SMED30018355
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30018355 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 2
Alignments
SMED30018355 aligns in the following genomic locations:
Homology
BLAST of SMED30018355 vs. TrEMBL
Match: A0A3R7AKB1 (Uncharacterized protein OS=Aphanomyces astaci OX=112090 GN=DYB35_004616 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.541e-8 Identity = 38/118 (32.20%), Postives = 55/118 (46.61%), Query Frame = 3 Query: 1146 LIEKENFNIEGNSDKWSCNQCSFKNDKTDLLCSLCYANNPYENTSH--DVEDTWNCSKCKMKNPFDRYRCHQCD-GLAGFF----DKWVCEK----CSFFNEKLDRNCYVCDLVNSNL 1466 +++K N E D W C C+F+ND C +C N P ++T +V TW C C NP C C+ G +G DKW+C+ C++FN K C VC+ +L Sbjct: 3774 MVDKSNKPDEHTQDPWLCVVCTFQNDGLVTSCVMC--NEPRDHTKQGAEVAQTWQCENCTFINPIAETTCAVCEMGASGRREVPKDKWICDPEQGGCTYFNLKTAFYCDVCNRARPDL 3889
BLAST of SMED30018355 vs. TrEMBL
Match: A0A418E4F8 (Uncharacterized protein OS=Aphanomyces astaci OX=112090 GN=DYB37_005301 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.541e-8 Identity = 38/118 (32.20%), Postives = 55/118 (46.61%), Query Frame = 3 Query: 1146 LIEKENFNIEGNSDKWSCNQCSFKNDKTDLLCSLCYANNPYENTSH--DVEDTWNCSKCKMKNPFDRYRCHQCD-GLAGFF----DKWVCEK----CSFFNEKLDRNCYVCDLVNSNL 1466 +++K N E D W C C+F+ND C +C N P ++T +V TW C C NP C C+ G +G DKW+C+ C++FN K C VC+ +L Sbjct: 3774 MVDKSNKPDEHTQDPWLCVVCTFQNDGLVTSCVMC--NEPRDHTKQGAEVAQTWQCENCTFINPIAETTCAVCEMGASGRREVPKDKWICDPEQGGCTYFNLKTAFYCDVCNRARPDL 3889
BLAST of SMED30018355 vs. TrEMBL
Match: A0A397DRG3 (Uncharacterized protein OS=Aphanomyces astaci OX=112090 GN=DYB30_002991 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.541e-8 Identity = 38/118 (32.20%), Postives = 55/118 (46.61%), Query Frame = 3 Query: 1146 LIEKENFNIEGNSDKWSCNQCSFKNDKTDLLCSLCYANNPYENTSH--DVEDTWNCSKCKMKNPFDRYRCHQCD-GLAGFF----DKWVCEK----CSFFNEKLDRNCYVCDLVNSNL 1466 +++K N E D W C C+F+ND C +C N P ++T +V TW C C NP C C+ G +G DKW+C+ C++FN K C VC+ +L Sbjct: 3775 MVDKSNKPDEHTQDPWLCVVCTFQNDGLVTSCVMC--NEPRDHTKQVAEVAQTWQCENCTFINPIAETTCAVCEMGASGRREVPKDKWICDPEQGGCTYFNLKTAFYCDVCNRARPDL 3890
BLAST of SMED30018355 vs. TrEMBL
Match: W4GLA5 (Uncharacterized protein OS=Aphanomyces astaci OX=112090 GN=H257_06741 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.545e-8 Identity = 38/118 (32.20%), Postives = 55/118 (46.61%), Query Frame = 3 Query: 1146 LIEKENFNIEGNSDKWSCNQCSFKNDKTDLLCSLCYANNPYENTSH--DVEDTWNCSKCKMKNPFDRYRCHQCD-GLAGFF----DKWVCEK----CSFFNEKLDRNCYVCDLVNSNL 1466 +++K N E D W C C+F+ND C +C N P ++T +V TW C C NP C C+ G +G DKW+C+ C++FN K C VC+ +L Sbjct: 3812 MVDKSNKPDEHTQDPWLCVVCTFQNDGLVTSCVMC--NEPRDHTKQVAEVAQTWQCENCTFINPIAETTCAVCEMGASGRREVPKDKWICDPEQGGCTYFNLKTAFYCDVCNRARPDL 3927
BLAST of SMED30018355 vs. TrEMBL
Match: A0A3R7ZHI3 (Uncharacterized protein OS=Aphanomyces astaci OX=112090 GN=B5M09_007115 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.545e-8 Identity = 38/118 (32.20%), Postives = 55/118 (46.61%), Query Frame = 3 Query: 1146 LIEKENFNIEGNSDKWSCNQCSFKNDKTDLLCSLCYANNPYENTSH--DVEDTWNCSKCKMKNPFDRYRCHQCD-GLAGFF----DKWVCEK----CSFFNEKLDRNCYVCDLVNSNL 1466 +++K N E D W C C+F+ND C +C N P ++T +V TW C C NP C C+ G +G DKW+C+ C++FN K C VC+ +L Sbjct: 3812 MVDKSNKPDEHTQDPWLCVVCTFQNDGLVTSCVMC--NEPRDHTKQVAEVAQTWQCENCTFINPIAETTCAVCEMGASGRREVPKDKWICDPEQGGCTYFNLKTAFYCDVCNRARPDL 3927
BLAST of SMED30018355 vs. Planmine SMEST
Match: SMESG000022833.1 (SMESG000022833.1) HSP 1 Score: 1194.49 bits (3089), Expect = 0.000e+0 Identity = 605/611 (99.02%), Postives = 607/611 (99.35%), Query Frame = 3 Query: 78 MNLENILNTDLRYKIIFYLKDVLKSSISKINNVDEXXXXXXXXXXCTDELKELDEEVLYVNLAASKAISQLAWNAYQNNGLYKDCHINAQYLEKIYFIMGNSNLYTNYLDKFKLGTEFLENVLIEMLSRYIIIHCILYYKEIDNLMFKSCIYCDCVVIGDICSVCEGNSFVLKDKSGDPMTFDFPFITDNVTDLKNQDLSSSSSNPTDCLESVSDSIKTKDNDELNSTINISDYTEKIVSDSAIELNHKSRNQEVFHGSNLTSFNDSFGLPEDKNQASKEYKDLNSSENISKLSPDFDLATEIEQTKETFWECKSCSFNKNKEHMQFCSVCLFDKQSQIDSENKNMDKISVTEDKILIEKENFNIEGNSDKWSCNQCSFKNDKTDLLCSLCYANNPYENTSHDVEDTWNCSKCKMKNPFDRYRCHQCDGLAGFFDKWVCEKCSFFNEKLDRNCYVCDLVNSNLIKCKKCEKNDVIEQDNEFCTSCIKENNYRGYGTSTPVNDISSNTSSRNEQDGKYSKNRIPIEEASNKITGKDSKLKQFHWYCINKKCSAINFSMAKYCSKCFVKNECASSNSFFIVLKNDKEVKMCRNCESVYVTSYCHCHKMMVTQV 1910 MNLENILNTDLRYKIIFYLKDVLKSSISKINNVDEFIKFFFKDFKCTDELK+LDEEVLYVNLAASKAISQLAWNAYQNNGLYKDCHINAQYLEKIYFIMGN NLYTNYLDKFKLGTEFLENVLIEMLSRYIIIHCILYYKEIDNLMFKSCIYCDCVVIGDICSVCEGNSFVLKDKSGDPMTFDFPFITDNVTDLKNQDLSSSSSNPTDCLESVSDSIKTKDNDELNSTINISDYTEKIVSDSAIELNHKSRNQEVFHGSNLTSFNDSFGLPEDKNQASKEYKDLNSSENISKLSPDFDLATEIEQTKETFWECKSCSFNKNKEHMQFCSVCLFDKQSQIDSENKNMDKISVTEDKILIEKENFNIEGNSDKWSCNQCSFKNDKTDLLCSLCYANNPYEN SHDVEDTWNCSKCKMKNPFDRYRCHQCDGLAGFFDKWVCEKCSFFNEKLDRNCYVCDLVNSNLIKCKKCEKNDVIEQDNEFCTSCIKEN+YRGYGT TPVNDISSN SSRNEQDGKYSKNRIPIEEASNKITGKDSKLKQFHWYCINKKCSAINFSMAKYCSKCFVKNECASSNSFFIVLKNDKEVKMCRNCESVYVTSYCHCHKMMVTQV Sbjct: 1 MNLENILNTDLRYKIIFYLKDVLKSSISKINNVDEFIKFFFKDFKCTDELKKLDEEVLYVNLAASKAISQLAWNAYQNNGLYKDCHINAQYLEKIYFIMGNCNLYTNYLDKFKLGTEFLENVLIEMLSRYIIIHCILYYKEIDNLMFKSCIYCDCVVIGDICSVCEGNSFVLKDKSGDPMTFDFPFITDNVTDLKNQDLSSSSSNPTDCLESVSDSIKTKDNDELNSTINISDYTEKIVSDSAIELNHKSRNQEVFHGSNLTSFNDSFGLPEDKNQASKEYKDLNSSENISKLSPDFDLATEIEQTKETFWECKSCSFNKNKEHMQFCSVCLFDKQSQIDSENKNMDKISVTEDKILIEKENFNIEGNSDKWSCNQCSFKNDKTDLLCSLCYANNPYENISHDVEDTWNCSKCKMKNPFDRYRCHQCDGLAGFFDKWVCEKCSFFNEKLDRNCYVCDLVNSNLIKCKKCEKNDVIEQDNEFCTSCIKENDYRGYGTPTPVNDISSNKSSRNEQDGKYSKNRIPIEEASNKITGKDSKLKQFHWYCINKKCSAINFSMAKYCSKCFVKNECASSNSFFIVLKNDKEVKMCRNCESVYVTSYCHCHKMMVTQV 611
BLAST of SMED30018355 vs. Planmine SMEST
Match: SMESG000022832.1 (SMESG000022832.1) HSP 1 Score: 134.42 bits (337), Expect = 1.009e-32 Identity = 95/301 (31.56%), Postives = 141/301 (46.84%), Query Frame = 3 Query: 1005 FWECKSCSFNKNKEHMQFCSVCLFDKQSQIDSENKNMDKISVTEDKILIEK-ENFNIEGNSDK------WSCNQCSFKNDKTDLLCSLCYA--NNPYENTSHDVEDTWNCSKCKMKNPFDRYRCHQCDGLAGFFDKWVCEKCSFFNEKLDRNCYVCDLVNSNLIKCKKCEK---NDVIEQDNEFCTSCIKENNYRGYGTST-----PVNDISSNTSSRNEQDGKYSKN----RIPIEEASNKITGKDSKLK----------------------QFHWYCINKKCSAINFSMAKYCSKCFVK 1778 FW+C CS+ NK C C +++ + +KIS E K L E EN + N+ + W C QCS+ N+K+ +C +C+ NP + E+TW C+KC N FD Y+CH+C +A F DKWVC +CSF+N+KL C VCD+ N +LIKC+KC K N Q+N+ C +C Y + P S + +N D K N + + + D+K K + W+C+N+ C ++NF+ K+C KC VK Sbjct: 290 FWQCAKCSY-INKTSAVTCETCGDTARNKRKANELQANKIS--EMKTLFEPGENAPVPNNASRIDNYNTWQCTQCSYVNEKSTSVCEICFNIDRNPGKEAEGIPEETWRCNKCGNNNSFDVYKCHKCREIAEFADKWVCGQCSFYNDKLSPRCGVCDMDNPHLIKCRKCRKGFVNAPNNQNNDICGACKVSQKTDYYSLPSNNAIKPSPSPGSGGAKKNINDRKTGNNLSLQNANVTQPALSSGSGDTKRKSCKNCRKELQPNSNNNWCITCEKMKWFCLNEACDSVNFN-KKFCKKCQVK 586
BLAST of SMED30018355 vs. Planmine SMEST
Match: SMESG000022828.1 (SMESG000022828.1) HSP 1 Score: 131.724 bits (330), Expect = 1.494e-31 Identity = 94/300 (31.33%), Postives = 138/300 (46.00%), Query Frame = 3 Query: 1008 WECKSCSFNKNKEHMQFCSVCLFDKQSQIDSENKNMDKISVTEDKILIEK-ENFNIEGNSDK------WSCNQCSFKNDKTDLLCSLCYA--NNPYENTSHDVEDTWNCSKCKMKNPFDRYRCHQCDGLAGFFDKWVCEKCSFFNEKLDRNCYVCDLVNSNLIKCKKCEK---NDVIEQDNEFCTSCIKENNYRGYGTST-----PVNDISSNTSSRNEQDGKYSKN----RIPIEEASNKITGKDSKLK----------------------QFHWYCINKKCSAINFSMAKYCSKCFVK 1778 WEC CS+ NK C C +++ + +KIS E K L E EN + N+ + W C QCS+ N+K+ +C +C+ NP + E+TW C+KC N FD Y+C +C G+A F DKWVC +CSF+N+KL C VCD+ N LIKC+KC K N Q+N+ C +C Y P S + +N D K N + + + D+K K + W+C+N+ C ++NF + ++C KC VK Sbjct: 466 WECAKCSY-INKISAVTCETCGDTARNKRKANELQANKIS--EMKTLFEPAENAPVPNNASRIDNDNTWQCTQCSYVNEKSTSVCEICFNIDRNPGKEAEGIPEETWRCNKCGNNNSFDVYKCQKCRGIAEFADKWVCGQCSFYNDKLSPRCGVCDMDNPRLIKCRKCRKGFVNAPNNQNNDICGACEISQKTDYYSLPIRIAIKPSPSPGSGGAKKNINDRKTGNNLSLQNANVTQPALSPGSGDTKRKSCKHCRKELQPNSNNNWCITCEKMKWFCLNEACDSVNFKV-EFCKKCQVK 761 HSP 2 Score: 68.1662 bits (165), Expect = 1.502e-11 Identity = 135/595 (22.69%), Postives = 224/595 (37.65%), Query Frame = 3 Query: 132 LKDVLKSSISKINNVDEXXXXXXXXXXCTDELKELDEEVLYVNLAASKAISQLAWNAY-QNNGLY-KDCHINA--------QYLEKIYFIMGNSNLYTNYLDKFKLGTEFLENVLIEMLSRYIIIHCILYYKEI-----DNLMFKSCIYCDCVVIGDICSVCEGN---------SF----VLKDKSGDPMTFDF---------------PFITDNVTDLKNQDLSSSSSNP--TDCLESVSDSIKTKDNDELNSTINISDYTEKIVSDSAI------------ELNHKSRNQEVFHGSNLTSF---------NDSFGLPEDKNQASKEYKDLNSSENISKLSPDFDLATEIEQTKETFWECKSCSFNKNKEHMQFCSVCLFDKQSQIDSENKNMDKISVTEDKILIEKENFNIEGNSDK------WSCNQCSFKNDKTDLLCSLCY---ANNPYENTS--------HDVEDTWNCSKCKMKNPFDRYRCHQCDGLA------------------GFFDK------------------WVCEKCSFFNEKLDRNCYVCDLVNSNLIKCKKCEKNDVIEQDNEFCTSCIKENNYRGY 1559 LK+ ++ IS IN +D F + D + LY L +K I+QL N Y +NN LY K C N +Y+EKI + +Y+D E+ L+E+++ Y+II+ +L +E DN++ CIYCD ++ IC VC+ SF K+KS + T++F NV + K +S + N T ++ S+KT D LN T ++ +S ++N+ + +Q + S D FG +K ++K + S+ N+S L+ + + + W C CS+ ++ + D+ ++E+ +K+ ++ I + EN N+++ WSC QCSFKN K+ C C N E S + D+W C+KC N C C A F+ W C +CS+ NEK C +C ++ N K + + I ++ C C N++ Y Sbjct: 22 LKEKIRQKISCINQIDYFPVEVQFKLSKDQRYQNFDMDDLYKYLMNTKRIAQLYLNVYNKNNSLYFKKCLANEVKMNMPFDKYMEKI------PKMNDSYID---------ESQLVEIIAIYVIIYSLLLNQEKILDKDDNMV---CIYCDNLLGDGICEVCDDTRDYSTKKNISFEKPDKKKEKSQNLQTYNFESKQTIEEIDWENMDKITKSNVKENKRNGKASKAYNIKYTGEMKRDQPSVKTTDYYSLNETTCEDQRADRFGKESKTNNIKYKDEKKKHKINNDNSDQPSVKTPDCYSLYERTCEDQRADGFGNKSNKTISAKTV--IASNTNLSTLANTKSIVCDNK------WACSKCSYENETSDVKCVTCSHTDRNGGKETES-GSNKLPESQS-ITVTHENAPTLNNTNRIEDGNYWSCTQCSFKNKKSTFGCVTCGYTDRNRGKETKSRSDKLLEMQNSVDSWECAKCSYINKISAVTCETCGDTARNKRKANELQANKISEMKTLFEPAENAPVPNNASRIDNDNTWQCTQCSYVNEKSTSVCEICFNIDRNPGK-----EAEGIPEETWRCNKCGNNNSFDVY 583
BLAST of SMED30018355 vs. Planmine SMEST
Match: SMESG000022823.1 (SMESG000022823.1) HSP 1 Score: 58.151 bits (139), Expect = 1.543e-8 Identity = 104/462 (22.51%), Postives = 177/462 (38.31%), Query Frame = 3 Query: 219 DELKELDEEVLYVNLAASKAISQLAWNAYQNNGLYKDCHINAQYLEKIYFIMGNSNLYTNYLDKFKLGTEFLENVLIEMLSRYIIIHCILYYKEIDNLMFKSCIYCDCVVIGDICSVCEGNSFVLKDKSGDPMTFDFPFITDNVTDLKNQDLSSSSSNPTDCLESVSDSIKTKDNDELNSTINISDYTEKIVSDSAIELNHKSRNQEVFHGSNLTSFNDSFGLPEDKNQASKEYKDLN-SSENISKLSPDFDLATEIEQTKETFWECKSCSFNKNKEHMQFCSVCLFDK--QSQIDSENKNMDKISVTEDKILIEKEN----FNIEGNSDKWSCNQCSFKNDKTDLLCSLCYANNPYENTSHD---VE--------------DTWNCSKCKMKNPFDRYRCHQCDGLAGFFDKWVCEKCSFFNEKLDRNCYVCDLVNSNLIKCKKCEKNDVIEQDNEFCTSC 1532 DE + LY+ L + +Q+ N Y Y+ C K+ I + N N + E ++++E + ++ H ++Y +E+ + K+ D ++IG IC CE M D NV + D++ ++N + L V K + + + ++ D LN + + ++ + S+ + + N+ K ++L + ENI K S DF + W+C C + +FC CL +K +Q + N++K K +EK N + E S S +C ++T+ C N+ N +H VE D W C KC M N +D + C C W CE+C N+ C+ C N N+ CK+C K+ I D FC +C Sbjct: 9 DEYNNYSTDNLYLELRNCRKKAQILLNLYHCPKEYEKC--------KLLDIGSHLNNTNNKPFGIENVQEINSDIIVEAIGEFVKYHHVIYERELQVELDKNKEITD-LLIGSICCFCE-------------MRLDRGQSYCNVCEALKDDMTKYATNHYETLMLVKTQQPKKTSFIYQNVDKVPNF------DPITHLNGANYDYKITYKPEKNSYENINEIQNAANRKEKSTENLKINEENIVKTSKDF-----------SEWKCSKCGL---LNYDEFCMACLNEKVITNQKYGQEINLEKSGA---KNSVEKRNTTSTYRYENVSSIES-EKCVICRNETNCNCKSNTKNSAITNENHKETLVENWENNDASTTNINSDQWKCDKCGMLN-YDDF-CSACLNERRTIKLWKCERCKKLNDFFIEKCFSCGKTNENIQLCKQC-KSIKIAADRRFCDTC 421 The following BLAST results are available for this feature:
BLAST of SMED30018355 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of SMED30018355 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of SMED30018355 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of SMED30018355 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of SMED30018355 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of SMED30018355 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of SMED30018355 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of SMED30018355 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30018355 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of SMED30018355 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of SMED30018355 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30018355 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of SMED30018355 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of SMED30018355 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 4
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30018355 ID=SMED30018355|Name=SMED30018355|organism=Schmidtea mediterranea sexual|type=transcript|length=1961bpback to top protein sequence of SMED30018355-orf-1 >SMED30018355-orf-1 ID=SMED30018355-orf-1|Name=SMED30018355-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=612bp MNLENILNTDLRYKIIFYLKDVLKSSISKINNVDEFIKFFFKDFKCTDELback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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