MADS-box domain-containing protein

Overview
NameMADS-box domain-containing protein
Smed IDSMED30018122
Length (bp)1295
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of MADS-box domain-containing protein (SMED30018122) t-SNE clustered cells

Violin plots show distribution of expression levels for MADS-box domain-containing protein (SMED30018122) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of MADS-box domain-containing protein (SMED30018122) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for MADS-box domain-containing protein (SMED30018122) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30018122

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 11

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30018122h1SMcG0004252 Contig594GPL15192PMID:23079596
Forsthoefel et al., 2012
whole organism asexual adult colorimetric in situ hybridization evidence
gutSMED30018122h1SMcG0004252 Contig594GPL15192PMID:23079596
Forsthoefel et al., 2012
whole organism asexual adult colorimetric in situ hybridization evidence
intestinal phagocyteSMED30018122h1SMcG0004252 Contig594GPL15192PMID:23079596
Forsthoefel et al., 2012
FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
pharynxSMED30018122h1SMcG0015051 Contig594GPL15192PMID:23079596
Forsthoefel et al., 2012
whole organism asexual adult colorimetric in situ hybridization evidence
gutSMED30018122h1SMcG0015051 Contig594GPL15192PMID:23079596
Forsthoefel et al., 2012
whole organism asexual adult colorimetric in situ hybridization evidence
intestinal phagocyteSMED30018122h1SMcG0015051 Contig594GPL15192PMID:23079596
Forsthoefel et al., 2012
FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
intestinal phagocyteSMED30018122h1SMcG0015051 PL04024A2A08smed_ncbi_20240424PMID:23079596
Forsthoefel et al., 2012
FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
epidermisSMED30018122h1SMcG0015051 dd_Smed_v4_6536_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30018122h1SMcG0015051 dd_Smed_v4_6536_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30018122h1SMcG0015051 dd_Smed_v4_6536_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30018122h1SMcG0015051 dd_Smed_v4_6536_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017
whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of MADS-box domain-containing protein vs. Ensembl Human
Match: MEF2A (myocyte enhancer factor 2A [Source:HGNC Symbol;Acc:HGNC:6993])

HSP 1 Score: 56.225 bits (134), Expect = 9.608e-10
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Human
Match: MEF2C (myocyte enhancer factor 2C [Source:HGNC Symbol;Acc:HGNC:6996])

HSP 1 Score: 56.6102 bits (135), Expect = 1.126e-9
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Human
Match: MEF2A (myocyte enhancer factor 2A [Source:HGNC Symbol;Acc:HGNC:6993])

HSP 1 Score: 56.225 bits (134), Expect = 1.392e-9
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Human
Match: MEF2C (myocyte enhancer factor 2C [Source:HGNC Symbol;Acc:HGNC:6996])

HSP 1 Score: 56.6102 bits (135), Expect = 2.136e-9
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Human
Match: MEF2D (myocyte enhancer factor 2D [Source:HGNC Symbol;Acc:HGNC:6997])

HSP 1 Score: 56.225 bits (134), Expect = 4.349e-9
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Celegans
Match: mef-2 (Related to vertebrate MEF2 transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9U325])

HSP 1 Score: 58.9214 bits (141), Expect = 2.594e-9
Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I+D+R R  TF KR+ GL KKA EL+ LC   I++I+ N
Sbjct:    1 MGRKKIQITRIQDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIVFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Celegans
Match: unc-120 (pep chromosome:WBcel235:I:8460225:8463015:1 gene:WBGene00006844.1 transcript:D1081.2.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:unc-120)

HSP 1 Score: 48.521 bits (114), Expect = 4.789e-6
Identity = 22/59 (37.29%), Postives = 37/59 (62.71%), Query Frame = 2
Query:  110 GRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNKDL-VYKFSDP 283
            GR KI M +I +  +R +TF KR+ G+ KKA EL+ L G  + +++ ++   VY ++ P
Sbjct:   46 GRVKIKMEYINNKLRRYTTFSKRKTGIMKKAFELSTLTGTQVMLLVASETGHVYTYATP 104          
BLAST of MADS-box domain-containing protein vs. Ensembl Fly
Match: Mef2 (gene:FBgn0011656 transcript:FBtr0088446)

HSP 1 Score: 56.9954 bits (136), Expect = 2.089e-8
Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVII 247
            MGRKKI ++ I D+R R  TF+KR+ G+ KKA EL+ LC   I++II
Sbjct:    1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALII 47          
BLAST of MADS-box domain-containing protein vs. Ensembl Fly
Match: Mef2 (gene:FBgn0011656 transcript:FBtr0088444)

HSP 1 Score: 56.6102 bits (135), Expect = 2.262e-8
Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVII 247
            MGRKKI ++ I D+R R  TF+KR+ G+ KKA EL+ LC   I++II
Sbjct:    1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALII 47          
BLAST of MADS-box domain-containing protein vs. Ensembl Fly
Match: Mef2 (gene:FBgn0011656 transcript:FBtr0088443)

HSP 1 Score: 56.6102 bits (135), Expect = 2.349e-8
Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVII 247
            MGRKKI ++ I D+R R  TF+KR+ G+ KKA EL+ LC   I++II
Sbjct:    1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALII 47          
BLAST of MADS-box domain-containing protein vs. Ensembl Fly
Match: Mef2 (gene:FBgn0011656 transcript:FBtr0088445)

HSP 1 Score: 56.6102 bits (135), Expect = 2.382e-8
Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVII 247
            MGRKKI ++ I D+R R  TF+KR+ G+ KKA EL+ LC   I++II
Sbjct:    1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALII 47          
BLAST of MADS-box domain-containing protein vs. Ensembl Fly
Match: Mef2 (gene:FBgn0011656 transcript:FBtr0088447)

HSP 1 Score: 56.6102 bits (135), Expect = 2.442e-8
Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVII 247
            MGRKKI ++ I D+R R  TF+KR+ G+ KKA EL+ LC   I++II
Sbjct:    1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALII 47          
BLAST of MADS-box domain-containing protein vs. Ensembl Zebrafish
Match: mef2d (myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164])

HSP 1 Score: 56.9954 bits (136), Expect = 3.875e-10
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Zebrafish
Match: mef2cb (myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7])

HSP 1 Score: 56.225 bits (134), Expect = 6.642e-10
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Zebrafish
Match: mef2ca (myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253])

HSP 1 Score: 55.8398 bits (133), Expect = 1.126e-9
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQIARIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Zebrafish
Match: mef2ca (myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253])

HSP 1 Score: 55.8398 bits (133), Expect = 1.126e-9
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQIARIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Zebrafish
Match: mef2ca (myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253])

HSP 1 Score: 55.8398 bits (133), Expect = 1.126e-9
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQIARIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Xenopus
Match: mef2a (myocyte enhancer factor 2A [Source:NCBI gene;Acc:100216045])

HSP 1 Score: 56.225 bits (134), Expect = 4.535e-9
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Xenopus
Match: mef2a (myocyte enhancer factor 2A [Source:NCBI gene;Acc:100216045])

HSP 1 Score: 56.6102 bits (135), Expect = 1.069e-8
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Xenopus
Match: mef2c (MADS box transcription enhancer factor 2, polypeptide C (myocyte enhancer factor 2C) [Source:NCBI gene;Acc:100127198])

HSP 1 Score: 57.3806 bits (137), Expect = 1.938e-8
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Xenopus
Match: mef2d (myocyte enhancer factor 2D [Source:NCBI gene;Acc:780389])

HSP 1 Score: 57.7658 bits (138), Expect = 1.989e-8
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Xenopus
Match: mef2c (MADS box transcription enhancer factor 2, polypeptide C (myocyte enhancer factor 2C) [Source:NCBI gene;Acc:100127198])

HSP 1 Score: 57.7658 bits (138), Expect = 1.999e-8
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Mouse
Match: Mef2c (myocyte enhancer factor 2C [Source:MGI Symbol;Acc:MGI:99458])

HSP 1 Score: 56.6102 bits (135), Expect = 1.041e-9
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Mouse
Match: Mef2c (myocyte enhancer factor 2C [Source:MGI Symbol;Acc:MGI:99458])

HSP 1 Score: 56.6102 bits (135), Expect = 1.331e-9
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Mouse
Match: Mef2a (myocyte enhancer factor 2A [Source:MGI Symbol;Acc:MGI:99532])

HSP 1 Score: 55.8398 bits (133), Expect = 2.038e-9
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Mouse
Match: Mef2c (myocyte enhancer factor 2C [Source:MGI Symbol;Acc:MGI:99458])

HSP 1 Score: 55.8398 bits (133), Expect = 3.156e-9
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Mouse
Match: Mef2c (myocyte enhancer factor 2C [Source:MGI Symbol;Acc:MGI:99458])

HSP 1 Score: 55.8398 bits (133), Expect = 3.541e-9
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. UniProt/SwissProt
Match: sp|Q12224|RLM1_YEAST (Transcription factor RLM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RLM1 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.731e-10
Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNK-DLVYKFS 277
            MGR+KI +  I DDR RA TF KR+ GLFKKA EL+ LC V I+VII+   +  Y+FS
Sbjct:    1 MGRRKIEIQRISDDRNRAVTFIKRKAGLFKKAHELSVLCQVDIAVIILGSNNTFYEFS 58          
BLAST of MADS-box domain-containing protein vs. UniProt/SwissProt
Match: sp|P38128|SMP1_YEAST (Transcription factor SMP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SMP1 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.275e-9
Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNK-DLVYKFS 277
            MGR+KI +  I+DDR R  TF KR+ GLFKKA EL+ LC V I+VII+   +  Y++S
Sbjct:    1 MGRRKIEIEPIKDDRNRTVTFIKRKAGLFKKAHELSVLCQVDIAVIILGSNNTFYEYS 58          
BLAST of MADS-box domain-containing protein vs. UniProt/SwissProt
Match: sp|Q4PSU4|AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.198e-8
Identity = 30/64 (46.88%), Postives = 38/64 (59.38%), Query Frame = 2
Query:  104 AMGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNKDLVYKFSDPPHSF 295
            ++GR+KI M  I+ +  R  TF KRR GLFKKASEL  LCG  I +I      V+  +  P SF
Sbjct:   61 SIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGII------VFSPAKKPFSF 118          
BLAST of MADS-box domain-containing protein vs. UniProt/SwissProt
Match: sp|O64703|AGL29_ARATH (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 2.431e-8
Identity = 24/47 (51.06%), Postives = 31/47 (65.96%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVII 247
            MGR+KI M  ++D   R  TF KRR GLFKKASEL  LC   + +++
Sbjct:    1 MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVV 47          
BLAST of MADS-box domain-containing protein vs. UniProt/SwissProt
Match: sp|Q54QY7|SRFD_DICDI (Serum factor response D OS=Dictyostelium discoideum OX=44689 GN=srfD PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 2.614e-8
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF+KR+ GL KKA EL  LC  ++S++IVN
Sbjct:    1 MGRKKIKIQRIPDERNRQVTFNKRKNGLIKKAMELALLCDSTVSLVIVN 49          
BLAST of MADS-box domain-containing protein vs. TrEMBL
Match: S8DI54 (MADS-box domain-containing protein (Fragment) OS=Genlisea aurea OX=192259 GN=M569_15720 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.597e-10
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 2
Query:  104 AMGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNKDLVYKFSDPPHSF 295
            ++GR+KI M  IEDD  R  TF KRR+G+FKKA+EL+ LCGV I+VII      + F+   +SF
Sbjct:    8 SLGRRKIEMKLIEDDNARTVTFSKRRVGVFKKATELSILCGVQIAVII------FSFAGRAYSF 65          
BLAST of MADS-box domain-containing protein vs. TrEMBL
Match: A0A0G4IL56 (MADS-box domain-containing protein OS=Plasmodiophora brassicae OX=37360 GN=PBRA_004543 PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.291e-10
Identity = 29/57 (50.88%), Postives = 42/57 (73.68%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNKDLVYKFS 277
            MGR+KI +  I D + R  TF+KR++GL KKA EL+ LCGV +++++  KD +YKFS
Sbjct:    1 MGRRKIKIEMIPDAKNRTVTFNKRKVGLLKKAIELSVLCGVDVALVVFGKDTIYKFS 57          
BLAST of MADS-box domain-containing protein vs. TrEMBL
Match: A0A0H5RAW9 (MADS-box domain-containing protein OS=Spongospora subterranea OX=70186 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.078e-9
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNKDLVYKFS 277
            MGR+KI +  I D R R  TF+KR++GL KKA EL+ LCG  I+++I  ++ VYKFS
Sbjct:    1 MGRRKIKIEMIADKRNRTVTFNKRKLGLMKKAIELSVLCGTDIALVIFGQESVYKFS 57          
BLAST of MADS-box domain-containing protein vs. TrEMBL
Match: A0A016U7J8 (MADS-box domain-containing protein OS=Ancylostoma ceylanicum OX=53326 GN=Acey_s0053.g2316 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 3.723e-9
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 2
Query:   83 ILHKIIFAMGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            +L ++ F+MGRKKI +  I+D+R R  TF KR+ GL KKA EL+ LC   I++I+ N
Sbjct:   18 LLRRVTFSMGRKKIQITRIQDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIVFN 74          
BLAST of MADS-box domain-containing protein vs. TrEMBL
Match: A0A4P9ZI70 (SRF-TF-domain-containing protein (Fragment) OS=Metschnikowia bicuspidata OX=27322 GN=METBISCDRAFT_11366 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 4.676e-9
Identity = 33/58 (56.90%), Postives = 43/58 (74.14%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNK-DLVYKFS 277
            MGR+KI +  +EDDR R+ TF KR+ GLFKKA EL+ LC V ++VIIV   + VY+FS
Sbjct:    1 MGRRKIEIEPLEDDRNRSVTFVKRKAGLFKKAYELSVLCEVDLAVIIVGSNNKVYEFS 58          
BLAST of MADS-box domain-containing protein vs. Ensembl Cavefish
Match: mef2d (myocyte enhancer factor 2D [Source:NCBI gene;Acc:103037494])

HSP 1 Score: 57.7658 bits (138), Expect = 1.291e-8
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Cavefish
Match: mef2d (myocyte enhancer factor 2D [Source:NCBI gene;Acc:103037494])

HSP 1 Score: 57.7658 bits (138), Expect = 1.299e-8
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Cavefish
Match: mef2d (myocyte enhancer factor 2D [Source:NCBI gene;Acc:103037494])

HSP 1 Score: 57.7658 bits (138), Expect = 1.332e-8
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Cavefish
Match: mef2d (myocyte enhancer factor 2D [Source:NCBI gene;Acc:103037494])

HSP 1 Score: 57.7658 bits (138), Expect = 1.366e-8
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Cavefish
Match: mef2d (myocyte enhancer factor 2D [Source:NCBI gene;Acc:103037494])

HSP 1 Score: 57.7658 bits (138), Expect = 1.416e-8
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Yeast
Match: RLM1 (MADS-box transcription factor; component of the protein kinase C-mediated MAP kinase pathway involved in the maintenance of cell integrity; phosphorylated and activated by the MAP-kinase Slt2p; RLM1 has a paralog, SMP1, that arose from the whole genome duplication [Source:SGD;Acc:S000006010])

HSP 1 Score: 66.6254 bits (161), Expect = 2.492e-12
Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNK-DLVYKFS 277
            MGR+KI +  I DDR RA TF KR+ GLFKKA EL+ LC V I+VII+   +  Y+FS
Sbjct:    1 MGRRKIEIQRISDDRNRAVTFIKRKAGLFKKAHELSVLCQVDIAVIILGSNNTFYEFS 58          
BLAST of MADS-box domain-containing protein vs. Ensembl Yeast
Match: SMP1 (MADS-box transcription factor involved in osmotic stress response; SMP1 has a paralog, RLM1, that arose from the whole genome duplication [Source:SGD;Acc:S000000386])

HSP 1 Score: 62.7734 bits (151), Expect = 3.277e-11
Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNK-DLVYKFS 277
            MGR+KI +  I+DDR R  TF KR+ GLFKKA EL+ LC V I+VII+   +  Y++S
Sbjct:    1 MGRRKIEIEPIKDDRNRTVTFIKRKAGLFKKAHELSVLCQVDIAVIILGSNNTFYEYS 58          
BLAST of MADS-box domain-containing protein vs. Ensembl Yeast
Match: MCM1 (Transcription factor; involved in cell-type-specific transcription and pheromone response; plays a central role in the formation of both repressor and activator complexes; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000004646])

HSP 1 Score: 56.225 bits (134), Expect = 2.592e-9
Identity = 26/58 (44.83%), Postives = 39/58 (67.24%), Query Frame = 2
Query:  113 RKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNK-DLVYKFSDP 283
            R+KI + FIE+  +R  TF KR+ G+ KKA EL+ L G  + +++V++  LVY FS P
Sbjct:   18 RRKIEIKFIENKTRRHVTFSKRKHGIMKKAFELSVLTGTQVLLLVVSETGLVYTFSTP 75          
BLAST of MADS-box domain-containing protein vs. Ensembl Yeast
Match: ARG80 (Transcription factor involved in regulating arginine-responsive genes; acts with Arg81p and Arg82p [Source:SGD;Acc:S000004645])

HSP 1 Score: 51.2174 bits (121), Expect = 3.763e-8
Identity = 26/58 (44.83%), Postives = 38/58 (65.52%), Query Frame = 2
Query:  113 RKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIV-NKDLVYKFSDP 283
            R+K  + +IE+  +R  TF KRR G+ KKA EL+ L G +I ++I+ N  LVY F+ P
Sbjct:   80 RRKQPIRYIENKTRRHVTFSKRRHGIMKKAYELSVLTGANILLLILANSGLVYTFTTP 137          
BLAST of MADS-box domain-containing protein vs. Ensembl Nematostella
Match: MEF2 (MADS-box transcription factor; Myocyte enhancer factor 2 splice variant IV; Predicted protein [Source:UniProtKB/TrEMBL;Acc:Q6S5H1])

HSP 1 Score: 57.3806 bits (137), Expect = 1.332e-9
Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI ++ I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQISRIGDERNRQVTFTKRKFGLMKKAYELSILCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Nematostella
Match: EDO43028 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZP6])

HSP 1 Score: 48.9062 bits (115), Expect = 3.162e-7
Identity = 23/57 (40.35%), Postives = 36/57 (63.16%), Query Frame = 2
Query:  110 GRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNKDL-VYKFS 277
            GR KI M FI +  +R +TF KR+ G+ KKA EL+ L G  + +++ ++   VY F+
Sbjct:   34 GRVKIEMKFISNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFA 90          
BLAST of MADS-box domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000029602.1 (pep primary_assembly:ASM223467v1:4:2313004:2320793:-1 gene:ENSORLG00000029337.1 transcript:ENSORLT00000029602.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 55.8398 bits (133), Expect = 9.561e-10
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI ++ I D R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Medaka
Match: mef2d (myocyte-specific enhancer factor 2D homolog [Source:NCBI gene;Acc:101174373])

HSP 1 Score: 57.7658 bits (138), Expect = 1.083e-8
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Medaka
Match: mef2d (myocyte-specific enhancer factor 2D homolog [Source:NCBI gene;Acc:101174373])

HSP 1 Score: 57.7658 bits (138), Expect = 1.256e-8
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Medaka
Match: mef2d (myocyte-specific enhancer factor 2D homolog [Source:NCBI gene;Acc:101174373])

HSP 1 Score: 57.7658 bits (138), Expect = 1.275e-8
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Ensembl Medaka
Match: mef2d (myocyte-specific enhancer factor 2D homolog [Source:NCBI gene;Acc:101174373])

HSP 1 Score: 57.7658 bits (138), Expect = 1.306e-8
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Planmine SMEST
Match: SMESG000011575.1 (SMESG000011575.1)

HSP 1 Score: 517.309 bits (1331), Expect = 0.000e+0
Identity = 312/314 (99.36%), Postives = 312/314 (99.36%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNKDLVYKFSDPPHSFYXXXXXXXXXXXXDFNNDTLLDFINKKAQKNAYINDSNSIEHHSLEEEQNGTLTDDEEDQRFLDVLDEHHLRDVYNNIDPDISPIKENVDILQIKNLNESDQMNAPGGLMAYXXXXXXXXXXXXXXXXXXXXEMPMEFPSKGHEEMITSTKMENVYSELVTVSTTDTSYLYDNTSYSLSNSNWQTYKSHXXXXXXXXXXXXXXXXXXXXXETPTFETCSNGIILHLPNILHEEDDRPNLKRIKRFNDSIDT 1048
            MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNKDLVYKFSDPPHSFYKKINNKPEKIEEDFNNDTLLDFINKKAQKNAYINDSNSIEHHSLEEEQNGTLTDDEEDQRFLDVLDEHHLRDVYNNIDPDISPIKENVDILQIKNLNESDQMNAPGGLMAYNFASNNQNIAQI APNNSINEMPMEFPSKGHEE ITSTKMENVYSELVTVSTTDTSYLYDNTSYSLSNSNWQTYKSHNYSNTNLNFNNANYQNATNYLETPTFETCSNGIILHLPNILHEEDDRPNLKRIKRFNDSIDT
Sbjct:    1 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNKDLVYKFSDPPHSFYKKINNKPEKIEEDFNNDTLLDFINKKAQKNAYINDSNSIEHHSLEEEQNGTLTDDEEDQRFLDVLDEHHLRDVYNNIDPDISPIKENVDILQIKNLNESDQMNAPGGLMAYNFASNNQNIAQINAPNNSINEMPMEFPSKGHEERITSTKMENVYSELVTVSTTDTSYLYDNTSYSLSNSNWQTYKSHNYSNTNLNFNNANYQNATNYLETPTFETCSNGIILHLPNILHEEDDRPNLKRIKRFNDSIDT 314          
BLAST of MADS-box domain-containing protein vs. Planmine SMEST
Match: SMESG000011575.1 (SMESG000011575.1)

HSP 1 Score: 501.901 bits (1291), Expect = 4.875e-179
Identity = 305/307 (99.35%), Postives = 305/307 (99.35%), Query Frame = 2
Query:  128 MNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNKDLVYKFSDPPHSFYXXXXXXXXXXXXDFNNDTLLDFINKKAQKNAYINDSNSIEHHSLEEEQNGTLTDDEEDQRFLDVLDEHHLRDVYNNIDPDISPIKENVDILQIKNLNESDQMNAPGGLMAYXXXXXXXXXXXXXXXXXXXXEMPMEFPSKGHEEMITSTKMENVYSELVTVSTTDTSYLYDNTSYSLSNSNWQTYKSHXXXXXXXXXXXXXXXXXXXXXETPTFETCSNGIILHLPNILHEEDDRPNLKRIKRFNDSIDT 1048
            MNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNKDLVYKFSDPPHSFYKKINNKPEKIEEDFNNDTLLDFINKKAQKNAYINDSNSIEHHSLEEEQNGTLTDDEEDQRFLDVLDEHHLRDVYNNIDPDISPIKENVDILQIKNLNESDQMNAPGGLMAYNFASNNQNIAQI APNNSINEMPMEFPSKGHEE ITSTKMENVYSELVTVSTTDTSYLYDNTSYSLSNSNWQTYKSHNYSNTNLNFNNANYQNATNYLETPTFETCSNGIILHLPNILHEEDDRPNLKRIKRFNDSIDT
Sbjct:    1 MNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNKDLVYKFSDPPHSFYKKINNKPEKIEEDFNNDTLLDFINKKAQKNAYINDSNSIEHHSLEEEQNGTLTDDEEDQRFLDVLDEHHLRDVYNNIDPDISPIKENVDILQIKNLNESDQMNAPGGLMAYNFASNNQNIAQINAPNNSINEMPMEFPSKGHEERITSTKMENVYSELVTVSTTDTSYLYDNTSYSLSNSNWQTYKSHNYSNTNLNFNNANYQNATNYLETPTFETCSNGIILHLPNILHEEDDRPNLKRIKRFNDSIDT 307          
BLAST of MADS-box domain-containing protein vs. Planmine SMEST
Match: SMESG000006802.1 (SMESG000006802.1)

HSP 1 Score: 62.003 bits (149), Expect = 4.592e-10
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  IED+R R  TF+KR++GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIQIKRIEDERNRQVTFNKRKMGLMKKAYELSVLCDCEIALIIFN 49          
BLAST of MADS-box domain-containing protein vs. Planmine SMEST
Match: SMESG000040479.1 (SMESG000040479.1)

HSP 1 Score: 56.225 bits (134), Expect = 3.142e-9
Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 2
Query:  107 MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVN 253
            MGRKKI +  I+D+R R  TF KR+ GL KKA EL+ LC   I++II N
Sbjct:    1 MGRKKIEIQKIKDERTRQVTFAKRKSGLMKKAYELSVLCDCEIALIIFN 49          
The following BLAST results are available for this feature:
BLAST of MADS-box domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
MEF2A9.608e-1055.10myocyte enhancer factor 2A [Source:HGNC Symbol;Acc... [more]
MEF2C1.126e-955.10myocyte enhancer factor 2C [Source:HGNC Symbol;Acc... [more]
MEF2A1.392e-955.10myocyte enhancer factor 2A [Source:HGNC Symbol;Acc... [more]
MEF2C2.136e-955.10myocyte enhancer factor 2C [Source:HGNC Symbol;Acc... [more]
MEF2D4.349e-955.10myocyte enhancer factor 2D [Source:HGNC Symbol;Acc... [more]
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BLAST of MADS-box domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
mef-22.594e-953.06Related to vertebrate MEF2 transcription factor [... [more]
unc-1204.789e-637.29pep chromosome:WBcel235:I:8460225:8463015:1 gene:W... [more]
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BLAST of MADS-box domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Mef22.089e-853.19gene:FBgn0011656 transcript:FBtr0088446[more]
Mef22.262e-853.19gene:FBgn0011656 transcript:FBtr0088444[more]
Mef22.349e-853.19gene:FBgn0011656 transcript:FBtr0088443[more]
Mef22.382e-853.19gene:FBgn0011656 transcript:FBtr0088445[more]
Mef22.442e-853.19gene:FBgn0011656 transcript:FBtr0088447[more]
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BLAST of MADS-box domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
mef2d3.875e-1055.10myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GE... [more]
mef2cb6.642e-1055.10myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-G... [more]
mef2ca1.126e-955.10myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-G... [more]
mef2ca1.126e-955.10myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-G... [more]
mef2ca1.126e-955.10myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-G... [more]
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BLAST of MADS-box domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
mef2a4.535e-955.10myocyte enhancer factor 2A [Source:NCBI gene;Acc:1... [more]
mef2a1.069e-855.10myocyte enhancer factor 2A [Source:NCBI gene;Acc:1... [more]
mef2c1.938e-855.10MADS box transcription enhancer factor 2, polypept... [more]
mef2d1.989e-855.10myocyte enhancer factor 2D [Source:NCBI gene;Acc:7... [more]
mef2c1.999e-855.10MADS box transcription enhancer factor 2, polypept... [more]
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BLAST of MADS-box domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Mef2c1.041e-955.10myocyte enhancer factor 2C [Source:MGI Symbol;Acc:... [more]
Mef2c1.331e-955.10myocyte enhancer factor 2C [Source:MGI Symbol;Acc:... [more]
Mef2a2.038e-955.10myocyte enhancer factor 2A [Source:MGI Symbol;Acc:... [more]
Mef2c3.156e-955.10myocyte enhancer factor 2C [Source:MGI Symbol;Acc:... [more]
Mef2c3.541e-955.10myocyte enhancer factor 2C [Source:MGI Symbol;Acc:... [more]
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BLAST of MADS-box domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q12224|RLM1_YEAST1.731e-1056.90Transcription factor RLM1 OS=Saccharomyces cerevis... [more]
sp|P38128|SMP1_YEAST2.275e-953.45Transcription factor SMP1 OS=Saccharomyces cerevis... [more]
sp|Q4PSU4|AGL61_ARATH2.198e-846.88Agamous-like MADS-box protein AGL61 OS=Arabidopsis... [more]
sp|O64703|AGL29_ARATH2.431e-851.06Agamous-like MADS-box protein AGL29 OS=Arabidopsis... [more]
sp|Q54QY7|SRFD_DICDI2.614e-855.10Serum factor response D OS=Dictyostelium discoideu... [more]
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BLAST of MADS-box domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
S8DI541.597e-1051.56MADS-box domain-containing protein (Fragment) OS=G... [more]
A0A0G4IL562.291e-1050.88MADS-box domain-containing protein OS=Plasmodiopho... [more]
A0A0H5RAW91.078e-952.63MADS-box domain-containing protein OS=Spongospora ... [more]
A0A016U7J83.723e-949.12MADS-box domain-containing protein OS=Ancylostoma ... [more]
A0A4P9ZI704.676e-956.90SRF-TF-domain-containing protein (Fragment) OS=Met... [more]
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BLAST of MADS-box domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
mef2d1.291e-855.10myocyte enhancer factor 2D [Source:NCBI gene;Acc:1... [more]
mef2d1.299e-855.10myocyte enhancer factor 2D [Source:NCBI gene;Acc:1... [more]
mef2d1.332e-855.10myocyte enhancer factor 2D [Source:NCBI gene;Acc:1... [more]
mef2d1.366e-855.10myocyte enhancer factor 2D [Source:NCBI gene;Acc:1... [more]
mef2d1.416e-855.10myocyte enhancer factor 2D [Source:NCBI gene;Acc:1... [more]
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BLAST of MADS-box domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of MADS-box domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 4
Match NameE-valueIdentityDescription
RLM12.492e-1256.90MADS-box transcription factor; component of the pr... [more]
SMP13.277e-1153.45MADS-box transcription factor involved in osmotic ... [more]
MCM12.592e-944.83Transcription factor; involved in cell-type-specif... [more]
ARG803.763e-844.83Transcription factor involved in regulating argini... [more]
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BLAST of MADS-box domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
MEF21.332e-955.10MADS-box transcription factor; Myocyte enhancer fa... [more]
EDO430283.162e-740.35Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of MADS-box domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSORLT00000029602.19.561e-1055.10pep primary_assembly:ASM223467v1:4:2313004:2320793... [more]
mef2d1.083e-855.10myocyte-specific enhancer factor 2D homolog [Sourc... [more]
mef2d1.256e-855.10myocyte-specific enhancer factor 2D homolog [Sourc... [more]
mef2d1.275e-855.10myocyte-specific enhancer factor 2D homolog [Sourc... [more]
mef2d1.306e-855.10myocyte-specific enhancer factor 2D homolog [Sourc... [more]
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BLAST of MADS-box domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 4
Match NameE-valueIdentityDescription
SMESG000011575.10.000e+099.36SMESG000011575.1[more]
SMESG000011575.14.875e-17999.35SMESG000011575.1[more]
SMESG000006802.14.592e-1057.14SMESG000006802.1[more]
SMESG000040479.13.142e-955.10SMESG000040479.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30018122 ID=SMED30018122|Name=MADS-box domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1295bp
TTTAAATACGGTAATAATAAATTAAATATCTATATATTTAAAAAATAGCG
ATAAGTAGTATTATTTTATTCTGAATTTATAAATTTTACATAAAATTATT
TTTGCTATGGGTCGAAAGAAAATCTCTATGAATTTTATAGAAGATGACCG
TAAAAGAGCTAGCACGTTTGACAAACGGAGAATCGGGCTATTTAAAAAGG
CCAGCGAACTGAATCGACTATGTGGAGTCAGTATCTCAGTTATTATTGTT
AACAAAGACCTTGTGTATAAATTCTCGGATCCGCCACATTCATTTTATAA
AAAAATAAATAATAAACCTGAAAAAATTGAAGAAGATTTCAATAATGACA
CATTATTGGATTTTATAAATAAGAAAGCTCAGAAAAATGCGTATATTAAT
GACAGTAATTCAATTGAGCATCATTCATTGGAAGAGGAGCAAAATGGTAC
TTTGACAGACGACGAAGAAGATCAAAGATTCCTGGATGTATTAGATGAAC
ATCATCTGAGAGATGTTTACAATAACATTGATCCAGACATTAGCCCAATA
AAAGAAAATGTCGACATCCTTCAGATAAAGAATCTGAACGAATCAGATCA
AATGAATGCACCAGGAGGTTTGATGGCCTATAATTTTGCTTCCAATAACC
AGAACATTGCTCAAATAATTGCTCCTAACAATTCAATAAACGAAATGCCT
ATGGAATTTCCATCTAAAGGACACGAAGAAATGATAACTTCAACCAAAAT
GGAAAATGTCTACAGTGAGCTAGTTACCGTGTCCACAACGGATACATCAT
ACTTATATGATAATACATCCTACAGTCTCAGTAATTCTAACTGGCAAACC
TATAAGTCGCATAATTATTCAAATACAAACTTAAATTTCAACAATGCAAA
TTATCAGAACGCAACGAATTACTTAGAAACTCCAACGTTTGAAACTTGTA
GCAATGGAATAATACTGCATTTACCCAATATTTTACACGAGGAAGACGAT
CGTCCGAATTTAAAGAGAATTAAACGTTTTAATGATTCGATAGATACCTA
AAGTTTTCATCTTTATTAACATAGCCTAGATTTCCTGGGAATTCAATATT
TTCCGCTTATTTAGAGATTTCAAATCAGGCATATTTTAATATAAGGATTT
TTTATTTTTTGTATATTGCACATCGTGATTAAGTTTTGGTGAAAATTTTA
TTGATTTCTCATGCTTAATTTTTTGAGGGTATTTTAATTACTATTTTCTA
TGAATTTATTGGTTTATAAAATCATTTTAAAATTTTGAGTATTTC
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protein sequence of SMED30018122-orf-1

>SMED30018122-orf-1 ID=SMED30018122-orf-1|Name=SMED30018122-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=315bp
MGRKKISMNFIEDDRKRASTFDKRRIGLFKKASELNRLCGVSISVIIVNK
DLVYKFSDPPHSFYKKINNKPEKIEEDFNNDTLLDFINKKAQKNAYINDS
NSIEHHSLEEEQNGTLTDDEEDQRFLDVLDEHHLRDVYNNIDPDISPIKE
NVDILQIKNLNESDQMNAPGGLMAYNFASNNQNIAQIIAPNNSINEMPME
FPSKGHEEMITSTKMENVYSELVTVSTTDTSYLYDNTSYSLSNSNWQTYK
SHNYSNTNLNFNNANYQNATNYLETPTFETCSNGIILHLPNILHEEDDRP
NLKRIKRFNDSIDT*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000026gut
PLANA:0000034epidermis
PLANA:0000070intestinal phagocyte
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR036879TF_MADSbox_sf
IPR033897MADS_SRF-like
IPR002100TF_MADSbox
Vocabulary: molecular function
TermDefinition
GO:0000981RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0000987core promoter proximal region sequence-specific DNA binding
GO:0046983protein dimerization activity
GO:0003677DNA binding
GO:0000977RNA polymerase II regulatory region sequence-specific DNA binding
Vocabulary: biological process
TermDefinition
GO:0000165MAPK cascade
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
GO:0045944positive regulation of transcription from RNA polymerase II promoter
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 3..23
score: 40.49
coord: 23..38
score: 66.01
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..59
e-value: 6.4E-19
score: 78.9
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..54
e-value: 4.5E-16
score: 58.1
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 1..49
score: 19.133
IPR036879Transcription factor, MADS-box superfamilyGENE3DG3DSA:3.40.1810.10coord: 13..95
e-value: 3.4E-13
score: 51.4
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILYSSF55455SRF-likecoord: 1..59
NoneNo IPR availablePANTHERPTHR11945:SF221SERUM RESPONSE FACTORcoord: 4..271
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 4..271
IPR033897MADS SRF-likeCDDcd00266MADS_SRF_likecoord: 2..81
e-value: 9.77029E-21
score: 82.6931