CUGBP, Elav-like family member 4
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30018441 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 9
Homology
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Human
Match: CELF3 (CUGBP Elav-like family member 3 [Source:HGNC Symbol;Acc:HGNC:11967]) HSP 1 Score: 402.519 bits (1033), Expect = 1.210e-132 Identity = 230/504 (45.63%), Postives = 309/504 (61.31%), Query Frame = 2 Query: 443 KDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGG-NIYGQTILDNQLS----PPRIFNPVAALS-FQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGG----SGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 K+ DAIKLFVGQIPR L+E DL+P+FE++G+I+E ++++DK TG+HKGCAFLTYC R S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGML K QT+EDVR++F+ FG I+ECTVLR +G SKGCAFVKF + EA AAI+ LH S+T+ GASSS+VVKFADTEKER R++QQ+ L M S +AL Q G + Y Q ++ Q + +P+A ++ Q+Q + + + G+ I P++G + +AA + + L G N + P P+ + + N +Q+ PV + Q A G Q + +A ++Y + AFP P Q Q+ ++ GP+ CN+FIYHLP EF D ++LQMF PFG + SAKV+VDRATNQSKCFGFVS+ N A AQAAIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 2 KEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLG-MFSPIAL-QFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAI-NANGLIATPITPSSGTSTPPAIAATPVSAIPAAL----------GVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPL-------------------QQAYAGMQ----HYTAAYPAAYSLV---APAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK-DANRPY 465
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Human
Match: CELF3 (CUGBP Elav-like family member 3 [Source:HGNC Symbol;Acc:HGNC:11967]) HSP 1 Score: 377.096 bits (967), Expect = 7.727e-123 Identity = 220/493 (44.62%), Postives = 298/493 (60.45%), Query Frame = 2 Query: 476 QIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGG-NIYGQTILDNQLS----PPRIFNPVAALS-FQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGG----SGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 QIPR L+E DL+P+FE++G+I+E ++++DK TG+HKGCAFLTYC R S+ Q ALH+QK+LPGM RP+QVKPA E + + RKLFVGML K QT+EDVR++F+ FG I+ECTVLR +G SKGCAFVKF + EA AAI+ LH S+T+ GASSS+VVKFADTEKER R++QQ+ L M S +AL Q G + Y Q ++ Q + +P+A ++ Q+Q + + + G+ I P++G + +AA + + L G N + P P+ + + N +Q+ PV + Q A G Q + +A ++Y + AFP P Q Q+ ++ GP+ CN+FIYHLP EF D ++LQMF PFG + SAKV+VDRATNQSKCFGFVS+ N A AQAAIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 15 QIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGD-RKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLG-MFSPIAL-QFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAI-NANGLIATPITPSSGTSTPPAIAATPVSAIPAAL----------GVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPL-------------------QQAYAGMQ----HYTAAYPAAYSLV---APAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK-DANRPY 466 HSP 2 Score: 62.3882 bits (150), Expect = 1.597e-9 Identity = 33/90 (36.67%), Postives = 51/90 (56.67%), Query Frame = 2 Query: 461 KLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKL 730 KLFVG + + + D+R MFE +G I E ++LR G KGCAF+ + ++A LH ++LPG + L VK A E++ R++ Sbjct: 97 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 185
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Human
Match: CELF1 (CUGBP Elav-like family member 1 [Source:HGNC Symbol;Acc:HGNC:2549]) HSP 1 Score: 328.946 bits (842), Expect = 4.836e-104 Identity = 211/503 (41.95%), Postives = 300/503 (59.64%), Query Frame = 2 Query: 446 DSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGI--HKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERK--TEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGS------GPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 D DAIK+FVGQ+PR+ E DLR +FE+YG +YE ++LRD+ KGC F+T+ R+++ Q ALH+ K LPGM P+Q+KPA E+ E+RKLF+GM++K TE D+R +F SFG+IEEC +LR +G S+GCAFV F+++ A AI A+H +QTM+G SS +VVKFADT+K+++ ++ + L ++ A + GN+ G N L P + AL LQQT+ +L ++ S++P G A L + ++ A + +G N LT + + +++T+ G S SS + S N P+ ++ + ++ + SL A L G SS S+ + ++ A A+ I Q+ + L Q L + G+ GPE NLFIYHLP EFGD DLLQMF PFG + SAKV++D+ TN SKCFGFVSY N AQAAIQ+MNGFQ+G+KRLKVQLKR K+DS KPY Sbjct: 12 DLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKR---MAQQLQQQMQQISAASVWGNLAGL----NTLGPQYL-----AL---LQQTASSGNLNTLS--SLHPMGGLN-----AMQLQNLAALAAAASAAQNTPSGTNALTTSSS--PLSVLTSSGSSPSSSSSNSVN---PIASLGALQTLAGATAGLNVGSLAGMAALNGGL---GSSGLSNGTGSTMEALTQAYSG-IQQYAAAALPTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDS-KPY 482
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Human
Match: CELF1 (CUGBP Elav-like family member 1 [Source:HGNC Symbol;Acc:HGNC:2549]) HSP 1 Score: 328.561 bits (841), Expect = 5.907e-104 Identity = 206/503 (40.95%), Postives = 296/503 (58.85%), Query Frame = 2 Query: 446 DSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGI--HKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERK--TEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGS------GPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 D DAIK+FVGQ+PR+ E DLR +FE+YG +YE ++LRD+ KGC F+T+ R+++ Q ALH+ K LPGM P+Q+KPA E+ E+RKLF+GM++K TE D+R +F SFG+IEEC +LR +G S+GCAFV F+++ A AI A+H +QTM+G SS +VVKFADT+K+++ ++ + L ++ A + GN+ G N L P + AL LQQT+ +L ++ S++P G A L + ++ A + +G N LT + + S ++S+ + S + + V I S + L+ + +++ A + SS S+ + ++ A A+ I Q+ + L Q L + G+ GPE NLFIYHLP EFGD DLLQMF PFG + SAKV++D+ TN SKCFGFVSY N AQAAIQ+MNGFQ+G+KRLKVQLKR K+DS KPY Sbjct: 12 DLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKR---MAQQLQQQMQQISAASVWGNLAGL----NTLGPQYL-----AL---LQQTASSGNLNTLS--SLHPMGGLN-----AMQLQNLAALAAAASAAQNTPSGTNALTTSSSPLSV-------LTSSAGSSPSSSSSNSVNPIASLGALQTLAGATAGLNVGSLAGMAALNGGLGSSGLSNGTGSTMEALTQAYSG-IQQYAAAALPTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDS-KPY 483
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Human
Match: CELF1 (CUGBP Elav-like family member 1 [Source:HGNC Symbol;Acc:HGNC:2549]) HSP 1 Score: 328.561 bits (841), Expect = 5.907e-104 Identity = 206/503 (40.95%), Postives = 296/503 (58.85%), Query Frame = 2 Query: 446 DSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGI--HKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERK--TEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGS------GPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 D DAIK+FVGQ+PR+ E DLR +FE+YG +YE ++LRD+ KGC F+T+ R+++ Q ALH+ K LPGM P+Q+KPA E+ E+RKLF+GM++K TE D+R +F SFG+IEEC +LR +G S+GCAFV F+++ A AI A+H +QTM+G SS +VVKFADT+K+++ ++ + L ++ A + GN+ G N L P + AL LQQT+ +L ++ S++P G A L + ++ A + +G N LT + + S ++S+ + S + + V I S + L+ + +++ A + SS S+ + ++ A A+ I Q+ + L Q L + G+ GPE NLFIYHLP EFGD DLLQMF PFG + SAKV++D+ TN SKCFGFVSY N AQAAIQ+MNGFQ+G+KRLKVQLKR K+DS KPY Sbjct: 12 DLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKR---MAQQLQQQMQQISAASVWGNLAGL----NTLGPQYL-----AL---LQQTASSGNLNTLS--SLHPMGGLN-----AMQLQNLAALAAAASAAQNTPSGTNALTTSSSPLSV-------LTSSAGSSPSSSSSNSVNPIASLGALQTLAGATAGLNVGSLAGMAALNGGLGSSGLSNGTGSTMEALTQAYSG-IQQYAAAALPTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDS-KPY 483
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Celegans
Match: unc-75 (Putative RNA-binding protein [Source:UniProtKB/TrEMBL;Acc:G5EE68]) HSP 1 Score: 275.404 bits (703), Expect = 2.400e-84 Identity = 132/226 (58.41%), Postives = 172/226 (76.11%), Query Frame = 2 Query: 443 KDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEER-------KTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGG--NIYGQTILDNQLS 1093 KD DAIKLFVGQIPR+L+E DLR +FE++G+IYEF+IL+DK TG+HKGCAFLTYCHR S+ CQ LHDQK+LPGM R +QVKPA + K +++KLF+GML+K Q+E++VR LF +FGE++E TVLR +G SKGCAFVK+ ++A AISALHGSQTM GASSS+VVK+ADTEKERQ R++QQ+ + ++N L + Q+G N Y Q + L+ Sbjct: 24 KDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHGLDAHMAISALHGSQTMPGASSSLVVKYADTEKERQNRRMQQMAAQMGMLNPML-VNQVGMQYNAYQQVLQQQSLA 248 HSP 2 Score: 66.6254 bits (161), Expect = 3.277e-11 Identity = 30/43 (69.77%), Postives = 38/43 (88.37%), Query Frame = 2 Query: 1796 GFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 GFVSY N+ +QAAI AMNGFQ+G+KRLKVQLKRP+++S +PY Sbjct: 423 GFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRNES-RPY 464
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Celegans
Match: etr-1 (ELAV-Type RNA binding-protein family [Source:UniProtKB/TrEMBL;Acc:A0A0K3AR37]) HSP 1 Score: 208.764 bits (530), Expect = 2.692e-58 Identity = 95/190 (50.00%), Postives = 133/190 (70.00%), Query Frame = 2 Query: 416 NGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTR 985 N S S D+DAIK+FVGQIPR E+D R +FE+YG ++ +ILRDK T KGC F+T+ HR+ + Q ALH+ K + GM P+Q+KPA E + ERKLF+G L+K EE++R +F FG IE+C+VLRDQ+G S+GCAFV F+++ A+ A +H SQTM+G S+ +VVKFADT+K++ + Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR-NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229 HSP 2 Score: 122.479 bits (306), Expect = 8.073e-29 Identity = 58/91 (63.74%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 1652 GPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 GP+ NLFIYHLP +FGD DL+ F+PFG I SAKV++D+ TN SKCFGFVSY N A AI AMNGFQ+G KRLKVQL K D PY Sbjct: 497 GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL---KVDRGNPY 584 HSP 3 Score: 81.6481 bits (200), Expect = 8.446e-16 Identity = 43/118 (36.44%), Postives = 66/118 (55.93%), Query Frame = 2 Query: 641 LHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGN-SKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKL 991 ++ + + P A V P+ E T+ K+FVG + + E D RRLF+ +G + C +LRD++ SKGC FV F + +A+ A ALH + ++G + +K ADTE R RKL Sbjct: 28 INAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTE-NRNERKL 144
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Celegans
Match: etr-1 (ELAV-Type RNA binding-protein family [Source:UniProtKB/TrEMBL;Acc:A0A0K3AR37]) HSP 1 Score: 208.764 bits (530), Expect = 2.692e-58 Identity = 95/190 (50.00%), Postives = 133/190 (70.00%), Query Frame = 2 Query: 416 NGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTR 985 N S S D+DAIK+FVGQIPR E+D R +FE+YG ++ +ILRDK T KGC F+T+ HR+ + Q ALH+ K + GM P+Q+KPA E + ERKLF+G L+K EE++R +F FG IE+C+VLRDQ+G S+GCAFV F+++ A+ A +H SQTM+G S+ +VVKFADT+K++ + Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR-NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229 HSP 2 Score: 122.479 bits (306), Expect = 8.073e-29 Identity = 58/91 (63.74%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 1652 GPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 GP+ NLFIYHLP +FGD DL+ F+PFG I SAKV++D+ TN SKCFGFVSY N A AI AMNGFQ+G KRLKVQL K D PY Sbjct: 497 GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL---KVDRGNPY 584 HSP 3 Score: 81.6481 bits (200), Expect = 8.446e-16 Identity = 43/118 (36.44%), Postives = 66/118 (55.93%), Query Frame = 2 Query: 641 LHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGN-SKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKL 991 ++ + + P A V P+ E T+ K+FVG + + E D RRLF+ +G + C +LRD++ SKGC FV F + +A+ A ALH + ++G + +K ADTE R RKL Sbjct: 28 INAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTE-NRNERKL 144
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Celegans
Match: etr-1 (ELAV-Type RNA binding-protein family [Source:UniProtKB/TrEMBL;Acc:A0A0K3AR37]) HSP 1 Score: 208.764 bits (530), Expect = 2.692e-58 Identity = 95/190 (50.00%), Postives = 133/190 (70.00%), Query Frame = 2 Query: 416 NGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTR 985 N S S D+DAIK+FVGQIPR E+D R +FE+YG ++ +ILRDK T KGC F+T+ HR+ + Q ALH+ K + GM P+Q+KPA E + ERKLF+G L+K EE++R +F FG IE+C+VLRDQ+G S+GCAFV F+++ A+ A +H SQTM+G S+ +VVKFADT+K++ + Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR-NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229 HSP 2 Score: 122.479 bits (306), Expect = 8.073e-29 Identity = 58/91 (63.74%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 1652 GPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 GP+ NLFIYHLP +FGD DL+ F+PFG I SAKV++D+ TN SKCFGFVSY N A AI AMNGFQ+G KRLKVQL K D PY Sbjct: 497 GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL---KVDRGNPY 584 HSP 3 Score: 81.6481 bits (200), Expect = 8.446e-16 Identity = 43/118 (36.44%), Postives = 66/118 (55.93%), Query Frame = 2 Query: 641 LHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGN-SKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKL 991 ++ + + P A V P+ E T+ K+FVG + + E D RRLF+ +G + C +LRD++ SKGC FV F + +A+ A ALH + ++G + +K ADTE R RKL Sbjct: 28 INAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTE-NRNERKL 144
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Celegans
Match: etr-1 (ELAV-Type RNA binding-protein family [Source:UniProtKB/TrEMBL;Acc:A0A0K3AR37]) HSP 1 Score: 208.764 bits (530), Expect = 2.692e-58 Identity = 95/190 (50.00%), Postives = 133/190 (70.00%), Query Frame = 2 Query: 416 NGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTR 985 N S S D+DAIK+FVGQIPR E+D R +FE+YG ++ +ILRDK T KGC F+T+ HR+ + Q ALH+ K + GM P+Q+KPA E + ERKLF+G L+K EE++R +F FG IE+C+VLRDQ+G S+GCAFV F+++ A+ A +H SQTM+G S+ +VVKFADT+K++ + Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR-NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229 HSP 2 Score: 122.479 bits (306), Expect = 8.073e-29 Identity = 58/91 (63.74%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 1652 GPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 GP+ NLFIYHLP +FGD DL+ F+PFG I SAKV++D+ TN SKCFGFVSY N A AI AMNGFQ+G KRLKVQL K D PY Sbjct: 497 GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL---KVDRGNPY 584 HSP 3 Score: 81.6481 bits (200), Expect = 8.446e-16 Identity = 43/118 (36.44%), Postives = 66/118 (55.93%), Query Frame = 2 Query: 641 LHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGN-SKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKL 991 ++ + + P A V P+ E T+ K+FVG + + E D RRLF+ +G + C +LRD++ SKGC FV F + +A+ A ALH + ++G + +K ADTE R RKL Sbjct: 28 INAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTE-NRNERKL 144
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Fly
Match: bru1 (gene:FBgn0000114 transcript:FBtr0331646) HSP 1 Score: 331.257 bits (848), Expect = 4.852e-104 Identity = 221/512 (43.16%), Postives = 290/512 (56.64%), Query Frame = 2 Query: 446 DSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISA-LHGSQTMQGASSSIVVKFADTEKERQTRKLQQL-INPLNLM-NSSLALAQLGGNIYGQTILDN---QLSPPRIFNPVAALSFQLQQ---TSGLPS--LAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISN-----LSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFP---APIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 D D IK+FVGQ+P+S+ ES LR MFEEYG ++ ++LRDK TGI KGC F+T+ R ++ Q ALH+ K+L GM P+Q+KPA E + ERKLFVGMLNK E DVR+LF+ G IEECTVLRDQNG SKGCAFV F+++ A++AI L ++ M+G +S +VVKFADT+KE++ +K+QQ+ N NL N ++ L Q ++ IL N Q SP + + S QL Q GL L +TGL ++ VAA A LL+P+ + Q N + A +T P SN++ A A+ SAQ++N SD S Y + G +P FG A +P+ S + K +E GPE CNLFIYHLP EF D DL F PFG + SAKV++D+ T+ SKCFGFVS+ N AQ AI+AMNGFQ+G KRLKVQLK+PK DS KPY Sbjct: 116 DPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENR-NERKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNLASNINIPLGQTATSVT-TPILPNPPQQPSPVLGADAITPASIQLLQQLQAVGLQHQLLQALTGLGAQQSSSATDTSAVAA--AGLLTPM--TVQ---------------NLAAIAAMTQPSLSNAAAAAAAATS-------PGSAQLTNTAALLWSDPNPMASAYMSTAAG------------------LPQFGSASALSTSPLASVALSAAAAAAAGKQIE------GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKAMNGFQVGTKRLKVQLKKPK-DS-KPY 573 HSP 2 Score: 72.4034 bits (176), Expect = 7.756e-13 Identity = 43/131 (32.82%), Postives = 69/131 (52.67%), Query Frame = 2 Query: 698 KEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQ-NGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQ 1087 ++E + K+FVG + K+ E +R +F+ +G + VLRD+ G SKGC FV F ++ AL A ALH +T+ G I +K AD+E + + ++N N L ++ G I T+L +Q Sbjct: 112 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQ 242 HSP 3 Score: 70.0922 bits (170), Expect = 3.660e-12 Identity = 36/98 (36.73%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 440 SKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSS-EACQRALHDQKSLPGMARPLQVKPAKEERKTEERKL 730 S++ + KLFVG + + L E+D+R +FE +G I E ++LRD+ G KGCAF+T+ + ++ A + L K + G PL VK A +++ E++K+ Sbjct: 201 SENRNERKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQ-NGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKI 297
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Fly
Match: bru1 (gene:FBgn0000114 transcript:FBtr0331998) HSP 1 Score: 331.257 bits (848), Expect = 4.852e-104 Identity = 221/512 (43.16%), Postives = 290/512 (56.64%), Query Frame = 2 Query: 446 DSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISA-LHGSQTMQGASSSIVVKFADTEKERQTRKLQQL-INPLNLM-NSSLALAQLGGNIYGQTILDN---QLSPPRIFNPVAALSFQLQQ---TSGLPS--LAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISN-----LSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFP---APIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 D D IK+FVGQ+P+S+ ES LR MFEEYG ++ ++LRDK TGI KGC F+T+ R ++ Q ALH+ K+L GM P+Q+KPA E + ERKLFVGMLNK E DVR+LF+ G IEECTVLRDQNG SKGCAFV F+++ A++AI L ++ M+G +S +VVKFADT+KE++ +K+QQ+ N NL N ++ L Q ++ IL N Q SP + + S QL Q GL L +TGL ++ VAA A LL+P+ + Q N + A +T P SN++ A A+ SAQ++N SD S Y + G +P FG A +P+ S + K +E GPE CNLFIYHLP EF D DL F PFG + SAKV++D+ T+ SKCFGFVS+ N AQ AI+AMNGFQ+G KRLKVQLK+PK DS KPY Sbjct: 116 DPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENR-NERKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNLASNINIPLGQTATSVT-TPILPNPPQQPSPVLGADAITPASIQLLQQLQAVGLQHQLLQALTGLGAQQSSSATDTSAVAA--AGLLTPM--TVQ---------------NLAAIAAMTQPSLSNAAAAAAAATS-------PGSAQLTNTAALLWSDPNPMASAYMSTAAG------------------LPQFGSASALSTSPLASVALSAAAAAAAGKQIE------GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKAMNGFQVGTKRLKVQLKKPK-DS-KPY 573 HSP 2 Score: 72.4034 bits (176), Expect = 7.756e-13 Identity = 43/131 (32.82%), Postives = 69/131 (52.67%), Query Frame = 2 Query: 698 KEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQ-NGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQ 1087 ++E + K+FVG + K+ E +R +F+ +G + VLRD+ G SKGC FV F ++ AL A ALH +T+ G I +K AD+E + + ++N N L ++ G I T+L +Q Sbjct: 112 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQ 242 HSP 3 Score: 70.0922 bits (170), Expect = 3.660e-12 Identity = 36/98 (36.73%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 440 SKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSS-EACQRALHDQKSLPGMARPLQVKPAKEERKTEERKL 730 S++ + KLFVG + + L E+D+R +FE +G I E ++LRD+ G KGCAF+T+ + ++ A + L K + G PL VK A +++ E++K+ Sbjct: 201 SENRNERKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQ-NGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKI 297
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Fly
Match: bru1 (gene:FBgn0000114 transcript:FBtr0331648) HSP 1 Score: 331.257 bits (848), Expect = 4.852e-104 Identity = 221/512 (43.16%), Postives = 290/512 (56.64%), Query Frame = 2 Query: 446 DSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISA-LHGSQTMQGASSSIVVKFADTEKERQTRKLQQL-INPLNLM-NSSLALAQLGGNIYGQTILDN---QLSPPRIFNPVAALSFQLQQ---TSGLPS--LAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISN-----LSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFP---APIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 D D IK+FVGQ+P+S+ ES LR MFEEYG ++ ++LRDK TGI KGC F+T+ R ++ Q ALH+ K+L GM P+Q+KPA E + ERKLFVGMLNK E DVR+LF+ G IEECTVLRDQNG SKGCAFV F+++ A++AI L ++ M+G +S +VVKFADT+KE++ +K+QQ+ N NL N ++ L Q ++ IL N Q SP + + S QL Q GL L +TGL ++ VAA A LL+P+ + Q N + A +T P SN++ A A+ SAQ++N SD S Y + G +P FG A +P+ S + K +E GPE CNLFIYHLP EF D DL F PFG + SAKV++D+ T+ SKCFGFVS+ N AQ AI+AMNGFQ+G KRLKVQLK+PK DS KPY Sbjct: 116 DPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENR-NERKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNLASNINIPLGQTATSVT-TPILPNPPQQPSPVLGADAITPASIQLLQQLQAVGLQHQLLQALTGLGAQQSSSATDTSAVAA--AGLLTPM--TVQ---------------NLAAIAAMTQPSLSNAAAAAAAATS-------PGSAQLTNTAALLWSDPNPMASAYMSTAAG------------------LPQFGSASALSTSPLASVALSAAAAAAAGKQIE------GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKAMNGFQVGTKRLKVQLKKPK-DS-KPY 573 HSP 2 Score: 72.4034 bits (176), Expect = 7.756e-13 Identity = 43/131 (32.82%), Postives = 69/131 (52.67%), Query Frame = 2 Query: 698 KEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQ-NGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQ 1087 ++E + K+FVG + K+ E +R +F+ +G + VLRD+ G SKGC FV F ++ AL A ALH +T+ G I +K AD+E + + ++N N L ++ G I T+L +Q Sbjct: 112 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQ 242 HSP 3 Score: 70.0922 bits (170), Expect = 3.660e-12 Identity = 36/98 (36.73%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 440 SKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSS-EACQRALHDQKSLPGMARPLQVKPAKEERKTEERKL 730 S++ + KLFVG + + L E+D+R +FE +G I E ++LRD+ G KGCAF+T+ + ++ A + L K + G PL VK A +++ E++K+ Sbjct: 201 SENRNERKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQ-NGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKI 297
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Fly
Match: bru1 (gene:FBgn0000114 transcript:FBtr0331647) HSP 1 Score: 331.257 bits (848), Expect = 4.852e-104 Identity = 221/512 (43.16%), Postives = 290/512 (56.64%), Query Frame = 2 Query: 446 DSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISA-LHGSQTMQGASSSIVVKFADTEKERQTRKLQQL-INPLNLM-NSSLALAQLGGNIYGQTILDN---QLSPPRIFNPVAALSFQLQQ---TSGLPS--LAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISN-----LSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFP---APIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 D D IK+FVGQ+P+S+ ES LR MFEEYG ++ ++LRDK TGI KGC F+T+ R ++ Q ALH+ K+L GM P+Q+KPA E + ERKLFVGMLNK E DVR+LF+ G IEECTVLRDQNG SKGCAFV F+++ A++AI L ++ M+G +S +VVKFADT+KE++ +K+QQ+ N NL N ++ L Q ++ IL N Q SP + + S QL Q GL L +TGL ++ VAA A LL+P+ + Q N + A +T P SN++ A A+ SAQ++N SD S Y + G +P FG A +P+ S + K +E GPE CNLFIYHLP EF D DL F PFG + SAKV++D+ T+ SKCFGFVS+ N AQ AI+AMNGFQ+G KRLKVQLK+PK DS KPY Sbjct: 116 DPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENR-NERKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNLASNINIPLGQTATSVT-TPILPNPPQQPSPVLGADAITPASIQLLQQLQAVGLQHQLLQALTGLGAQQSSSATDTSAVAA--AGLLTPM--TVQ---------------NLAAIAAMTQPSLSNAAAAAAAATS-------PGSAQLTNTAALLWSDPNPMASAYMSTAAG------------------LPQFGSASALSTSPLASVALSAAAAAAAGKQIE------GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKAMNGFQVGTKRLKVQLKKPK-DS-KPY 573 HSP 2 Score: 72.4034 bits (176), Expect = 7.756e-13 Identity = 43/131 (32.82%), Postives = 69/131 (52.67%), Query Frame = 2 Query: 698 KEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQ-NGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQ 1087 ++E + K+FVG + K+ E +R +F+ +G + VLRD+ G SKGC FV F ++ AL A ALH +T+ G I +K AD+E + + ++N N L ++ G I T+L +Q Sbjct: 112 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQ 242 HSP 3 Score: 70.0922 bits (170), Expect = 3.660e-12 Identity = 36/98 (36.73%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 440 SKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSS-EACQRALHDQKSLPGMARPLQVKPAKEERKTEERKL 730 S++ + KLFVG + + L E+D+R +FE +G I E ++LRD+ G KGCAF+T+ + ++ A + L K + G PL VK A +++ E++K+ Sbjct: 201 SENRNERKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQ-NGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKI 297
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Fly
Match: bru1 (gene:FBgn0000114 transcript:FBtr0080345) HSP 1 Score: 330.487 bits (846), Expect = 1.913e-103 Identity = 221/512 (43.16%), Postives = 290/512 (56.64%), Query Frame = 2 Query: 446 DSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISA-LHGSQTMQGASSSIVVKFADTEKERQTRKLQQL-INPLNLM-NSSLALAQLGGNIYGQTILDN---QLSPPRIFNPVAALSFQLQQ---TSGLPS--LAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISN-----LSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFP---APIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 D D IK+FVGQ+P+S+ ES LR MFEEYG ++ ++LRDK TGI KGC F+T+ R ++ Q ALH+ K+L GM P+Q+KPA E + ERKLFVGMLNK E DVR+LF+ G IEECTVLRDQNG SKGCAFV F+++ A++AI L ++ M+G +S +VVKFADT+KE++ +K+QQ+ N NL N ++ L Q ++ IL N Q SP + + S QL Q GL L +TGL ++ VAA A LL+P+ + Q N + A +T P SN++ A A+ SAQ++N SD S Y + G +P FG A +P+ S + K +E GPE CNLFIYHLP EF D DL F PFG + SAKV++D+ T+ SKCFGFVS+ N AQ AI+AMNGFQ+G KRLKVQLK+PK DS KPY Sbjct: 147 DPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENR-NERKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNLASNINIPLGQTATSVT-TPILPNPPQQPSPVLGADAITPASIQLLQQLQAVGLQHQLLQALTGLGAQQSSSATDTSAVAA--AGLLTPM--TVQ---------------NLAAIAAMTQPSLSNAAAAAAAATS-------PGSAQLTNTAALLWSDPNPMASAYMSTAAG------------------LPQFGSASALSTSPLASVALSAAAAAAAGKQIE------GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKAMNGFQVGTKRLKVQLKKPK-DS-KPY 604 HSP 2 Score: 72.4034 bits (176), Expect = 8.101e-13 Identity = 43/131 (32.82%), Postives = 69/131 (52.67%), Query Frame = 2 Query: 698 KEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQ-NGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQ 1087 ++E + K+FVG + K+ E +R +F+ +G + VLRD+ G SKGC FV F ++ AL A ALH +T+ G I +K AD+E + + ++N N L ++ G I T+L +Q Sbjct: 143 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQ 273 HSP 3 Score: 70.0922 bits (170), Expect = 3.944e-12 Identity = 36/98 (36.73%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 440 SKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSS-EACQRALHDQKSLPGMARPLQVKPAKEERKTEERKL 730 S++ + KLFVG + + L E+D+R +FE +G I E ++LRD+ G KGCAF+T+ + ++ A + L K + G PL VK A +++ E++K+ Sbjct: 232 SENRNERKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQ-NGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKI 328
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Zebrafish
Match: celf4 (CUGBP, Elav-like family member 4 [Source:NCBI gene;Acc:436835]) HSP 1 Score: 431.795 bits (1109), Expect = 1.634e-143 Identity = 251/515 (48.74%), Postives = 322/515 (62.52%), Query Frame = 2 Query: 431 SVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYG-------QTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTA-ALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPV---TAIHSSAQISNLS---DSCVNVSLYQNACLGGQFVNTNSSATSD---SSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 ++ KD DAIKLF+GQIPR+L E DLRP+FEE+G+IYE ++L+D+ TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGMLNK Q E+DVRRLF+SFG IEECT+LR +GNSKGCAFVK+S+ EA AAISALHGSQTM GASSS+VVKFADT+KER R++QQ+ + + N +AL Q G YG Q L + +P+AA + Q + ++ G+ G + PT+G + + A T ++ SP+ S F TG N P+ AM TN H PV ++ L SC V Q +C S +D +Y + + AFPA GQ Q+ +++ GPE CNLFIYHLP EFGD +L+QMF PFG + S+KV+VDRATNQSKCFGFVS+ N AQAAIQ+MNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 38 TIPMKDHDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQTALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQCEDDVRRLFESFGSIEECTILRGPDGNSKGCAFVKYSTHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMAGQMGIFN-PMAL-QFGA--YGAYAQVQQQAALMASVGQGGYLSPMAAFA--AAQMQHMATINGLPGAPMTPTSGGSTPPGITAPTVTSIPSPI--SVNGF---TGLPPPQANGQAPAEAMFTN------------GIHPYPVLQEVVFREDSEKGGLGVAQRSCFGV---QGSCFLSSLSEAQSPTAADPLQQAYAGVQQYA-AFPAAYGQISQAFPQPPPIIPQQQRE----GPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPK-DANRPY 520
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Zebrafish
Match: celf5a (cugbp, Elav-like family member 5a [Source:ZFIN;Acc:ZDB-GENE-050208-746]) HSP 1 Score: 425.246 bits (1092), Expect = 8.494e-141 Identity = 242/505 (47.92%), Postives = 315/505 (62.38%), Query Frame = 2 Query: 443 KDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQ-----------LSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 KD DAIKLF+GQIPR+L+E DL+P+FE++G+I+E ++L+D+ TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGMLNK QTEEDV RLF+ +G IEECTVLR +GNSKGCAFVKFS+ EA +AISALHGSQTM GASSS+VVKFADT+KER R++QQ++ + N ++AL + Y ++ Q L+P VA + Q+ Q L ++ + + P +G+ + A L SP +I T A PS GF +SI H V A++++ + S Q A G Q AT+ + PIGQ SL P + +++ GPE CNLFIYHLP EFGD++L+QMF PFG + S+KV++DRATNQSKCFGFVS+ N A AQAAIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 73 KDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHAEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMVGQFGIFNPAIALPFSTYSTYAHALMQQQAALMAASHGGYLAP-----SVAFPTTQIHQMGAL-NINSLPPTPMTPVSGEFH-----QTLAGLSSP------PANITTSAV--------PSIVTPIVNGF--TSIPHQPNGHPA-VEAVYTNGLPPYSTQSPTAADTLQQAFTGVQQYTAIYPATTLT--------------PIGQ------SLPQPPQVIQQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK-DASRPY 528
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Zebrafish
Match: celf5a (cugbp, Elav-like family member 5a [Source:ZFIN;Acc:ZDB-GENE-050208-746]) HSP 1 Score: 414.461 bits (1064), Expect = 6.778e-137 Identity = 234/506 (46.25%), Postives = 308/506 (60.87%), Query Frame = 2 Query: 443 KDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQ-----------LSPPRIFNPVAALSFQLQQTSGLP--SLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKP 1921 KD DAIKLF+GQIPR+L+E DL+P+FE++G+I+E ++L+D+ TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + + RKLFVGMLNK QTEEDV RLF+ +G IEECTVLR +GNSKGCAFVKFS+ EA +AISALHGSQTM GASSS+VVKFADT+KER R++QQ++ + N ++AL + Y ++ Q L+P F + LP + ++GLS P N P ++++P++ G + PNG +P V A++++ + S Q A G Q AT+ + PIGQ SL P + +++ GPE CNLFIYHLP EFGD++L+QMF PFG + S+KV++DRATNQSKCFGFVS+ N A AQAAIQAMNGFQ+G+KRLKVQLKRPK D+ +P Sbjct: 61 KDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESRGD-RKLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHAEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMVGQFGIFNPAIALPFSTYSTYAHALMQQQAALMAASHGGYLAPSVAFPTTQIHQMGALNINSLPPTPMTPVSGLSSPPANITTSAVP------SIVTPIV---------NGFTSIPHQPNG-------HPA----------------VEAVYTNGLPPYSTQSPTAADTLQQAFTGVQQYTAIYPATTLT--------------PIGQ------SLPQPPQVIQQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK-DASRP 506
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Zebrafish
Match: celf3b (cugbp, Elav-like family member 3b [Source:ZFIN;Acc:ZDB-GENE-110408-50]) HSP 1 Score: 407.142 bits (1045), Expect = 4.832e-135 Identity = 238/504 (47.22%), Postives = 311/504 (61.71%), Query Frame = 2 Query: 443 KDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNL-------MNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALL--SPLLGSAQAFHINTGANYLTQNPNG-PSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 K+ DAIKLF+GQIPR+L+E DL+P+FE+YG+IYE ++++DK TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGML K Q++EDVR++F+ FG I+ECTVLR +G SKGCAFVKF S EA +AI++LHGS+T+ GASSS+VVKFADTEKER R++QQ+ + L + N+ A Q LSP A S Q+QQ + L + +GI I P +G ANT L +P+ Q +N G ++L NG P+ + TN + PV A+ Q A G Q ++Y + A+G+ P QF Q + Q+ L+++ GPE CN+FIYHLP EF D ++LQMF PFG + SAKV+VDRATNQSKCFGFVS+ N A AQ AIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 2 KEPDAIKLFIGQIPRNLEEKDLKPIFEQYGKIYELTVIKDKYTGMHKGCAFLTYCARESAVKAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSDEDVRKIFEPFGGIDECTVLRGPDGTSKGCAFVKFQSHSEAQSAINSLHGSRTLPGASSSLVVKFADTEKERGVRRMQQVTSQLGVYTPVTLNFNAYNAYTQALVQQQALVAQAQYLSP--------AASMQIQQMAAL-NASGIIATPITPPSG--------ANTPPTLAATPVSALPQPIAVN-GYSHLPPTTNGQPASEIYTN--------GLHPYQAQSPVAALDP----------------LQQAYAGMQHYT--------AAYPT--AYGLVSP----QFLQQ--PTLISQQQLQRE----GPEGCNVFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPK-DANRPY 442
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Zebrafish
Match: celf3a (cugbp, Elav-like family member 3a [Source:NCBI gene;Acc:57922]) HSP 1 Score: 396.741 bits (1018), Expect = 7.707e-131 Identity = 231/503 (45.92%), Postives = 311/503 (61.83%), Query Frame = 2 Query: 443 KDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQ--LSPPRIFNPVAALS-FQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATS--DSSYHSIPAFGIAFPAPIGQFGQ----SGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 K++DAIKLF+GQIPR+L+E DL+P+FE++G+IYE ++++DK TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + + RKLFVGML K ++ DVR++F+ FG IEECTVLR +G SKGCAFVK+ S EA AAISALHGS+T+ GASSS+VVKFADTEKER R++QQ+ + L ++ S ++L N Y Q ++ Q ++ +PVA ++ Q+QQ + ++NP++ + A A ++P G++ P+ A P IA+ N PV A + S +LY N G S A +Y + + +PA G GQ + + ++ GPE CN+FIYHLP EF D ++LQMF PFG + SAKV+VDRATNQSKCFGFVS+ N A AQAAIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 2 KEADAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNALHEQKTLPGMNRPIQVKPADSEGRGD-RKLFVGMLGKQLSDADVRKMFEPFGSIEECTVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEKERGIRRMQQVASQLGVI-SPMSLHLGAYNAYTQALVQQQALVAQSAYLSPVATVAAVQMQQLA-----------ALNPSS-------IIATPIASITPSSGTS----------------TPPTIAATPVPALP-PPIAV---NSYPPVPAAPNGQSASE--------ALYTN---GVHPYQAQSPALDPLQQAYTGMQHYTATYPAAYGLVGQPFPHQPTLVAQQPQQPQQLQQREGPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK-DANRPY 452
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Xenopus
Match: tada2a (transcriptional adaptor 2A [Source:Xenbase;Acc:XB-GENE-946815]) HSP 1 Score: 424.091 bits (1089), Expect = 9.914e-141 Identity = 248/523 (47.42%), Postives = 322/523 (61.57%), Query Frame = 2 Query: 401 NGPESNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQ-----------LSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAA--LLSPLLGSAQAFHINTGANYLTQNPNG-PSFAMITNPGFSNSSIAMASQNHNLPVTAIHSS-AQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 +GPE + + + KD DAIKLFVGQIPR+L+E DL+P+FE++G+IYE ++L+D+ TG+HKGCAFLTYC R S+ Q ALH+QK+LPGMARP+QVKPA E + +RKLFVGML+K Q+EE+V +F++FG IEEC+VLR +G+SKGCAFVKFSS EA AAI ALHGSQTM GASSS+VVKFADT+KER R++QQ++ L + SLAL + Y Q ++ Q LSP VA S +QQ + +L G+ I P +G + PV A L++PL G L P+ P+ I ++NS + +Q+ L V ++H S + S ++Y A L HS P P PI Q Q++ GPE CNLFIYHLP EFGD++L QMF PFG I S+KV++DRATNQSKCFGFVS+ N + AQ AIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 29 SGPEPPAQQSDSM-KDLDAIKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLSKQQSEEEVTSMFQAFGSIEECSVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLALPISPYSAYAQALMQQQTTVLSTSHGSYLSP-----SVAFPSCHIQQIGAV-NLNGLPAAPITPASG-LHSPPVIGTAAVPGLVAPL---------TNGFPGLVPFPSSHPALDTI----YTNSIVPYPAQSPALTVESLHPSFTGVQQYS------AIYPTAAL-------------TPVTHSTPQ-----PPPILQ-----------QRE--------GPEGCNLFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPK-DTTQPY 486
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Xenopus
Match: tada2a (transcriptional adaptor 2A [Source:Xenbase;Acc:XB-GENE-946815]) HSP 1 Score: 422.935 bits (1086), Expect = 4.038e-140 Identity = 246/526 (46.77%), Postives = 324/526 (61.60%), Query Frame = 2 Query: 401 NGPESNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQ-----------LSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQ-AYIDPVAANTAALLSPLLGSAQ----AFHINTGANYLTQNPNG-PSFAMITNPGFSNSSIAMASQNHNLPVTAIHSS-AQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 +GPE + + + KD DAIKLFVGQIPR+L+E DL+P+FE++G+IYE ++L+D+ TG+HKGCAFLTYC R S+ Q ALH+QK+LPGMARP+QVKPA E + +RKLFVGML+K Q+EE+V +F++FG IEEC+VLR +G+SKGCAFVKFSS EA AAI ALHGSQTM GASSS+VVKFADT+KER R++QQ++ L + SLAL + Y Q ++ Q LSP VA S +QQ + +L G+ I P +G+ + + A P++G+A + G L P+ P+ I ++NS + +Q+ L V ++H S + S ++Y A L HS P P PI Q Q++ GPE CNLFIYHLP EFGD++L QMF PFG I S+KV++DRATNQSKCFGFVS+ N + AQ AIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 29 SGPEPPAQQSDSM-KDLDAIKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLSKQQSEEEVTSMFQAFGSIEECSVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLALPISPYSAYAQALMQQQTTVLSTSHGSYLSP-----SVAFPSCHIQQIGAV-NLNGLPAAPITPASGEFLWGCEIRAKIGLHSPPVIGTAAVPGLVAPLTNGFPGLVPFPSSHPALDTI----YTNSIVPYPAQSPALTVESLHPSFTGVQQYS------AIYPTAAL-------------TPVTHSTPQ-----PPPILQ-----------QRE--------GPEGCNLFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPK-DTTQPY 499
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Xenopus
Match: tada2a (transcriptional adaptor 2A [Source:Xenbase;Acc:XB-GENE-946815]) HSP 1 Score: 374.785 bits (961), Expect = 1.105e-121 Identity = 234/531 (44.07%), Postives = 306/531 (57.63%), Query Frame = 2 Query: 401 NGPESNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERK--------TEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQ-----------LSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAA--LLSPLLGSAQAFHINTGANYLTQNPNG-PSFAMITNPGFSNSSIAMASQNHNLPVTAIHSS-AQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 +GPE + + + KD DAIKLFVGQIPR+L+E DL+P+FE++G+IYE ++L+D+ TG+HKGCAFLTYC R S+ Q ALH+QK+LPGMARP+QVKPA E + +RKLFVGML+K Q+EE+V +F++FG IEEC+VLR +G+SKGCAFVKFSS EA AAI ALHGSQTM GASSS+VVKFADT+KER R++QQ++ L + SLAL + Y Q ++ Q LSP VA S +QQ + +L G+ I P +G + PV A L++PL G L P+ P+ I ++NS + +Q+ L V ++H S + S ++Y A L HS P P PI Q Q++ GPE CNLFIYHLP EFGD++L QMF PFG I S+KV + N + AQ AIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 32 SGPEPPAQQSDSM-KDLDAIKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGMYPVHLPSDRKLFVGMLSKQQSEEEVTSMFQAFGSIEECSVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLALPISPYSAYAQALMQQQTTVLSTSHGSYLSP-----SVAFPSCHIQQIGAV-NLNGLPAAPITPASG-LHSPPVIGTAAVPGLVAPL---------TNGFPGLVPFPSSHPALDTI----YTNSIVPYPAQSPALTVESLHPSFTGVQQYS------AIYPTAAL-------------TPVTHSTPQ-----PPPILQ-----------QRE--------GPEGCNLFIYHLPQEFGDNELTQMFLPFGNIISSKV----------------FDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPK-DTTQPY 481
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Xenopus
Match: celf2 (CUGBP, Elav-like family member 2 [Source:NCBI gene;Acc:100125022]) HSP 1 Score: 322.398 bits (825), Expect = 2.999e-101 Identity = 206/517 (39.85%), Postives = 288/517 (55.71%), Query Frame = 2 Query: 446 DSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTG--IHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERK--TEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYI-------------DPVAANTAAL---LSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEK-DMGGS---GPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 D DAIK+FVGQIPRS E +L+ +FE YG +Y+ ++LRD+ KGC F+T+ R+++ Q ALH+ K+LPGM P+Q+KPA E+ E+RKLF+GM++K E D+R +F FG+IEEC +LR +G S+GCAFV FS++ A AI A+H SQTM+G SS IVVKFADT+K+++ R+LQQ + ++ GN+ G L Q A S L SG+ +AG+ L + A +P++ T+AL SP+ S N LT ++ T G + +++ + + + A+ + I+ + + N LG + ++ T D+ + I Q+ + L Q L++ GS GPE NLFIYHLP EFGD D+LQMF PFG + SAKV++D+ TN SKCFGFVSY N AQAAIQAMNGFQ+G+KRLKVQLKR K+DS KPY Sbjct: 31 DPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATW----GNLTGLGALTPQY---LALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATTTNANPLSTTTSALGALTSPVAASTANSSAGAAMNSLT--------SLGTLQGLAGATVGLNN------INALAGTVNIAQMLSGMAAL----NGGLGATGLTNGTAGTMDALTQAYSG--------IQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDS-KPY 513
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Xenopus
Match: celf2 (CUGBP, Elav-like family member 2 [Source:NCBI gene;Acc:100125022]) HSP 1 Score: 322.783 bits (826), Expect = 4.553e-101 Identity = 206/517 (39.85%), Postives = 288/517 (55.71%), Query Frame = 2 Query: 446 DSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGI--HKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERK--TEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYI-------------DPVAANTAAL---LSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEK-DMGGS---GPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 D DAIK+FVGQIPRS E +L+ +FE YG +Y+ ++LRD+ KGC F+T+ R+++ Q ALH+ K+LPGM P+Q+KPA E+ E+RKLF+GM++K E D+R +F FG+IEEC +LR +G S+GCAFV FS++ A AI A+H SQTM+G SS IVVKFADT+K+++ R+LQQ + ++ GN+ G L Q A S L SG+ +AG+ L + A +P++ T+AL SP+ S N LT ++ T G + +++ + + + A+ + I+ + + N LG + ++ T D+ + I Q+ + L Q L++ GS GPE NLFIYHLP EFGD D+LQMF PFG + SAKV++D+ TN SKCFGFVSY N AQAAIQAMNGFQ+G+KRLKVQLKR K+DS KPY Sbjct: 54 DPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATW----GNLTGLGALTPQY---LALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATTTNANPLSTTTSALGALTSPVAASTANSSAGAAMNSLT--------SLGTLQGLAGATVGLNN------INALAGTVNIAQMLSGMAAL----NGGLGATGLTNGTAGTMDALTQAYSG--------IQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDS-KPY 536
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Mouse
Match: Celf5 (CUGBP, Elav-like family member 5 [Source:MGI Symbol;Acc:MGI:2442333]) HSP 1 Score: 414.846 bits (1065), Expect = 6.742e-138 Identity = 246/512 (48.05%), Postives = 303/512 (59.18%), Query Frame = 2 Query: 443 KDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEE-RKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQ----------LSPPRIFNPVAALSFQLQQTSGLPS--LAGITGLSINPTNGQAYID----PVAANTAALLSPLLGSAQAFHINTGANYLTQNP-NGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 KD DAIKLFVGQIPR L E DL+P+FE++G+IYE ++L+D TG+HKGCAFLTYC R S+ Q ALH+QK+LPGMARP+QVKPA E R +RKLFVGMLNK Q+EEDV RLF+ FG I+ECTVLR +G+SKGCAFVKFSS EA AAI ALHGSQTM GASSS+VVKFADT+KER R++QQ++ L ++ SL L + Y Q ++ Q LSP F P +GLP+ +A +GL P G A + P+ +L P GS A AN L P P+ A +P FS Q + TA++ +A I+ ++ HS+P P L++ G PE CNLFIYHLP EFGD +L QMF PFG I S+KV++DRATNQSKCFGFVS+ + A AQAAIQAMNGFQ+G+KRLKVQLKRPK D PY Sbjct: 2 KDLDAIKLFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFPPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTAAVPGLMAPIPNGFPGVL-PFPGSHPALE-TVYANGLVPYPAQSPTVAETLHPAFSG------VQQY----TAMYPTAAIAPVA-------------------------------HSVPQ---------------------PPHLLQQQREG--PEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDHPASAQAAIQAMNGFQIGMKRLKVQLKRPK-DPGHPY 446
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Mouse
Match: Celf3 (CUGBP, Elav-like family member 3 [Source:MGI Symbol;Acc:MGI:1926034]) HSP 1 Score: 407.142 bits (1045), Expect = 2.950e-134 Identity = 234/510 (45.88%), Postives = 318/510 (62.35%), Query Frame = 2 Query: 443 KDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGG-NIYGQTILDNQ----LSPPRIFNPVAAL-SFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPG---FSNSSIAMASQNHNLPVTA-IHSS-AQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGG-----SGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 K+ DAIKLFVGQIPR L+E DL+P+FE++G+I+E ++++DK TG+HKGCAFLTYC R S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGML K QT+EDVR++F+ FG I+ECTVLR +G SKGCAFVKF + EA AAI+ LH S+T+ GASSS+VVKFADTEKER R++QQ+ L M S +AL Q G + Y Q ++ Q + +P+A + + Q+Q + + S G+ I P++G + +AA + + LG +N + TQ P+ + G + + +++ +P+ + HS +S V Q A G Q + +A ++Y + AFP P Q Q+ ++ GP+ CN+FIYHLP EF D ++LQMF PFG + SAKV+VDRATNQSKCFGFVS+ N A AQAAIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 2 KEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLG-MFSPIAL-QFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAI-SANGLIATPITPSSGTSTPPAIAATPVSAIPAALG------VNGYSPVPTQPTGQPAPDALYPNGVHPYPDEALSAERSAGGVPIMSQAHSWLVMLSAAQSPAAPVDPLQQAYAGMQ----HYTAAYPAAYSLV---APAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK-DANRPY 494
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Mouse
Match: Celf3 (CUGBP, Elav-like family member 3 [Source:MGI Symbol;Acc:MGI:1926034]) HSP 1 Score: 396.741 bits (1018), Expect = 1.477e-130 Identity = 230/505 (45.54%), Postives = 308/505 (60.99%), Query Frame = 2 Query: 443 KDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGG-NIYGQTILDNQLS----PPRIFNPVAALS-FQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGG-----SGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 K+ DAIKLFVGQIPR L+E DL+P+FE++G+I+E ++++DK TG+HKGCAFLTYC R S+ Q ALH+QK+LPGM RP+QVKPA E + + RKLFVGML K QT+EDVR++F+ FG I+ECTVLR +G SKGCAFVKF + EA AAI+ LH S+T+ GASSS+VVKFADTEKER R++QQ+ L M S +AL Q G + Y Q ++ Q + +P+A ++ Q+Q + + S G+ I P++G + +AA + + L G N + P P+ + + N +Q+ PV + Q A G Q + +A ++Y + AFP P Q Q+ ++ GP+ CN+FIYHLP EF D ++LQMF PFG + SAKV+VDRATNQSKCFGFVS+ N A AQAAIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 2 KEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGD-RKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLG-MFSPIAL-QFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAI-SANGLIATPITPSSGTSTPPAIAATPVSAIPAAL----------GVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPL-------------------QQAYAGMQ----HYTAAYPAAYSLV---APAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK-DANRPY 465
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Mouse
Match: Celf1 (CUGBP, Elav-like family member 1 [Source:MGI Symbol;Acc:MGI:1342295]) HSP 1 Score: 329.717 bits (844), Expect = 2.011e-104 Identity = 207/503 (41.15%), Postives = 296/503 (58.85%), Query Frame = 2 Query: 446 DSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGI--HKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERK--TEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGS------GPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 D DAIK+FVGQ+PR+ E DLR +FE+YG +YE +ILRD+ KGC F+T+ R+++ Q ALH+ K LPGM P+Q+KPA E+ E+RKLF+GM++K TE D+R +F SFG+IEEC +LR +G S+GCAFV F+++ A AI A+H +QTM+G SS +VVKFADT+K+++ ++ + L ++ A + GN+ G N L P + AL LQQT+ +L ++ S++P G A L + ++ A + +G N LT + + S ++S+ + S + + V I S + L+ + +++ A + SS S+ + ++ A A+ I Q+ + L Q L + G+ GPE NLFIYHLP EFGD DLLQMF PFG + SAKV++D+ TN SKCFGFVSY N AQAAIQ+MNGFQ+G+KRLKVQLKR K+DS KPY Sbjct: 12 DLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKR---MAQQLQQQMQQISAASVWGNLAGL----NTLGPQYL-----AL---LQQTASSGNLNTLS--SLHPMGGLN-----AMQLQNLAALAAAASAAQNTPSGTNALTTSSSPLSV-------LTSSAGSSPSSSSSNSVNPIASLGALQTLAGATAGLNVGSLAGMAALNGGLGSSGLSNGTGSTMEALTQAYSG-IQQYAAAALPTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDS-KPY 483
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Mouse
Match: Celf1 (CUGBP, Elav-like family member 1 [Source:MGI Symbol;Acc:MGI:1342295]) HSP 1 Score: 329.717 bits (844), Expect = 2.011e-104 Identity = 207/503 (41.15%), Postives = 296/503 (58.85%), Query Frame = 2 Query: 446 DSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGI--HKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERK--TEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGS------GPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 D DAIK+FVGQ+PR+ E DLR +FE+YG +YE +ILRD+ KGC F+T+ R+++ Q ALH+ K LPGM P+Q+KPA E+ E+RKLF+GM++K TE D+R +F SFG+IEEC +LR +G S+GCAFV F+++ A AI A+H +QTM+G SS +VVKFADT+K+++ ++ + L ++ A + GN+ G N L P + AL LQQT+ +L ++ S++P G A L + ++ A + +G N LT + + S ++S+ + S + + V I S + L+ + +++ A + SS S+ + ++ A A+ I Q+ + L Q L + G+ GPE NLFIYHLP EFGD DLLQMF PFG + SAKV++D+ TN SKCFGFVSY N AQAAIQ+MNGFQ+G+KRLKVQLKR K+DS KPY Sbjct: 12 DLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKR---MAQQLQQQMQQISAASVWGNLAGL----NTLGPQYL-----AL---LQQTASSGNLNTLS--SLHPMGGLN-----AMQLQNLAALAAAASAAQNTPSGTNALTTSSSPLSV-------LTSSAGSSPSSSSSNSVNPIASLGALQTLAGATAGLNVGSLAGMAALNGGLGSSGLSNGTGSTMEALTQAYSG-IQQYAAAALPTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDS-KPY 483
BLAST of CUGBP, Elav-like family member 4 vs. UniProt/SwissProt
Match: sp|Q6DGV1|CELF4_DANRE (CUGBP Elav-like family member 4 OS=Danio rerio OX=7955 GN=celf4 PE=2 SV=1) HSP 1 Score: 431.795 bits (1109), Expect = 1.234e-142 Identity = 251/515 (48.74%), Postives = 322/515 (62.52%), Query Frame = 2 Query: 431 SVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYG-------QTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTA-ALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPV---TAIHSSAQISNLS---DSCVNVSLYQNACLGGQFVNTNSSATSD---SSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 ++ KD DAIKLF+GQIPR+L E DLRP+FEE+G+IYE ++L+D+ TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGMLNK Q E+DVRRLF+SFG IEECT+LR +GNSKGCAFVK+S+ EA AAISALHGSQTM GASSS+VVKFADT+KER R++QQ+ + + N +AL Q G YG Q L + +P+AA + Q + ++ G+ G + PT+G + + A T ++ SP+ S F TG N P+ AM TN H PV ++ L SC V Q +C S +D +Y + + AFPA GQ Q+ +++ GPE CNLFIYHLP EFGD +L+QMF PFG + S+KV+VDRATNQSKCFGFVS+ N AQAAIQ+MNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 38 TIPMKDHDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQTALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQCEDDVRRLFESFGSIEECTILRGPDGNSKGCAFVKYSTHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMAGQMGIFN-PMAL-QFGA--YGAYAQVQQQAALMASVGQGGYLSPMAAFA--AAQMQHMATINGLPGAPMTPTSGGSTPPGITAPTVTSIPSPI--SVNGF---TGLPPPQANGQAPAEAMFTN------------GIHPYPVLQEVVFREDSEKGGLGVAQRSCFGV---QGSCFLSSLSEAQSPTAADPLQQAYAGVQQYA-AFPAAYGQISQAFPQPPPIIPQQQRE----GPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPK-DANRPY 520
BLAST of CUGBP, Elav-like family member 4 vs. UniProt/SwissProt
Match: sp|A0JM51|CELF5_XENTR (CUGBP Elav-like family member 5 OS=Xenopus tropicalis OX=8364 GN=celf5 PE=2 SV=1) HSP 1 Score: 424.091 bits (1089), Expect = 5.252e-140 Identity = 248/523 (47.42%), Postives = 322/523 (61.57%), Query Frame = 2 Query: 401 NGPESNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQ-----------LSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAA--LLSPLLGSAQAFHINTGANYLTQNPNG-PSFAMITNPGFSNSSIAMASQNHNLPVTAIHSS-AQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 +GPE + + + KD DAIKLFVGQIPR+L+E DL+P+FE++G+IYE ++L+D+ TG+HKGCAFLTYC R S+ Q ALH+QK+LPGMARP+QVKPA E + +RKLFVGML+K Q+EE+V +F++FG IEEC+VLR +G+SKGCAFVKFSS EA AAI ALHGSQTM GASSS+VVKFADT+KER R++QQ++ L + SLAL + Y Q ++ Q LSP VA S +QQ + +L G+ I P +G + PV A L++PL G L P+ P+ I ++NS + +Q+ L V ++H S + S ++Y A L HS P P PI Q Q++ GPE CNLFIYHLP EFGD++L QMF PFG I S+KV++DRATNQSKCFGFVS+ N + AQ AIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 29 SGPEPPAQQSDSM-KDLDAIKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLSKQQSEEEVTSMFQAFGSIEECSVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLALPISPYSAYAQALMQQQTTVLSTSHGSYLSP-----SVAFPSCHIQQIGAV-NLNGLPAAPITPASG-LHSPPVIGTAAVPGLVAPL---------TNGFPGLVPFPSSHPALDTI----YTNSIVPYPAQSPALTVESLHPSFTGVQQYS------AIYPTAAL-------------TPVTHSTPQ-----PPPILQ-----------QRE--------GPEGCNLFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPK-DTTQPY 486
BLAST of CUGBP, Elav-like family member 4 vs. UniProt/SwissProt
Match: sp|Q91579|CEL3A_XENLA (CUGBP Elav-like family member 3-A OS=Xenopus laevis OX=8355 GN=tnrc4-a PE=2 SV=2) HSP 1 Score: 409.838 bits (1052), Expect = 7.857e-135 Identity = 242/503 (48.11%), Postives = 310/503 (61.63%), Query Frame = 2 Query: 443 KDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQL--------SPPRIFNPVAAL-SFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 K+ DAIKLF+GQIPR+L E DL+P+FE++G+IYE ++++DK TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGML K QT+EDVRR+F+ FG I+ECTVLR +G SKGCAFVKF + EA AAI+ALHGS+T+ GASSS+VVKFADTEKER R++QQ+ N L M S +AL + Y Q + D + + NP+A + + Q+QQ + + + GI I I+P+ +++ P L + Q I T NG S A+ T SS A+ + N P A AQ+ L Q A G Q A A+G+ PA Q+ E GPE CN+FIYHLP EF D ++LQMF PFG + SAKV+VDRATNQSKCFGFVS+ N AQAAIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 2 KEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRMQQVANQLG-MFSPIALQFGAYSAYTQAVSDQLMQQQAALVAAHSAYLNPMATMAAVQMQQMATI-NPNGIIATPIT------QINPITSSSGTSTPPTLTATQVSAIPA-----TLGVNGYS-AVPTQSTVQPSSEAIYT-NGLHPYPAQSPVAQLDPL----------QQAYAGMQHYTAAYPA----------AYGLVSPAFTQPPAILQQQPPQQQQQRE------GPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAMNGFQIGMKRLKVQLKRPK-DANRPY 462
BLAST of CUGBP, Elav-like family member 4 vs. UniProt/SwissProt
Match: sp|Q7ZWM3|CEL3B_XENLA (CUGBP Elav-like family member 3-B OS=Xenopus laevis OX=8355 GN=tnrc4-b PE=2 SV=1) HSP 1 Score: 408.683 bits (1049), Expect = 2.305e-134 Identity = 236/503 (46.92%), Postives = 305/503 (60.64%), Query Frame = 2 Query: 443 KDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQL--------SPPRIFNPVAAL-SFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 K+ DAIKLF+GQIPR+L E DL+P+FE++G+IYE ++++DK TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGML K QT+EDVRR+F++FG I+ECTVLR +G SKGCAFVKF + EA AAI+ALHGS+T+ GASSS+VVKFADTEKER R++QQ+ N L M S +AL + Y Q + D + + NP+A + + Q+QQ + + + GI I N + +P+ +N + TQ+ PS I G P A AQ+ L Q A G Q A A+G+ PA F Q LT + ++ GPE CN+FIYHLP EF D ++LQMF PFG + SAKV+VDRATNQSKCFGFVS+ N AQAAIQ+MNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 2 KEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFETFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRMQQVANQLG-MFSPIALQFGAYSAYTQAVSDQLMQQQAALVAAQSAYLNPMATMAAVQMQQMATI-NPNGIIATPITQINSITSSSGTSTPPTLTATPVSAIPATLGVNGYSAVPTQSTVQPSSEAIYTNGLH-------------PYPAQSPVAQLDPL----------QQAYAGMQHYTAAYPA----------AYGLVSPA----FTQPPAILTQ--QPPQQQQQREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPK-DANRPY 462
BLAST of CUGBP, Elav-like family member 4 vs. UniProt/SwissProt
Match: sp|Q08E07|CELF3_BOVIN (CUGBP Elav-like family member 3 OS=Bos taurus OX=9913 GN=CELF3 PE=2 SV=1) HSP 1 Score: 402.905 bits (1034), Expect = 3.576e-132 Identity = 230/501 (45.91%), Postives = 305/501 (60.88%), Query Frame = 2 Query: 443 KDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGG-NIYGQTILDNQ----LSPPRIFNPVAAL-SFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGG-SGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 K+ DAIKLFVGQIPR L+E DL+P+FE++G+I+E ++++DK TG+HKGCAFLTYC R S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGML K QT+EDVR++F+ FG I+ECTVLR +G SKGCAFVKF + EA AAI+ LH S+T+ GASSS+VVKFADTEKER R++QQ+ L M S +AL Q G + Y Q ++ Q + +P+A + + Q+Q + + + G+ I P++G + +AA + + L G N + P P+ + + N +Q+ PV + Q A G Q +A S AFP P Q Q+ ++ GP+ CN+FIYHLP EF D ++LQMF PFG + SAKV+VDRATNQSKCFGFVS+ N A AQAAIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 2 KEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLG-MFSPIAL-QFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAI-NANGLIATPITPSSGTSTPPAIAATPVSAIPAAL----------GVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPL-------------------QQAYAGMQHYTAYPAAYS--------LVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK-DANRPY 461
BLAST of CUGBP, Elav-like family member 4 vs. TrEMBL
Match: R7TIA4 (Uncharacterized protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_183838 PE=4 SV=1) HSP 1 Score: 442.58 bits (1137), Expect = 3.829e-145 Identity = 249/495 (50.30%), Postives = 315/495 (63.64%), Query Frame = 2 Query: 443 KDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAM-ITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 KD+DAIKLFVGQIPR+L+E DLRP+FEE+GQIYE ++L+D+ TG+HKGCAFLTYC R S+ Q+ALH+QK+LPGM RP+QVKPA E + E+RKLFVGMLNK Q+EE+VR++F +G IEECT+LRDQNGNSKGCAFVKF++ +A AAI+ALHGSQTM GASSS+VVKFADTEKERQ RK+QQ+ PL L+ S AL+Q G + QQ + + + A SINPT ++A TA+ + L A ++T A T + P+F +T P + + AM + P+T + A + S + Q G S + + PA F + Q + + T QK+ GPE CNLFIYHLP EFGD +L QMF PFG + SAKVY+DRATNQSKCFGFVS+ N A AQAAIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 12 KDADAIKLFVGQIPRNLEEKDLRPIFEEFGQIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQQALHEQKTLPGMNRPIQVKPADSESRAEDRKLFVGMLNKQQSEEEVRQMFSPYGSIEECTILRDQNGNSKGCAFVKFTTHADAQAAINALHGSQTMPGASSSLVVKFADTEKERQLRKMQQMTGPLGLL-SPFALSQFG-----------------TYGAYTQQQLVQQQAALMAAAAAQGSYSINPT--------MSALTASQVPHAL--AMQNGLSTAAITPTSGASNPAFLQELTPPTMLSPTAAMTA----FPMTQANGQA---VMDPSGIQQYQAQAMAAGDPLTQAYSGVQQYAGIATYPAAYGQFQQALAQHAATIIPTTTAQKE--------GPEGCNLFIYHLPQEFGDAELAQMFMPFGNVISAKVYIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK-DANRPY 462
BLAST of CUGBP, Elav-like family member 4 vs. TrEMBL
Match: A0A1A8HH89 (CUGBP, Elav-like family member 4 OS=Nothobranchius korthausae OX=1143690 GN=CELF4 PE=4 SV=1) HSP 1 Score: 431.409 bits (1108), Expect = 5.565e-140 Identity = 251/519 (48.36%), Postives = 326/519 (62.81%), Query Frame = 2 Query: 419 GKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYG-------QTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTA-ALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPV---TAIHSSAQISNLS---DSCVNVSLYQNACLGGQFVNTNSSATSD---SSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 G ++ KD DAIKLF+GQIPR+L E DLRP+FEE+G+IYE ++L+D+ TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGMLNK Q+E+DVRRLF+SFG IEECT+LR +GNSKGCAFVK+SS EA AAISALHGSQTM GASSS+VVKFADT+KER R++QQ+ + + N +AL Q G YG Q L + +P+AA + Q + ++ G+ G + PT+G + ++A T ++ SP+ S F TG N P+ A+ TN H+ PV ++ + L SC V Q C S +D +Y + + A+PA GQ Q+ +++ GPE CNLFIYHLP EFGD +L+QMF PFG + S+KV+VDRATNQSKCFGFVS+ N AQAAIQ+MNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 36 GCPATIPMKDHDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGSIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMAGQMGIFN-PMAL-QFGA--YGAYAQVQQQAALMASVGQGGYLSPMAAFA--AAQMQHMATINGLPGAPLTPTSGGSTPPGISAPTVTSIPSPI--SVNGF---TGIPPPQANGQPPAEAVFTN------------GIHHYPVLQEVVFREDSEKNGLGVAPRSCFGV---QGGCFLSSLSEAQSPTAADPLQQAYTGVQQYA-AYPAAYGQISQAFPHPPPIIPQQQRE----GPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPK-DANRPY 522
BLAST of CUGBP, Elav-like family member 4 vs. TrEMBL
Match: I3KTQ3 (CUGBP, Elav-like family member 4 OS=Oreochromis niloticus OX=8128 GN=celf4 PE=4 SV=1) HSP 1 Score: 431.795 bits (1109), Expect = 5.687e-140 Identity = 251/519 (48.36%), Postives = 326/519 (62.81%), Query Frame = 2 Query: 419 GKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYG-------QTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTA-ALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPV---TAIHSSAQISNLS---DSCVNVSLYQNACLGGQFVNTNSSATSD---SSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 G ++ KD DAIKLF+GQIPR+L E DLRP+FEE+G+IYE ++L+D+ TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGMLNK Q+E+DVRRLF+SFG IEECT+LR +GNSKGCAFVK+SS EA AAISALHGSQTM GASSS+VVKFADT+KER R++QQ+ + + N +AL Q G YG Q L + +P+AA + Q + ++ G+ G + PT+G + ++A T ++ SP+ S F TG N P+ A+ TN H+ PV ++ + L SC V Q C S +D +Y + + A+PA GQ Q+ +++ GPE CNLFIYHLP EFGD +L+QMF PFG + S+KV+VDRATNQSKCFGFVS+ N AQAAIQ+MNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 38 GCPATIPMKDHDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGSIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMAGQMGIFN-PMAL-QFGA--YGAYAQVQQQAALMASVGQGGYLSPMAAFA--AAQMQHMATINGLPGAPLTPTSGGSTPPGISAPTVTSIPSPI--SVNGF---TGMPPPQANGQPPAEAVFTN------------GIHHYPVLQEVVFREDSEKNGLGVAPRSCFGV---QGGCFLSSLSEAQSPTAADPLQQAYTGVQQYA-AYPAAYGQISQAFPHPPPIIPQQQRE----GPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPK-DANRPY 524
BLAST of CUGBP, Elav-like family member 4 vs. TrEMBL
Match: A0A1A8V734 (CUGBP, Elav-like family member 4 OS=Nothobranchius furzeri OX=105023 GN=CELF4 PE=4 SV=1) HSP 1 Score: 431.409 bits (1108), Expect = 5.810e-140 Identity = 251/519 (48.36%), Postives = 326/519 (62.81%), Query Frame = 2 Query: 419 GKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYG-------QTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTA-ALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPV---TAIHSSAQISNLS---DSCVNVSLYQNACLGGQFVNTNSSATSD---SSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 G ++ KD DAIKLF+GQIPR+L E DLRP+FEE+G+IYE ++L+D+ TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGMLNK Q+E+DVRRLF+SFG IEECT+LR +GNSKGCAFVK+SS EA AAISALHGSQTM GASSS+VVKFADT+KER R++QQ+ + + N +AL Q G YG Q L + +P+AA + Q + ++ G+ G + PT+G + ++A T ++ SP+ S F TG N P+ A+ TN H+ PV ++ + L SC V Q C S +D +Y + + A+PA GQ Q+ +++ GPE CNLFIYHLP EFGD +L+QMF PFG + S+KV+VDRATNQSKCFGFVS+ N AQAAIQ+MNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 36 GCPATIPMKDHDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGSIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMAGQMGIFN-PMAL-QFGA--YGAYAQVQQQAALMASVGQGGYLSPMAAFA--AAQMQHMATINGLPGAPLTPTSGGSTPPGISAPTVTSIPSPI--SVNGF---TGIPPPQANGQPPAEAVFTN------------GIHHYPVLQEVVFREDSEKNGLGVAPRSCFGV---QGGCFLSSLSEAQSPTAADPLQQAYTGVQQYA-AYPAAYGQISQAFPHPPPIIPQQQRE----GPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPK-DANRPY 522
BLAST of CUGBP, Elav-like family member 4 vs. TrEMBL
Match: A0A1A8M1X6 (CUGBP, Elav-like family member 4 OS=Nothobranchius pienaari OX=704102 GN=CELF4 PE=4 SV=1) HSP 1 Score: 431.409 bits (1108), Expect = 5.810e-140 Identity = 251/519 (48.36%), Postives = 326/519 (62.81%), Query Frame = 2 Query: 419 GKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYG-------QTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTA-ALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPV---TAIHSSAQISNLS---DSCVNVSLYQNACLGGQFVNTNSSATSD---SSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 G ++ KD DAIKLF+GQIPR+L E DLRP+FEE+G+IYE ++L+D+ TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGMLNK Q+E+DVRRLF+SFG IEECT+LR +GNSKGCAFVK+SS EA AAISALHGSQTM GASSS+VVKFADT+KER R++QQ+ + + N +AL Q G YG Q L + +P+AA + Q + ++ G+ G + PT+G + ++A T ++ SP+ S F TG N P+ A+ TN H+ PV ++ + L SC V Q C S +D +Y + + A+PA GQ Q+ +++ GPE CNLFIYHLP EFGD +L+QMF PFG + S+KV+VDRATNQSKCFGFVS+ N AQAAIQ+MNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 36 GCPATIPMKDHDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGSIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMAGQMGIFN-PMAL-QFGA--YGAYAQVQQQAALMASVGQGGYLSPMAAFA--AAQMQHMATINGLPGAPLTPTSGGSTPPGISAPTVTSIPSPI--SVNGF---TGIPPPQANGQPPAEAVFTN------------GIHHYPVLQEVVFREDSEKNGLGVAPRSCFGV---QGGCFLSSLSEAQSPTAADPLQQAYTGVQQYA-AYPAAYGQISQAFPHPPPIIPQQQRE----GPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPK-DANRPY 522
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Cavefish
Match: celf4 (CUGBP Elav-like family member 4 [Source:NCBI gene;Acc:103032019]) HSP 1 Score: 421.394 bits (1082), Expect = 1.390e-139 Identity = 251/515 (48.74%), Postives = 322/515 (62.52%), Query Frame = 2 Query: 431 SVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYG-------QTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTA-ALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPV---TAIHSSAQISNLS---DSCVNVSLYQNACLGGQFVNTNSSATSD---SSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 ++ KD DAIKLFVGQIPR+L E DLRP+FEE+G+IYE ++L+D+ TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGMLNK Q E+DVRRLF+SFG IEECT+LR +GNSKGCAFVK+SS EA AAISALHGSQTM GASSS+VVKFADT+KER R++QQ+ + + N +AL Q G YG Q L + +P+AA + Q + ++ G+ G + PT+G + + A T ++ SP+ S F TG N P+ A+ TN H PV ++ L SC V Q +C S +D +Y + + A+PA GQ Q+ +++ GPE CNLFIYHLP EFGD +L+QMF PFG + S+KV+VDRATNQSKCFGFVS+ N AQAAIQ+MNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 30 TIPMKDHDAIKLFVGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQTALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQCEDDVRRLFESFGSIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMAGQMGIFN-PMAL-QFGA--YGAYAQVQQQAALMASVGQGGYLSPMAAFA--AAQMQHMATINGLPGAPMTPTSGGSTPPGITAPTVTSIPSPI--SVNGF---TGLPPPQANGQPPAEAVFTN------------GIHPYPVLQEVVFREDSEKGGLGVAQRSCFGV---QGSCFLSSLSEAQSPTAADPLQQAYAGVQQYAAAYPAAYGQISQAFPQPPPIIPQQQRE----GPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPK-DANRPY 513
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Cavefish
Match: ENSAMXT00000012369.2 (CUGBP Elav-like family member 5 [Source:NCBI gene;Acc:103039850]) HSP 1 Score: 418.313 bits (1074), Expect = 1.006e-137 Identity = 230/516 (44.57%), Postives = 309/516 (59.88%), Query Frame = 2 Query: 443 KDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLAL--------------------AQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLP--SLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 KD DAIKLF+GQIPR+L+E DL+P+FE++G+I+E ++L+D+ TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGMLNK QTEEDV R+F+ +G IEECTVLR +GNSKGCAFVKFS+ EA +AI LHGSQTM GASSS+VVKFADT+KER R++QQ++ + N ++AL A + +G + + P + V AL+ +GLP + ++GLS P N +A++ ++++P++ N +A Q + PV A++++ + S Q A G Q T+ + PIGQ L ++ GPE CNLFIYHLP EFGD++L+QMF PFG++ S+KV++DRATNQSKCFGFVS+ N A A AAIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 105 KDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRIFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAIGGLHGSQTMPGASSSLVVKFADTDKERTIRRMQQMVGQFGIFNPAVALPFSTYSSTYSTYTHALMQQQAAIMAASHGAYLAPSMAFPATQIHQVGALNM-----NGLPPTPMTPVSGLSSPPAN-------LASSVPSIVTPIV---------------------------------NGFTGIAPQPNGHPVEAVYANGLPPYSTQSPTAADTLQQAFTGVQQYTAIYPTTTLT--------------PIGQ----TLPQPPQVIQQQQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGSVISSKVFMDRATNQSKCFGFVSFDNPASAHAAIQAMNGFQIGMKRLKVQLKRPK-DASRPY 556
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Cavefish
Match: celf4 (CUGBP Elav-like family member 4 [Source:NCBI gene;Acc:103032019]) HSP 1 Score: 367.466 bits (942), Expect = 4.546e-119 Identity = 223/479 (46.56%), Postives = 289/479 (60.33%), Query Frame = 2 Query: 431 SVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYG-------QTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTA-ALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITN-----PGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSD---SSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNV 1819 ++ KD DAIKLFVGQIPR+L E DLRP+FEE+G+IYE ++L+D+ TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGMLNK Q E+DVRRLF+SFG IEECT+LR +GNSKGCAFVK+SS EA AAISALHGSQTM GASSS+VVKFADT+KER R++QQ+ + + N +AL Q G YG Q L + +P+AA + Q + ++ G+ G + PT+G + + A T ++ SP+ S F TG N P+ A+ TN P S+ L V SC V Q +C S +D +Y + + A+PA GQ Q+ +++ GPE CNLFIYHLP EFGD +L+QMF PFG + S+KV+VDRATNQSKCFGFV ++ Sbjct: 30 TIPMKDHDAIKLFVGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQTALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQCEDDVRRLFESFGSIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMAGQMGIFN-PMAL-QFGA--YGAYAQVQQQAALMASVGQGGYLSPMAAFA--AAQMQHMATINGLPGAPMTPTSGGSTPPGITAPTVTSIPSPI--SVNGF---TGLPPPQANGQPPAEAVFTNGIHPYPVLQEVVFREDSEKGGLGVA-----------QRSCFGV---QGSCFLSSLSEAQSPTAADPLQQAYAGVQQYAAAYPAAYGQISQAFPQPPPIIPQQQRE----GPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVELEHM 479
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Cavefish
Match: celf4 (CUGBP Elav-like family member 4 [Source:NCBI gene;Acc:103032019]) HSP 1 Score: 293.893 bits (751), Expect = 1.415e-91 Identity = 134/198 (67.68%), Postives = 164/198 (82.83%), Query Frame = 2 Query: 431 SVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMN 1024 ++ KD DAIKLFVGQIPR+L E DLRP+FEE+G+IYE ++L+D+ TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + + RKLFVGMLNK Q E+DVRRLF+SFG IEECT+LR +GNSKGCAFVK+SS EA AAISALHGSQTM GASSS+VVKFADT+KER R++QQ+ + + N Sbjct: 34 TIPMKDHDAIKLFVGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQTALHEQKTLPGMNRPIQVKPADSESRGD-RKLFVGMLNKQQCEDDVRRLFESFGSIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMAGQMGIFN 230 HSP 2 Score: 65.4698 bits (158), Expect = 9.609e-11 Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 2 Query: 1796 GFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 GFVS+ N AQAAIQ+MNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 390 GFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPK-DANRPY 431
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Cavefish
Match: celf3b (cugbp, Elav-like family member 3b [Source:ZFIN;Acc:ZDB-GENE-110408-50]) HSP 1 Score: 289.271 bits (739), Expect = 1.501e-90 Identity = 185/426 (43.43%), Postives = 242/426 (56.81%), Query Frame = 2 Query: 668 MARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQ---LSPPRIFNPVAAL-SFQLQQTSGLPSLAGITG---LSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 M RP+QVKPA E + E+RKLFVGML K Q ++DVR++F+ FG I+ECT+LR +G SKGCAFVKF S EA AAI++LHGS+T+ GASSS+VVKFADTEKER R++QQ+ + L++ S + L N Y Q ++ Q ++ +P+A + + Q+QQ + L + GI I P++G +AA L P + + T AN G S S + H P A + A + L Q A G Q H A+ A+ F Q VPQ+ +++ GPE CN+FIYHLP EF D +LLQMF PFG + SAKV+VDRATNQSKCFGFVS+ N AQ AIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 1 MNRPIQVKPADSEGRGEDRKLFVGMLGKQQEDDDVRKMFELFGRIDECTILRAPDGTSKGCAFVKFQSHAEAQAAINSLHGSRTLPGASSSLVVKFADTEKERGLRRMQQVASQLSVF-SPMTLNLGAYNAYAQALVQQQQTLVAQSAYLSPIATVATVQMQQMAAL-NANGIIATPITPITPSSGTNTPPSIAATPVPALPPPIALNGYSPVPTAAN-----------------GQSASETIYTNGIH--PFQAQSAVAVLDPL----------QQAYTGMQ--------------HYTAAYPAAYGLVSSPFPQQ--PTLVPQQQQQRE----GPEGCNIFIYHLPQEFTDSELLQMFVPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPK-DANRPY 374 HSP 2 Score: 65.4698 bits (158), Expect = 7.764e-11 Identity = 34/90 (37.78%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 461 KLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKL 730 KLFVG + + ++ D+R MFE +G+I E +ILR G KGCAF+ + ++A +LH ++LPG + L VK A E++ R++ Sbjct: 20 KLFVGMLGKQQEDDDVRKMFELFGRIDECTILRAP-DGTSKGCAFVKFQSHAEAQAAINSLHGSRTLPGASSSLVVKFADTEKERGLRRM 108
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002852.1 (pep scaffold:Pmarinus_7.0:GL477021:232626:260651:-1 gene:ENSPMAG00000002591.1 transcript:ENSPMAT00000002852.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 182.956 bits (463), Expect = 7.207e-53 Identity = 86/188 (45.74%), Postives = 133/188 (70.74%), Query Frame = 2 Query: 446 DSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGI--HKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKT--EERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQ 997 D DAIK+FVGQIPRS E +LR +FE++G +YE +I+RD+ +GC F+T+ R+++ Q ALH+ K+LPG+ P ++ P+ + EERKLF+GM++K +E D+R +F FG++EEC VLR +G SKGCAF+ ++++ A AI +H SQTM+G ++ + VKFADT+K+++ ++LQQ Sbjct: 48 DLDAIKMFVGQIPRSWSEKELRDLFEQFGPVYEINIVRDRTQKPPQSRGCCFVTFYTRKAALEAQNALHNIKTLPGLHAPTELVPSTTSSSSSLEERKLFIGMISKKCSENDIRAMFSPFGQMEECRVLRGPDGQSKGCAFITYTARAMAQNAIKGMHQSQTMEGCAAPL-VKFADTQKDKEQKRLQQ 234
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007375.1 (pep scaffold:Pmarinus_7.0:GL478911:2009:38506:1 gene:ENSPMAG00000006638.1 transcript:ENSPMAT00000007375.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 186.808 bits (473), Expect = 1.590e-52 Identity = 90/191 (47.12%), Postives = 131/191 (68.59%), Query Frame = 2 Query: 446 DSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVT--GIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKT--EERKLFVGMLNKNQTEEDVRRLFKSF------GEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRK 988 D DAIK+FVGQIPRS ES+LR +FE++G ++E ++LRD+ + +GC F+TYC R+++ Q +LH+ K+LPGM P+Q+KPA E+ + EERKLF+GML+K +E DVR +F F G TVL K C F+ F++++ A AI ++H SQTM+G SS++VVKFADT+K+++ RK Sbjct: 13 DPDAIKMFVGQIPRSWGESELRELFEQFGAVHEVNVLRDRTQTPAVSRGCCFVTYCTRKAALEAQSSLHNIKTLPGMYHPIQMKPADSEKSSGMEERKLFIGMLSKQLSEADVRVIFSPFVGENPLGGAPLDTVL-------KWCGFITFATRMMAQNAIKSMHHSQTMEGCSSAVVVKFADTQKDKEQRK 196
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008846.1 (pep scaffold:Pmarinus_7.0:GL480623:147895:156346:1 gene:ENSPMAG00000008007.1 transcript:ENSPMAT00000008846.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 139.813 bits (351), Expect = 1.147e-39 Identity = 67/91 (73.63%), Postives = 75/91 (82.42%), Query Frame = 2 Query: 1652 GPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 GPE NLFIYHLP EFGD DL+Q F PFG++ S+KV+VD+ TN SKCFGFVSY N AQAAIQAMNGFQ+G KRLKVQLKR K+DS KPY Sbjct: 1 GPEGANLFIYHLPQEFGDQDLMQTFMPFGSVVSSKVFVDKQTNLSKCFGFVSYDNPISAQAAIQAMNGFQIGTKRLKVQLKRSKNDS-KPY 90
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Sea Lamprey
Match: rbm45 (RNA binding motif protein 45 [Source:ZFIN;Acc:ZDB-GENE-070122-4]) HSP 1 Score: 86.6557 bits (213), Expect = 4.093e-18 Identity = 53/155 (34.19%), Postives = 89/155 (57.42%), Query Frame = 2 Query: 461 KLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLP--GMARPL-----QVKPAKEERKTEERKL--FVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQN-GNSKGCAFVKFSSQVEALAAI 895 +LF+ + ++ E+D+R F +G++ + I++DK T HKG AF+ Y ++SEAC RA+ + P G +P+ Q + + R E+ L M+ K TEED+R F+ +G+IE C++L+D+N +SKG +V+F +A AI Sbjct: 19 RLFL-VVSKTTSEADIREKFSRFGELQDLWIVKDKHTKEHKGIAFIKYA--RASEAC-RAMEEMNGQPLSGDGKPIKAMVAQSRASNNHRDLEDEDLTRIFLMIPKTYTEEDLRENFQEYGDIEYCSILKDKNTKDSKGFGYVRFLKPSQAALAI 169 HSP 2 Score: 47.3654 bits (111), Expect = 9.285e-6 Identity = 26/91 (28.57%), Postives = 50/91 (54.95%), Query Frame = 2 Query: 725 KLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNS-KGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQ 994 +LF+ +++K +E D+R F FGE+++ +++D++ KG AF+K++ EA A+ ++G Q + G I A + R L+ Sbjct: 19 RLFL-VVSKTTSEADIREKFSRFGELQDLWIVKDKHTKEHKGIAFIKYARASEACRAMEEMNG-QPLSGDGKPIKAMVAQSRASNNHRDLE 107
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Sea Lamprey
Match: RBMS2 (RNA binding motif single stranded interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:9909]) HSP 1 Score: 69.3218 bits (168), Expect = 1.240e-12 Identity = 50/190 (26.32%), Postives = 90/190 (47.37%), Query Frame = 2 Query: 434 VLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGS-----QTMQGASSSIVVKFAD-TEKERQTR 985 +L+ L++ +P + DL + + YG+I + DK T KG F+ H S A Q+A+ K A +Q + AK++ + + L++ L + E+++ + K FG++ +LRD NG S+G F + S + A I +G + S ++ KFAD +K+RQ++ Sbjct: 50 ILADHLSKTNLYIRGLPPGTTDQDLTKLCQPYGKIVSTKAILDKNTNQCKGYGFV---HFDSPAAAQKAVTALK-----ANGVQAQMAKQQEQ-DPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDANGTSRGVGFARMESTEKCEAVIQHFNGKFIQIPPGVPAPSEPLLCKFADGGQKKRQSQ 230 HSP 2 Score: 60.4622 bits (145), Expect = 6.499e-10 Identity = 31/76 (40.79%), Postives = 45/76 (59.21%), Query Frame = 2 Query: 1667 NLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAM--NGFQLGLKRLKVQ 1888 NL+I LPP D DL ++ P+G I S K +D+ TNQ K +GFV + + A AQ A+ A+ NG Q + + + Q Sbjct: 59 NLYIRGLPPGTTDQDLTKLCQPYGKIVSTKAILDKNTNQCKGYGFVHFDSPAAAQKAVTALKANGVQAQMAKQQEQ 134
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Yeast
Match: HRP1 (Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability [Source:SGD;Acc:S000005483]) HSP 1 Score: 66.2402 bits (160), Expect = 1.016e-11 Identity = 44/153 (28.76%), Postives = 77/153 (50.33%), Query Frame = 2 Query: 422 KSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALH--DQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQN-GNSKGCAFVKFSS 871 +S + LSK+S K+F+G + E +LR F +YG + + I++D TG +G FL++ S + + H D K + P + P E+ KT K+FVG + + ++ F +G I + ++ D++ G S+G FV + S Sbjct: 149 RSKADLSKES--CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVI----DPKRAIPRDEQDKT--GKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDS 293
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Yeast
Match: PAB1 (Poly(A) binding protein; part of the 3'-end RNA-processing complex, mediates interactions between the 5' cap structure and the 3' mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G; stimulates, but is not required for the deadenylation activity of the Pan2p-Pan3p poly(A)-ribonuclease complex [Source:SGD;Acc:S000000967]) HSP 1 Score: 60.077 bits (144), Expect = 8.382e-10 Identity = 41/152 (26.97%), Postives = 71/152 (46.71%), Query Frame = 2 Query: 464 LFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEE---RKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHG 910 L+VG + S+ E+ L +F G + + RD +T G A++ + EA ++A+ P R ++ ++ + RK +F+ L+ + + + F FG+I + D+NG SKG FV F + A AI AL+G Sbjct: 40 LYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNF---NDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNG 188 HSP 2 Score: 52.7582 bits (125), Expect = 1.675e-7 Identity = 37/100 (37.00%), Postives = 51/100 (51.00%), Query Frame = 2 Query: 1619 QKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKV--QLKRPKSDS 1912 Q+D GSG N+FI +L P+ + L FS FG I S+K+ D +SK FGFV + A+ AI A+NG L + + V L R + DS Sbjct: 115 QRDPSLRKKGSG----NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDS 209 HSP 3 Score: 51.9878 bits (123), Expect = 2.488e-7 Identity = 53/195 (27.18%), Postives = 85/195 (43.59%), Query Frame = 2 Query: 464 LFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHD-----QKSLPGMA-----RPLQVKPAKEERKTEER------KLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQL 1000 L+V I + + +F ++G I S+ +D G KG F+ Y + + AL+D +K G A R +K E + E+ LFV L+ + +E + F +G I V+R +NG SKG FV FS+ EA AI+ Q + G + V A + R+++ QQ+ Sbjct: 221 LYVKNINSETTDEQFQELFAKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITE-KNQQIVAG--KPLYVAIAQRKDVRRSQLAQQI 411 HSP 4 Score: 51.2174 bits (121), Expect = 4.950e-7 Identity = 45/163 (27.61%), Postives = 76/163 (46.63%), Query Frame = 2 Query: 464 LFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGM---ARPLQVKP--AKEERKT--EERK-----LFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQ 916 +F+ + + L F +G I I D+ G KG F+ H + A + A+ +L GM + + V P +++ER + EE K L+V +N T+E + LF FG I ++ +D +G KG FV + +A+ A+ AL+ S+ Sbjct: 128 IFIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFV---HFEEEGAAKEAID---ALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSE 283
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Yeast
Match: NSR1 (Nucleolar protein that binds nuclear localization sequences; required for pre-rRNA processing and ribosome biogenesis; binds to single stranded telomeric DNA and mRNA; methylated by Hmt1p; interaction with Top1p and nucleolar localization are negatively regulated by polyphosphorylation [Source:SGD;Acc:S000003391]) HSP 1 Score: 50.8322 bits (120), Expect = 4.752e-7 Identity = 21/69 (30.43%), Postives = 38/69 (55.07%), Query Frame = 2 Query: 1658 EDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQL 1864 E +F+ L D L + F G + A+V +R T++S+ +G+V + N ++A+ AIQ M G ++ Sbjct: 166 EPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEI 234
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Yeast
Match: NGR1 (RNA binding protein that negatively regulates growth rate; interacts with the 3' UTR of the mitochondrial porin (POR1) mRNA and enhances its degradation; overexpression impairs mitochondrial function; interacts with Dhh1p to mediate POR1 mRNA decay; expressed in stationary phase [Source:SGD;Acc:S000000416]) HSP 1 Score: 48.9062 bits (115), Expect = 2.336e-6 Identity = 31/116 (26.72%), Postives = 53/116 (45.69%), Query Frame = 2 Query: 1571 APIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIK 1918 AP + G+S L + + P + +F+ L P+ + L +F PFG I + ++ N C GFV + A+A+IQ + GF +G +++ RP S + K Sbjct: 329 APPMHLNEGGISNMRVNDSLPSNTYNTDPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRI-----PNGKNC-GFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGRPSSSNAK 438
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Yeast
Match: SNP1 (Component of U1 snRNP required for mRNA splicing via spliceosome; substrate of the arginine methyltransferase Hmt1p; may interact with poly(A) polymerase to regulate polyadenylation; homolog of human U1 70K protein; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000001323]) HSP 1 Score: 47.7506 bits (112), Expect = 2.824e-6 Identity = 26/84 (30.95%), Postives = 49/84 (58.33%), Query Frame = 2 Query: 443 KDSDAIK-LFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVK 691 KD+D + +F+G++P L E +L+ F ++G+I + I++DK+T KG AF+ + SS+ + + G+ R +Q+K Sbjct: 101 KDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEI-------GVHRGIQIK 177
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Nematostella
Match: EDO30576 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T0E1]) HSP 1 Score: 256.914 bits (655), Expect = 9.377e-78 Identity = 114/196 (58.16%), Postives = 156/196 (79.59%), Query Frame = 2 Query: 413 SNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQL 1000 +NG +TSV +DS+++KLFVGQ+PR+ +E DLRP+FE YGQIYE +IL+DK TG HKGCAFLT+C R + A Q+ LH++K+LPGM P+QVKPA E K+++RKLFVGM++K+ EED+R +F FG IEE TVLR+ + SKGCAF+KF+++++A AI+ +H S TM+G SS +VVKFADTEKE+ +K+Q L Sbjct: 7 TNGGTTSV--RDSNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHKGCAFLTFCSRDACNAAQKHLHEKKTLPGMHHPIQVKPADSETKSDDRKLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRNADSTSKGCAFIKFANRMQAQNAIATMHNSTTMEGCSSPLVVKFADTEKEKLQKKMQHL 200 HSP 2 Score: 141.354 bits (355), Expect = 5.647e-36 Identity = 73/135 (54.07%), Postives = 87/135 (64.44%), Query Frame = 2 Query: 1520 TSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 T +Y I + AFP + Q+ T Q E+ GP+ NLFIYHLP EF D DL+Q F PFG + SAKV++D+ TN SKCFGFVSY NV AQ AIQ MNGFQ+G KRLKVQLKRPK D+ +PY Sbjct: 325 TISQAYSGIQPYSAAFPT---VYNQALYQQTARQPQKEESHYTPGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQLKRPK-DANRPY 455
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Nematostella
Match: EDO35559 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SL64]) HSP 1 Score: 172.555 bits (436), Expect = 1.888e-47 Identity = 83/171 (48.54%), Postives = 118/171 (69.01%), Query Frame = 2 Query: 413 SNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQ 925 +NG +TSV +DS+++KLFVGQ+PR+ +E DLRP+FE YGQIYE +IL+DK TG HKG + A Q+ LH++K+LPGM ++RKLFVGM++K+ EED+R +F FG IEE TVLR+ + SKGCAF+KF+++++A AI+ +H S TM+ Sbjct: 7 TNGGTTSV--RDSNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHKGW--------DACNAAQKHLHEKKTLPGM---------------DDRKLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRNADSTSKGCAFIKFANRMQAQNAIATMHNSTTME 152 HSP 2 Score: 140.198 bits (352), Expect = 3.485e-36 Identity = 75/140 (53.57%), Postives = 89/140 (63.57%), Query Frame = 2 Query: 1511 SSATSDSSYHSIPAFGIAFPAPIGQ--FGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 S T +Y I + AFP Q + Q+ PQK+ GP+ NLFIYHLP EF D DL+Q F PFG + SAKV++D+ TN SKCFGFVSY NV AQ AIQ MNGFQ+G KRLKVQLKRPK D+ +PY Sbjct: 256 SMDTISQAYSGIQPYSAAFPTVYNQALYQQTARQ---PQKE--------GPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQLKRPK-DANRPY 383
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Nematostella
Match: EDO29519 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T3E7]) HSP 1 Score: 137.887 bits (346), Expect = 8.588e-38 Identity = 75/140 (53.57%), Postives = 89/140 (63.57%), Query Frame = 2 Query: 1511 SSATSDSSYHSIPAFGIAFPAPIGQ--FGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 S T +Y I + AFP Q + Q+ PQK+ GP+ NLFIYHLP EF D DL+Q F PFG + SAKV++D+ TN SKCFGFVSY NV AQ AIQ MNGFQ+G KRLKVQLKRPK D+ +PY Sbjct: 32 SMDTISQAYSGIQPYSAAFPTVYNQALYQQTARQ---PQKE--------GPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQLKRPK-DANRPY 159
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Nematostella
Match: EDO35562 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SL69]) HSP 1 Score: 84.7297 bits (208), Expect = 2.855e-20 Identity = 37/68 (54.41%), Postives = 53/68 (77.94%), Query Frame = 2 Query: 719 ERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTM 922 +RKLFVGM++K+ EED+R +F FG IEE TVLR+ + SKGCAF+KF+++++A AI+ +H S TM Sbjct: 1 DRKLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRNADSTSKGCAFIKFANRMQAQNAIATMHNSTTM 68 HSP 2 Score: 54.299 bits (129), Expect = 1.611e-9 Identity = 24/67 (35.82%), Postives = 39/67 (58.21%), Query Frame = 2 Query: 461 KLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSL 661 KLFVG I + +E DLR MF +G I E ++LR+ KGCAF+ + +R ++ +H+ ++ Sbjct: 3 KLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRN-ADSTSKGCAFIKFANRMQAQNAIATMHNSTTM 68
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Nematostella
Match: EDO34879 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SN30]) HSP 1 Score: 89.3521 bits (220), Expect = 2.863e-19 Identity = 51/172 (29.65%), Postives = 88/172 (51.16%), Query Frame = 2 Query: 464 LFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQ 979 L + +P S+ + D++ +F G + ++RD+ TG G AF+ Y + + R ++ + + +P+ E K L++ L K+ EE+V LFK FG+I VL+D +G +G FV+F + EA AI L+ ++T+ G + + VKFA+ RQ Sbjct: 12 LIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFARPSSTEIKNAN--LYISGLPKDMKEEEVEALFKPFGKIITSKVLKDVSGEGRGTGFVRFDKRCEAQTAIDDLN-NKTLPGTNVKLTVKFANPPNSRQ 180 HSP 2 Score: 72.4034 bits (176), Expect = 1.106e-13 Identity = 38/91 (41.76%), Postives = 51/91 (56.04%), Query Frame = 2 Query: 1646 GSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIK 1918 G+ E NL I ++PP D+ ++F G +TS K+ DRAT QS + FV+Y N A A++ MNG +L K LKV RP S IK Sbjct: 4 GTSDERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFARPSSTEIK 94 HSP 3 Score: 51.9878 bits (123), Expect = 4.936e-7 Identity = 31/88 (35.23%), Postives = 49/88 (55.68%), Query Frame = 2 Query: 1646 GSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSD 1909 G P+ +F+Y LP E L ++FSP+GAIT+ ++ +D+ +GFV+ +N A AI +NG K L+V K PK++ Sbjct: 249 GLTPQGWCIFVYGLPQEATPLFLYKLFSPYGAITNIELKLDKG------YGFVNMSNYEEACHAICCLNGTPQHGKILQVSFKTPKNN 330
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Medaka
Match: celf4 (CUGBP Elav-like family member 4 [Source:NCBI gene;Acc:101170176]) HSP 1 Score: 431.409 bits (1108), Expect = 2.259e-143 Identity = 251/519 (48.36%), Postives = 326/519 (62.81%), Query Frame = 2 Query: 419 GKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYG-------QTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTA-ALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPV---TAIHSSAQISNLS---DSCVNVSLYQNACLGGQFVNTNSSATSD---SSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 G ++ KD DAIKLF+GQIPR+L E DLRP+FEE+G+IYE ++L+D+ TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGMLNK Q+E+DVRRLF+SFG IEECT+LR +GNSKGCAFVK+SS EA AAISALHGSQTM GASSS+VVKFADT+KER R++QQ+ + + N +AL Q G YG Q L + +P+AA + Q + ++ G+ G + PT+G + ++A T ++ SP+ S F TG N P+ A+ TN H+ PV ++ + L SC V Q C S +D +Y + + A+PA GQ Q+ +++ GPE CNLFIYHLP EFGD +L+QMF PFG + S+KV+VDRATNQSKCFGFVS+ N AQAAIQ+MNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 38 GCPATIPMKDHDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGSIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMAGQMGIFN-PMAL-QFGA--YGAYAQVQQQAALMASVGQGGYLSPMAAFA--AAQMQHMATINGLPGAPLTPTSGGSTPPGISAPTVTSIPSPI--SVNGF---TGMPPPQANGQPPAEAVFTN------------GIHHYPVLQEVVFREDSEKNGLGVAPRSCFGV---QGGCFLSSLSEAQSPTAADPLQQAYTGVQQYA-AYPAAYGQISQAFPHPPPIIPQQQRE----GPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPK-DANRPY 524
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Medaka
Match: celf5b (CUGBP Elav-like family member 5 [Source:NCBI gene;Acc:101171069]) HSP 1 Score: 418.313 bits (1074), Expect = 2.440e-138 Identity = 238/503 (47.32%), Postives = 312/503 (62.03%), Query Frame = 2 Query: 443 KDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNV-SLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPA----PIGQFGQSGLSLTVPQKD----LEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 KD DAIKLF+GQIPR+L+E DL+P+FE++G+I+E ++L+D+ TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGMLNK QTEEDV RLF+ +G IEECTVLR +GNSKGCAFVKFS+ EA +AI ALHGSQTM GASSS+VVKFADT+KER R++QQ++ Q G IFNP AL F S S A +I + Y+ P A A + Q +N N L P P A +++P + ++ A+ S + ++ I + + V ++Y N + N++ T ++ + + +PA PI Q T+PQ ++ GPE CNLFIYHLP EFGD++L+QMF PFG + S+KV++DRATNQSKCFGFVS+ N A AQAAIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 72 KDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSAHTEAQSAIGALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMV------------GQFG-----------------IFNPAIALPF-----STYSSYAHAQQAAIMAASHGGYLTPSVAFPATQIH------QMGPLNI--NSLPPTPMTPVSAGLSSPPANITTSAVPS----IVTPIVNGFTGIPHQPNGHPAVETVYTNGLPPYSTQSPNAADTLQQAFTGVQQYTAIYPATTLTPISQ--------TLPQAPQVIQQQQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK-DASRPY 519
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Medaka
Match: celf3b (CUGBP Elav-like family member 3 [Source:NCBI gene;Acc:101160192]) HSP 1 Score: 412.535 bits (1059), Expect = 1.862e-136 Identity = 244/512 (47.66%), Postives = 312/512 (60.94%), Query Frame = 2 Query: 434 VLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACL---GGQFVNTNSSATSD---SSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKD---------LEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 VL K++DAIKLFVGQIPR+L+E DL+P+FE++G+IYE ++++DK TG+HKGCAFLTYC R+S+ Q ALH+QK+LPGM RP+QVKPA E + E+RKLFVGML K QT+EDVRRLF+ FG I+ECTVLR +G SKGCAFVKF EA AAI++LHGS+TM GASSS+VVKFADTEKER R++QQ+ + L + S + L N Y Q A++ QL Q L + + AY+ PVA A + Q +N AN + P P IT +N+ A+A+ PV A+ ++ S + Q L G S A D +Y + + A+PA G GQ PQ+ ++ GPE CN+FIYHLP EF D ++LQMF PFG + SAKV+VDRATNQSKCFGFVS+ N A AQAAIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 32 VLMKEADAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQTDEDVRRLFEPFGTIDECTVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLRRMQQVASQLGIF-SPMTLNFPAYNAYTQ-----------------AVNAQLVQHQALVAQS-------------AYLSPVATVAAVQMQ------QMAALN--ANGIIATPITP----ITPSSGTNTPPAIAA----TPVPALPPPIGMNGYSSVPAPTNGQQTETLYTNGVHQYQAQSPAALDPLQQAYAGMQHYTAAYPAAYGLVGQP-----FPQQQTLVAQQHQQPQQQQQREGPEGCNIFIYHLPQEFSDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK-DANRPY 490
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Medaka
Match: celf3a (CUGBP Elav-like family member 3 [Source:NCBI gene;Acc:101163095]) HSP 1 Score: 389.037 bits (998), Expect = 6.139e-128 Identity = 231/501 (46.11%), Postives = 307/501 (61.28%), Query Frame = 2 Query: 443 KDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAK--EERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQ--LSPPRIFNPVAAL-SFQLQQTSGL-P-SLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 K+ DAIKLF+GQIPR+L+E DL+P+FE++G+IYE ++++DK TG+HKGCAFLTYC R+S+ Q ALH+QK+LPG++ V P+ E R E+RKLFVGML K QT+ DVR++F+ FG IEECTVLR +G SKGCAFVKF S EA AAI+ALHGS+T+ GASSS+VVKFAD+EKER R++QQ+ + L ++ S + L N Y Q ++ Q ++ +PVA + + Q+QQ + L P S+ SI P++G + +AA L P + N P PS T ++N A HN + V L Q+ AT ++Y + G FP Q L PQ+ +++ GPE CN+FIYHLP EF D ++LQMF PFG + SAKV+VDRATNQSKCFGFVS+ N + AQ AIQAMNGFQ+G+KRLKVQLKRPK D+ +PY Sbjct: 2 KEPDAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNALHEQKTLPGVS----VSPSSCGEGRGDEDRKLFVGMLGKQQTDADVRKMFEPFGSIEECTVLRGPDGTSKGCAFVKFQSNAEAQAAINALHGSRTLPGASSSLVVKFADSEKERGLRRMQQVASQLGVI-SPMTLHLGAYNAYTQALMQQQALVAQSAYLSPVATVAAVQMQQLAALNPNSIIATPIASITPSSGTSTPPSIAATPVPALPPPI----------AVNSYPSVPAPPSGQSATEALYTNGVHAYQGAKHNF-----------------LLVVKLLQSML-----------ATYPAAYSLV---GQPFPH------QPTLVAQQPQQLQQRE----GPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPK-DANRPY 445
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Medaka
Match: ENSORLT00000004865.2 (CUGBP Elav-like family member 2 [Source:NCBI gene;Acc:101175076]) HSP 1 Score: 324.324 bits (830), Expect = 4.626e-102 Identity = 217/519 (41.81%), Postives = 297/519 (57.23%), Query Frame = 2 Query: 401 NGPESNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTG--IHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKT--EERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGIT--GLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLY--QNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGS---GPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 N + NG + D DAIK+FVGQIPRS E++L+ +FE +G +Y+ +ILRD+ KGC F+T+ R+++ Q ALH+ K+L GM P+Q+KPA E+ T E+RKLF+GM++K E +VR +F SFG+IEEC +LR +G S+GCAFV F+++ A AI +H SQTM+G SS +VVKFADT+++++ R+LQQ + ++ A GN+ G L Q AL Q TS S I G +NP Q AA AA S S A N+GA +P G + G S + +AS +T +S ++NL+ +VS N LG N +++++ D+ + + Q+ S L Q +++ + GS GPE NLFIYHLP EFGD DLLQMF PFG + SAKV++D+ TN SKCFGFVSY N AQAAIQAMNGFQ+G+KRLKVQLKR K+DS KPY Sbjct: 27 NSNKMNGSLEHMDQPDPDAIKMFVGQIPRSWTETELKELFEPFGAVYQINILRDRAQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSEKTTAVEDRKLFIGMVSKKYGENEVRMMFSSFGQIEECRILRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKFADTQRDKEQRRLQQQLVQQIQQLNN---ASTWGNLAGLGTLTPQ---------YLALLQQATSTSNQGSFNSIQRLGAGVNPLQLQNLATLAAAAAAAQSSASPASTSALSTNSGALGALASPAG------STAGTSAAMNTLASLGTLQGLTG--NSVGLNNLNALTSSVSGMGAMNGGLGASMANGSAASSMDALTQAYSG--------MQQYTASALPSLYSQTLIQQSIAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDS-KPY 516
BLAST of CUGBP, Elav-like family member 4 vs. Planmine SMEST
Match: SMESG000026947.1 (SMESG000026947.1) HSP 1 Score: 1096.26 bits (2834), Expect = 0.000e+0 Identity = 532/532 (100.00%), Postives = 532/532 (100.00%), Query Frame = 2 Query: 329 MEYRMSLANNLSNQINSKTMGKISNGPESNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 MEYRMSLANNLSNQINSKTMGKISNGPESNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY Sbjct: 1 MEYRMSLANNLSNQINSKTMGKISNGPESNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 532
BLAST of CUGBP, Elav-like family member 4 vs. Planmine SMEST
Match: SMESG000026947.1 (SMESG000026947.1) HSP 1 Score: 904.049 bits (2335), Expect = 0.000e+0 Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 2 Query: 329 MEYRMSLANNLSNQINSKTMGKISNGPESNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGS 1651 MEYRMSLANNLSNQINSKTMGKISNGPESNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGS Sbjct: 1 MEYRMSLANNLSNQINSKTMGKISNGPESNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGS 441 HSP 2 Score: 70.8626 bits (172), Expect = 1.791e-12 Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 1 Query: 1654 TGRLQPVHISPTSGVWRPRSAADVQSLWSHH 1746 TGRLQPVHISPTSGVWRPRSAADVQSLWSHH Sbjct: 450 TGRLQPVHISPTSGVWRPRSAADVQSLWSHH 480
BLAST of CUGBP, Elav-like family member 4 vs. Planmine SMEST
Match: SMESG000026947.1 (SMESG000026947.1) HSP 1 Score: 894.034 bits (2309), Expect = 0.000e+0 Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 2 Query: 341 MSLANNLSNQINSKTMGKISNGPESNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGS 1651 MSLANNLSNQINSKTMGKISNGPESNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGS Sbjct: 1 MSLANNLSNQINSKTMGKISNGPESNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPIGQFGQSGLSLTVPQKDLEKDMGGS 437 HSP 2 Score: 70.4774 bits (171), Expect = 1.915e-12 Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 1 Query: 1654 TGRLQPVHISPTSGVWRPRSAADVQSLWSHH 1746 TGRLQPVHISPTSGVWRPRSAADVQSLWSHH Sbjct: 446 TGRLQPVHISPTSGVWRPRSAADVQSLWSHH 476
BLAST of CUGBP, Elav-like family member 4 vs. Planmine SMEST
Match: SMESG000046617.1 (SMESG000046617.1) HSP 1 Score: 368.237 bits (944), Expect = 5.722e-120 Identity = 227/508 (44.69%), Postives = 294/508 (57.87%), Query Frame = 2 Query: 461 KLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAK----------------EERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNL--SDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPI-GQFGQSGL-SLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPKSDSIKPY 1924 KLFVGQIPR+ + ++R +FE +G I+EF ILRDK TG HKGCAF+T+ H+ S+E CQ+ALHD+K L GM RPLQVKPAK E+ ++ERKLFVGML+KNQT+E+V+ +F FG+IEECTVL+DQNGNSKGCAFVKF + +A AAI+ALH SQ M+GASSS+VVKFADT+K++Q RKLQQ I L+++NS + + + YG I NP + S +PS I N YI +AQ IN +N + P SNS ++M S + PV I S I+N +D + + + V + + + S S P + P F L S T D++ +GPE CNLFIYHLP E GD L Q+F FG + S+KVYVDRATNQSKCFGFVSY + A A AAI++MNG+ +G KRLKVQLK+PK S +PY Sbjct: 6 KLFVGQIPRNTPDKEIRLIFEAFGPIFEFLILRDKKTGFHKGCAFVTFYHKDSAENCQKALHDKKILNGMNRPLQVKPAKNKLAKNSSLNGENQTEEQVFSDERKLFVGMLSKNQTDENVQNMFTKFGKIEECTVLKDQNGNSKGCAFVKFVNHTDACAAINALHASQKMEGASSSLVVKFADTDKQKQIRKLQQYIPDLSILNSRIPIHIPYYSQYG-----------TIINP--------EYNSTIPSNQYI-------RNCNEYI---------------LAAQIQQINLFSNLSSVYP-------------SNSIVSMPSSH---PVPMIDYSVPINNFPQTDQITMKPIVDMQPIPPEAV--HRTIVTPGSLLSYPFLNVQIPTVYPNAFSNGNLTSTTQSSTDVKTTPLPTGPEGCNLFIYHLPQEIGDLQLYQIFMHFGNVISSKVYVDRATNQSKCFGFVSYDDPACANAAIKSMNGYHIGTKRLKVQLKKPKGFS-RPY 453 HSP 2 Score: 61.2326 bits (147), Expect = 1.598e-9 Identity = 35/113 (30.97%), Postives = 65/113 (57.52%), Query Frame = 2 Query: 392 KISNGPESNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKL 730 K++ NG++ + SD KLFVG + ++ + +++ MF ++G+I E ++L+D+ G KGCAF+ + + + A ALH + + G + L VK A +++ + RKL Sbjct: 87 KLAKNSSLNGENQTEEQVFSDERKLFVGMLSKNQTDENVQNMFTKFGKIEECTVLKDQ-NGNSKGCAFVKFVNHTDACAAINALHASQKMEGASSSLVVKFADTDKQKQIRKL 198
BLAST of CUGBP, Elav-like family member 4 vs. Planmine SMEST
Match: SMESG000046617.1 (SMESG000046617.1) HSP 1 Score: 367.466 bits (942), Expect = 2.053e-119 Identity = 224/501 (44.71%), Postives = 290/501 (57.88%), Query Frame = 2 Query: 461 KLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAK----------------EERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGITGLSINPTNGQAYIDPVAANTAALLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNL--SDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPAPI-GQFGQSGL-SLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPK 1903 KLFVGQIPR+ + ++R +FE +G I+EF ILRDK TG HKGCAF+T+ H+ S+E CQ+ALHD+K L GM RPLQVKPAK E+ ++ERKLFVGML+KNQT+E+V+ +F FG+IEECTVL+DQNGNSKGCAFVKF + +A AAI+ALH SQ M+GASSS+VVKFADT+K++Q RKLQQ I L+++NS + + + YG I NP + S +PS I N YI +AQ IN +N + P SNS ++M S + PV I S I+N +D + + + V + + + S S P + P F L S T D++ +GPE CNLFIYHLP E GD L Q+F FG + S+KVYVDRATNQSKCFGFVSY + A A AAI++MNG+ +G KRLKVQLK+PK Sbjct: 6 KLFVGQIPRNTPDKEIRLIFEAFGPIFEFLILRDKKTGFHKGCAFVTFYHKDSAENCQKALHDKKILNGMNRPLQVKPAKNKLAKNSSLNGENQTEEQVFSDERKLFVGMLSKNQTDENVQNMFTKFGKIEECTVLKDQNGNSKGCAFVKFVNHTDACAAINALHASQKMEGASSSLVVKFADTDKQKQIRKLQQYIPDLSILNSRIPIHIPYYSQYG-----------TIINP--------EYNSTIPSNQYI-------RNCNEYI---------------LAAQIQQINLFSNLSSVYP-------------SNSIVSMPSSH---PVPMIDYSVPINNFPQTDQITMKPIVDMQPIPPEAV--HRTIVTPGSLLSYPFLNVQIPTVYPNAFSNGNLTSTTQSSTDVKTTPLPTGPEGCNLFIYHLPQEIGDLQLYQIFMHFGNVISSKVYVDRATNQSKCFGFVSYDDPACANAAIKSMNGYHIGTKRLKVQLKKPK 447 HSP 2 Score: 61.6178 bits (148), Expect = 1.268e-9 Identity = 35/113 (30.97%), Postives = 65/113 (57.52%), Query Frame = 2 Query: 392 KISNGPESNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKL 730 K++ NG++ + SD KLFVG + ++ + +++ MF ++G+I E ++L+D+ G KGCAF+ + + + A ALH + + G + L VK A +++ + RKL Sbjct: 87 KLAKNSSLNGENQTEEQVFSDERKLFVGMLSKNQTDENVQNMFTKFGKIEECTVLKDQ-NGNSKGCAFVKFVNHTDACAAINALHASQKMEGASSSLVVKFADTDKQKQIRKL 198 The following BLAST results are available for this feature:
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of CUGBP, Elav-like family member 4 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of CUGBP, Elav-like family member 4 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of CUGBP, Elav-like family member 4 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of CUGBP, Elav-like family member 4 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30018441 ID=SMED30018441|Name=CUGBP, Elav-like family member 4|organism=Schmidtea mediterranea sexual|type=transcript|length=2249bpback to top protein sequence of SMED30018441-orf-1 >SMED30018441-orf-1 ID=SMED30018441-orf-1|Name=SMED30018441-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=533bp MEYRMSLANNLSNQINSKTMGKISNGPESNGKSTSVLSKDSDAIKLFVGQback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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