G_PROTEIN_RECEP_F1_2 domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30018368 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A4E0RDS9 (Rhodopsin orphan GPCR OS=Fasciola hepatica OX=6192 GN=D915_002290 PE=4 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 3.323e-88 Identity = 164/391 (41.94%), Postives = 221/391 (56.52%), Query Frame = 1 Query: 61 YFLRWYLIIVTTFGLLGTVFCLVFLHLSKLFPKSMLLWLVSICIGDMMIIINETLWMIGKVFYKFDLRDVNDVLCVLHTFLSNYFFYWSAYMQALMSIQRCIFTILPIRARFLFPYKRTL-LIWFTVTMSIVFPHIYYIIYWRVRNGDCDPPSSKYFGVTSLCDMIIWGIIPLGTMTITTAIICWAI--------------------------------RQPIENNLKI---------KAVSINSLCADINIQNHHRSLGNIEIRRGMNTCDV----------------------QKRNTKREAANHITYLLIFMNIWYIITTYPLLIYFMILNFTINSQTISSSSHKFYYYLFRSICYLNACSNWIFYCAAGKVFRNKTMEIIHQIYREF 1041 YFL+WYL V G GTVFCLVFL LS+LFP +MLLWLVSIC+GD +I++ E +WM+ KV+ +D+RD+N+V CVLHT SNY +YWSAYMQ ++S+QR I P+RAR P + L +W ++++ +V P + Y +YWRV +GDCDPP F +T+L D IIW +IPL MT TAIICW I R + N + I + S N + ++ QN + + R MN D +R+ + A H+T LLI MNIWY+I+TYPL+IY M LNF ++ + HKF YYL RS+C+LN+CSNWIFYCA+G++FR + I QI R F Sbjct: 58 YFLKWYLPFVVGVGSFGTVFCLVFLFLSRLFPANMLLWLVSICVGDFLILVMEGIWMLLKVWLNYDIRDINNVACVLHTSFSNYLYYWSAYMQCMLSMQRAYLIIRPLRARGSGPNMKWLAFVWTSISVLLVIPMLPYPLYWRVIDGDCDPPRESLFRITTLSDFIIWSLIPLIGMTSATAIICWNIFRIRRSFQSGGITAFAQNNSSHSTLTYVCPPTRSSLPNRMSILERDRLFIRSSRSQNRITNRVSQQN--KLAPAVNARNTMNRLDKTSIFTDNTVAFVRPVSFAHNNQGQRHGSTDNAGHVTRLLICMNIWYMISTYPLMIYLMFLNFI--TKDMDRDIHKFMYYLSRSLCFLNSCSNWIFYCASGRLFRQR----IKQICRRF 440
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A267DN13 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig001214g1 PE=4 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 7.504e-86 Identity = 142/333 (42.64%), Postives = 210/333 (63.06%), Query Frame = 1 Query: 46 SYLCFYFLRWYLIIVTTFGLLGTVFCLVFLHLSKLFPKSMLLWLVSICIGDMMIIINETLWMIGKVFYKFDLRDVNDVLCVLHTFLSNYFFYWSAYMQALMSIQRCIFTILPIRARFLFPYKRTLLIWFTVTMSIVFPHIYYIIYWRV-RNGDCDPPSSKYFGVTSLCDMIIWGIIPLGTMTITTAIICWAIRQPIENNLKIKAVSINSLCADINIQNHHRSLGNIEIRRGMNTCDVQKRNTKREAANHITYLLIFMNIWYIITTYPLLIYFMILNFTINSQ---TISSSSHKFYYYLFRSICYLNACSNWIFYCAAGKVFRNKTMEIIHQIY 1032 S L YFL WYL ++ T G G VFC++F+ +S++FPK + +WLVSIC GD MI+I + L + K+ + +D D V+C L ++ S++FF+WSAY QA MSIQR +F P+R+R + KR + W T+T ++FP+I Y+IYW + R DC+P ++ VT+L +I WGIIPL +M ++T I + + + N K A + + +D+ G + + R + H+T LL+ MN++Y+ TT+PLLIY M LNF ++Q +I+ S HKFYYYLFRSIC+LNA NW+FYCAAGKVFR K M+I+++I+ Sbjct: 29 SGLTRYFLIWYLPLILTIGTFGAVFCMLFIFMSRMFPKIIQVWLVSICFGDFMILIWDVLRLFLKLAFGYDYIDQGVVICKLQSYFSSFFFHWSAYNQAAMSIQRLVFIASPLRSRTILNTKRVMTTWATMTFLLLFPNITYLIYWHIGRKSDCEPVDKWFYYVTTLVHLIAWGIIPLASMVVSTGCISYRLIRYRRGNFK-AAKTKDGRGSDVG--------GGVP-----QPAVIGGRRHGSDQNAHVTRLLVSMNLFYLFTTFPLLIYMMYLNFVKDNQVGKSIAKSLHKFYYYLFRSICFLNASLNWVFYCAAGKVFRQKAMQILYRIF 347
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A267GDB7 (G_PROTEIN_RECEP_F1_2 domain-containing protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig001214g3 PE=4 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 1.711e-83 Identity = 140/334 (41.92%), Postives = 203/334 (60.78%), Query Frame = 1 Query: 43 FSYLCFYFLRWYLIIVTTFGLLGTVFCLVFLHLSKLFPKSMLLWLVSICIGDMMIIINETLWMIGKVFYKFDLRDVNDVLCVLHTFLSNYFFYWSAYMQALMSIQRCIFTILPIRARFLFPYKRTLLIWFTVTMSIVFPHIYYIIYWRV-RNGDCDPPSSKYFGVTSLCDMIIWGIIPLGTMTITTAIICWAIRQPIENNLKIKAVSINSLCADINIQNHHRSLGNIEIRRGMNTCDVQKRNTKREAANHITYLLIFMNIWYIITTYPLLIYFMILNFTINSQ---TISSSSHKFYYYLFRSICYLNACSNWIFYCAAGKVFRNKTMEIIHQIY 1032 S L YFL WYL ++ T G G VFC++F+ +S++FPK + +WLVSIC GD MI+I + L + K+ + +D D V+C L ++ S++FF+WSAY QA MSIQR +F P+R+R + KR + W T+T ++FP+I Y+IYW + R DC+P ++ VT+L +I WGIIPL +M ++T I + + + N K +G R + H+T LL+ MN++Y+ TT+PLLIY M LNF ++Q +I+ S HKFYYYLFRSIC+LNA NW+FYCAAGKVFR K M+I+++I+ Sbjct: 84 LSGLTRYFLIWYLPLILTIGTFGAVFCMLFIFMSRMFPKIIQVWLVSICFGDFMILIWDVLRLFLKLAFGYDYIDQGVVICKLQSYFSSFFFHWSAYNQAAMSIQRLVFIASPLRSRTILNTKRVMTTWATMTFLLLFPNITYLIYWHIGRKSDCEPVDKWFYYVTTLVHLIAWGIIPLASMVVSTGCISYRLIRYRRGNFKAAKTKDGRGSDGGGGVPQPAVIGG--------------RRHGSDQNAHVTRLLVSMNLFYLFTTFPLLIYMMYLNFVKDNQVGKSIAKSLHKFYYYLFRSICFLNASLNWVFYCAAGKVFRQKAMQILYRIF 403
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A183B2S4 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS13509 PE=4 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 7.690e-83 Identity = 149/372 (40.05%), Postives = 210/372 (56.45%), Query Frame = 1 Query: 61 YFLRWYLIIVTTFGLLGTVFCLVFLHLSKLFPKSMLLWLVSICIGDMMIIINETLWMIGKVFYKFDLRDVNDVLCVLHTFLSNYFFYWSAYMQALMSIQRCIFTILPIRARFLFPYKRTLLI-WFTVTMSIVFPHIYYIIYWRVRNGDCDPPSSKYFGVTSLCDMIIWGIIPLGTMTITTAIICWAIRQPIE--------------NNLKIKAVSINSLCADI-----------------NIQNHHRSLGNIEI--------RR-------GMNTCDVQKRNTKR--EAANHITYLLIFMNIWYIITTYPLLIYFMILNFTINSQTISSSSHKFYYYLFRSICYLNACSNWIFYCAAGKVFRNKTMEIIHQI 1029 YFL+WYL +V T G G+VFC+VFL S++FPK+M +WL+SICIGD +I+ E +WM+ KV+Y FD+RDVND LC+LHT SNY FYWSAY+Q +S+QRC + P+ F R LLI F ++ ++ P + Y IYWRV +GDCDP + F +T++CD++ WG+IP+ M +T II + Q + N L + + L + +++N +S+ I + RR M Q + +R + NH+T LLI MN Y+ + YPL+IYF+ LNF +S + H+F YYLFRS C+LNACSNWIFYC AG FR + + I Sbjct: 38 YFLQWYLPLVITLGFFGSVFCMVFLTRSQMFPKNMRIWLISICIGDFLILAMEGIWMLLKVWYSFDIRDVNDTLCILHTAFSNYLFYWSAYVQCFVSMQRCYLVLKPLHVNAQFLSARNLLICLFLTSVLLIVPILPYAIYWRVIDGDCDPVNDDIFRLTTVCDLVFWGLIPVVLMATSTVIIWRNLLQRRQMFDSLGNFKPGARINGLDLTGTNNGGLPKKVSRPKRHSVAVCRMQIHDDVKNRSKSVAKILVSTPNTSPSRRVSQFALPSMKIACGQGNSKRRGTDGNNHVTLLLICMNFVYMTSVYPLIIYFICLNFIFHS--LDKDIHRFIYYLFRSFCFLNACSNWIFYCVAGGTFRRRIKHLFRLI 407
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A504YFZ4 (Rhodopsin orphan GPCR OS=Fasciola gigantica OX=46835 GN=FGIG_04224 PE=4 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 1.187e-82 Identity = 158/391 (40.41%), Postives = 217/391 (55.50%), Query Frame = 1 Query: 61 YFLRWYLIIVTTFGLLGTVFCLVFLHLSKLFPKSMLLWLVSICIGDMMIIINETLWMIGKVFYKFDLRDVNDVLCVLHTFLSNYFFYWSAYMQALMSIQRCIFTILPIRARFLFPYKRTL-LIWFTVTMSIVFPHIYYIIYWRVRNGDCDPPSSKYFGVTSLCDMIIWGIIPL-GTMTITTAI-------------------------------ICWAIRQPIENNLKI---------KAVSINSLCADINIQNHHRSLGNIEIRRGMNTCD----------------------VQKRNTKREAANHITYLLIFMNIWYIITTYPLLIYFMILNFTINSQTISSSSHKFYYYLFRSICYLNACSNWIFYCAAGKVFRNKTMEIIHQIYREF 1041 YFL+WYL V G GTVFCLVFL LS+LFP +MLLWLVSIC+GD +I++ E +WM+ KV+ +D+RD+N+V CVLHT SNY +YWSAYMQ ++S+QR I P+RAR P + L +W ++++ +V P + Y +YWRV +GDCDPP F +T+L D IIW +IPL G + T I +C R + N + + + N + ++ QN + R+ MN D +R+ + A H+T LLI MNIWY+I+TYPL+IY M LNF I + + HKF YYL RS+C+LN+CSNWIFYCA+G++FR + I QI R F Sbjct: 58 YFLKWYLPFVVGVGSFGTVFCLVFLFLSRLFPANMLLWLVSICVGDFLILVMEGIWMLLKVWLNYDIRDINNVACVLHTSFSNYLYYWSAYMQCMLSMQRAYLIIRPLRARGSGPNMKWLAFVWTSISVLLVIPMLPYPLYWRVIDGDCDPPRESLFRITTLSDFIIWSLIPLIGMTSATAIICWNIFRIRRSFQSGGITAFAQNNSSHSTLTYVCPPTRSSLPNRISTLERDRLFIRSSRTQNRITNRVSQQN--VLAPAVNARKTMNRLDKTSIFTDNTVAFVRPVSFAHNNQGQRHGSTDNAGHVTRLLICMNIWYMISTYPLMIYLMFLNFII--KDMDRDIHKFMYYLSRSLCFLNSCSNWIFYCASGRLFRQR----IKQICRRF 440
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000081941.1 (SMESG000081941.1) HSP 1 Score: 712.22 bits (1837), Expect = 0.000e+0 Identity = 347/349 (99.43%), Postives = 348/349 (99.71%), Query Frame = 1 Query: 1 NSPISFECQTESIPFSYLCFYFLRWYLIIVTTFGLLGTVFCLVFLHLSKLFPKSMLLWLVSICIGDMMIIINETLWMIGKVFYKFDLRDVNDVLCVLHTFLSNYFFYWSAYMQALMSIQRCIFTILPIRARFLFPYKRTLLIWFTVTMSIVFPHIYYIIYWRVRNGDCDPPSSKYFGVTSLCDMIIWGIIPLGTMTITTAIICWAIRQPIENNLKIKAVSINSLCADINIQNHHRSLGNIEIRRGMNTCDVQKRNTKREAANHITYLLIFMNIWYIITTYPLLIYFMILNFTINSQTISSSSHKFYYYLFRSICYLNACSNWIFYCAAGKVFRNKTMEIIHQIYREFQC 1047 NSPISFECQTESIPFSYLCFYFLRWYLIIVTTFGLLGTVFCLVFLHLSKLFPKSMLLWLVSICIGDMMIIINETLWMIGKVFYKFDLRDVNDVLCVLHTFLSNYFFYWSAYMQALMSIQRCIFTILPIRARFLFPYKRTLLIWFTVTMSIVFPHIYYIIYWRVRNGDCDPPSSKYFGVTSLCDMIIWGIIPLGTMTITTAIICWAIRQPIENNLKIKAVSINSLCADINIQNHH SLGN+EIRRGMNTCDVQKRNTKREAANHITYLLIFMNIWYIITTYPLLIYFMILNFTINSQTISSSSHKFYYYLFRSICYLNACSNWIFYCAAGKVFRNKTMEIIHQIYREFQC Sbjct: 30 NSPISFECQTESIPFSYLCFYFLRWYLIIVTTFGLLGTVFCLVFLHLSKLFPKSMLLWLVSICIGDMMIIINETLWMIGKVFYKFDLRDVNDVLCVLHTFLSNYFFYWSAYMQALMSIQRCIFTILPIRARFLFPYKRTLLIWFTVTMSIVFPHIYYIIYWRVRNGDCDPPSSKYFGVTSLCDMIIWGIIPLGTMTITTAIICWAIRQPIENNLKIKAVSINSLCADINIQNHHPSLGNVEIRRGMNTCDVQKRNTKREAANHITYLLIFMNIWYIITTYPLLIYFMILNFTINSQTISSSSHKFYYYLFRSICYLNACSNWIFYCAAGKVFRNKTMEIIHQIYREFQC 378
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000058719.1 (SMESG000058719.1) HSP 1 Score: 308.916 bits (790), Expect = 4.649e-103 Identity = 160/345 (46.38%), Postives = 225/345 (65.22%), Query Frame = 1 Query: 52 LCFYFLRWYLIIVTTFGLLGTVFCLVFLHLSKLFPKSMLLWLVSICIGDMMIIINETLWMIGKVFYKFDLRDVNDVLCVLHTFLSNYFFYWSAYMQALMSIQRCIFTILPIRARFLFPYKRTLLIWFTVTMSIVFPHIYYIIYWRVRNGDCDPPSSKYFGVTSLCDMIIWGIIPLGTMTITTAIICW-----------AIRQP--IENNLKIKAVSINSLCADINIQNH----HRSLGNIEIRRGMNTCDVQ-KRNTKREAANHITYLLIFMNIWYIITTYPLLIYFMILNFTINSQTISSSSHKFYYYLFRSICYLNACSNWIFYCAAGKVFRNKTMEIIHQIY 1032 +C Y+L W L ++ G+LG++FCL+FL +SKLFP+++LLWL+SIC+GD MIII +TLWM+ K++ D+RDVND +C +H FLSNYFFYWSAYMQALMS+QR + PI+AR R +IW V++ +V PHI Y+ +WR+ +GDCDP SK + T+LCDMIIWGIIP +M +T++ICW +I +P I + ++ + S ++ N QN +S+ N I + Q R+ A H+T LL+ MNIWY+ITT+P LI+ M LNF + I + KFYY+LFRS +LNACSNW FYCA GK+FR+ +I +++ Sbjct: 1 MCKYYLSWILPLIMLVGVLGSIFCLLFLTMSKLFPRTLLLWLISICVGDFMIIILDTLWMLLKMWIGLDIRDVNDFICAVHKFLSNYFFYWSAYMQALMSLQRVYLILRPIQARSSLNMSRMTIIWGLVSIVLVLPHIIYLTHWRIIDGDCDPYDSKNYIFTTLCDMIIWGIIPFLSMVGSTSVICWNICKYQSNFYSSISKPSIIYSFVRSRTFSCSN-HETFNTQNDMELLEKSIDNASIWSSPGSLRQQSSRHGGNNVARHVTQLLVSMNIWYMITTFPFLIFLMYLNFV--NPKIDEWTRKFYYFLFRSFAFLNACSNWFFYCATGKLFRSTAKMVIMKLF 342
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000035253.1 (SMESG000035253.1) HSP 1 Score: 272.707 bits (696), Expect = 1.423e-88 Identity = 149/357 (41.74%), Postives = 216/357 (60.50%), Query Frame = 1 Query: 37 IPFSYLCFYFLRWYLIIVTTFGLLGTVFCLVFLHLSKLFPKSMLLWLVSICIGDMMIIINETLWMIGKVFYKFDLRDVNDVLCVLHTFLSNYFFYWSAYMQALMSIQRCIFTILPIRARFLFPYKRTLLIWFTVTMSIVFPHIYYIIYWRVRNGDCDPPSSKYFGVTSLCDMIIWGIIPLGTMTITTAII----CWAIRQPIENNLKIKAVSINSLCADINI-------------------------QNHHRSLGNIEIRRGMNTCDVQKRNTKREAANHITYLLIFMNIWYIITTYPLLIYFMILNFTINSQTISSSSHKFYYYLFRSICYLNACSNWIFYCAAGKVFRNKTMEII 1020 + F +C ++L W L ++ G++G+VFCL+FL SKLFPK++LLWLVSIC+ D+MI++ + LWM+ K++ FD+RD+N+ LC+ H FLSNYFFYWSAYMQ ++SIQR + P++AR R +++W +++ ++FPH+ Y++ WRVR GDCDP S F VTSLCD+IIWGIIP M I+T II C + L V + + + + Q ++ G+ E N +++ + A H+T LLI MN+WY++TT+PLLI+ + +NF I+S KF YYL RS + NACSNWIFYCAAGK+FR +I+ Sbjct: 23 LQFRMMCKFYLSWVLPMIIIVGIVGSVFCLIFLLFSKLFPKNLLLWLVSICVADLMILLLDGLWMLLKMWIGFDIRDINNFLCISHKFLSNYFFYWSAYMQTMVSIQRAYLIMRPLQARTSLVLPRLVIVWIGLSVLLIFPHVIYVVKWRVRKGDCDPQDSSDFHVTSLCDLIIWGIIPFLAMVISTCIISINVCTFQSRTFAPRLSTPKVVYSFVRNNPSTFIGRTQTVNPSESSSNNSHSMKFIKQINYGHEGSPEF-LSQNYVSPGRKHGGVDTAKHVTQLLIGMNLWYLLTTFPLLIFLIYINFI--DPDINSWKRKFLYYLLRSFSFYNACSNWIFYCAAGKLFRTTAKQIL 376
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000042257.1 (SMESG000042257.1) HSP 1 Score: 216.083 bits (549), Expect = 2.928e-67 Identity = 130/335 (38.81%), Postives = 190/335 (56.72%), Query Frame = 1 Query: 61 YFLRWYLIIVTTFGLLGTVFCLVFLHLSKLFPKSMLLWLVSICIGDMMIIINETLWMIGKVFYKFDLRDVNDVLCVLHTFLSNYFFYWSAYMQALMSIQRCIFTILPIRARFLFPYKRTLLIWFTVTMSIVFPHIYYIIYWRV----RNGDCDPPSSKYFGVTSLCDMIIWGIIPLGTMTITTAIICWAIRQPIENNLKIKAVSINSLCADINIQNHHRSLGNIEIRRGMNTCDVQKRNTKREAANHITYLLIFMNIWYIITTYPLLIYFMILNFTIN--SQTISSSSHKFYYYLFRSICYLNACSNWIFYCAAGKVFRNKTMEIIHQIYREFQC 1047 Y+L WYL I G++G + C FL +SK+FPK++L+W++SICIGD+MI++ + L M+ KV+ FD+RD N+ +C +H F SNYF YWS YMQ MSIQR I + P++AR +F K L +W +V++ + P + Y++YW+V + DC P + + + ++ D+ IWGIIPL TM +T I + + + S + Q+ L N RR E A +T LLI MNI Y I+ +PLLIY + LN N +++ HK YY RSICYL++ NW+FYC G FR + ++II R F C Sbjct: 27 YYLNWYLPITIFVGIIGGIVCATFLIISKIFPKNVLIWMLSICIGDLMILLLDALRMLLKVWIGFDIRDFNNTICKMHNFFSNYFIYWSGYMQTCMSIQRLISILNPLKARGMFTNKLVLSVWVSVSVLLTGPMVPYLLYWQVSEEKQGKDCSPVNKNLYTLITVLDITIWGIIPLLTMITSTIGISFVVFKS------------TSEVGTFSSQSQSVKLVNNSSRR--------HAQVNNERAWQVTRLLICMNILYFISNFPLLIYQIYLNAGGNKVDKSMPQQLHKTIYYTLRSICYLSSSWNWVFYCVGGHQFRTRALQII----RRFNC 337
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000042263.1 (SMESG000042263.1) HSP 1 Score: 64.3142 bits (155), Expect = 1.377e-12 Identity = 33/76 (43.42%), Postives = 59/76 (77.63%), Query Frame = 1 Query: 61 YFLRWYLIIVTTFGLLGTVFCLVFLHLSKLFPKSMLLWLVSICIGDMMIIINETLWMIGKVFYKFDLRDVNDVLCV 288 Y+L WYL ++ G++G + C +FL +SK+FPK++L+W++SICIGD+MI++ + L M+ K++++FD+RD+ C+ Sbjct: 31 YYLSWYLPVIIFVGIIGGIVCGIFLIISKIFPKNVLIWMLSICIGDLMILLFDALRMLFKMWFRFDIRDLTLTSCL 106 The following BLAST results are available for this feature:
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30018368 ID=SMED30018368|Name=G_PROTEIN_RECEP_F1_2 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1048bpback to top protein sequence of SMED30018368-orf-1 >SMED30018368-orf-1 ID=SMED30018368-orf-1|Name=SMED30018368-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=349bp NSPISFECQTESIPFSYLCFYFLRWYLIIVTTFGLLGTVFCLVFLHLSKLback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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