880Zinc finger, C2H2-likeSMARTSM00355c2h2final6coord: 335..358
e-value: 0.73
score: 18.9
coord: 296..319
e-value: 0.18
score: 20.9
coord: 268..290
e-value: 0.5
score: 19.4
coord: 240..262
e-value: 8.6E-6
score: 35.2
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 297..319
e-value: 6.0E-5
score: 22.3
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 270..296
e-value: 1.5E-9
score: 37.3
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 239..262
e-value: 1.8E-4
score: 20.6
IPR007087Zinc finger, C2H2PFAMPF00096zf-C2H2coord: 240..262
e-value: 4.6E-6
score: 26.7
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 242..262
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 298..319
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 270..290
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 268..295
score: 12.882
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 240..262
score: 11.344
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 296..319
score: 10.949

Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR015880Znf_C2H2-like
IPR013087Znf_C2H2/integrase_DNA-bd
IPR007087Znf_C2H2
Vocabulary: molecular function
TermDefinition
GO:0003676nucleic acid binding
GO:0046872metal ion binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
Vocabulary: biological process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000017photoreceptor neuron
PLANA:0000124visual system
PLANA:0000031pigment cup cell
PLANA:0000075optic cup
PLANA:0000095trail cell
PLANA:0000036eye
Vocabulary: Schmidtea mediterranea Developmental Stages
TermDefinition
PLANA:0000008Stage 8
PLANA:0000006Stage 6
PLANA:0000007Stage 7
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30018592 ID=SMED30018592|Name=ovo|organism=Schmidtea mediterranea sexual|type=transcript|length=1211bp
GTCATATTGAACACTGAGACTAGCTATCAATAGCTGACAATTAGACGTAT
AAAATGTTAGGGTACGCCTTTTTGGCCATTATTTCACACCAAAATTTCCA
TGAGTATTTTTCTAATAAGCACTCTACTCGCAAACGATGACGAAATGCCC
ACAGATTTGTCATCGAAAACTGAAAAGATTGAAAACCATGAAAAATCTGA
AAGGAATCTCTGCAAGTATTCCAGTCAGTTTCTTTCCTGTTTTTATTCAC
AGGAAATGTTGACACTACTTATGAGAAAAAATTTCATCAATCAATATTCA
TTTTATTTAAAGATTTTCTCGGGGTTTCCACAATTCGTCGATAACTTCAA
CTTAGTAAATCCAACAGATTTCACCGTCAATTCAAATTCAACAACAATTT
TGCCCTCATTCAACTTCCATAAAACGTCATTGAATATCGAAATGAACACC
TCACTGGCCAATTCTTCAAGCACTGGTAGGTCGTCTCCAACTGAAACTGT
GTCTGAAAATCTTTGGTTAGAAAAAGTAAAGGTGGAAAAATATTTCCATT
TAATTGAAAATCTATCACAATCCCAAGAGAACATTGAAGACATTGTCAAA
ACGATCAAAGTCAAACGAAGAAATTTTGCTGAATATATTAAGAAACTTTA
CCTAAGTGATCCAGCCAAATTTAAGTTGACAAATGGTGGAGATGGAATAG
TAAATCCATTTAGAAAACAATTCAAAGAAGAACGAGATAAATCTATGGAC
AAATTTTGCATCGAAGTTAATCACAATTATCAATGTAAGATATGTAACAA
GGTGTTTCCTTCCAAAAAGCACATGCAACGTCATATACGTTCACACGGTG
TAAATTTTGATTGGTTGTGTAAATATTGTTTTAAACCGTTTATTGATTCC
TACGATTTAAAACGACATACGAGAGTCCATACAGGAGTTCAACCATACAA
ATGTCAAAGTTGCACAAGAAAATTCAGTCAACGATGCTCATTGGAAAGTC
ATCAGGTGAAAATCCATGGAGTAGCACTGAATTATCTATACAAAGAAAGA
AGGAACAAGTTGTATCCGTGTGAAATCTGCAGTTATAGTACGTCTTGTAA
AGCAACTTGGTTGAGTCACATCATTCAGGAGCACCCGAATTCACTTTATG
CAAAAGAAGAAGCACTCAAAGGAAAATACAACTGACTTTGAAAAATATTG
ATTTTTCAAGC
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protein sequence of SMED30018592-orf-1

>SMED30018592-orf-1 ID=SMED30018592-orf-1|Name=SMED30018592-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=362bp
MSIFLISTLLANDDEMPTDLSSKTEKIENHEKSERNLCKYSSQFLSCFYS
QEMLTLLMRKNFINQYSFYLKIFSGFPQFVDNFNLVNPTDFTVNSNSTTI
LPSFNFHKTSLNIEMNTSLANSSSTGRSSPTETVSENLWLEKVKVEKYFH
LIENLSQSQENIEDIVKTIKVKRRNFAEYIKKLYLSDPAKFKLTNGGDGI
VNPFRKQFKEERDKSMDKFCIEVNHNYQCKICNKVFPSKKHMQRHIRSHG
VNFDWLCKYCFKPFIDSYDLKRHTRVHTGVQPYKCQSCTRKFSQRCSLES
HQVKIHGVALNYLYKERRNKLYPCEICSYSTSCKATWLSHIIQEHPNSLY
AKEEALKGKYN*
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Aliases
The feature 'ovo' has the following synonyms
Synonym
ovo
Cross References
External references for this transcript
DatabaseAccession
SmedGD GBrowseSMED30018592
GenBankAFP48372.1