Ribose-5-phosphate isomerase
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30018061 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 7
Homology
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Human
Match: RPIA (ribose 5-phosphate isomerase A [Source:HGNC Symbol;Acc:HGNC:10297]) HSP 1 Score: 267.314 bits (682), Expect = 1.744e-88 Identity = 131/236 (55.51%), Postives = 168/236 (71.19%), Query Frame = 2 Query: 2 MSLKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIRTK 709 MS E KK A A++ +V+N Q +GIGSGSTI AV+R+A +V +E L + C PTSFQA+ LIL+Y L L L+ + E+D+A DGADEVD +L +IKGGGGC QEKI+A + I+IAD KDSK LGD W +GIPIEVIP+AY + A+ KFGG LR A NK GPVVTDNGNFI+DWKF + + W E++ + MIPG+V+TGLFI+MA V+FG DG+V +R K Sbjct: 75 MSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQKFGGVVELRMAVNKAGPVVTDNGNFILDWKFD--RVHKWSEVNTAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMREK 308
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Celegans
Match: rpia-1 (Probable-ribose 5-phosphate isomerase [Source:UniProtKB/Swiss-Prot;Acc:P41994]) HSP 1 Score: 209.149 bits (531), Expect = 8.131e-67 Identity = 111/229 (48.47%), Postives = 142/229 (62.01%), Query Frame = 2 Query: 14 EIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLT-VSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQS-NNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTV 694 E KK AA+ +KYVQ+G ++G+GSGST+ + VE L L + C PTSF K ++E LP+ L+ + ELD+ DGADEVD T IKGGGGC QEKI+ K +IAD KDSK LGD + +PIEV+PLA + + +I GG LRQA K GP+VTDNGNFI+DW+F+ S +W I + L PG+VETGLFI VFF SDG+V Sbjct: 15 EQAKKRAAFACGEKYVQSGCRLGVGSGSTVKYLVEYLKQGFQNGSLKDIICVPTSFLTKQWLIESGLPVSDLDSHPELDVCIDGADEVDGQFTCIKGGGGCLAQEKIVQTAAKNFYVIADYLKDSKHLGDRYPN-VPIEVLPLAAQPLLRSIPRAEGGSCQLRQAVKKCGPIVTDNGNFIIDWQFEKNVSGRDWFAIQQRLANTPGIVETGLFIGCVDAVFFAYSDGSV 242
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Celegans
Match: rpia-1 (Probable-ribose 5-phosphate isomerase [Source:UniProtKB/Swiss-Prot;Acc:P41994]) HSP 1 Score: 209.149 bits (531), Expect = 8.131e-67 Identity = 111/229 (48.47%), Postives = 142/229 (62.01%), Query Frame = 2 Query: 14 EIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLT-VSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQS-NNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTV 694 E KK AA+ +KYVQ+G ++G+GSGST+ + VE L L + C PTSF K ++E LP+ L+ + ELD+ DGADEVD T IKGGGGC QEKI+ K +IAD KDSK LGD + +PIEV+PLA + + +I GG LRQA K GP+VTDNGNFI+DW+F+ S +W I + L PG+VETGLFI VFF SDG+V Sbjct: 15 EQAKKRAAFACGEKYVQSGCRLGVGSGSTVKYLVEYLKQGFQNGSLKDIICVPTSFLTKQWLIESGLPVSDLDSHPELDVCIDGADEVDGQFTCIKGGGGCLAQEKIVQTAAKNFYVIADYLKDSKHLGDRYPN-VPIEVLPLAAQPLLRSIPRAEGGSCQLRQAVKKCGPIVTDNGNFIIDWQFEKNVSGRDWFAIQQRLANTPGIVETGLFIGCVDAVFFAYSDGSV 242
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Fly
Match: Rpi (gene:FBgn0050410 transcript:FBtr0305675) HSP 1 Score: 243.432 bits (620), Expect = 2.753e-80 Identity = 115/224 (51.34%), Postives = 168/224 (75.00%), Query Frame = 2 Query: 47 IDKYVQNGQKI-GIGSGSTITFAVERLAHKVIEE-KLT-VSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIRTK 709 +D++V KI GIGSGST+ +AV+R+A +V +E +LT + C P+S+QA+ LIL+Y L L L+ N +D+A DGADEVD+++ +IKGGGGC LQEK++A C K I++AD +K+S LG+ W RG+PIEV P+AY I+ IE FGGEA LR A K GP+VTDNGNF++DWKF A + +W E++R + +IPG++ETGLF++MA + ++G ++G+V ++ K Sbjct: 18 VDQWVTEDTKILGIGSGSTVVYAVQRIAERVWKEGELTDLICVPSSYQARHLILDYNLNLGDLDRNPNIDVAIDGADEVDRHMVLIKGGGGCLLQEKVVASCAKHFIVVADYTKNSIRLGEQWCRGVPIEVAPMAYVPIKLHIEALFGGEASLRMAKVKAGPIVTDNGNFLLDWKFIANREYDWDEVNRAITLIPGVLETGLFVNMAHKCYYGMANGSVKVQNK 241
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Fly
Match: Rpi (gene:FBgn0050410 transcript:FBtr0301852) HSP 1 Score: 243.432 bits (620), Expect = 2.753e-80 Identity = 115/224 (51.34%), Postives = 168/224 (75.00%), Query Frame = 2 Query: 47 IDKYVQNGQKI-GIGSGSTITFAVERLAHKVIEE-KLT-VSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIRTK 709 +D++V KI GIGSGST+ +AV+R+A +V +E +LT + C P+S+QA+ LIL+Y L L L+ N +D+A DGADEVD+++ +IKGGGGC LQEK++A C K I++AD +K+S LG+ W RG+PIEV P+AY I+ IE FGGEA LR A K GP+VTDNGNF++DWKF A + +W E++R + +IPG++ETGLF++MA + ++G ++G+V ++ K Sbjct: 18 VDQWVTEDTKILGIGSGSTVVYAVQRIAERVWKEGELTDLICVPSSYQARHLILDYNLNLGDLDRNPNIDVAIDGADEVDRHMVLIKGGGGCLLQEKVVASCAKHFIVVADYTKNSIRLGEQWCRGVPIEVAPMAYVPIKLHIEALFGGEASLRMAKVKAGPIVTDNGNFLLDWKFIANREYDWDEVNRAITLIPGVLETGLFVNMAHKCYYGMANGSVKVQNK 241
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Zebrafish
Match: rpia (ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) [Source:ZFIN;Acc:ZDB-GENE-041114-24]) HSP 1 Score: 292.738 bits (748), Expect = 3.386e-99 Identity = 138/232 (59.48%), Postives = 173/232 (74.57%), Query Frame = 2 Query: 8 LKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIR 703 + E KK AAY A+D ++QN Q IG+GSGSTI +AV+RLA KV +EKL + C PTSFQA+ LIL++ LPL L+ + ELD+A DGADEVD LT+IKGGGGC QEKI+A C K I+IAD KDSK LG WK+G+P+EVIP+AY + AI +FGGEA+LR A +K GPVVTDN NFI+DWKF+ Q NW E++ + MIPG+VETGLF+ MA V+FG DG+V R Sbjct: 41 MAEEAKKLAAYAAVDNHIQNNQVIGVGSGSTIVYAVDRLAEKVRQEKLNIVCVPTSFQARQLILQHGLPLSDLDRHPELDVAIDGADEVDTALTLIKGGGGCLTQEKIVAGCAKHFIVIADYRKDSKALGQQWKKGVPVEVIPMAYVPVSRAIARRFGGEAVLRMAVSKAGPVVTDNSNFILDWKFEHAQ--NWKEVNTAIKMIPGVVETGLFVGMAERVYFGMEDGSVKTR 270
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Zebrafish
Match: rpia (ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) [Source:ZFIN;Acc:ZDB-GENE-041114-24]) HSP 1 Score: 261.922 bits (668), Expect = 5.210e-87 Identity = 130/235 (55.32%), Postives = 163/235 (69.36%), Query Frame = 2 Query: 8 LKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKV-IEEKLTVSCAPTSF--QAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIR 703 + E KK AAY A+D ++QN Q IG+GSGSTI +AV+RL I K C QA+ LIL++ LPL L+ + ELD+A DGADEVD LT+IKGGGGC QEKI+A C K I+IAD KDSK LG WK+G+P+EVIP+AY + AI +FGGEA+LR A +K GPVVTDN NFI+DWKF+ Q NW E++ + MIPG+VETGLF+ MA V+FG DG+V R Sbjct: 41 MAEEAKKLAAYAAVDNHIQNNQVIGVGSGSTIVYAVDRLGKTFNISLKRLCLCVTVELLIQARQLILQHGLPLSDLDRHPELDVAIDGADEVDTALTLIKGGGGCLTQEKIVAGCAKHFIVIADYRKDSKALGQQWKKGVPVEVIPMAYVPVSRAIAHRFGGEAVLRMAVSKAGPVVTDNSNFILDWKFEHAQ--NWKEVNTAIKMIPGVVETGLFVGMAERVYFGMEDGSVKTR 273
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Xenopus
Match: ccdc65 (coiled-coil domain containing 65 [Source:Xenbase;Acc:XB-GENE-1002732]) HSP 1 Score: 234.572 bits (597), Expect = 6.247e-77 Identity = 113/208 (54.33%), Postives = 148/208 (71.15%), Query Frame = 2 Query: 8 LKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMV 631 + E K+ A + A+D +V+N Q +GIGSGSTI AV RLA +V +E L V C PTSFQA+ LIL+ L L L+ + ELD+A DGADEVD L +IKGGGGC QEKI+A C K I+IAD KDSK G+ WK+G+PIEVIP+AY + A++++FGG A LR A +K GPVVTDNGNF++DWKF + + W ++ ++ MIPG V Sbjct: 13 MTEEAKRLAGWAAVDNHVKNNQALGIGSGSTIVHAVNRLAERVKQENLNVVCVPTSFQARQLILQNGLVLSDLDRHPELDVAIDGADEVDSELNLIKGGGGCLAQEKIVAGCAKSFIVIADYRKDSKNFGEQWKKGVPIEVIPMAYVPVIKALQSRFGGVAELRMAVSKAGPVVTDNGNFLLDWKFD--KVHEWKAVNTEIKMIPGDV 218
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Xenopus
Match: ccdc65 (coiled-coil domain containing 65 [Source:Xenbase;Acc:XB-GENE-1002732]) HSP 1 Score: 231.876 bits (590), Expect = 1.059e-75 Identity = 111/205 (54.15%), Postives = 146/205 (71.22%), Query Frame = 2 Query: 8 LKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIP 622 + E K+ A + A+D +V+N Q +GIGSGSTI AV RLA +V +E L V C PTSFQA+ LIL+ L L L+ + ELD+A DGADEVD L +IKGGGGC QEKI+A C K I+IAD KDSK G+ WK+G+PIEVIP+AY + A++++FGG A LR A +K GPVVTDNGNF++DWKF + + W ++ ++ MIP Sbjct: 1 MTEEAKRLAGWAAVDNHVKNNQALGIGSGSTIVHAVNRLAERVKQENLNVVCVPTSFQARQLILQNGLVLSDLDRHPELDVAIDGADEVDSELNLIKGGGGCLAQEKIVAGCAKSFIVIADYRKDSKNFGEQWKKGVPIEVIPMAYVPVIKALQSRFGGVAELRMAVSKAGPVVTDNGNFLLDWKFD--KVHEWKAVNTEIKMIP 203
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Mouse
Match: Rpia (ribose 5-phosphate isomerase A [Source:MGI Symbol;Acc:MGI:103254]) HSP 1 Score: 270.396 bits (690), Expect = 7.029e-90 Identity = 131/236 (55.51%), Postives = 170/236 (72.03%), Query Frame = 2 Query: 2 MSLKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIRTK 709 MS E KK A++ A++ +V+N Q +GIGSGSTI AV+R+A +V +E L + C PTSFQA+ LIL+Y L L L+++ E+D+A DGADEVD L +IKGGGGC QEKI+A + I+IAD KDSK LGD W +GIPIEVIP+AY + A+ KFGGE LR A NK GPVVTDNGNFI+DWKF + + W E++ + M PG+V+TGLFI+MA V+FG DG+V +R K Sbjct: 68 MSKAEEAKKLASHTAVENHVKNNQVLGIGSGSTIVHAVQRIAERVKQENLDLICIPTSFQARQLILQYGLTLSDLDQHPEIDLAIDGADEVDAELNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGDRWHKGIPIEVIPMAYVPVSRAVAQKFGGEVELRMAVNKAGPVVTDNGNFILDWKFD--RVHKWSEVNTAIKMTPGVVDTGLFINMAERVYFGMQDGSVNVREK 301
BLAST of Ribose-5-phosphate isomerase vs. UniProt/SwissProt
Match: sp|P47968|RPIA_MOUSE (Ribose-5-phosphate isomerase OS=Mus musculus OX=10090 GN=Rpia PE=1 SV=2) HSP 1 Score: 270.396 bits (690), Expect = 4.917e-89 Identity = 131/236 (55.51%), Postives = 170/236 (72.03%), Query Frame = 2 Query: 2 MSLKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIRTK 709 MS E KK A++ A++ +V+N Q +GIGSGSTI AV+R+A +V +E L + C PTSFQA+ LIL+Y L L L+++ E+D+A DGADEVD L +IKGGGGC QEKI+A + I+IAD KDSK LGD W +GIPIEVIP+AY + A+ KFGGE LR A NK GPVVTDNGNFI+DWKF + + W E++ + M PG+V+TGLFI+MA V+FG DG+V +R K Sbjct: 68 MSKAEEAKKLASHTAVENHVKNNQVLGIGSGSTIVHAVQRIAERVKQENLDLICIPTSFQARQLILQYGLTLSDLDQHPEIDLAIDGADEVDAELNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGDRWHKGIPIEVIPMAYVPVSRAVAQKFGGEVELRMAVNKAGPVVTDNGNFILDWKFD--RVHKWSEVNTAIKMTPGVVDTGLFINMAERVYFGMQDGSVNVREK 301
BLAST of Ribose-5-phosphate isomerase vs. UniProt/SwissProt
Match: sp|P49247|RPIA_HUMAN (Ribose-5-phosphate isomerase OS=Homo sapiens OX=9606 GN=RPIA PE=1 SV=3) HSP 1 Score: 267.314 bits (682), Expect = 8.377e-88 Identity = 131/236 (55.51%), Postives = 168/236 (71.19%), Query Frame = 2 Query: 2 MSLKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIRTK 709 MS E KK A A++ +V+N Q +GIGSGSTI AV+R+A +V +E L + C PTSFQA+ LIL+Y L L L+ + E+D+A DGADEVD +L +IKGGGGC QEKI+A + I+IAD KDSK LGD W +GIPIEVIP+AY + A+ KFGG LR A NK GPVVTDNGNFI+DWKF + + W E++ + MIPG+V+TGLFI+MA V+FG DG+V +R K Sbjct: 75 MSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQKFGGVVELRMAVNKAGPVVTDNGNFILDWKFD--RVHKWSEVNTAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMREK 308
BLAST of Ribose-5-phosphate isomerase vs. UniProt/SwissProt
Match: sp|Q3T186|RPIA_BOVIN (Ribose-5-phosphate isomerase (Fragment) OS=Bos taurus OX=9913 GN=RPIA PE=2 SV=2) HSP 1 Score: 263.462 bits (672), Expect = 6.316e-87 Identity = 130/236 (55.08%), Postives = 167/236 (70.76%), Query Frame = 2 Query: 2 MSLKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIRTK 709 MS E KK A A++ +V+N Q +GIGSGSTI AV+R+A +V +E L + C PTSFQA+ LIL+Y L L L+ + E+D+A DGADEVD +L +IKGGGGC QEKI+A + I+IAD KDSK LGD W +GIPIEVIP+AY + + KFGG LR A NK GPVVTDNGNFI+DWKF + + W E++ + MIPG+V+TGLFI+MA V+FG DG+V +R K Sbjct: 29 MSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVEQENLKLVCIPTSFQARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGNASRFIVIADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRTVTQKFGGVIELRMAVNKAGPVVTDNGNFILDWKFD--RVHKWSEVNIAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMREK 262
BLAST of Ribose-5-phosphate isomerase vs. UniProt/SwissProt
Match: sp|A2TLM1|RPIA_PIG (Ribose-5-phosphate isomerase OS=Sus scrofa OX=9823 GN=RPIA PE=2 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 3.474e-86 Identity = 129/236 (54.66%), Postives = 167/236 (70.76%), Query Frame = 2 Query: 2 MSLKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIRTK 709 MS E KK A A++ +V+N Q +GIGSGSTI AV+R+A +V +E L + C PTSFQA+ LIL++ L L L+ + E+D+A DGADEVD +L +IKGGGGC QEKI+A + I+IAD KDSK LGD W +GIPIEVIP+AY + + KFGG LR A NK GPVVTDNGNFI+DWKF + + W E++ + MIPG+V+TGLFI+MA V+FG DG+V +R K Sbjct: 71 MSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLICIPTSFQARQLILQHGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGNASRFIVIADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRTVTQKFGGVIELRMAVNKAGPVVTDNGNFILDWKFD--RVHKWSEVNTAITMIPGVVDTGLFINMAERVYFGMQDGSVNMREK 304
BLAST of Ribose-5-phosphate isomerase vs. UniProt/SwissProt
Match: sp|Q551C2|RPIA_DICDI (Ribose-5-phosphate isomerase OS=Dictyostelium discoideum OX=44689 GN=rpiA PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 5.100e-80 Identity = 126/236 (53.39%), Postives = 166/236 (70.34%), Query Frame = 2 Query: 2 MSLKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIE-TKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIRT 706 MSL KK AAY A+D +V++G KIGIGSGSTI +AV+R+ ++ V C PTSFQ+ LI+E L L L ELDI DGADEVDK+ +IKGGGGC LQEKI+AY +KKL+I+AD +K+S ELG+NWK+GIPIEV+P+AY + +E + F LR A NK GPVVTDNGNFI+D +F S N ++ D+ MIPG+VETGLF++M +FG++DGT +++ Sbjct: 1 MSLDNC-KKVAAYKAVDDFVKDGCKIGIGSGSTIKYAVDRIKELGLKN---VICVPTSFQSTQLIVEAGLELSDLSRTPELDITIDGADEVDKDFNLIKGGGGCQLQEKIVAYSSKKLVIVADHTKESTELGENWKKGIPIEVVPMAYVPVMKKLESSSFSLTPKLRMAVNKAGPVVTDNGNFIIDAQFSKPLS-NIPQLAIDIKMIPGVVETGLFVNMTKIAYFGQTDGTCKVKS 231
BLAST of Ribose-5-phosphate isomerase vs. TrEMBL
Match: A0A1A8B7J9 (Ribose 5-phosphate isomerase A (Ribose 5-phosphate epimerase) OS=Nothobranchius furzeri OX=105023 GN=RPIA PE=3 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 1.562e-96 Identity = 138/232 (59.48%), Postives = 173/232 (74.57%), Query Frame = 2 Query: 8 LKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIR 703 + E KK AAY A+D YVQN Q IG+GSGSTI +AV+RLA +V +EKL V C PTSFQA+ LIL++ L L L+ + ELDIA DGADEVD LT+IKGGGGC QEKI+A C K+ +++AD KDSK LG WK+G+PIEVIP+AY + I +FGGE +LR A +K GPVVTDN NFI+DWKF+ GQ NW E++ + MIPG+VETGLF++MA +FG DG+V IR Sbjct: 1 MAEEAKKLAAYAAVDNYVQNNQVIGVGSGSTIVYAVDRLAERVRQEKLNVVCVPTSFQARQLILQHGLTLSDLDRHSELDIAIDGADEVDSELTLIKGGGGCLTQEKIVAGCAKRFVVVADYRKDSKALGQQWKKGVPIEVIPMAYVPVSRMIVRRFGGETVLRMAVSKAGPVVTDNSNFILDWKFEHGQ--NWKEVNTAIKMIPGVVETGLFVNMAERAYFGMEDGSVQIR 230
BLAST of Ribose-5-phosphate isomerase vs. TrEMBL
Match: A0A1A7WV47 (Ribose 5-phosphate isomerase A (Ribose 5-phosphate epimerase) OS=Iconisemion striatum OX=60296 GN=RPIA PE=3 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 2.599e-96 Identity = 139/233 (59.66%), Postives = 173/233 (74.25%), Query Frame = 2 Query: 5 SLKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIR 703 ++ E KK AAY A+D YVQN Q IG+GSGSTI +AV+RLA +V +EKL V C PTSFQA+ LIL++ L L L+ + ELD+A DGADEVD LT+IKGGGGC QEKI+A C K ++IAD KDSK LG WK+G+PIEVIP+AY I I +FGGEA+LR A +K GPVVTDN NFI+DWKF+ S NW E++ + MIPG+VETGLF++MA +FG DG+V IR Sbjct: 39 NMAEEAKKLAAYAAVDNYVQNNQVIGVGSGSTIVYAVDRLAERVRQEKLNVVCVPTSFQARQLILQHGLTLSDLDRHSELDVAIDGADEVDSELTLIKGGGGCLTQEKIVAGCAKHFVVIADYRKDSKALGQQWKKGVPIEVIPMAYVPISRTIARRFGGEAVLRMAVSKAGPVVTDNSNFILDWKFE--HSQNWKEVNTAIKMIPGVVETGLFVNMAERAYFGMEDGSVQIR 269
BLAST of Ribose-5-phosphate isomerase vs. TrEMBL
Match: Q6NXA0 (Rpia protein (Fragment) OS=Danio rerio OX=7955 GN=rpia PE=2 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 3.237e-96 Identity = 138/232 (59.48%), Postives = 173/232 (74.57%), Query Frame = 2 Query: 8 LKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIR 703 + E KK AAY A+D ++QN Q IG+GSGSTI +AV+RLA KV +EKL + C PTSFQA+ LIL++ LPL L+ + ELD+A DGADEVD LT+IKGGGGC QEKI+A C K I+IAD KDSK LG WK+G+P+EVIP+AY + AI +FGGEA+LR A +K GPVVTDN NFI+DWKF+ Q NW E++ + MIPG+VETGLF+ MA V+FG DG+V R Sbjct: 7 MAEEAKKLAAYAAVDNHIQNNQVIGVGSGSTIVYAVDRLAEKVRQEKLNIVCVPTSFQARQLILQHGLPLSDLDRHPELDVAIDGADEVDTALTLIKGGGGCLTQEKIVAGCAKHFIVIADYRKDSKALGQQWKKGVPVEVIPMAYVPVSRAIAHRFGGEAVLRMAVSKAGPVVTDNSNFILDWKFEHAQ--NWKEVNTAIKMIPGVVETGLFVGMAERVYFGMEDGSVKTR 236
BLAST of Ribose-5-phosphate isomerase vs. TrEMBL
Match: B8JI15 (Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) OS=Danio rerio OX=7955 GN=rpia PE=1 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 7.577e-96 Identity = 138/232 (59.48%), Postives = 173/232 (74.57%), Query Frame = 2 Query: 8 LKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIR 703 + E KK AAY A+D ++QN Q IG+GSGSTI +AV+RLA KV +EKL + C PTSFQA+ LIL++ LPL L+ + ELD+A DGADEVD LT+IKGGGGC QEKI+A C K I+IAD KDSK LG WK+G+P+EVIP+AY + AI +FGGEA+LR A +K GPVVTDN NFI+DWKF+ Q NW E++ + MIPG+VETGLF+ MA V+FG DG+V R Sbjct: 41 MAEEAKKLAAYAAVDNHIQNNQVIGVGSGSTIVYAVDRLAEKVRQEKLNIVCVPTSFQARQLILQHGLPLSDLDRHPELDVAIDGADEVDTALTLIKGGGGCLTQEKIVAGCAKHFIVIADYRKDSKALGQQWKKGVPVEVIPMAYVPVSRAIARRFGGEAVLRMAVSKAGPVVTDNSNFILDWKFEHAQ--NWKEVNTAIKMIPGVVETGLFVGMAERVYFGMEDGSVKTR 270
BLAST of Ribose-5-phosphate isomerase vs. TrEMBL
Match: A0A3N0XXM0 (Ribose-5-phosphate isomerase OS=Anabarilius grahami OX=495550 GN=DPX16_10136 PE=3 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 1.538e-95 Identity = 136/232 (58.62%), Postives = 173/232 (74.57%), Query Frame = 2 Query: 8 LKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIR 703 + E KK AAY A+D ++QN Q +G+GSGSTI +AV+RLA +V +EKL + C PTSFQA+ LIL++ LPL L+ + ELD+A DGADEVD LT+IKGGGGC QEKI+A C K I+IAD KDSK LG WK+G+P+EVIP+AY + AI +FGGEA+LR A +K GPVVTDN NFI+DWKF+ Q NW E++ + MIPG+VETGLF+ MA V+FG DG+V R Sbjct: 39 MAEEAKKLAAYAAVDNHIQNNQVVGVGSGSTIVYAVDRLAERVRQEKLNIVCVPTSFQARQLILQHGLPLSDLDRHPELDVAIDGADEVDAALTLIKGGGGCLTQEKIVAGCAKHFIVIADYRKDSKALGQQWKKGVPVEVIPMAYVPVSRAIARRFGGEAVLRMAVSKAGPVVTDNNNFILDWKFEHAQ--NWKEVNTAIKMIPGVVETGLFVGMAERVYFGMEDGSVKTR 268
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Cavefish
Match: rpia (ribose-5-phosphate isomerase [Source:NCBI gene;Acc:103042087]) HSP 1 Score: 287.345 bits (734), Expect = 8.779e-97 Identity = 134/232 (57.76%), Postives = 173/232 (74.57%), Query Frame = 2 Query: 8 LKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIR 703 + E KK AAY A+D ++QN Q +G+GSGSTI +AV+RLA +V +EKL + C PTSFQA+ LIL++ L L L+ + ELD+A DGADEVD +LT+IKGGGGC QEKI+A C K ++IAD KDSK LG WK+G+P+EVIP+AY + I +FGGEA+LR A +K GPVVTDN NFI+DWKF+ Q NW E++ + MIPG+VETGLF+ MA V+FG DG+V IR Sbjct: 60 MAEEAKKLAAYAAVDNHIQNNQIVGVGSGSTIVYAVDRLAERVRQEKLKIICVPTSFQARQLILKHGLSLSDLDRHPELDVAIDGADEVDASLTLIKGGGGCLTQEKIVAGCAKHFVVIADYRKDSKALGQQWKKGVPVEVIPMAYVPVSRTIARRFGGEAVLRMAVSKAGPVVTDNSNFILDWKFEHAQ--NWKEVNTAIKMIPGVVETGLFVGMAERVYFGMEDGSVKIR 289
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Cavefish
Match: ENSAMXT00000041945.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02001650.1:547:7606:1 gene:ENSAMXG00000035270.1 transcript:ENSAMXT00000041945.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 198.364 bits (503), Expect = 9.070e-63 Identity = 109/216 (50.46%), Postives = 137/216 (63.43%), Query Frame = 2 Query: 59 VQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQ-AKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIR 703 V N Q +G+GSGSTI +AV+RL I + C Q A+ LIL++ L L L+ + ELD+A DGADEVD +LT+IKGGGGC QEKI+A C K ++IAD KDSK LG Q I +FGGEA+LR A +K GPVVTDN NFI+DWKF+ Q NW E++ + MIPG+VETGLF+ MA V+FG DG+V IR Sbjct: 39 VINNQIVGVGSGSTIVYAVDRLGKFYI-----LLCVFLCKQCARQLILKHGLSLSDLDRHPELDVAIDGADEVDASLTLIKGGGGCLTQEKIVAGCAKHFVVIADYRKDSKALG-------------------QQTIARRFGGEAVLRMAVSKAGPVVTDNSNFILDWKFEHAQ--NWKEVNTAIKMIPGVVETGLFVGMAERVYFGMEDGSVKIR 228
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Yeast
Match: RKI1 (Ribose-5-phosphate ketol-isomerase; catalyzes the interconversion of ribose 5-phosphate and ribulose 5-phosphate in the pentose phosphate pathway; participates in pyridoxine biosynthesis [Source:SGD;Acc:S000005621]) HSP 1 Score: 201.445 bits (511), Expect = 1.964e-64 Identity = 108/242 (44.63%), Postives = 161/242 (66.53%), Query Frame = 2 Query: 14 EIGKKAAAYFAIDKYVQ--NGQKIGIGSGSTITFAVERLAHKVIEEKL-----TVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDS-KELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAI-LRQAAN-KMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIRTK 709 E K+AAAY A+D+ ++ + + IGIGSGST+ + ER+ + + K C PT FQ++ LIL+ KL L S+E+ +DIAFDGADEVD+NL +IKGGG C QEK+++ K I++AD K S K LG NW++G+PIE++P +Y ++N + + E + +RQ + K GPVVTDN NFI+D F G+ ++ ++ R++ ++ G+VETGLFID AS+ +FG SDG+V + K Sbjct: 19 EDAKRAAAYRAVDENLKFDDHKIIGIGSGSTVVYVAERIGQYLHDPKFYEVASKFICIPTGFQSRNLILDNKLQLGSIEQYPRIDIAFDGADEVDENLQLIKGGGACLFQEKLVSTSAKTFIVVADSRKKSPKHLGKNWRQGVPIEIVPSSYVRVKNDLLEQLHAEKVDIRQGGSAKAGPVVTDNNNFIIDADF--GEISDPRKLHREIKLLVGVVETGLFIDNASKAYFGNSDGSVEVTEK 258
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Nematostella
Match: EDO31708 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SX61]) HSP 1 Score: 278.1 bits (710), Expect = 1.804e-94 Identity = 132/230 (57.39%), Postives = 174/230 (75.65%), Query Frame = 2 Query: 14 EIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIR 703 E GKKAAA +A++K+V+NG +GIGSGST+ +AVERLA +V++EKL V C PTSFQA+ LI E KL L LE N ELD+A DGADEVD NLT+IKGGGGC QEKI+A C K L+IIAD+ KDSK+LG+ W +G+P+EV+P AY+ + +E K G +LR A K GPVVTDNGNFI+D F Q +W +++ DL++IPG++ETGLF++M + V FG+ DG++ R Sbjct: 2 EAGKKAAAVYAVNKFVKNGHVLGIGSGSTVVYAVERLAKRVMKEKLEVVCVPTSFQAQQLITENKLVLSDLERNPELDVAIDGADEVDANLTLIKGGGGCLTQEKIVASCAKTLVIIADDRKDSKQLGEKWSKGVPVEVVPFAYRPVMLKME-KMGLSPVLRMAKAKAGPVVTDNGNFIIDVGFSKPQ--DWNKLNTDLNLIPGVLETGLFVNMTNHVVFGKEDGSIATR 228
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Medaka
Match: rpia (ribose 5-phosphate isomerase A [Source:NCBI gene;Acc:101166762]) HSP 1 Score: 283.493 bits (724), Expect = 1.428e-95 Identity = 130/232 (56.03%), Postives = 175/232 (75.43%), Query Frame = 2 Query: 8 LKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIR 703 + E KK AAY A+D +VQN Q +G+GSGSTI +AV+RLA +V++EKL + C PTSFQA+ LIL++ L L L+ + ELD+A DGADEVD +LT+IKGGGGC QEKI+A C K ++IAD KDS+ LG W++GIPIEVIP+A+ I I +FGGE LR A +K GPVVTDN NF++DWKFK +++NW +++ ++ MIPG+VETGLF++MA +FG DG+V +R Sbjct: 37 MAEEAKKLAAYAAVDNHVQNNQVVGVGSGSTIVYAVDRLAERVMQEKLNIVCVPTSFQARQLILQHGLALSDLDRHPELDVAIDGADEVDADLTLIKGGGGCLTQEKIVAGCAKSFVVIADYRKDSEALGQQWRKGIPIEVIPMAWVPISRVIARRFGGEVNLRMAVSKAGPVVTDNSNFLLDWKFK--EAHNWKKVNTEIKMIPGVVETGLFVNMAERAYFGMEDGSVKVR 266
BLAST of Ribose-5-phosphate isomerase vs. Planmine SMEST
Match: SMESG000004984.1 (SMESG000004984.1) HSP 1 Score: 487.263 bits (1253), Expect = 1.062e-176 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 2 Query: 2 MSLKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIRTKNN 715 MSLKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIRTKNN Sbjct: 1 MSLKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLTVSCAPTSFQAKLLILEYKLPLISLEENYELDIAFDGADEVDKNLTMIKGGGGCHLQEKIIAYCTKKLIIIADESKDSKELGDNWKRGIPIEVIPLAYKIIQNAIETKFGGEAILRQAANKMGPVVTDNGNFIVDWKFKAGQSNNWVEIDRDLHMIPGMVETGLFIDMASEVFFGRSDGTVFIRTKNN 238 The following BLAST results are available for this feature:
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 1
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 2
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 2
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 1
BLAST of Ribose-5-phosphate isomerase vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Ribose-5-phosphate isomerase vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 2
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of Ribose-5-phosphate isomerase vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 1
BLAST of Ribose-5-phosphate isomerase vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30018061 ID=SMED30018061|Name=Ribose-5-phosphate isomerase|organism=Schmidtea mediterranea sexual|type=transcript|length=860bpback to top protein sequence of SMED30018061-orf-1 >SMED30018061-orf-1 ID=SMED30018061-orf-1|Name=SMED30018061-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=241bp MSLKEIGKKAAAYFAIDKYVQNGQKIGIGSGSTITFAVERLAHKVIEEKLback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
|