SMED30018004
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30018004 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 12
Homology
BLAST of SMED30018004 vs. Ensembl Human
Match: BYSL (bystin like [Source:HGNC Symbol;Acc:HGNC:1157]) HSP 1 Score: 121.709 bits (304), Expect = 6.971e-29 Identity = 88/303 (29.04%), Postives = 160/303 (52.81%), Query Frame = -2 Query: 177 INEEDKIALEKFLNP-----EIVTDMI-EGMAEARKEV----SELMGFDDIEEIDLADVEGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAV----QVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDNI-TGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSV 1040 ++ ED+ A+E F+N + D+I E + E + EV SE+ GF + ++D + E + +R+++ Y+ G+L PK K++P +++W + + W++ A+ ++F+ ++ + + ++ LLP VR+ +AE+KRL+ LY L+ ALF+ + +L+P C+ T REA I+G+II +I + ++ AM + MEYS I LR LDKKY LPY ++ V +F + ++P++W Q L + Y L + L L R+ H +++P + Sbjct: 125 VDPEDERAIEMFMNKNPPARRTLADIIMEKLTEKQTEVETVMSEVSGFP-MPQLD----PRVLEVYRGVREVLSKYRSGKL-PKAFKIIPALSNWEQILYVTEPEAWTAAAMYQATRIFASNLKER---MAQRFYNLVLLPRVRDDVAEYKRLNFHLYMALKKALFKPGAWFKGILIPLCESGTCTLREAIIVGSIITKCSIPVLHSSAAM-LKIAEMEYSGANSIFLRLLLDKKYALPYRVLDALVFHFLGFRTEKRELPVLWHQCLLTLVQRYKADLATDQKEALLELLRLQPHPQLSPEI 417
BLAST of SMED30018004 vs. Ensembl Human
Match: BYSL (bystin like [Source:HGNC Symbol;Acc:HGNC:1157]) HSP 1 Score: 61.2326 bits (147), Expect = 3.932e-10 Identity = 46/167 (27.54%), Postives = 92/167 (55.09%), Query Frame = -2 Query: 582 INEEDKIALEKFLNP-----EIVTDMI-EGMAEARKEV----SELMGFDDIEEIDLADVEGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAV----QVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFR 1040 ++ ED+ A+E F+N + D+I E + E + EV SE+ GF + ++D + E + +R+++ Y+ G+L PK K++P +++W + + W++ A+ ++F+ ++ + + ++ LLP VR+ +AE+KRL+ LY L+ ALF+ Sbjct: 16 VDPEDERAIEMFMNKNPPARRTLADIIMEKLTEKQTEVETVMSEVSGFP-MPQLD----PRVLEVYRGVREVLSKYRSGKL-PKAFKIIPALSNWEQILYVTEPEAWTAAAMYQATRIFASNLKERMAQR---FYNLVLLPRVRDDVAEYKRLNFHLYMALKKALFK 173
BLAST of SMED30018004 vs. Ensembl Celegans
Match: byn-1 (Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]) HSP 1 Score: 112.079 bits (279), Expect = 4.375e-26 Identity = 84/310 (27.10%), Postives = 153/310 (49.35%), Query Frame = -2 Query: 147 INEEDKIALEKFLNPEIVT-----DMIEGMAEARKEVSEL-MGFDDIEEIDLADVEG-LAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAV----QVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDN-ITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSVLAFLRMKSSD 1040 ++ D+ L +FL + + D+I+ EA++ +EL + D E ++ D++ + E + I + M Y+ G++ PK K++P++ +W + W++ A+ ++F+ + K + ++ LLP +R+ I E K+L+ LY+ L A+++ F L+LP + T REA I +++ I + +A AM + MEY+ + LRA +DKKY LPY ++ V +F + E MP++W Q L Y LN E + L R H H ++P + L K ++ Sbjct: 125 LDPRDEADLARFLKKDAIQMSTLYDIIQAKIEAKQNDAELALSQVDPNEFNMRDMDPEVVEMYEQIGQYMSKYRSGKV-PKAFKIIPKMINWEQILFLTKPETWTAAAMYQATRLFASNM---NPKMCQRFYTLVLLPRLRDDIDEFKKLNYHLYQALCKAIYKPAAFFKGLILPLLESGTCTLREAVIFSSVLTKVPIPIFHSAAAM-LRIAEMEYTGANSVFLRALIDKKYALPYRAVDGVVNHFIRLKTDERDMPVLWHQCLLALCQRYKNDLNAEQKAAIYELIRFHGHYLISPEIRRELESKETE 429
BLAST of SMED30018004 vs. Ensembl Fly
Match: bys (gene:FBgn0010292 transcript:FBtr0071090) HSP 1 Score: 118.242 bits (295), Expect = 4.977e-28 Identity = 89/315 (28.25%), Postives = 157/315 (49.84%), Query Frame = -2 Query: 153 INEEDKIALEKFLNPE------------IVTDMIEGMAEARKEVSELMGFDDIEEIDLADVEGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAV----QVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDD-NITGREADILGNIIKSSTIKLDVAAPAMTCLMN--NMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSVLAFLRMKS 1040 ++E+D A E+F P I+ + E A+ ++S+ G IEEID + E + +R ++ Y+ G++ PK K++P++ +W + + NWS+ A+ ++F + + ++ LLP VR+ + E+K+L+ LY L+ ALF+ FM ++LP + + T REA I G+++ S+I + + CL+ M YS I +R FLDK+Y LPY ++ V +F + + ++P++W Q+L F Y ++ E L L + H K+TP V L+ S Sbjct: 104 MDEDDVAAFERFQQPAQEGKRTLHLSKMIMQKIQEKEADIHTKISD-EGSLKIEEID----PKVKEMYEGVRDVLKRYRSGKI-PKAFKIIPKLRNWEQILFITEPHNWSAAAMFQGTRIFCSVL---SQAMAQRFYNLVLLPRVRDDLCEYKKLNMHLYNALKRALFKPAAFMKGIILPLLEGGDCTLREAIIFGSVVARSSIPV---LHSSACLLKICEMAYSGANSIFIRYFLDKRYALPYRVVDAAVFHFLRFENDKRELPVLWHQSLLTFAQRYKNDISSEQRDALLQLLKKKSHFKITPDVRRELQAAS 406
BLAST of SMED30018004 vs. Ensembl Zebrafish
Match: bysl (bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]) HSP 1 Score: 123.25 bits (308), Expect = 2.219e-29 Identity = 86/299 (28.76%), Postives = 157/299 (52.51%), Query Frame = -2 Query: 177 INEEDKIALEKFL--NPEI---VTDMI-EGMAEARKEVSELMGFDDIEEIDLADVEGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAV----QVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDD-NITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSV 1040 ++ ED+ A++ F+ NP + + D+I E + E + EV ++ + D + E + + K++ Y+ G+L PK K++P +++W + + WS+ A+ ++FS ++ + + ++ LLP +R+ IAE+KRL+ LY L+ ALF+ + +LLP C+ + T REA I+G+II +I + ++ AM L MEY+ I LR LDKKY LP+ ++ V +F + +P++W Q+L + Y L+ E L L + H H +++ + Sbjct: 152 VDPEDEQAIQMFMSKNPPMRRTLADIIMEKITEKQTEVGTVLSEVSGHAMPQMDPR-VVEVYRGVSKVLSKYRSGKL-PKAFKIIPALSNWEQVLYLTEPETWSAAAMYQATRIFSSNLKERMAQR---FYNLVLLPRIRDDIAEYKRLNFHLYSALKKALFKPAAWFKGILLPLCESGSCTLREAIIIGSIITKCSIPVLHSSAAMLKL-AEMEYNGANSIFLRLMLDKKYALPFRVLDALVAHFLSFRTDKRILPVLWHQSLLTLVQRYKADLSSEQKEALLELLKAHTHPQISSEI 444
BLAST of SMED30018004 vs. Ensembl Xenopus
Match: ugp2 (UDP-glucose pyrophosphorylase 2 [Source:Xenbase;Acc:XB-GENE-974407]) HSP 1 Score: 124.79 bits (312), Expect = 5.348e-30 Identity = 89/296 (30.07%), Postives = 155/296 (52.36%), Query Frame = -2 Query: 186 INEEDKIALEKFLN--PEI---VTDMI-EGMAEARKEVSELMGFDDIEEIDLADVEGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAV----QVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDNI-TGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVT 1040 IN ED+ A+E F+N P + + D+I E + E + EV +M + D L E K +++++ Y+ G+L PK K++P +++W + + W++ A+ ++FS + + + Y+ LLP VR+ IAE+KRL+ LY L+ ALF+ + +L+P C+ T REA I+G+II +I + ++ AM + MEY+ I LR +DKKY LP+ ++ V +F + +P++W Q+L Y ++ E L L R+H H +++ Sbjct: 129 INPEDEKAMEMFMNKNPPLRRTLADIIMEKITEKQTEVETMMSEVSGRPMPQLDPRVL-EVYKGVKEVLSSYRSGKL-PKAFKIVPALSNWEQILYITEPETWTAAAMYQATRIFSSNL---SERMAQRYYNLVLLPRVRDDIAEYKRLNFHLYMALKKALFKPGAWFKGILIPLCESGTCTLREAVIIGSIITKCSIPVLHSSAAMLKIAE-MEYNGANSIFLRLLIDKKYALPFRVLDALVFHFLAFRSDKRTLPVLWHQSLLTLCQRYKDDMSSEQKEALLDLLRIHTHPQIS 418
BLAST of SMED30018004 vs. Ensembl Mouse
Match: Bysl (bystin-like [Source:MGI Symbol;Acc:MGI:1858419]) HSP 1 Score: 125.946 bits (315), Expect = 1.990e-30 Identity = 92/303 (30.36%), Postives = 161/303 (53.14%), Query Frame = -2 Query: 177 INEEDKIALEKFLN--PEI---VTDMI-EGMAEARKEV----SELMGFDDIEEIDLADVEGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAV----QVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDN-ITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSV 1040 ++ ED+ A+E F+N P + + D+I E + E + EV SE+ GF + ++D + E + +R+++ Y+ G+L PK KV+P +++W + + W++ A+ ++F+ ++ + + ++ LLP VR+ IAE+KRL+ LY L+ ALF+ + +L+P C+ T REA I+G+II +I + ++ AM + MEYS I LR LDKKY LPY ++ V +F + ++P++W Q L Y L E L L R+ H +++P + Sbjct: 124 VDPEDERAIEMFMNKNPPVRRTLADIIMEKLTEKQTEVETVMSEVSGFP-MPQLD----PRVLEVYRGVREVLCKYRSGKL-PKAFKVIPALSNWEQILYVTEPEAWTAAAMYQATRIFASNLKER---MAQRFYNLVLLPRVRDDIAEYKRLNFHLYMALKKALFKPGAWFKGILIPLCESGTCTLREAIIVGSIITKCSIPVLHSSAAM-LKIAEMEYSGANSIFLRLLLDKKYALPYRVLDALVFHFLAFRTEKRQLPVLWHQCLLTLAQRYKADLATEQKEALLELLRLQPHPQLSPEI 416
BLAST of SMED30018004 vs. UniProt/SwissProt
Match: sp|A9UNU6|BYST_MONBE (Bystin OS=Monosiga brevicollis OX=81824 GN=bysl PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 4.514e-33 Identity = 92/315 (29.21%), Postives = 166/315 (52.70%), Query Frame = -2 Query: 132 INEEDKIALEKFLNPE-----IVTDMI-EGMAEARKEVSELMGFDDIEEIDLADVEGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSST----AVQVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCD-DNITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSV-LAFLRMKSSDQAMDI 1040 I+E D++AL F+ E + D+I E + R EV+ + E++ + E + + +++ Y+ G+L PK K++P++ +W + + NW++ A ++F+ ++ K + ++ LLP VR+ IAE+KRL+ LY+ ++ A+F+ F LLP C+ + T REA I+G I+ +I + ++ AM M M YS I LR LDKKY+LP+ ++ V +F++ + ++P++W Q L +F+ Y + E R L + R H H +TP + ++ KS D+ M + Sbjct: 104 IDEHDEVALRAFMPAEPAQRRTLADIIMEKIQGKRTEVASQVSQTGPRELN----PKVIEVYQGVGQVLSRYRSGKL-PKAFKIIPRLKNWEEIVYITEPENWTAASMYAATRLFASNLKEKMAQR---FYNLILLPRVRDDIAEYKRLNFHLYQAIKKAIFKPGAFFKGFLLPLCEAGDCTLREAVIIGGILVRKSIPVLHSSAAM-LKMAEMPYSGATSIFLRVLLDKKYSLPFRVVDAVVAHFYRFNADHRQLPVLWHQCLLVFVQRYKEDITSEQKRALLDVLRSHNHYAITPEIRRELVQSKSRDREMPL 409
BLAST of SMED30018004 vs. UniProt/SwissProt
Match: sp|A7S7F2|BYST_NEMVE (Bystin OS=Nematostella vectensis OX=45351 GN=bysl PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.098e-32 Identity = 83/246 (33.74%), Postives = 133/246 (54.07%), Query Frame = -2 Query: 177 EGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWN--FFMEQLDFPNWSSTAV----QVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDD-NITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSV 893 E L + K + +++ Y+ G+L PK K +P + +W F+ + D WS+ A+ ++F + AK + +F LLP +++ IAE+KRL+ LY L+ ALF+ F +LLP C+ N + REA I+ +++ +TI + + + A+ + M YS I LR DKKY LPY I+ V +F + + +P++W Q L F+ Y ++ E L LCRVH HDK+TP V Sbjct: 171 ERLVKVFKGVGEILKKYRSGKL-PKAFKFIPSLTNWEEVLFITEPD--EWSAAALFQATKIFVSNLNAKMAQR---FFNLVLLPRIQDDIAEYKRLNYHLYMALKKALFKPAAFFKGILLPMCESGNCSLREAIIISSVLAKTTIPV-LHSSAVILKIAEMNYSGANSIFLRTLFDKKYALPYRVIDAAVYHFLRFLTDKRTLPVLWHQCLLTFVQRYKEDISSEQKEALMELCRVHVHDKITPEV 409
BLAST of SMED30018004 vs. UniProt/SwissProt
Match: sp|O54825|BYST_MOUSE (Bystin OS=Mus musculus OX=10090 GN=Bysl PE=1 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 1.392e-29 Identity = 92/303 (30.36%), Postives = 161/303 (53.14%), Query Frame = -2 Query: 177 INEEDKIALEKFLN--PEI---VTDMI-EGMAEARKEV----SELMGFDDIEEIDLADVEGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAV----QVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDN-ITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSV 1040 ++ ED+ A+E F+N P + + D+I E + E + EV SE+ GF + ++D + E + +R+++ Y+ G+L PK KV+P +++W + + W++ A+ ++F+ ++ + + ++ LLP VR+ IAE+KRL+ LY L+ ALF+ + +L+P C+ T REA I+G+II +I + ++ AM + MEYS I LR LDKKY LPY ++ V +F + ++P++W Q L Y L E L L R+ H +++P + Sbjct: 124 VDPEDERAIEMFMNKNPPVRRTLADIIMEKLTEKQTEVETVMSEVSGFP-MPQLD----PRVLEVYRGVREVLCKYRSGKL-PKAFKVIPALSNWEQILYVTEPEAWTAAAMYQATRIFASNLKER---MAQRFYNLVLLPRVRDDIAEYKRLNFHLYMALKKALFKPGAWFKGILIPLCESGTCTLREAIIVGSIITKCSIPVLHSSAAM-LKIAEMEYSGANSIFLRLLLDKKYALPYRVLDALVFHFLAFRTEKRQLPVLWHQCLLTLAQRYKADLATEQKEALLELLRLQPHPQLSPEI 416
BLAST of SMED30018004 vs. UniProt/SwissProt
Match: sp|Q80WL2|BYST_RAT (Bystin OS=Rattus norvegicus OX=10116 GN=Bysl PE=1 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 3.650e-29 Identity = 90/303 (29.70%), Postives = 160/303 (52.81%), Query Frame = -2 Query: 177 INEEDKIALEKFLN--PEI---VTDMI-EGMAEARKEV----SELMGFDDIEEIDLADVEGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAV----QVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDN-ITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSV 1040 ++ ED+ A+E F+N P + + D+I E + E + EV SE+ GF + ++D + E + +R+++ Y+ G + PK K++P +++W + + W++ A+ ++F+ ++ + + ++ LLP VR+ IAE+KRL+ LY L+ ALF+ + +L+P C+ T REA I+G+II +I + ++ AM + MEYS I LR LDKKY LPY ++ V +F + ++P++W Q L Y L E L L R+ H +++P + Sbjct: 124 VDPEDERAIEMFMNKNPPVRRTLADIIMEKLTEKQTEVETVMSEVSGFP-MPQLD----PRVLEVYRGVREVLCKYRSG-ILPKAFKIIPALSNWEQILYVTEPEAWTAAAMYQATRIFASNLKERMAQR---FYNLVLLPRVRDDIAEYKRLNFHLYMALKKALFKPGAWFKGILIPLCESGTCTLREAIIVGSIISKCSIPVLHSSAAMLKI-AEMEYSGASSIFLRLLLDKKYALPYRVLDALVFHFLAFRTEKRQLPVLWHQCLLTLAQRYKADLATEQKEALLELLRLQPHPQLSPEI 416
BLAST of SMED30018004 vs. UniProt/SwissProt
Match: sp|Q5E9N0|BYST_BOVIN (Bystin OS=Bos taurus OX=9913 GN=BYSL PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.638e-29 Identity = 90/303 (29.70%), Postives = 160/303 (52.81%), Query Frame = -2 Query: 177 INEEDKIALEKFLNP-----EIVTDMI-EGMAEARKEV----SELMGFDDIEEIDLADVEGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAV----QVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDNI-TGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSV 1040 ++ ED+ A+E F+N + D+I E + E + EV SE+ GF + ++D + E + +R+++ Y+ G+L PK K++P +++W + + W++ A+ ++F+ ++ + + ++ LLP VR+ IAE+KRL+ LY L+ ALF+ + +L+P C+ T REA I+G+II +I + ++ AM + MEYS I LR LDKKY LPY ++ V +F + ++P++W Q L + Y L E L L R+ H +++P + Sbjct: 123 VDPEDERAIEMFMNQNPPARRTLADIIMEKLTEKQTEVETVMSEVSGFP-VPQLD----PRVLEVYRGVREVLSKYRSGKL-PKAFKIIPALSNWEQILYITEPEAWTAAAMYQATRIFASNLKER---MAQRFYNLVLLPRVRDDIAEYKRLNFHLYMALKKALFKPGAWFKGILIPLCESGTCTLREAIIVGSIITKCSIPVLHSSAAM-LKIAEMEYSGANSIFLRLLLDKKYALPYRVLDALVFHFLGFRTEKRELPVLWHQCLLTLVQRYKADLATEQKEALLELLRLQPHPQLSPEI 415
BLAST of SMED30018004 vs. TrEMBL
Match: A0A267EIE9 (Uncharacterized protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig022562g2 PE=4 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 5.969e-41 Identity = 99/296 (33.45%), Postives = 161/296 (54.39%), Query Frame = -2 Query: 147 MAEARKEVSE--LMGFDDIEEIDLADV-----EGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAVQVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDNITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYF-----HKASEI--EGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSVLAFL--------RMKSSD 968 +AE R E+ E + G E + V + + EH + R ++ Y+ G+L PK VK LP + W +E LD +W++ A+ + AKG +F+ +LLP R+ IAE++RL+ LY L+ ALFR+REF LLLPW ++I+ EA I+G +++ +I + AAPA+ L+ + YS R I++R L+KKYNLP + + +F A + +G++P++W Q L + Y L+ + + L LCR H+H ++TP+V L RM+++D Sbjct: 117 IAEKRTEIDEELVSGVGGGSEAGASRVSSCLPDSVREHFESCRAVLSQYRSGKL-PKPVKQLPHFSQWQELVELLDPNSWTAAAMCAVTKYFAAKGKTQALQFFQGYLLPRCRDDIAEYRRLNFHLYSALRKALFRQREFFCGLLLPWARESISLPEATIIGGLLRRVSIPVKYAAPALHMLL-QLPYSGGRAILIRVLLEKKYNLPDPVLGQALAHFVAMETDSADHLNEDGRLPVLWHQALLALVERYGDYLSGDERQRLLRLCRQHQHPEITPAVRQALGALQQRDARMETAD 410
BLAST of SMED30018004 vs. TrEMBL
Match: A0A1I8GTL9 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 8.354e-41 Identity = 95/278 (34.17%), Postives = 154/278 (55.40%), Query Frame = -2 Query: 177 MAEARKEVSE--LMGFDDIEEIDLADV-----EGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAVQVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDNITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYF-----HKASEI--EGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSV 968 +AE R E+ E + G E + V + + EH + R ++ Y+ G+L PK VK LP + W +E LD +W++ A+ + AKG +F+ +LLP R+ IAE++RL+ LY L+ ALFR+REF LLLPW ++I+ EA I+G +++ +I + AAPA+ L+ + YS R I++R L+KKYNLP + + +F A + +G++P++W Q L + Y L+ + + L LCR H+H ++TP+V Sbjct: 136 IAEKRTEIDEELVSGVGGGSEAGASRVSSCLPDSVREHFESCRAVLSQYRSGKL-PKPVKQLPHFSQWQELVELLDPNSWTAAAMCAVTKYFAAKGKTQALQFFQGYLLPRCRDDIAEYRRLNFHLYSALRKALFRQREFFCGLLLPWARESISLPEATIIGGLLRRVSIPVKYAAPALHMLL-QLPYSGGRAILIRVLLEKKYNLPDPVLGQALAHFVAMETDSADHLNEDGRLPVLWHQALLALVERYGDYLSGDERQRLLRLCRQHQHPEITPAV 411
BLAST of SMED30018004 vs. TrEMBL
Match: A0A1I8GL83 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 9.687e-41 Identity = 95/278 (34.17%), Postives = 154/278 (55.40%), Query Frame = -2 Query: 177 MAEARKEVSE--LMGFDDIEEIDLADV-----EGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAVQVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDNITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYF-----HKASEI--EGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSV 968 +AE R E+ E + G E + V + + EH + R ++ Y+ G+L PK VK LP + W +E LD +W++ A+ + AKG +F+ +LLP R+ IAE++RL+ LY L+ ALFR+REF LLLPW ++I+ EA I+G +++ +I + AAPA+ L+ + YS R I++R L+KKYNLP + + +F A + +G++P++W Q L + Y L+ + + L LCR H+H ++TP+V Sbjct: 136 IAEKRTEIDEELVSGVGGGSEAGASRVSSCLPDSVREHFESCRAVLSQYRSGKL-PKPVKQLPHFSQWQELVELLDPNSWTAAAMCAVTKYFAAKGKTQALQFFQGYLLPRCRDDIAEYRRLNFHLYSALRKALFRQREFFCGLLLPWARESISLPEATIIGGLLRRVSIPVKYAAPALHMLL-QLPYSGGRAILIRVLLEKKYNLPDPVLGQALAHFVAMETDSADHLNEDGRLPVLWHQALLALVERYGDYLSGDERQRLLRLCRQHQHPEITPAV 411
BLAST of SMED30018004 vs. TrEMBL
Match: A0A1I8GG71 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.069e-40 Identity = 95/278 (34.17%), Postives = 154/278 (55.40%), Query Frame = -2 Query: 177 MAEARKEVSE--LMGFDDIEEIDLADV-----EGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAVQVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDNITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYF-----HKASEI--EGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSV 968 +AE R E+ E + G E + V + + EH + R ++ Y+ G+L PK VK LP + W +E LD +W++ A+ + AKG +F+ +LLP R+ IAE++RL+ LY L+ ALFR+REF LLLPW ++I+ EA I+G +++ +I + AAPA+ L+ + YS R I++R L+KKYNLP + + +F A + +G++P++W Q L + Y L+ + + L LCR H+H ++TP+V Sbjct: 136 IAEKRTEIDEELVSGVGGGSEAGASRVSSCLPDSVREHFESCRAVLSQYRSGKL-PKPVKQLPHFSQWQELVELLDPNSWTAAAMCAVTKYFAAKGKTQALQFFQGYLLPRCRDDIAEYRRLNFHLYSALRKALFRQREFFCGLLLPWARESISLPEATIIGGLLRRVSIPVKYAAPALHMLL-QLPYSGGRAILIRVLLEKKYNLPDPVLGQALAHFVAMETDSADHLNEDGRLPVLWHQALLALVERYGDYLSGDERQRLLRLCRQHQHPEITPAV 411
BLAST of SMED30018004 vs. TrEMBL
Match: A0A267EMR7 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig022562g1 PE=4 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.276e-40 Identity = 99/296 (33.45%), Postives = 161/296 (54.39%), Query Frame = -2 Query: 147 MAEARKEVSE--LMGFDDIEEIDLADV-----EGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAVQVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDNITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYF-----HKASEI--EGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSVLAFL--------RMKSSD 968 +AE R E+ E + G E + V + + EH + R ++ Y+ G+L PK VK LP + W +E LD +W++ A+ + AKG +F+ +LLP R+ IAE++RL+ LY L+ ALFR+REF LLLPW ++I+ EA I+G +++ +I + AAPA+ L+ + YS R I++R L+KKYNLP + + +F A + +G++P++W Q L + Y L+ + + L LCR H+H ++TP+V L RM+++D Sbjct: 165 IAEKRTEIDEELVSGVGGGSEAGASRVSSCLPDSVREHFESCRAVLSQYRSGKL-PKPVKQLPHFSQWQELVELLDPNSWTAAAMCAVTKYFAAKGKTQALQFFQGYLLPRCRDDIAEYRRLNFHLYSALRKALFRQREFFCGLLLPWARESISLPEATIIGGLLRRVSIPVKYAAPALHMLL-QLPYSGGRAILIRVLLEKKYNLPDPVLGQALAHFVAMETDSADHLNEDGRLPVLWHQALLALVERYGDYLSGDERQRLLRLCRQHQHPEITPAVRQALGALQQRDARMETAD 458
BLAST of SMED30018004 vs. Ensembl Cavefish
Match: bysl (bystin like [Source:NCBI gene;Acc:103046097]) HSP 1 Score: 121.324 bits (303), Expect = 5.312e-29 Identity = 84/305 (27.54%), Postives = 158/305 (51.80%), Query Frame = -2 Query: 186 INEEDKIALEKFLN--PEI---VTDMI-EGMAEARKEVSELMGFDDIEEIDLADVEGLA---------EHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAV----QVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDNI-TGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVT 1040 ++ +D+ A++ F+N P + + D+I E + E + EV +M ++V G+ E + + K++ Y+ G+L PK K++P +++W + D W++ A+ ++FS ++ + + ++ LLP +R+ IAE+KRL+ LY +L+ ALF+ + +L+P C+ T REA I+G+II +I + ++ AM L MEY+ I LR +DKKY LP+ ++ V +F + +P++W Q+L + Y L+ E L L ++ H +++ Sbjct: 121 VDPDDEKAIQMFMNKNPPVRRTLADIIMEKLTEKQTEVGTVM----------SEVSGMPNPQLDPRVIEVYRGVSKVLCRYRSGKL-PKAFKIIPALSNWEQVLYLTDPEKWTAAAMYQATRIFSANLKER---MAQRFYNLVLLPRIRDDIAEYKRLNFHLYGSLKKALFKPGAWFKGILIPLCESGTCTLREAIIIGSIITKCSIPVLHSSAAMLKLAE-MEYNGANSIFLRLLMDKKYALPFRVLDALVAHFLSFRSEKRTLPVLWHQSLLTLVQRYKADLSSEQKGALLELLKIQNHSQIS 410
BLAST of SMED30018004 vs. Ensembl Sea Lamprey
Match: bysl (bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]) HSP 1 Score: 137.117 bits (344), Expect = 8.561e-36 Identity = 94/299 (31.44%), Postives = 157/299 (52.51%), Query Frame = -2 Query: 177 INEEDKIALEKFLNP-----EIVTDMI-EGMAEARKEVSELMGFDDIEEIDLADVEGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAV----QVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDN-ITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSV 1040 ++ ED+ A+E F+N + + D+I E + E + EV+ + + D L E K +R+++ Y+ G+L PK K++P +++W + + +WS+ AV ++F+ ++ + + +F LLP VR+ IAE+KRL+ LY L+ ALF+ + +LLP C+ T REA I+G+I+ S+I + + + A + MEYS + LR FLDKKY LPY ++ V +F + +P++W Q L + Y L+ E L L +VH H VT V Sbjct: 34 VDAEDERAIEMFMNKNPPARQTLADIIMEKITEKQTEVASALSEATGRPMPALDPRVL-EVYKGVREILTKYRSGKL-PKAFKIIPALSNWEQILYVTEPESWSAAAVYQATRIFTSNLKERMAQR---FFNLVLLPRVRDDIAEYKRLNFHLYMALKKALFKPGAWFKGILLPLCESGTCTLREAIIVGSILSKSSIPV-LHSSAALLKIAEMEYSGANSVFLRLFLDKKYALPYRVLDALVSHFLRFRSDRRTLPVLWHQALLVLTQRYKEDLSSEQKEALLELIKVHGHPAVTGEV 326
BLAST of SMED30018004 vs. Ensembl Yeast
Match: ENP1 (Protein associated with U3 and U14 snoRNAs; required for pre-rRNA processing and 40S ribosomal subunit synthesis; localized in the nucleus and concentrated in the nucleolus; human BYSL functionally complements the heat sensitivity of an enp1 ts mutant [Source:SGD;Acc:S000000451]) HSP 1 Score: 75.8702 bits (185), Expect = 5.759e-15 Identity = 63/278 (22.66%), Postives = 123/278 (44.24%), Query Frame = -2 Query: 135 LADVEGLAEHLKVIR------KLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSS----TAVQVFSDQVRAKGGKTVEIYFKDFLLPYVREHI--AEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDNITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHK---------ASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSVLAFLRMKSSDQAMD 905 L EG+A KVI+ ++ + G+L PK+ KV+P + +W + + WS A ++F + AK + + LL R++I +E L+ +Y+ ++ +L++ F L P + REA I G+++ ++ ++ A++ L+ + +S + ++ LDKKY LPY T++ V YF + + +P++W + F Y + ++ L R H + P + L +S + +D Sbjct: 198 LKSGEGVALPEKVIKAYTTVGSILKTWTHGKL-PKLFKVIPSLRNWQDVIYVTNPEEWSPHVVYEATKLFVSNLTAKESQK---FINLILLERFRDNIETSEDHSLNYHIYRAVKKSLYKPSAFFKGFLFPLVETGCNVREATIAGSVLAKVSVPALHSSAALSYLLR-LPFSPPTTVFIKILLDKKYALPYQTVDDCVYYFMRFRILDDGSNGEDATRVLPVIWHKAFLTFAQRYKNDITQDQRDFLLETVRQRGHKDIGPEIRRELLAGASREFVD 470
BLAST of SMED30018004 vs. Ensembl Nematostella
Match: BYSL (Bystin [Source:UniProtKB/Swiss-Prot;Acc:A7S7F2]) HSP 1 Score: 134.035 bits (336), Expect = 8.598e-34 Identity = 83/246 (33.74%), Postives = 133/246 (54.07%), Query Frame = -2 Query: 177 EGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWN--FFMEQLDFPNWSSTAV----QVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDD-NITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSV 893 E L + K + +++ Y+ G+L PK K +P + +W F+ + D WS+ A+ ++F + AK + +F LLP +++ IAE+KRL+ LY L+ ALF+ F +LLP C+ N + REA I+ +++ +TI + + + A+ + M YS I LR DKKY LPY I+ V +F + + +P++W Q L F+ Y ++ E L LCRVH HDK+TP V Sbjct: 171 ERLVKVFKGVGEILKKYRSGKL-PKAFKFIPSLTNWEEVLFITEPD--EWSAAALFQATKIFVSNLNAKMAQR---FFNLVLLPRIQDDIAEYKRLNYHLYMALKKALFKPAAFFKGILLPMCESGNCSLREAIIISSVLAKTTIPV-LHSSAVILKIAEMNYSGANSIFLRTLFDKKYALPYRVIDAAVYHFLRFLTDKRTLPVLWHQCLLTFVQRYKEDISSEQKEALMELCRVHVHDKITPEV 409
BLAST of SMED30018004 vs. Ensembl Medaka
Match: bysl (bystin like [Source:NCBI gene;Acc:101167780]) HSP 1 Score: 118.627 bits (296), Expect = 4.190e-28 Identity = 86/299 (28.76%), Postives = 153/299 (51.17%), Query Frame = -2 Query: 177 INEEDKIALEKFLN--PEI---VTDMI-EGMAEARKEVSELMGFDDIEEIDLADVEGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAV----QVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDNI-TGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSV 1040 ++ ED+ A+E F+N P + + D+I E + E + EV +M + D + E + + K++ Y+ G+L PK K++P + +W + + +WS+ A+ ++FS ++ + + ++ LLP VR+ IAE+KRL+ LY L+ ALF+ + +L+P C+ T REA I+G+I+ +I + ++ AM L MEY+ I LR LDKKY LP+ ++ V +F + +P++W Q+L Y L E L L ++ H ++ + Sbjct: 122 VDPEDEKAIEMFMNKNPPMRRTLADIIMEKITEKQTEVGTVMSEVSGRPMPQLDPR-ITEVYRGVGKVLSKYRSGKL-PKAFKIIPALANWEQVLYLTEPESWSAAAMYQATRIFSSNLKER---MAQRFYNLVLLPRVRDDIAEYKRLNFHLYSALKKALFKPGAWFKGILIPLCESGTCTLREAIIIGSILTKCSIPVLHSSAAMLKLAE-MEYNGANSIFLRLLLDKKYALPFRVLDALVAHFLSFRSEKRVLPVLWHQSLLTLAQRYKADLASEQKTALLELLKLQTHPPISAEI 414
BLAST of SMED30018004 vs. Planmine SMEST
Match: SMESG000079213.1 (SMESG000079213.1) HSP 1 Score: 693.345 bits (1788), Expect = 0.000e+0 Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = -2 Query: 132 MKRKTSENYDNTVDGKELKKIKRLVFQLNEDNEEESENVPTKDVVRDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEINEEDKIALEKFLNPEIVTDMIEGMAEARKEVSELMGFDDIEEIDLADVEGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAVQVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDNITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSVLAFLRMKSSDQAMDI 1271 MKRKTSENYDNTVDGKELKKIKRLVFQLNEDNEEESENVPTKDVVRDTISKSIKSDSESDISDDEDVVEYEQDDCEEINEEDKIALEKFLNPEIVTDMIEGMAEARKEVSELMGFDDIEEIDLADVEGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAVQVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDNITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSVLAFLRMKSSDQAMDI Sbjct: 1 MKRKTSENYDNTVDGKELKKIKRLVFQLNEDNEEESENVPTKDVVRDTISKSIKSDSESDISDDEDVVEYEQDDCEEINEEDKIALEKFLNPEIVTDMIEGMAEARKEVSELMGFDDIEEIDLADVEGLAEHLKVIRKLMVHYKKGRLFPKIVKVLPQINDWNFFMEQLDFPNWSSTAVQVFSDQVRAKGGKTVEIYFKDFLLPYVREHIAEHKRLDNTLYKTLQGALFRRREFMTHLLLPWCDDNITGREADILGNIIKSSTIKLDVAAPAMTCLMNNMEYSRDRLIVLRAFLDKKYNLPYATINCFVQYFHKASEIEGKMPLVWFQTLNLFLSLYYRSLNEEGIRNLEHLCRVHRHDKVTPSVLAFLRMKSSDQAMDI 380
BLAST of SMED30018004 vs. Planmine SMEST
Match: SMESG000039905.1 (SMESG000039905.1) HSP 1 Score: 204.912 bits (520), Expect = 7.985e-56 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 Query: 1453 VCLREKXXXXXXXXISQPVTVRKVCIYXXXXXXXXXXXXXQNQQTRIRFLIEKNDDCTESISETRKCQSEKCNSPNNGFISLRNCKYXXXXXXXXXXXRCGPGVRERKRKKLSRNCKPEFPQFTDRESCYNACAYD 1860 VCLREKSTSTTTTTISQPVTVRKVCIYSNWSDWSSCDDNCQNQQTRIRFLIEKNDDCTESISETRKCQSEKCNSPNNGFISLRNCKYSSWSEWSACSSRCGPGVRERKRKKLSRNCKPEFPQFTDRESCYNACAYD Sbjct: 702 VCLREKSTSTTTTTISQPVTVRKVCIYSNWSDWSSCDDNCQNQQTRIRFLIEKNDDCTESISETRKCQSEKCNSPNNGFISLRNCKYSSWSEWSACSSRCGPGVRERKRKKLSRNCKPEFPQFTDRESCYNACAYD 837 The following BLAST results are available for this feature:
BLAST of SMED30018004 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 2
BLAST of SMED30018004 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of SMED30018004 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of SMED30018004 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 1
BLAST of SMED30018004 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of SMED30018004 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 1
BLAST of SMED30018004 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of SMED30018004 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30018004 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of SMED30018004 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of SMED30018004 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of SMED30018004 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of SMED30018004 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 1
BLAST of SMED30018004 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 2
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30018004 ID=SMED30018004|Name=SMED30018004|organism=Schmidtea mediterranea sexual|type=transcript|length=2058bpback to top protein sequence of SMED30018004-orf-1 >SMED30018004-orf-1 ID=SMED30018004-orf-1|Name=SMED30018004-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=381bp MKRKTSENYDNTVDGKELKKIKRLVFQLNEDNEEESENVPTKDVVRDTISback to top protein sequence of SMED30018004-orf-2 >SMED30018004-orf-2 ID=SMED30018004-orf-2|Name=SMED30018004-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=144bp MIISSFSVCLREKSTSTTTTTISQPVTVRKVCIYSNWSDWSSCDDNCQNQback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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