Dynein light chain

Overview
NameDynein light chain
Smed IDSMED30018297
Length (bp)417
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Dynein light chain (SMED30018297) t-SNE clustered cells

Violin plots show distribution of expression levels for Dynein light chain (SMED30018297) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Dynein light chain (SMED30018297) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Dynein light chain (SMED30018297) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30018297

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 13

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30018297SMESG000019341.1 dd_Smed_v4_177_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
protonephridiaSMED30018297SMESG000019341.1 dd_Smed_v4_177_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30018297SMESG000019341.1 dd_Smed_v4_177_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30018297SMESG000019341.1 dd_Smed_v4_177_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30018297SMESG000019341.1 dd_Smed_v4_177_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30018297SMESG000019341.1 dd_Smed_v4_177_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30018297SMESG000019341.1 Contig51224newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30018297SMESG000019341.1 Contig51224uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
head regionSMED30018297SMESG000019341.1 dd_Smed_v6_177_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
body wall musculatureSMED30018297SMESG000019341.1 dd_Smed_v4_177_0_1dd_Smed_v4PMID:30471994
Scimone et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30018297SMESG000019341.1 dd_Smed_v6_177_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Category 3 cellSMED30018297SMESG000019341.1 dd_Smed_v6_177_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30018297SMESG000019341.1 dd_Smed_v4_177_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Dynein light chain vs. Ensembl Human
Match: DYNLL1 (dynein light chain LC8-type 1 [Source:HGNC Symbol;Acc:HGNC:15476])

HSP 1 Score: 64.3142 bits (155), Expect = 6.605e-14
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+++++    +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEEMQQDSVECATQALEKYNIEKD---IAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Human
Match: DYNLL1 (dynein light chain LC8-type 1 [Source:HGNC Symbol;Acc:HGNC:15476])

HSP 1 Score: 64.3142 bits (155), Expect = 6.605e-14
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+++++    +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEEMQQDSVECATQALEKYNIEKD---IAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Human
Match: DYNLL1 (dynein light chain LC8-type 1 [Source:HGNC Symbol;Acc:HGNC:15476])

HSP 1 Score: 64.3142 bits (155), Expect = 6.605e-14
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+++++    +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEEMQQDSVECATQALEKYNIEKD---IAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Human
Match: DYNLL1 (dynein light chain LC8-type 1 [Source:HGNC Symbol;Acc:HGNC:15476])

HSP 1 Score: 64.3142 bits (155), Expect = 6.605e-14
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+++++    +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEEMQQDSVECATQALEKYNIEKD---IAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Human
Match: DYNLL1 (dynein light chain LC8-type 1 [Source:HGNC Symbol;Acc:HGNC:15476])

HSP 1 Score: 64.3142 bits (155), Expect = 6.605e-14
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+++++    +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEEMQQDSVECATQALEKYNIEKD---IAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Celegans
Match: dlc-1 (Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799])

HSP 1 Score: 66.2402 bits (160), Expect = 4.543e-15
Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM + M+++AI+   +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSDDMQQDAIDCATQALEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Celegans
Match: dlc-1 (Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799])

HSP 1 Score: 66.2402 bits (160), Expect = 4.543e-15
Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM + M+++AI+   +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSDDMQQDAIDCATQALEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Celegans
Match: dlc-1 (Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799])

HSP 1 Score: 66.2402 bits (160), Expect = 4.543e-15
Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM + M+++AI+   +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSDDMQQDAIDCATQALEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Celegans
Match: dlc-5 (Dynein Light Chain [Source:UniProtKB/TrEMBL;Acc:Q65XS9])

HSP 1 Score: 48.9062 bits (115), Expect = 1.122e-7
Identity = 27/90 (30.00%), Postives = 40/90 (44.44%), Query Frame = 1 
Query:   79 EFNVDDSKTDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
            E   D   + M   M +EA +   +++      +    I   ++  FD  + P WHC+ GK FGS VT E  + IY   G    ML+K  
Sbjct:   55 EIVADVQHSRMPRHMEQEACSLAAKSIMTYHLEHD---IARHLKMAFDREYGPDWHCICGKHFGSFVTFEPDSFIYFRIGTIAFMLFKTS 141
[Close]
BLAST of Dynein light chain vs. Ensembl Celegans
Match: dlc-2 (Probable dynein light chain 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q21557])

HSP 1 Score: 42.3578 bits (98), Expect = 5.703e-6
Identity = 26/90 (28.89%), Postives = 48/90 (53.33%), Query Frame = 1 
Query:   79 EFNVDDSKTDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
            E  ++  +TDM +  R+  I+ + EA   +   N +K++ A ++++ D+     WH + GK FGS V++E G  I        +M++K G
Sbjct:    3 EEKIEVKETDMEDPQRDMVISVVREA---QRLYNIDKDVAAFVKEELDKKFGATWHVICGKCFGSRVSYEMGHFILLKCNKVNVMIYKCG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Fly
Match: ctp (gene:FBgn0011760 transcript:FBtr0070706)

HSP 1 Score: 65.4698 bits (158), Expect = 1.021e-14
Identity = 30/82 (36.59%), Postives = 49/82 (59.76%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+++A++   +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEEMQQDAVDCATQALEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Fly
Match: ctp (gene:FBgn0011760 transcript:FBtr0070704)

HSP 1 Score: 65.4698 bits (158), Expect = 1.021e-14
Identity = 30/82 (36.59%), Postives = 49/82 (59.76%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+++A++   +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEEMQQDAVDCATQALEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Fly
Match: ctp (gene:FBgn0011760 transcript:FBtr0307065)

HSP 1 Score: 65.4698 bits (158), Expect = 1.021e-14
Identity = 30/82 (36.59%), Postives = 49/82 (59.76%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+++A++   +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEEMQQDAVDCATQALEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Fly
Match: ctp (gene:FBgn0011760 transcript:FBtr0070707)

HSP 1 Score: 65.4698 bits (158), Expect = 1.021e-14
Identity = 30/82 (36.59%), Postives = 49/82 (59.76%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+++A++   +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEEMQQDAVDCATQALEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Fly
Match: Cdlc2 (gene:FBgn0026141 transcript:FBtr0077924)

HSP 1 Score: 65.0846 bits (157), Expect = 1.658e-14
Identity = 30/82 (36.59%), Postives = 49/82 (59.76%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+++A++   +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEEMQQDAVDCATQALEKYNIEKD---IAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Zebrafish
Match: dynll1 (dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961])

HSP 1 Score: 65.0846 bits (157), Expect = 1.998e-14
Identity = 30/82 (36.59%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+++A+    +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEEMQQDAVECATQALEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Zebrafish
Match: dynll1 (dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961])

HSP 1 Score: 65.0846 bits (157), Expect = 1.998e-14
Identity = 30/82 (36.59%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+++A+    +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEEMQQDAVECATQALEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Zebrafish
Match: dynll2a (dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11])

HSP 1 Score: 63.929 bits (154), Expect = 6.326e-14
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM   M+++A++   +A++          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEDMQQDAVDCATQAMEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Zebrafish
Match: dynll2b (dynein, light chain, LC8-type 2b [Source:ZFIN;Acc:ZDB-GENE-050320-132])

HSP 1 Score: 63.929 bits (154), Expect = 6.326e-14
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM   M+++A++   +A++          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEDMQQDAVDCATQAMEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Zebrafish
Match: dynll2a (dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11])

HSP 1 Score: 63.929 bits (154), Expect = 6.326e-14
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM   M+++A++   +A++          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEDMQQDAVDCATQAMEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Xenopus
Match: dynll1 (dynein light chain LC8-type 1 [Source:NCBI gene;Acc:448652])

HSP 1 Score: 65.0846 bits (157), Expect = 2.698e-14
Identity = 30/82 (36.59%), Postives = 49/82 (59.76%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+++A++   +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEEMQQDAVDCATQALEKFNIEKD---IAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Xenopus
Match: dynll2 (dynein light chain LC8-type 2 [Source:NCBI gene;Acc:100038056])

HSP 1 Score: 63.929 bits (154), Expect = 8.271e-14
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM   M+++A++   +A++          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEDMQQDAVDCATQAMEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Mouse
Match: Dynll1 (dynein light chain LC8-type 1 [Source:MGI Symbol;Acc:MGI:1861457])

HSP 1 Score: 64.3142 bits (155), Expect = 4.535e-14
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+++++    +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEEMQQDSVECATQALEKYNIEKD---IAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Mouse
Match: Dynll1 (dynein light chain LC8-type 1 [Source:MGI Symbol;Acc:MGI:1861457])

HSP 1 Score: 64.3142 bits (155), Expect = 4.535e-14
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+++++    +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEEMQQDSVECATQALEKYNIEKD---IAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Mouse
Match: Dynll2 (dynein light chain LC8-type 2 [Source:MGI Symbol;Acc:MGI:1915347])

HSP 1 Score: 63.929 bits (154), Expect = 6.264e-14
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM   M+++A++   +A++          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEDMQQDAVDCATQAMEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Mouse
Match: Dynll2 (dynein light chain LC8-type 2 [Source:MGI Symbol;Acc:MGI:1915347])

HSP 1 Score: 63.929 bits (154), Expect = 6.264e-14
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM   M+++A++   +A++          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEDMQQDAVDCATQAMEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Mouse
Match: Dynll2 (dynein light chain LC8-type 2 [Source:MGI Symbol;Acc:MGI:1915347])

HSP 1 Score: 63.929 bits (154), Expect = 6.264e-14
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM   M+++A++   +A++          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEDMQQDAVDCATQAMEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. UniProt/SwissProt
Match: sp|Q39580|DYL1_CHLRE (Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas reinhardtii OX=3055 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 4.692e-14
Identity = 31/82 (37.80%), Postives = 47/82 (57.32%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+ +A++   +AL+          I A I+K+FD  H P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   13 ADMSEEMQADAVDCATQALEKYNIEKD---IAAYIKKEFDRKHNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 91
[Close]
BLAST of Dynein light chain vs. UniProt/SwissProt
Match: sp|Q22799|DYL1_CAEEL (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.779e-14
Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM + M+++AI+   +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSDDMQQDAIDCATQALEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. UniProt/SwissProt
Match: sp|Q94758|DYL1_SCHMA (Dynein light chain OS=Schistosoma mansoni OX=6183 GN=DLC PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.170e-14
Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+E+AI+    A+   +       I A I+K FD  ++P WHC++G+ FGS VTHE    IY    D   +L+K+G
Sbjct:   11 ADMSEEMQEDAIHIAAGAIDKHDLEKD---IAANIKKDFDRKYHPTWHCIVGRHFGSYVTHETHNFIYFYLDDRAFLLFKSG 89
[Close]
BLAST of Dynein light chain vs. UniProt/SwissProt
Match: sp|Q24117|DYL1_DROME (Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.023e-13
Identity = 30/82 (36.59%), Postives = 49/82 (59.76%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+++A++   +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEEMQQDAVDCATQALEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. UniProt/SwissProt
Match: sp|Q9UR05|DYL1_SCHPO (Dynein light chain 1, cytoplasmic OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dlc2 PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.335e-13
Identity = 30/82 (36.59%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M++EAI+  ++A++          I A I+++FD+   P WHC++G+ FGS VTHE    IY   G    +L+K+G
Sbjct:    7 VDMSEKMQQEAIHAAVQAMEKFTIEKD---IAAFIKREFDKKFSPTWHCIVGRNFGSFVTHESRHFIYFYLGTVAFLLFKSG 85
[Close]
BLAST of Dynein light chain vs. TrEMBL
Match: A0A183A9F8 (Dynein light chain OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS3593 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.055e-14
Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM N+M+E A++T   A+   +       I A I+K+FD+ + P WHCV+GK FGS VTHE    IY    DY  +L+K+G
Sbjct:   11 ADMSNEMQEVAVHTAASAMDKYQVEKD---IAAYIKKEFDQKYNPTWHCVVGKSFGSYVTHETQNFIYFYLQDYAFLLFKSG 89
[Close]
BLAST of Dynein light chain vs. TrEMBL
Match: A0A504YPY2 (Dynein light chain OS=Fasciola gigantica OX=46835 GN=FGIG_07349 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.268e-14
Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM N+M+E+A++T  +A+   +       I AQI+K+FD  + P WHC++GK FGS VTHE    IY    D   +L+K+G
Sbjct:   11 ADMSNEMQEDAVHTAAQAMDKYQVEKD---IAAQIKKEFDRKYNPTWHCIVGKNFGSYVTHETQNFIYFYLQDRAFLLFKSG 89
[Close]
BLAST of Dynein light chain vs. TrEMBL
Match: A0A2H1C8L7 (Dynein light chain OS=Fasciola hepatica OX=6192 GN=D915_006133 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.268e-14
Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM N+M+E+A++T  +A+   +       I AQI+K+FD  + P WHC++GK FGS VTHE    IY    D   +L+K+G
Sbjct:   11 ADMSNEMQEDAVHTAAQAMDKYQVEKD---IAAQIKKEFDRKYNPTWHCIVGKNFGSYVTHETQNFIYFYLQDRAFLLFKSG 89
[Close]
BLAST of Dynein light chain vs. TrEMBL
Match: A0A090M3C5 (Dynein light chain OS=Ostreococcus tauri OX=70448 GN=OT_ostta01g00560 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.346e-14
Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM ++++++A+ T MEA++          I A ++K+FD  H P WHC++G+ FGS VTHE G+ IY    +   +L+KAG
Sbjct:   13 ADMPDEVQDDAVATSMEAMEKFNVEKD---IAAYVKKEFDRKHGPTWHCIVGRNFGSYVTHESGSFIYYYVANVAFLLFKAG 91
[Close]
BLAST of Dynein light chain vs. TrEMBL
Match: A0A183A9F7 (Dynein light chain OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS3592 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.257e-13
Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM N+++EEA++    AL   +       I A ++K+FD  + P WHCV+GK FGS VTHE G  IY    D   +L+K+G
Sbjct:   11 ADMANEVQEEAVHIAAYALDKYQVEKD---IAAHLKKEFDRKYNPTWHCVVGKNFGSYVTHETGNFIYFYLQDRAFLLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Cavefish
Match: ENSAMXT00000047143.1 (dynein light chain 2, cytoplasmic [Source:NCBI gene;Acc:103041528])

HSP 1 Score: 63.929 bits (154), Expect = 5.361e-14
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM   M+++A++   +A++          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEDMQQDAVDCATQAMEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Cavefish
Match: dynll2b (dynein light chain 2, cytoplasmic [Source:NCBI gene;Acc:103041528])

HSP 1 Score: 63.929 bits (154), Expect = 5.361e-14
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM   M+++A++   +A++          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEDMQQDAVDCATQAMEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Cavefish
Match: dynll1 (dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961])

HSP 1 Score: 56.6102 bits (135), Expect = 6.159e-11
Identity = 29/80 (36.25%), Postives = 44/80 (55.00%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDY-GLMLW 339
             DM  +M+++A+    +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   G  +W
Sbjct:   11 ADMSEEMQQDAVECATQALEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQRNGWAVW 87
[Close]
BLAST of Dynein light chain vs. Ensembl Yeast
Match: DYN2 (Cytoplasmic light chain dynein, microtubule motor protein; required for intracellular transport and cell division; involved in mitotic spindle positioning; forms complex with dynein intermediate chain Pac11p that promotes Dyn1p homodimerization, potentiates motor processivity; Dyn2p-Pac11p complex important for interaction of dynein motor complex with dynactin complex; acts as molecular glue to dimerize, stabilize Nup82-Nsp1-Nup159 complex module of cytoplasmic pore filaments [Source:SGD;Acc:S000002832])

HSP 1 Score: 48.9062 bits (115), Expect = 4.528e-9
Identity = 23/82 (28.05%), Postives = 43/82 (52.44%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
            +D+ ++++E+ +    +AL   +       I   ++K+ D  +   WH ++GK FGS VTHEKG  +Y   G    +++K  
Sbjct:   14 SDITDKLKEDILTISKDALDKYQLERD---IAGTVKKQLDVKYGNTWHVIVGKNFGSYVTHEKGHFVYFYIGPLAFLVFKTA 92
[Close]
BLAST of Dynein light chain vs. Ensembl Nematostella
Match: EDO44582 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RVI5])

HSP 1 Score: 63.1586 bits (152), Expect = 3.177e-14
Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM   M+ +AI    +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMAEDMQTDAIECATQALEKFNIEKD---IAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Medaka
Match: DYNLL2 (dynein light chain 2, cytoplasmic [Source:NCBI gene;Acc:101174042])

HSP 1 Score: 67.3958 bits (163), Expect = 2.264e-15
Identity = 29/82 (35.37%), Postives = 51/82 (62.20%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM ++M+++A++  M+A++          I A ++K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSDEMQQDAVDCAMQAMEKYNIEKD---IAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Medaka
Match: ENSORLT00000005747.2 (dynein light chain 2, cytoplasmic [Source:NCBI gene;Acc:101162462])

HSP 1 Score: 64.6994 bits (156), Expect = 2.534e-14
Identity = 29/82 (35.37%), Postives = 49/82 (59.76%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM  +M+++A++   +A++          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEEMQQDAVDCATQAMEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Medaka
Match: dynll1 (dynein light chain 2, cytoplasmic [Source:NCBI gene;Acc:101171417])

HSP 1 Score: 64.3142 bits (155), Expect = 3.655e-14
Identity = 30/82 (36.59%), Postives = 47/82 (57.32%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM   M+++A+    +AL+          I A I+K+FD+ + P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMSEDMQQDAVECATQALEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Planmine SMEST
Match: SMESG000019341.1 (SMESG000019341.1)

HSP 1 Score: 169.088 bits (427), Expect = 1.414e-55
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1 
Query:   76 MEFNVDDSKTDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAGQ 351
            MEFNVDDSKTDMGNQMREEAINTIMEALQNEENNNQEKNICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAGQ
Sbjct:    1 MEFNVDDSKTDMGNQMREEAINTIMEALQNEENNNQEKNICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAGQ 92
[Close]
BLAST of Dynein light chain vs. Planmine SMEST
Match: SMESG000003270.1 (SMESG000003270.1)

HSP 1 Score: 128.642 bits (322), Expect = 1.361e-39
Identity = 67/92 (72.83%), Postives = 77/92 (83.70%), Query Frame = 1 
Query:   76 MEFNVDDSKTDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAGQ 351
            MEF VD+SKTDM + MR EA+  I  A  NE+NN QEKNICA+IRKKFD LH+PQWHC+MGKKFGSSV+HEKGTL+YG  GD+GLMLWKAG 
Sbjct:    1 MEFIVDESKTDMTDSMRIEALEAIRSAFYNEDNNGQEKNICAEIRKKFDALHFPQWHCIMGKKFGSSVSHEKGTLLYGACGDHGLMLWKAGN 92
[Close]
BLAST of Dynein light chain vs. Planmine SMEST
Match: SMESG000043382.1 (SMESG000043382.1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.557e-20
Identity = 39/91 (42.86%), Postives = 62/91 (68.13%), Query Frame = 1 
Query:   76 MEFNVDDSKTDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
            M + ++  +TDM   ++  A   I +A+ N +N N E+NI  +IR+K +    PQW C++GKK+G+S+THEK +L+Y TT DYG++L+K G
Sbjct:    1 MIYQIEIEQTDMPENVKNAAAKIIEQAVSNPKNQNVERNIALEIREKMNLDFKPQWQCIVGKKYGTSITHEKESLMYATTNDYGILLFKGG 91
[Close]
BLAST of Dynein light chain vs. Planmine SMEST
Match: SMESG000005286.1 (SMESG000005286.1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.900e-15
Identity = 32/82 (39.02%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM ++M+E AIN   +A++          I A I+K+FD+   P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMTDEMQEAAINYATQAMEKFNIEKD---IAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Planmine SMEST
Match: SMESG000073811.1 (SMESG000073811.1)

HSP 1 Score: 66.2402 bits (160), Expect = 4.231e-15
Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 1 
Query:  103 TDMGNQMREEAINTIMEALXXXXXXXXXXXICAQIRKKFDELHYPQWHCVMGKKFGSSVTHEKGTLIYGTTGDYGLMLWKAG 348
             DM   M+E A+N    A++          I A I+K+FD+L+ P WHC++G+ FGS VTHE    IY   G   ++L+K+G
Sbjct:   11 ADMQEDMQEAAVNCATTAMEKYNIEKD---IAAFIKKEFDKLYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
The following BLAST results are available for this feature:
BLAST of Dynein light chain vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
DYNLL16.605e-1435.37dynein light chain LC8-type 1 [Source:HGNC Symbol;... [more]
DYNLL16.605e-1435.37dynein light chain LC8-type 1 [Source:HGNC Symbol;... [more]
DYNLL16.605e-1435.37dynein light chain LC8-type 1 [Source:HGNC Symbol;... [more]
DYNLL16.605e-1435.37dynein light chain LC8-type 1 [Source:HGNC Symbol;... [more]
DYNLL16.605e-1435.37dynein light chain LC8-type 1 [Source:HGNC Symbol;... [more]
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BLAST of Dynein light chain vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dlc-14.543e-1537.80Dynein light chain 1, cytoplasmic [Source:UniProt... [more]
dlc-14.543e-1537.80Dynein light chain 1, cytoplasmic [Source:UniProt... [more]
dlc-14.543e-1537.80Dynein light chain 1, cytoplasmic [Source:UniProt... [more]
dlc-51.122e-730.00Dynein Light Chain [Source:UniProtKB/TrEMBL;Acc:Q... [more]
dlc-25.703e-628.89Probable dynein light chain 2, cytoplasmic [Sourc... [more]
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BLAST of Dynein light chain vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ctp1.021e-1436.59gene:FBgn0011760 transcript:FBtr0070706[more]
ctp1.021e-1436.59gene:FBgn0011760 transcript:FBtr0070704[more]
ctp1.021e-1436.59gene:FBgn0011760 transcript:FBtr0307065[more]
ctp1.021e-1436.59gene:FBgn0011760 transcript:FBtr0070707[more]
Cdlc21.658e-1436.59gene:FBgn0026141 transcript:FBtr0077924[more]
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BLAST of Dynein light chain vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dynll11.998e-1436.59dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:Z... [more]
dynll11.998e-1436.59dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:Z... [more]
dynll2a6.326e-1435.37dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:... [more]
dynll2b6.326e-1435.37dynein, light chain, LC8-type 2b [Source:ZFIN;Acc:... [more]
dynll2a6.326e-1435.37dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:... [more]
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BLAST of Dynein light chain vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 2
Match NameE-valueIdentityDescription
dynll12.698e-1436.59dynein light chain LC8-type 1 [Source:NCBI gene;Ac... [more]
dynll28.271e-1435.37dynein light chain LC8-type 2 [Source:NCBI gene;Ac... [more]
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BLAST of Dynein light chain vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Dynll14.535e-1435.37dynein light chain LC8-type 1 [Source:MGI Symbol;A... [more]
Dynll14.535e-1435.37dynein light chain LC8-type 1 [Source:MGI Symbol;A... [more]
Dynll26.264e-1435.37dynein light chain LC8-type 2 [Source:MGI Symbol;A... [more]
Dynll26.264e-1435.37dynein light chain LC8-type 2 [Source:MGI Symbol;A... [more]
Dynll26.264e-1435.37dynein light chain LC8-type 2 [Source:MGI Symbol;A... [more]
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BLAST of Dynein light chain vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q39580|DYL1_CHLRE4.692e-1437.80Dynein 8 kDa light chain, flagellar outer arm OS=C... [more]
sp|Q22799|DYL1_CAEEL5.779e-1437.80Dynein light chain 1, cytoplasmic OS=Caenorhabditi... [more]
sp|Q94758|DYL1_SCHMA7.170e-1437.80Dynein light chain OS=Schistosoma mansoni OX=6183 ... [more]
sp|Q24117|DYL1_DROME1.023e-1336.59Dynein light chain 1, cytoplasmic OS=Drosophila me... [more]
sp|Q9UR05|DYL1_SCHPO1.335e-1336.59Dynein light chain 1, cytoplasmic OS=Schizosacchar... [more]
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BLAST of Dynein light chain vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A183A9F81.055e-1442.68Dynein light chain OS=Echinostoma caproni OX=27848... [more]
A0A504YPY21.268e-1441.46Dynein light chain OS=Fasciola gigantica OX=46835 ... [more]
A0A2H1C8L71.268e-1441.46Dynein light chain OS=Fasciola hepatica OX=6192 GN... [more]
A0A090M3C52.346e-1439.02Dynein light chain OS=Ostreococcus tauri OX=70448 ... [more]
A0A183A9F71.257e-1341.46Dynein light chain OS=Echinostoma caproni OX=27848... [more]
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BLAST of Dynein light chain vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ENSAMXT00000047143.15.361e-1435.37dynein light chain 2, cytoplasmic [Source:NCBI gen... [more]
dynll2b5.361e-1435.37dynein light chain 2, cytoplasmic [Source:NCBI gen... [more]
dynll16.159e-1136.25dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:Z... [more]
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BLAST of Dynein light chain vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Dynein light chain vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
DYN24.528e-928.05Cytoplasmic light chain dynein, microtubule motor ... [more]
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BLAST of Dynein light chain vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO445823.177e-1437.80Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Dynein light chain vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 3
Match NameE-valueIdentityDescription
DYNLL22.264e-1535.37dynein light chain 2, cytoplasmic [Source:NCBI gen... [more]
ENSORLT00000005747.22.534e-1435.37dynein light chain 2, cytoplasmic [Source:NCBI gen... [more]
dynll13.655e-1436.59dynein light chain 2, cytoplasmic [Source:NCBI gen... [more]
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BLAST of Dynein light chain vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000019341.11.414e-55100.00SMESG000019341.1[more]
SMESG000003270.11.361e-3972.83SMESG000003270.1[more]
SMESG000043382.16.557e-2042.86SMESG000043382.1[more]
SMESG000005286.12.900e-1539.02SMESG000005286.1[more]
SMESG000073811.14.231e-1539.02SMESG000073811.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30018297 ID=SMED30018297|Name=Dynein light chain|organism=Schmidtea mediterranea sexual|type=transcript|length=417bp
ATGGATTTGTGTGGGGGGCGGTTATAAAACTATTTAAATCGAATATCAAC
ATCAGATTTCAATAATCATAGCAAAATGGAGTTTAATGTTGATGACAGTA
AAACCGATATGGGCAATCAAATGAGGGAGGAAGCCATCAATACTATCATG
GAGGCTTTACAAAATGAGGAAAACAATAATCAAGAGAAGAATATTTGTGC
TCAGATTCGCAAGAAGTTTGACGAATTACATTATCCTCAGTGGCATTGTG
TGATGGGAAAGAAATTCGGAAGTAGTGTAACCCATGAAAAGGGTACTTTG
ATTTACGGAACTACCGGAGATTACGGTTTGATGTTGTGGAAAGCCGGGCA
GTAAAAATGAACTTTAGTTCTTTTGATTGGGATATTAATTATACTAATAA
ATAGTTTTTCAATTTTT
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0003774motor activity
Vocabulary: cellular component
TermDefinition
GO:0005737cytoplasm
GO:0005856cytoskeleton
GO:0005874microtubule
GO:0030286dynein complex
GO:0005875microtubule associated complex
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000020protonephridia
PLANA:0000034epidermis
PLANA:0000035Category 3 cell
PLANA:0000240body wall musculature
PLANA:0000418head
PLANA:0002032epidermal cell
Vocabulary: INTERPRO
TermDefinition
IPR037177DLC_sf
IPR001372Dynein_light_chain_typ-1/2
IPR019763Dynein_light_1/2_CS
Vocabulary: biological process
TermDefinition
GO:0007017microtubule-based process
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 1..90
e-value: 9.3E-21
score: 85.0
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 9..89
e-value: 7.2E-25
score: 87.1
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 9..91
IPR037177Dynein light chain superfamilyGENE3DG3DSA:3.30.740.10coord: 8..91
e-value: 6.4E-25
score: 89.1
IPR037177Dynein light chain superfamilySUPERFAMILYSSF54648DLCcoord: 9..90
NoneNo IPR availablePANTHERPTHR11886:SF35DYNEIN LIGHT CHAIN 2, CYTOPLASMICcoord: 9..91
IPR019763Dynein light chain, type 1/2, conserved sitePROSITEPS01239DYNEIN_LIGHT_1coord: 57..71