SMED30017988

Overview
NameSMED30017988
Smed IDSMED30017988
Length (bp)496
Neoblast Clusters

Zeng et. al., 2018



 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30017988

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 27

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30017988h1SMcG0009890 SmedASXL_017257SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
head regionSMED30017988h1SMcG0009890 SmedASXL_004369SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
head regionSMED30017988h1SMcG0009890 SmedASXL_017252SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
Smed sexual biotypeSMED30017988h1SMcG0009889 Contig19558newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30017988h1SMcG0009889 Contig19558uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30017988h1SMcG0009890 Contig53784newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30017988h1SMcG0009890 Contig53784uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30017988h1SMcG0009890 Contig19558newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30017988h1SMcG0009890 Contig19558uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
nervous systemSMED30017988h1SMcG0009890 dd_Smed_v4_13603_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30017988h1SMcG0009890 dd_Smed_v4_13603_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30017988h1SMcG0009890 dd_Smed_v4_13603_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30017988h1SMcG0009890 dd_Smed_v4_11640_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30017988h1SMcG0009890 dd_Smed_v4_11640_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30017988h1SMcG0009890 dd_Smed_v4_9830_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30017988h1SMcG0009890 dd_Smed_v4_9830_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30017988h1SMcG0009890 dd_Smed_v4_9830_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30017988h1SMcG0009890 dd_Smed_v4_9830_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30017988h1SMcG0009890 dd_Smed_v4_9830_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30017988h1SMcG0009890 dd_Smed_v4_9830_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30017988h1SMcG0009890 dd_Smed_v4_16650_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30017988h1SMcG0009890 dd_Smed_v4_16650_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30017988h1SMcG0009890 dd_Smed_v4_16650_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30017988h1SMcG0009890 dd_Smed_v6_9830_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
neoblastSMED30017988h1SMcG0009890 dd_Smed_v6_16650_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
reproductive organSMED30017988h1SMcG0009890 Contig53784newmark_estsPMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30017988h1SMcG0009890 Contig53784uc_Smed_v2PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
Note: Hover over icons to view figure legend
Alignments
SMED30017988 aligns in the following genomic locations:
Alignment LocationAlignment Score
v31.000055:312589..313083 -2268
v31.000055:313599..315271 -1890
v31.000055:313231..313943 -1141
Homology
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BLAST of SMED30017988 vs. Planmine SMEST
Match: SMESG000064314.1 (SMESG000064314.1)

HSP 1 Score: 284.648 bits (727), Expect = 3.187e-89
Identity = 147/165 (89.09%), Postives = 155/165 (93.94%), Query Frame = 1 
Query:    1 GENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            GENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPE VSKVNEKDNSYDPNE  LA++ I EIDQG+NNI D VN++E+SKVDE+ HSAD  E+EPSE
Sbjct: 3254 GENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEEVSKVNEKDNSYDPNESGLAEYYIVEIDQGKNNITDPVNLNEISKVDEEDHSADLNENEPSE 3418

HSP 2 Score: 183.341 bits (464), Expect = 7.904e-54
Identity = 106/140 (75.71%), Postives = 112/140 (80.00%), Query Frame = 1 
Query:  100 ADQIERE--PAESNINEAGEEEITQEK------FNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
             D+I+R   P ES + E    EI Q K       NL ++SKV EK  S D NE+EPSE  INEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE
Sbjct: 2942 IDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 3081

HSP 3 Score: 138.272 bits (347), Expect = 4.462e-38
Identity = 99/198 (50.00%), Postives = 117/198 (59.09%), Query Frame = 1 
Query:    1 GENNVADPVYVDEGSNFYGKDDSGDLNE-------------------------------ETDHSADQIEREPAESNINEA--GEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
             +NN+ DPV ++E S    K  S DLNE                               E D+S D  E E A+ NI E   GE  I  +  N++++SKV EK  S DS ESEPSE  INEVDEGEPKQQEQ NPE V KVN+KDNS DPN+ EL + +I EIDQGENNIAD VNVDEVSKV+E  H+ +  ESEP E
Sbjct: 2967 SKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIA-DSVNVDEVSKVDEKYHSADSKESEPSEDNINEVDEGEPKQQEQFNPEEVLKVNKKDNSDDPNQSELVESHIIEIDQGENNIADHVNVDEVSKVEETDHTGNLNESEPYE 3163

HSP 4 Score: 122.479 bits (306), Expect = 1.398e-32
Identity = 87/195 (44.62%), Postives = 110/195 (56.41%), Query Frame = 1 
Query:    4 ENNVADPVYVDEGSNFYGKDDSGDLNE-------------------------------ETDHSADQIEREPAESNINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            E N++DPV VDE S     D + +LNE                               E D+S D    EP +SNINE G + +T EKFNLE++SK  E DDS D NE E  +  I  +DEGE    E+ N   +SK++E D S  PNE +LA+H I EIDQ +NNI D VN++E+SKVDEK HSAD  E+EPSE
Sbjct: 2806 EKNISDPVNVDEVSKVEETDRTANLNESEPYESNIKEVDVGEPKQKEQVNLEEVSKVNENDYSRDPNGSEPDDSNINELGGK-MTHEKFNLEEVSKARENDDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSE 2999

HSP 5 Score: 121.709 bits (304), Expect = 2.357e-32
Identity = 91/192 (47.40%), Postives = 112/192 (58.33%), Query Frame = 1 
Query:    1 GENNVADPVYVDEGSNFYGKDDSGDLNE-------------------------------ETDHSADQIEREPAESNINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQ-VNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKE 480
            G+NN+ DPV ++E S    +D S DLNE                               E D+S D  E EPAESNINE G E +T EKFNL + SK++EKDDS D N+SE +E  IN VDE EPKQQ+Q  N E  SKV+EKDNS DPNE EL + +I  I +GE NI++  NV E++KV  K HS D  E
Sbjct: 3386 GKNNITDPVNLNEISKVDEEDHSADLNENEPSESNINEVDEGEPKQQEQVNPEGVSKVNEKDNSNDPSEIEPAESNINEFGGE-MTNEKFNLVEASKIFEKDDSFDPNKSELAELNINGVDEEEPKQQQQNFNFEEASKVHEKDNSDDPNENELVEPHIKNIVEGEKNISEESNVKELTKVFGKQHSFDQIE 3576

HSP 6 Score: 110.923 bits (276), Expect = 1.475e-28
Identity = 88/207 (42.51%), Postives = 112/207 (54.11%), Query Frame = 1 
Query:    1 GENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEAGE-EEITQEKFN-----------------------------------------LEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            GENN+AD V VDE S            +E  HSAD  E EP+E NINE  E E   QE+FN                                         ++++SKV E D +G+ NESEP ES I EVDEGEPKQQEQVNPE VSKVNEK +S D NE E+ + NI  + +GE +I++  NV+E+SK+DE   S  + ES+ +E
Sbjct: 3049 GENNIADSVNVDEVSKV----------DEKYHSADSKESEPSEDNINEVDEGEPKQQEQFNPEEVLKVNKKDNSDDPNQSELVESHIIEIDQGENNIADHVNVDEVSKVEETDHTGNLNESEPYESNIKEVDEGEPKQQEQVNPEEVSKVNEKGDSGDTNESEIVEPNIKNVYEGETDISEEPNVNELSKIDEIDRSVYTNESKLAE 3245

HSP 7 Score: 109.383 bits (272), Expect = 4.528e-28
Identity = 81/165 (49.09%), Postives = 104/165 (63.03%), Query Frame = 1 
Query:    1 GENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            GE N++D V VD+ S    KDD      E+DHS D  + EP +S INE  E EIT +K NL+++ KV E +DS D NE E  ES I  V+EG+    E+ N    S ++E D S DPN+ EL++H I EIDQ E NI+D VNVDEVSKV+E   +A+  ESEP E
Sbjct: 2684 GEKNISDKVNVDQVS----KDD------ESDHSVDPNKSEPGKSYINEI-EGEITHKKINLDEVPKVDENNDSVDPNEIEIVESNIENVEEGKTNLSEESNINESSTIDEPDLSVDPNKSELSEHYIIEIDQVEKNISDPVNVDEVSKVEETDRTANLNESEPYE 2837

HSP 8 Score: 109.383 bits (272), Expect = 5.286e-28
Identity = 75/145 (51.72%), Postives = 100/145 (68.97%), Query Frame = 1 
Query:   64 DSGDLNEETDHSADQIEREPAESNINEAGEEEITQEK-FNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            D  ++ +ETDHSA+  + EP+ES INE  E +  Q+K  +L+ +SKV +KD S + NESE +ES I+EVDE E KQ EQVN E VS V+  D+S +PNE ELA+ NI E+D  + NI++ VN+DEVSKVDE     D  ESE +E
Sbjct: 2123 DQVNVVDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAE 2267

HSP 9 Score: 108.997 bits (271), Expect = 5.936e-28
Identity = 86/176 (48.86%), Postives = 102/176 (57.95%), Query Frame = 1 
Query:    1 GENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEAGE-EEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKV----------DEKYHSADSKESEPSE 495
            GENN+AD V VDE S            EETDH+ +  E EP ESNI E  E E   QE+ N E++SKV EK DSGD+NESE  E  I  V EGE    E+ N   +SK++E D S   NE +LA+H I EIDQGENN+AD V VDE S            +E  HSAD  E EP+E
Sbjct: 3131 GENNIADHVNVDEVSKV----------EETDHTGNLNESEPYESNIKEVDEGEPKQQEQVNPEEVSKVNEKGDSGDTNESEIVEPNIKNVYEGETDISEEPNVNELSKIDEIDRSVYTNESKLAEHYIIEIDQGENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAE 3296

HSP 10 Score: 107.457 bits (267), Expect = 2.275e-27
Identity = 75/137 (54.74%), Postives = 93/137 (67.88%), Query Frame = 1 
Query:   85 ETDHSADQIEREPAESNINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            ET++S DQIERE AESNI+E  EEEITQEKFNL+++SKV E D S D NESEPS S INE+ +GE    ++VN + VSK +E D+S DPN+ E  +  I EI +GE      +N+DEV KVDE   S D  E E  E
Sbjct: 2621 ETEYSVDQIERESAESNIDEVDEEEITQEKFNLKEVSKVDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSEPGKSYINEI-EGEIT-HKKINLDEVPKVDENNDSVDPNEIEIVE 2755

HSP 11 Score: 105.531 bits (262), Expect = 1.110e-26
Identity = 76/162 (46.91%), Postives = 100/162 (61.73%), Query Frame = 1 
Query:    1 GENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESE 486
            GE N+++   ++E SN +  D S DLNE           EP ESNIN+  EEE TQE+   E++SKV EKD S D NES+  E  I +VDE E KQ +Q+N + VSK++E D+S D NE +  + NI E+D GE    + VN +EVS VD+ YHS D  ESE
Sbjct: 1837 GERNISEQDNLEEVSNVFETDPSVDLNE----------NEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLD-VSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESE 1987

HSP 12 Score: 92.4337 bits (228), Expect = 3.768e-22
Identity = 69/138 (50.00%), Postives = 87/138 (63.04%), Query Frame = 1 
Query:   85 ETDHSADQIEREPAESNINEA-GEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            E D+S DQ E    E  + E    E I  ++ N E+ SK+ E D S D NESE +ES I+EVDEGE KQ EQVN E VS V+  D+S +PNE ELA+ NI  +D  + NI++ VN+DEVSKVDE     D  ESE +E
Sbjct: 1404 ERDYSVDQNEITLTEPIMKEVYNVENIQIQRVNSEENSKLDETDHSVDLNESELAESNISEVDEGETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIGVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAE 1541

HSP 13 Score: 92.0485 bits (227), Expect = 5.874e-22
Identity = 67/137 (48.91%), Postives = 90/137 (65.69%), Query Frame = 1 
Query:   85 ETDHSADQIEREPAESNINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            ETDHS DQ + E A+  I E  E     EK  L+ ++ V E D S +SN+SEPSES INEVDE + KQQ++V+ +GVSKV++KD S + NE ELA+ NI+E+D+ E    + VN +EVS VD   HS +  E E +E
Sbjct: 2094 ETDHSDDQNDGELAKQIIIEIDE----VEKNILDQVNVVDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAE 2226

HSP 14 Score: 87.8113 bits (216), Expect = 1.475e-20
Identity = 63/136 (46.32%), Postives = 84/136 (61.76%), Query Frame = 1 
Query:   85 ETDHSADQIEREPAESNINEA--GEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESE 486
            +T HS DQ E E A  NI +   GE+ I      L+ ++ +Y+ D S D N+ + +E  INEVD GEPKQQEQVN + VSKV+ KD S D NE EL + N+ EID+ E NI++  NV E+  V+E  HS D  + E
Sbjct: 1976 KTYHSVDQNESELANQNIIKIDKGEKNI------LDQVNVLYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNSDEVSKVDVKDKSVDTNESELCEPNVIEIDEVEKNISEKSNVKELLNVNETDHSDDQNDGE 2105

HSP 15 Score: 87.8113 bits (216), Expect = 1.640e-20
Identity = 66/135 (48.89%), Postives = 85/135 (62.96%), Query Frame = 1 
Query:   85 ETDHSADQIEREPAESNINEAGEEEITQ-EKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESE 486
            ETDHS    + EPAESNIN+  EEE  Q E+ N +++  V  KD S + +ESE  E    E+ E +    E+ N + + KV E ++S D NE EL + NI EID+ E NI+D VNVDE+SKVDE  HSAD  ESE
Sbjct: 2335 ETDHSIFPNQSEPAESNINKVDEEETKQQEQVNSDEVINVDVKDKSVNPDESELGEPNCIEIVEVDKNISEESNVKELLKVTETNHSVDQNEGELDEQNIIEIDKSEKNISDQVNVDELSKVDEIDHSADPNESE 2469

HSP 16 Score: 87.0409 bits (214), Expect = 3.349e-20
Identity = 63/138 (45.65%), Postives = 88/138 (63.77%), Query Frame = 1 
Query:   85 ETDHSADQIEREPAESNINEAGEEEITQEKFNL-EDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            + DHS +  E+   E    E  + E TQ    + E+ SK+ EK  S D NESEP+ES INEVD+ E KQQ++++ E VS V++ D+S D NE +LA+ NI E+D GE NI++  N++EVS V E   S D  E+EP+E
Sbjct: 1732 KIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTE 1869

HSP 17 Score: 86.2705 bits (212), Expect = 5.219e-20
Identity = 60/130 (46.15%), Postives = 82/130 (63.08%), Query Frame = 1 
Query:   85 ETDHSADQIEREPAESNINEAGEEEI-TQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSAD 471
            ET+HS DQ E E  E NI E  + E    ++ N+++LSKV E D S D NESE + S INEV++ E KQQE VN + +S+V EKDNSY+PN+ E  + NI  +D+ E NI +   +  +S +D   HS D
Sbjct: 2417 ETNHSVDQNEGELDEQNIIEIDKSEKNISDQVNVDELSKVDEIDHSADPNESESANSNINEVNKKETKQQELVNSKELSEVYEKDNSYNPNKKEFVEPNIKNVDEVEKNIIEESYLKALSMIDGTKHSVD 2546

HSP 18 Score: 85.8853 bits (211), Expect = 7.038e-20
Identity = 72/176 (40.91%), Postives = 92/176 (52.27%), Query Frame = 1 
Query:   94 HSADQIEREPAESNINEAGEEEITQEK-FNLEDLSKVYEKDDSGDSNES-----------------------------------------EPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            +SAD  E EPAESNINE  + E  Q+K  +LE++S V + D S DSNES                                         EP+ES IN+VDE E   QEQ+  E VSKV EKD S DPNE +  +HNI ++D+ E      +N+D VSK+DE  HS D+ ES+P E
Sbjct: 1776 YSADPNESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEE-TTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLD-VSKLDETDHSVDTNESKPVE 1949

HSP 19 Score: 84.3445 bits (207), Expect = 2.742e-19
Identity = 74/167 (44.31%), Postives = 95/167 (56.89%), Query Frame = 1 
Query:    1 GENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEA--GEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            GE N+ D V V      Y          +TDHS D  + + AE NINE   GE +  QE+ N +++SKV  KD S D+NESE  E  + E+DE E    E+ N + +  VNE D+S D N+ ELA+  I EID+ E NI D VNV     VDE  HSA+S +SEPSE
Sbjct: 1999 GEKNILDQVNV-----LY----------KTDHSVDPNKIKLAEFNINEVDNGEPK-QQEQVNSDEVSKVDVKDKSVDTNESELCEPNVIEIDEVEKNISEKSNVKELLNVNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNV-----VDETDHSANSNKSEPSE 2144

HSP 20 Score: 82.4185 bits (202), Expect = 1.345e-18
Identity = 68/137 (49.64%), Postives = 82/137 (59.85%), Query Frame = 1 
Query:   88 TDHSADQIEREPAESNINEAG-EEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            TDHS +  E E AE NI E   ++    EK NL+++SKV E D   D NESE +ES IN+VDEGE KQQEQVN E VS V E +NS   NE  L +    E+D  EN      N +E SKVDE  HS    +SEP+E
Sbjct: 2213 TDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVFELENSVILNENTLTEPIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAE 2349

HSP 21 Score: 80.4925 bits (197), Expect = 6.289e-18
Identity = 71/167 (42.51%), Postives = 93/167 (55.69%), Query Frame = 1 
Query:    1 GENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAES--NINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            GE    + V  +E SN Y  ++S  LNE T   + + E +  E+  N++   EEE           SKV E D S   N+SEP+ES IN+VDE E KQQ+QVN E V +V EK NS DPN  E    N+  +D+ E NI +  NV  +S VDEK HS D  +SE +E
Sbjct: 1550 GETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVENIQNVHANSEEE-----------SKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAE 1705

HSP 22 Score: 80.1073 bits (196), Expect = 6.793e-18
Identity = 68/138 (49.28%), Postives = 83/138 (60.14%), Query Frame = 1 
Query:   88 TDHSADQIEREPAESNI--NEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            TDHS +  E E AE NI   +  +  I+ EK NL+++SKV E D   D NESE +ES IN+VDEGE KQQEQVN E VS V E +NS   NE  L +    E+D  EN      N +E SKVDE  HS    +SEP+E
Sbjct: 1487 TDHSGEPNEHELAEQNIIGVDVDKRNIS-EKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAE 1623

HSP 23 Score: 78.1814 bits (191), Expect = 3.667e-17
Identity = 60/121 (49.59%), Postives = 75/121 (61.98%), Query Frame = 1 
Query:  154 EEITQEKFNLEDLSKVYEKDD---------SGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEP 489
            E IT+E  N+E++   Y K +         S D  E E +ES I+EVDE E   QE+ N + VSKV+E D+S DPNE E +  NI EI QGE NI+D VNVD+VSK DE  HS D  +SEP
Sbjct: 2595 EPITKEVDNIENIQTDYVKSEELKADETEYSVDQIERESAESNIDEVDEEEI-TQEKFNLKEVSKVDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSEP 2714

HSP 24 Score: 77.7962 bits (190), Expect = 4.620e-17
Identity = 61/139 (43.88%), Postives = 84/139 (60.43%), Query Frame = 1 
Query:   85 ETDHSADQIEREPAESNINEAGEEE--ITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            E +HS DQI+ E AE NI    EEE  IT +  NL++ SKV + D S + NE   +E    E+D+ E  Q + V  E  SK++EK  S DPNE E A+ NI E+D+ E      ++++EVS VD+  HSADS ES+ +E
Sbjct: 1691 EKEHSTDQIKSELAEPNIRNVDEEERNITADA-NLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAE 1828

HSP 25 Score: 73.9442 bits (180), Expect = 1.076e-15
Identity = 55/126 (43.65%), Postives = 77/126 (61.11%), Query Frame = 1 
Query:  118 EPAESNINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            E A+ NI +  EE   QE+ NLE+++ V E+D S D NE   +E  + EV   E  Q ++VN E  SK++E D+S D NE ELA+ NI+E+D+GE    + VN +EVS VD   HS +  E E +E
Sbjct: 1375 ELADHNIIKVEEETKKQEQINLEEVTNVDERDYSVDQNEITLTEPIMKEVYNVENIQIQRVNSEENSKLDETDHSVDLNESELAESNISEVDEGETKQLEQVNSEEVSNVDITDHSGEPNEHELAE 1500

HSP 26 Score: 73.9442 bits (180), Expect = 1.140e-15
Identity = 58/122 (47.54%), Postives = 74/122 (60.66%), Query Frame = 1 
Query:   85 ETDHSADQIEREPAESNINEAGEEEITQ-EKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKV 447
            ETDHS D  E E AESNI+E  E E  Q E+ N E++S V   D SG+ NE E +E  I  VD  +    E+VN + VSKV+E D   DPNE E A+ NI ++D+GE    + VN +EVS V
Sbjct: 1445 ETDHSVDLNESELAESNISEVDEGETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIGVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNV 1566

HSP 27 Score: 71.2478 bits (173), Expect = 1.041e-14
Identity = 60/155 (38.71%), Postives = 88/155 (56.77%), Query Frame = 1 
Query:   31 VDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            V+E  N Y         ++ D+S D  E    E+ IN+  EE I Q++ NLE++ KV E ++  + N SE ++  I +V+E E K+QEQ+N E V+ V+E+D S D NE  L +  + E+   EN     VN +E SK+DE  HS D  ESE +E
Sbjct: 1310 VNETFNLYVMTKM----DQKDNSVDPYESAHIEAKINKIDEETIKQKQVNLEEVPKVDETEEFINPNRSELADHNIIKVEE-ETKKQEQINLEEVTNVDERDYSVDQNEITLTEPIMKEVYNVENIQIQRVNSEENSKLDETDHSVDLNESELAE 1459

HSP 28 Score: 68.9366 bits (167), Expect = 6.467e-14
Identity = 57/138 (41.30%), Postives = 80/138 (57.97%), Query Frame = 1 
Query:   85 ETDHSADQIEREPAESNINEAGEEEITQE-KFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
            ETDHS    + EPAESNIN+  EEE  Q+ + N E + +V EK +S D N  E  +  +  VDE E    E+ N + +S V+EK++S D  + ELA+ NI  +D+ E NI    N+ E SKVD+  HS +  E   +E
Sbjct: 1609 ETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTE 1746

HSP 29 Score: 68.5514 bits (166), Expect = 6.984e-14
Identity = 66/166 (39.76%), Postives = 96/166 (57.83%), Query Frame = 1 
Query:    1 GENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEAGEEEITQEKF-NLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSE 495
             E N++D V VDE S            +E DHSAD  E E A SNINE  ++E  Q++  N ++LS+VYEKD+S + N+ E  E  I  VDE E    E+   + +S ++   +S D NE ELA+ NI  +++ E ++  + N+ EVSKVDE Y+S D  E+  +E
Sbjct: 2440 SEKNISDQVNVDELSKV----------DEIDHSADPNESESANSNINEVNKKETKQQELVNSKELSEVYEKDNSYNPNKKEFVEPNIKNVDEVEKNIIEESYLKALSMIDGTKHSVDENEEELAELNIKNVNEKERSLIYNANLIEVSKVDEIYYSEDPNENTLTE 2595

HSP 30 Score: 63.1586 bits (152), Expect = 6.478e-12
Identity = 47/121 (38.84%), Postives = 70/121 (57.85%), Query Frame = 1 
Query:   85 ETDHSADQIEREPAESNINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKV 447
            +T+HS +Q++ +  E NI +           NL DLS+V E D S +SNE   +   + EVD+G+  Q E  N E +SKV+E  +S +PNE EL + NI E+D+GE N    VN +E + +
Sbjct: 3674 KTEHSVNQMKCKIEERNITDDA---------NLRDLSQVDEIDHSVNSNERTLTGDNVIEVDKGQKNQHEPANLEEMSKVDEIHHSANPNESELDESNIYEVDEGETNQQKQVNPNESTPI 3785

HSP 31 Score: 62.7734 bits (151), Expect = 9.060e-12
Identity = 60/157 (38.22%), Postives = 82/157 (52.23%), Query Frame = 1 
Query:    1 GENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSAD 471
            GE N+++   V E +  +GK           HS DQIE    E NI +           N +D+S V E D + DSNESEP+ES  NEVDE E   +E+      SKV+EKDNS DP + EL +  I   + GE NI+    + ++ KVD+  HS +
Sbjct: 3549 GEKNISEESNVKELTKVFGKQ----------HSFDQIEGNSEERNITD---------DVNYKDVSHVDETDHADDSNESEPAESNFNEVDEEEGNSEEE------SKVDEKDNSDDPYKNELVEPLIKNFNVGEKNISGESCLKDLLKVDKTEHSVN 3680

HSP 32 Score: 60.8474 bits (146), Expect = 3.599e-11
Identity = 56/134 (41.79%), Postives = 70/134 (52.24%), Query Frame = 1 
Query:   85 ETDHSADQIEREPAESNINEAGEEEITQ-EKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKES 483
            E DHS +  ER     N+ E  + +  Q E  NLE++SKV E   S + NESE  ES I EVDEGE  QQ+QVNP          N   P EC     N  E+D GE    + VN++E S VD+  +  D KES
Sbjct: 3705 EIDHSVNSNERTLTGDNVIEVDKGQKNQHEPANLEEMSKVDEIHHSANPNESELDESNIYEVDEGETNQQKQVNP----------NESTPIEC-----NTNEVDGGEKYQTEHVNLEEESMVDKIDNFVDPKES 3823

HSP 33 Score: 48.9062 bits (115), Expect = 5.241e-7
Identity = 47/132 (35.61%), Postives = 64/132 (48.48%), Query Frame = 1 
Query:   85 ETDHSADQIEREPAESNINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKE 480
            E  HSA+  E E  ESNI E  E E  Q+K                + NES P E   NEVD GE  Q E VN E  S V++ DN  DP E    + ++ ++ +GE N A++  + + + VD  +   D KE
Sbjct: 3746 EIHHSANPNESELDESNIYEVDEGETNQQK--------------QVNPNESTPIECNTNEVDGGEKYQTEHVNLEEESMVDKIDNFVDPKESPFTKPDVNKVSEGEKNKAET-QIVKSTDVDTIFVQNDVKE 3862
The following BLAST results are available for this feature:
BLAST of SMED30017988 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30017988 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30017988 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30017988 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30017988 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30017988 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30017988 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30017988 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30017988 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30017988 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30017988 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30017988 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30017988 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30017988 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000064314.13.187e-8989.09SMESG000064314.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30017988 ID=SMED30017988|Name=SMED30017988|organism=Schmidtea mediterranea sexual|type=transcript|length=496bp
GGTGAAAATAATGTAGCAGATCCAGTTTATGTGGATGAGGGGTCAAACTT
TTATGGAAAAGATGACTCTGGTGATCTAAATGAAGAAACAGATCATTCTG
CTGATCAAATTGAACGTGAACCTGCTGAGTCTAATATCAATGAAGCCGGC
GAGGAAGAAATAACGCAAGAGAAATTTAATTTGGAAGATTTATCAAAAGT
TTATGAAAAAGATGACTCTGGTGATTCAAATGAAAGTGAGCCTTCTGAGT
CTTATATCAATGAGGTTGATGAGGGCGAACCAAAACAACAAGAACAGGTT
AATCCTGAAGGGGTATCAAAGGTTAATGAAAAAGATAATTCCTATGATCC
TAATGAATGTGAACTTGCTCAGCATAATATCACCGAAATTGATCAAGGTG
AAAATAATATAGCAGATTCAGTTAATGTGGATGAGGTTTCAAAGGTTGAT
GAAAAATATCATTCTGCTGATTCAAAGGAGAGTGAACCTTCTGAGG
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protein sequence of SMED30017988-orf-1

>SMED30017988-orf-1 ID=SMED30017988-orf-1|Name=SMED30017988-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=165bp
GENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEAG
EEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQV
NPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVD
EKYHSADSKESEPSE
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
PLANA:0002089reproductive organ
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..114