Ubiquinone biosynthesis protein

Overview
NameUbiquinone biosynthesis protein
Smed IDSMED30017958
Length (bp)2707
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Ubiquinone biosynthesis protein (SMED30017958) t-SNE clustered cells

Violin plots show distribution of expression levels for Ubiquinone biosynthesis protein (SMED30017958) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Ubiquinone biosynthesis protein (SMED30017958) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Ubiquinone biosynthesis protein (SMED30017958) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30017958

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30017958h1SMcG0017272 SmedASXL_012570SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30017958h1SMcG0017272 SmedASXL_012570SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X1 cellSMED30017958h1SMcG0017272 SmedASXL_012570SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30017958h1SMcG0017272 SmedASXL_012570SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
nervous systemSMED30017958h1SMcG0017272 dd_Smed_v4_5026_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30017958h1SMcG0017272 dd_Smed_v4_5026_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Human
Match: COQ9 (coenzyme Q9 [Source:HGNC Symbol;Acc:HGNC:25302])

HSP 1 Score: 96.6709 bits (239), Expect = 2.776e-23
Identity = 39/115 (33.91%), Postives = 75/115 (65.22%), Query Frame = 3 
Query: 1023 RNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMIV 1367
            R T   L + ++ RL ++ P +  WP A++ +  P N+  +  +  +++D++W  AGD+S + +WY++RA++ A+Y+++E+ M+QD S    +TW+FL+ R+NDA ++GH    V
Sbjct:  176 RKTDQFLRDAVETRLRMLIPYIEHWPRALSILMLPHNIPSSLSLLTSMVDDMWHYAGDQSTDFNWYTRRAMLAAIYNTTELVMMQDSSPDFEDTWRFLENRVNDAMNMGHTAKQV 290

HSP 2 Score: 33.4982 bits (75), Expect = 2.776e-23
Identity = 16/66 (24.24%), Postives = 29/66 (43.94%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNLMSEYLDK 957
             ++  IL  A+EFV   GW+ + I    +SL        +  +   ELI +F       ++  L++
Sbjct:   98 QLQHRILTAALEFVPAHGWTAEAIAEGAQSLGLSSAAASMFGKDGSELILHFVTQCNTRLTRVLEE 163
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Human
Match: COQ9 (coenzyme Q9 [Source:HGNC Symbol;Acc:HGNC:25302])

HSP 1 Score: 96.6709 bits (239), Expect = 2.825e-23
Identity = 39/115 (33.91%), Postives = 75/115 (65.22%), Query Frame = 3 
Query: 1023 RNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMIV 1367
            R T   L + ++ RL ++ P +  WP A++ +  P N+  +  +  +++D++W  AGD+S + +WY++RA++ A+Y+++E+ M+QD S    +TW+FL+ R+NDA ++GH    V
Sbjct:  180 RKTDQFLRDAVETRLRMLIPYIEHWPRALSILMLPHNIPSSLSLLTSMVDDMWHYAGDQSTDFNWYTRRAMLAAIYNTTELVMMQDSSPDFEDTWRFLENRVNDAMNMGHTAKQV 294

HSP 2 Score: 33.4982 bits (75), Expect = 2.825e-23
Identity = 16/66 (24.24%), Postives = 29/66 (43.94%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNLMSEYLDK 957
             ++  IL  A+EFV   GW+ + I    +SL        +  +   ELI +F       ++  L++
Sbjct:  102 QLQHRILTAALEFVPAHGWTAEAIAEGAQSLGLSSAAASMFGKDGSELILHFVTQCNTRLTRVLEE 167
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Human
Match: COQ9 (coenzyme Q9 [Source:HGNC Symbol;Acc:HGNC:25302])

HSP 1 Score: 77.7962 bits (190), Expect = 5.550e-15
Identity = 35/119 (29.41%), Postives = 72/119 (60.50%), Query Frame = 3 
Query: 1011 LFFSRNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMIV 1367
            +F    + +IL+   +    L   +  +   A++ +  P N+  +  +  +++D++W  AGD+S + +WY++RA++ A+Y+++E+ M+QD S    +TW+FL+ R+NDA ++GH    V
Sbjct:  137 MFGKDGSELILHFVTQCNTRLTRVLEEEQKLALSILMLPHNIPSSLSLLTSMVDDMWHYAGDQSTDFNWYTRRAMLAAIYNTTELVMMQDSSPDFEDTWRFLENRVNDAMNMGHTAKQV 255
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Human
Match: COQ9 (coenzyme Q9 [Source:HGNC Symbol;Acc:HGNC:25302])

HSP 1 Score: 57.7658 bits (138), Expect = 1.048e-8
Identity = 22/53 (41.51%), Postives = 39/53 (73.58%), Query Frame = 3 
Query: 1209 MSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMIV 1367
             +WY++RA++ A+Y+++E+ M+QD S    +TW+FL+ R+NDA ++GH    V
Sbjct:  127 FNWYTRRAMLAAIYNTTELVMMQDSSPDFEDTWRFLENRVNDAMNMGHTAKQV 179
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Fly
Match: Coq9 (gene:FBgn0050493 transcript:FBtr0088925)

HSP 1 Score: 79.337 bits (194), Expect = 1.641e-15
Identity = 31/100 (31.00%), Postives = 59/100 (59.00%), Query Frame = 3 
Query: 1038 ILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDA 1337
             L + ++ RL ++ P    WP+A+A ++ P +          L+D++   +GD+S +  WY++R  +  +   +E++ LQDKS GH +TW+FL  R+++A
Sbjct:  188 FLVQAVRQRLEMVTPYKTHWPQAMALLAQPQHAPTALAQVLTLVDDICYYSGDRSVDFGWYTRRVGLATIMKMTELYFLQDKSPGHAQTWEFLKSRMDEA 287
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Zebrafish
Match: coq9 (coenzyme Q9 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-37])

HSP 1 Score: 87.8113 bits (216), Expect = 3.936e-22
Identity = 36/112 (32.14%), Postives = 68/112 (60.71%), Query Frame = 3 
Query: 1023 RNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVG 1358
            + T   L + ++ RL ++ P +  WP+A++ +  P N+  +      L+D++W  AGD+S +++WY++RA +  +Y+++E+ M+QD S    ETW FLD R+ D  +I +  
Sbjct:  189 KKTAEFLKDAVEMRLRMLTPYIDTWPQAMSILLLPHNIPDSLKHLTTLVDDIWYYAGDRSTDVNWYTRRAALTGIYNTTELVMVQDSSPDFEETWAFLDNRIKDVVNIANTA 300

HSP 2 Score: 38.1206 bits (87), Expect = 3.936e-22
Identity = 16/64 (25.00%), Postives = 31/64 (48.44%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNLMSEYL 951
             ++  IL  A+EFV + GW+ + I    ++L       G+ + G  +L+ +F       ++E L
Sbjct:  111 QLQARILTTALEFVPQHGWTVEAIAAGAETLGLSAASTGMFNNGAGDLVLHFVAQCNTQLAETL 174
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Zebrafish
Match: coq9 (coenzyme Q9 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-37])

HSP 1 Score: 87.8113 bits (216), Expect = 3.936e-22
Identity = 36/112 (32.14%), Postives = 68/112 (60.71%), Query Frame = 3 
Query: 1023 RNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVG 1358
            + T   L + ++ RL ++ P +  WP+A++ +  P N+  +      L+D++W  AGD+S +++WY++RA +  +Y+++E+ M+QD S    ETW FLD R+ D  +I +  
Sbjct:  189 KKTAEFLKDAVEMRLRMLTPYIDTWPQAMSILLLPHNIPDSLKHLTTLVDDIWYYAGDRSTDVNWYTRRAALTGIYNTTELVMVQDSSPDFEETWAFLDNRIKDVVNIANTA 300

HSP 2 Score: 38.1206 bits (87), Expect = 3.936e-22
Identity = 16/64 (25.00%), Postives = 31/64 (48.44%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNLMSEYL 951
             ++  IL  A+EFV + GW+ + I    ++L       G+ + G  +L+ +F       ++E L
Sbjct:  111 QLQARILTTALEFVPQHGWTVEAIAAGAETLGLSAASTGMFNNGAGDLVLHFVAQCNTQLAETL 174
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Zebrafish
Match: coq9 (coenzyme Q9 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-37])

HSP 1 Score: 87.4261 bits (215), Expect = 4.494e-22
Identity = 36/112 (32.14%), Postives = 68/112 (60.71%), Query Frame = 3 
Query: 1023 RNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVG 1358
            + T   L + ++ RL ++ P +  WP+A++ +  P N+  +      L+D++W  AGD+S +++WY++RA +  +Y+++E+ M+QD S    ETW FLD R+ D  +I +  
Sbjct:  189 KKTAEFLKDAVEMRLRMLTPYIDTWPQAMSILLLPHNIPDSLKHLTTLVDDIWYYAGDRSTDVNWYTRRAALTGIYNTTELVMVQDSSPDFEETWAFLDNRIKDVVNIANTA 300

HSP 2 Score: 38.1206 bits (87), Expect = 4.494e-22
Identity = 16/64 (25.00%), Postives = 31/64 (48.44%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNLMSEYL 951
             ++  IL  A+EFV + GW+ + I    ++L       G+ + G  +L+ +F       ++E L
Sbjct:  111 QLQARILTTALEFVPQHGWTVEAIAAGAETLGLSAASTGMFNNGAGDLVLHFVAQCNTQLAETL 174
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Xenopus
Match: coq9 (coenzyme Q9 [Source:NCBI gene;Acc:496601])

HSP 1 Score: 88.5817 bits (218), Expect = 1.079e-25
Identity = 36/109 (33.03%), Postives = 72/109 (66.06%), Query Frame = 3 
Query: 1023 RNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIG 1349
            + T   L + ++ RL +  P + +WP+A+  +  P N+  +  +   ++D++W  AGD+S ++SWY++RAV+  +Y+++E+ MLQD S    +TW+FL+ R+++A ++G
Sbjct:  175 KPTTQFLRDAVEARLRMHIPYIEQWPQALGMLLLPRNIPSSLKLLTAMVDDIWHYAGDQSTDVSWYTRRAVLTGIYNTTELVMLQDSSPDFEDTWKFLENRISEAMTMG 283

HSP 2 Score: 50.0618 bits (118), Expect = 1.079e-25
Identity = 21/66 (31.82%), Postives = 38/66 (57.58%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNLMSEYLDK 957
             +++ IL+ A++FV + GWS D I    KSLD      G+ ++G  EL+ +F     + ++E L++
Sbjct:   97 QLQQRILSAALQFVPDFGWSADAIAEGAKSLDMSAAAAGMFEDGGSELVLHFVTQCNSQLTELLEE 162
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Xenopus
Match: coq9 (coenzyme Q9 [Source:NCBI gene;Acc:496601])

HSP 1 Score: 88.5817 bits (218), Expect = 1.244e-25
Identity = 36/109 (33.03%), Postives = 72/109 (66.06%), Query Frame = 3 
Query: 1023 RNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIG 1349
            + T   L + ++ RL +  P + +WP+A+  +  P N+  +  +   ++D++W  AGD+S ++SWY++RAV+  +Y+++E+ MLQD S    +TW+FL+ R+++A ++G
Sbjct:  147 KPTTQFLRDAVEARLRMHIPYIEQWPQALGMLLLPRNIPSSLKLLTAMVDDIWHYAGDQSTDVSWYTRRAVLTGIYNTTELVMLQDSSPDFEDTWKFLENRISEAMTMG 255

HSP 2 Score: 49.6766 bits (117), Expect = 1.244e-25
Identity = 21/66 (31.82%), Postives = 38/66 (57.58%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNLMSEYLDK 957
             +++ IL+ A++FV + GWS D I    KSLD      G+ ++G  EL+ +F     + ++E L++
Sbjct:   69 QLQQRILSAALQFVPDFGWSADAIAEGAKSLDMSAAAAGMFEDGGSELVLHFVTQCNSQLTELLEE 134
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Xenopus
Match: coq9 (coenzyme Q9 [Source:NCBI gene;Acc:496601])

HSP 1 Score: 73.1738 bits (178), Expect = 3.799e-21
Identity = 36/122 (29.51%), Postives = 71/122 (58.20%), Query Frame = 3 
Query: 1023 RNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSK-------------NMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIG 1349
            + T   L + ++ RL +  P + +WP+A+  +  P N+  +  +   ++D++W  AGD+S               +SWY++RAV+  +Y+++E+ MLQD S    +TW+FL+ R+++A ++G
Sbjct:  175 KPTTQFLRDAVEARLRMHIPYIEQWPQALGMLLLPRNIPSSLKLLTAMVDDIWHYAGDQSTDSQSQSQPECAQLQVSWYTRRAVLTGIYNTTELVMLQDSSPDFEDTWKFLENRISEAMTMG 296

HSP 2 Score: 50.0618 bits (118), Expect = 3.799e-21
Identity = 21/66 (31.82%), Postives = 38/66 (57.58%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNLMSEYLDK 957
             +++ IL+ A++FV + GWS D I    KSLD      G+ ++G  EL+ +F     + ++E L++
Sbjct:   97 QLQQRILSAALQFVPDFGWSADAIAEGAKSLDMSAAAAGMFEDGGSELVLHFVTQCNSQLTELLEE 162
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Mouse
Match: Coq9 (coenzyme Q9 [Source:MGI Symbol;Acc:MGI:1915164])

HSP 1 Score: 95.9005 bits (237), Expect = 2.695e-23
Identity = 39/115 (33.91%), Postives = 74/115 (64.35%), Query Frame = 3 
Query: 1023 RNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMIV 1367
            R T   L + ++ RL ++ P +  WP A++ +  P N+  +  +  +++D++W  AGD+S + +WY++RAV+  +Y+++E+ M+QD S    +TW+FL+ R+NDA ++GH    V
Sbjct:  171 RKTDQFLRDAVETRLRMLIPYIEHWPRALSILLLPHNIPPSLNLLTSMVDDMWHYAGDQSTDFNWYTRRAVLAGIYNTTELVMMQDSSPDFEDTWRFLENRINDAMNMGHTAKQV 285

HSP 2 Score: 33.8834 bits (76), Expect = 2.695e-23
Identity = 20/72 (27.78%), Postives = 31/72 (43.06%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYF---YETRTNLMSEYLDKLLK 966
             ++  IL  A+EFV   GW+ + I    +SL        +      ELI +F      R N + E   KL++
Sbjct:   93 QLQHRILTAALEFVPAHGWTAEAIAEGAQSLGLSSAAASMFGSDGSELILHFVTQCNARLNQVLEEEQKLVQ 164
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Mouse
Match: Coq9 (coenzyme Q9 [Source:MGI Symbol;Acc:MGI:1915164])

HSP 1 Score: 58.9214 bits (141), Expect = 6.979e-9
Identity = 30/115 (26.09%), Postives = 52/115 (45.22%), Query Frame = 3 
Query: 1023 RNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMIV 1367
            R T   L + ++ RL ++ P +  WP                                     +WY++RAV+  +Y+++E+ M+QD S    +TW+FL+ R+NDA ++GH    V
Sbjct:  171 RKTDQFLRDAVETRLRMLIPYIEHWP-----------------------------------RFNWYTRRAVLAGIYNTTELVMMQDSSPDFEDTWRFLENRINDAMNMGHTAKQV 250
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Mouse
Match: Coq9 (coenzyme Q9 [Source:MGI Symbol;Acc:MGI:1915164])

HSP 1 Score: 54.6842 bits (130), Expect = 1.097e-8
Identity = 21/50 (42.00%), Postives = 36/50 (72.00%), Query Frame = 3 
Query: 1218 YSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMIV 1367
            Y++RAV+  +Y+++E+ M+QD S    +TW+FL+ R+NDA ++GH    V
Sbjct:    2 YTRRAVLAGIYNTTELVMMQDSSPDFEDTWRFLENRINDAMNMGHTAKQV 51
[Close]
BLAST of Ubiquinone biosynthesis protein vs. UniProt/SwissProt
Match: sp|Q5PPX7|COQ9B_XENLA (Ubiquinone biosynthesis protein COQ9-B, mitochondrial OS=Xenopus laevis OX=8355 GN=coq9-b PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.524e-26
Identity = 38/110 (34.55%), Postives = 72/110 (65.45%), Query Frame = 3 
Query: 1023 RNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGH 1352
            + T   L + +K RL +  P + +WP+A+  +  P N+  +  +   ++D++W  AGD+S ++SWY+ RAV+  +Y+S+E+ MLQD S    +TW+FL+ R+++A ++G+
Sbjct:  151 KPTAQFLRDAVKARLRMHIPYIEQWPQALGMLLLPRNIPSSLKLLSAMVDDMWHYAGDQSTDVSWYTSRAVLTGIYNSTELVMLQDSSPDFEDTWKFLENRISEAMTMGN 260

HSP 2 Score: 51.2174 bits (121), Expect = 5.524e-26
Identity = 25/67 (37.31%), Postives = 40/67 (59.70%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNL-MSEYLDK 957
             +++ IL  A++FV + GWS D I    KSLD      G+ ++G  EL+ +F  T+ NL ++E L+K
Sbjct:   73 QLQQRILTAALQFVPDFGWSADAIAEGAKSLDMSAAAGGMFEDGGSELVLHFV-TQCNLQLTELLEK 138
[Close]
BLAST of Ubiquinone biosynthesis protein vs. UniProt/SwissProt
Match: sp|Q3B8B2|COQ9A_XENLA (Ubiquinone biosynthesis protein COQ9-A, mitochondrial OS=Xenopus laevis OX=8355 GN=coq9-a PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.960e-25
Identity = 36/109 (33.03%), Postives = 71/109 (65.14%), Query Frame = 3 
Query: 1023 RNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIG 1349
            + T   L + ++ RL +  P +  WP+A+  +  P N+  +  +   ++D++W  AGD+S ++SWY++RAV+  +Y+++E+ MLQD S    +TW+FL+ R+++A ++G
Sbjct:  175 KPTAQFLRDAVEARLRMHIPYIEHWPQALGMLLLPRNIPSSLKLLTAMVDDIWHYAGDQSTDVSWYTRRAVLTGIYNTTELVMLQDSSPDFEDTWKFLENRISEAMTMG 283

HSP 2 Score: 51.9878 bits (123), Expect = 1.960e-25
Identity = 26/67 (38.81%), Postives = 41/67 (61.19%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNL-MSEYLDK 957
             +++ IL+ A++FV + GWS D I    KSLD      G+ ++G  ELI +F  T+ NL ++E L+K
Sbjct:   97 QLQQQILSAALQFVPDFGWSADAIAEGAKSLDMSAAAAGMFEDGGSELILHFV-TQCNLQLTELLEK 162
[Close]
BLAST of Ubiquinone biosynthesis protein vs. UniProt/SwissProt
Match: sp|Q5RJV0|COQ9_XENTR (Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Xenopus tropicalis OX=8364 GN=coq9 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.393e-25
Identity = 36/109 (33.03%), Postives = 72/109 (66.06%), Query Frame = 3 
Query: 1023 RNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIG 1349
            + T   L + ++ RL +  P + +WP+A+  +  P N+  +  +   ++D++W  AGD+S ++SWY++RAV+  +Y+++E+ MLQD S    +TW+FL+ R+++A ++G
Sbjct:  175 KPTTQFLRDAVEARLRMHIPYIEQWPQALGMLLLPRNIPSSLKLLTAMVDDIWHYAGDQSTDVSWYTRRAVLTGIYNTTELVMLQDSSPDFEDTWKFLENRISEAMTMG 283

HSP 2 Score: 50.0618 bits (118), Expect = 4.393e-25
Identity = 21/66 (31.82%), Postives = 38/66 (57.58%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNLMSEYLDK 957
             +++ IL+ A++FV + GWS D I    KSLD      G+ ++G  EL+ +F     + ++E L++
Sbjct:   97 QLQQRILSAALQFVPDFGWSADAIAEGAKSLDMSAAAAGMFEDGGSELVLHFVTQCNSQLTELLEE 162
[Close]
BLAST of Ubiquinone biosynthesis protein vs. UniProt/SwissProt
Match: sp|Q68FT1|COQ9_RAT (Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Rattus norvegicus OX=10116 GN=Coq9 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.125e-23
Identity = 40/115 (34.78%), Postives = 74/115 (64.35%), Query Frame = 3 
Query: 1023 RNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMIV 1367
            R T   L + ++ RL ++ P +  WP A++ +  P N+  +  +  +++D++W  AGD+S + +WY++RAV+  +Y+++E+ M+QD S    +TW+FLD R+NDA ++GH    V
Sbjct:  170 RKTDQFLRDAVETRLRMLIPYIEHWPRALSILLLPQNIPPSLSLLTSMVDDMWHYAGDQSTDFNWYTRRAVLAGIYNTTELVMMQDSSPDFEDTWRFLDNRINDAMNMGHTAKQV 284

HSP 2 Score: 34.6538 bits (78), Expect = 1.125e-23
Identity = 21/72 (29.17%), Postives = 32/72 (44.44%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYF---YETRTNLMSEYLDKLLK 966
             I+  IL  A+EFV + GW+ + I    +SL        +      ELI +F      R N + E   KL++
Sbjct:   92 QIQHRILTAALEFVPDHGWTAEAIAEGAQSLGLSSAAASMFGSDGSELILHFVTQCNARLNHVLEEEQKLVQ 163
[Close]
BLAST of Ubiquinone biosynthesis protein vs. UniProt/SwissProt
Match: sp|O75208|COQ9_HUMAN (Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Homo sapiens OX=9606 GN=COQ9 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.232e-22
Identity = 39/115 (33.91%), Postives = 75/115 (65.22%), Query Frame = 3 
Query: 1023 RNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMIV 1367
            R T   L + ++ RL ++ P +  WP A++ +  P N+  +  +  +++D++W  AGD+S + +WY++RA++ A+Y+++E+ M+QD S    +TW+FL+ R+NDA ++GH    V
Sbjct:  176 RKTDQFLRDAVETRLRMLIPYIEHWPRALSILMLPHNIPSSLSLLTSMVDDMWHYAGDQSTDFNWYTRRAMLAAIYNTTELVMMQDSSPDFEDTWRFLENRVNDAMNMGHTAKQV 290

HSP 2 Score: 33.4982 bits (75), Expect = 1.232e-22
Identity = 16/66 (24.24%), Postives = 29/66 (43.94%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNLMSEYLDK 957
             ++  IL  A+EFV   GW+ + I    +SL        +  +   ELI +F       ++  L++
Sbjct:   98 QLQHRILTAALEFVPAHGWTAEAIAEGAQSLGLSSAAASMFGKDGSELILHFVTQCNTRLTRVLEE 163
[Close]
BLAST of Ubiquinone biosynthesis protein vs. TrEMBL
Match: K1QVV9 (Neuron navigator 2 OS=Crassostrea gigas OX=29159 GN=CGI_10023552 PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.775e-29
Identity = 41/113 (36.28%), Postives = 73/113 (64.60%), Query Frame = 3 
Query: 1038 ILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMIVSLQ 1376
             +++ I+ RL +I P + KWP+A+A  + P N  ++      ++D++W  AGDKS + +WY+KR  + A+Y S+E++++QD+S+ + +TW FL+ RL D  S GH+     +Q
Sbjct: 1936 FIHDAIETRLRMIIPYIDKWPQAMAIQTLPQNAVQSWTNLSRVVDDIWFYAGDKSNDFNWYTKRGSLAAIYKSTEIYLIQDRSEDYTDTWNFLENRLEDVVSAGHLARNACIQ 2048

HSP 2 Score: 59.3066 bits (142), Expect = 1.775e-29
Identity = 26/75 (34.67%), Postives = 41/75 (54.67%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNLMSEYLDKLLKSTDPKD 984
              K+A+L  ++ FV + GW+K  IV   +SL  P  +HG+   G  EL++YFYE     +  +L + +K    KD
Sbjct: 1854 QTKQAVLKASLPFVHQYGWTKKAIVAGAESLGMPSMVHGMFPRGGAELVFYFYEESNKELESFLKQKVKELKEKD 1928
[Close]
BLAST of Ubiquinone biosynthesis protein vs. TrEMBL
Match: A0A1B6FSI4 (Ubiquinone biosynthesis protein OS=Cuerna arida OX=1464854 GN=g.17468 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.743e-29
Identity = 40/112 (35.71%), Postives = 74/112 (66.07%), Query Frame = 3 
Query: 1020 SRNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHV 1355
            ++  ++ + + ++ RL +I P L +WP+A+A M+ P N+         L+D++   AGD+S +++WYS+R  + A+Y  +E++MLQD S+GH+ TW+FL RR+++A  +  V
Sbjct:  141 TKEPQVFVRDAVETRLRMITPYLAQWPQALALMTLPPNVPTALANLLTLVDDICYYAGDRSVDLNWYSRRVALAAIYKMTELYMLQDSSEGHVATWEFLTRRVDEAAQLHSV 252

HSP 2 Score: 56.6102 bits (135), Expect = 2.743e-29
Identity = 25/72 (34.72%), Postives = 42/72 (58.33%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNLMSEYLDKLLKSTD 975
            +IK+ IL  ++ FV + GWSK+ I     +L YP  +HG+  +G  +L+ +FY T    ++  L +  +STD
Sbjct:   66 NIKQKILQASLPFVIQYGWSKNAISAGASTLGYPGVIHGMFPQGGADLVSHFYATCNQELATQLKQAAESTD 137
[Close]
BLAST of Ubiquinone biosynthesis protein vs. TrEMBL
Match: A0A1B6GGS4 (Ubiquinone biosynthesis protein (Fragment) OS=Cuerna arida OX=1464854 GN=g.17469 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.897e-29
Identity = 40/112 (35.71%), Postives = 74/112 (66.07%), Query Frame = 3 
Query: 1020 SRNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHV 1355
            ++  ++ + + ++ RL +I P L +WP+A+A M+ P N+         L+D++   AGD+S +++WYS+R  + A+Y  +E++MLQD S+GH+ TW+FL RR+++A  +  V
Sbjct:  102 TKEPQVFVRDAVETRLRMITPYLAQWPQALALMTLPPNVPTALANLLTLVDDICYYAGDRSVDLNWYSRRVALAAIYKMTELYMLQDSSEGHVATWEFLTRRVDEAAQLHSV 213

HSP 2 Score: 56.225 bits (134), Expect = 3.897e-29
Identity = 25/72 (34.72%), Postives = 42/72 (58.33%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNLMSEYLDKLLKSTD 975
            +IK+ IL  ++ FV + GWSK+ I     +L YP  +HG+  +G  +L+ +FY T    ++  L +  +STD
Sbjct:   27 NIKQKILQASLPFVIQYGWSKNAISAGASTLGYPGVIHGMFPQGGADLVSHFYATCNQELATQLKQAAESTD 98
[Close]
BLAST of Ubiquinone biosynthesis protein vs. TrEMBL
Match: A0A0P1AQ00 (Ubiquinone biosynthesis protein OS=Plasmopara halstedii OX=4781 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.169e-28
Identity = 48/102 (47.06%), Postives = 72/102 (70.59%), Query Frame = 3 
Query: 1050 GIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHV 1355
            G++ RL ++EPVL  WP+ +A  ++P N   T      L DE+W  AGDKS ++SWY+KRA++ A+Y+S+E+FML DKS    ETW+FLDRR+++  S+G +
Sbjct:  152 GVRTRLEMLEPVLATWPQGMAIGAFPQNAPGTAKRLAKLSDEIWYFAGDKSTDLSWYTKRAILSAIYASTELFMLNDKSPNRQETWEFLDRRVDETISLGEL 253

HSP 2 Score: 43.1282 bits (100), Expect = 1.169e-28
Identity = 20/63 (31.75%), Postives = 33/63 (52.38%), Query Frame = 1 
Query:  763 IKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNLMSEYL 951
            +++ IL K ++ V   GW+ + +      L YP   HG+   G +EL+ YF +T  N + E L
Sbjct:   71 LEQRILAKTMDNVPVHGWTVEALAAGAIDLGYPSVAHGMFSRGAIELVDYFMDTCLNKLRETL 133
[Close]
BLAST of Ubiquinone biosynthesis protein vs. TrEMBL
Match: A0A015ITK5 (Ubiquinone biosynthesis protein OS=Rhizophagus irregularis (strain DAOM 197198w) OX=1432141 GN=RirG_178690 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.609e-28
Identity = 46/98 (46.94%), Postives = 69/98 (70.41%), Query Frame = 3 
Query: 1062 RLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHV 1355
            RL+L +P + KWPEA+A M+ P N+S        L+D++W  AGDKS +M+WYSKRA++ A+Y+S+E++M QD S     T+QFL+RRL D+ + G +
Sbjct:  162 RLNLTKPYIRKWPEALAIMAQPNNVSMAVEHLAKLVDDMWYLAGDKSADMNWYSKRAILAAIYTSTELYMTQDTSPDFTGTYQFLNRRLQDSATFGSL 259

HSP 2 Score: 50.8322 bits (120), Expect = 2.609e-28
Identity = 25/63 (39.68%), Postives = 36/63 (57.14%), Query Frame = 1 
Query:  775 ILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYE-TRTNLMSEYLDKL 960
            IL  ++ FV++ GWS D + +  K+L YP   HG+  +G  ELI YF E  R  +  E  DK+
Sbjct:   84 ILKASLPFVNQYGWSIDALSQGAKTLGYPNISHGLFPKGGAELIDYFLEDCRRKMSHEIFDKM 146
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Cavefish
Match: coq9 (coenzyme Q9 [Source:NCBI gene;Acc:103031824])

HSP 1 Score: 86.2705 bits (212), Expect = 2.327e-22
Identity = 34/104 (32.69%), Postives = 66/104 (63.46%), Query Frame = 3 
Query: 1023 RNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLND 1334
            + T   L + ++ RL ++ P +  WP+A++ +  P N+ ++      L+D++W  AGD+S +++WY++RA +  +Y+++E+ M+QD S    +TW FLD R+ D
Sbjct:  194 KKTAEFLKDAVETRLRMLIPYIDTWPQAMSILLLPHNIPESLKHLSTLVDDIWYYAGDRSTDLNWYTRRATLTGIYNTTELVMVQDSSPDFEDTWTFLDNRIKD 297

HSP 2 Score: 40.4318 bits (93), Expect = 2.327e-22
Identity = 16/52 (30.77%), Postives = 27/52 (51.92%), Query Frame = 1 
Query:  760 HIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYF 915
             ++  IL  A+EFV + GW+ D I    ++L       G+ D G  +L+ +F
Sbjct:  116 QLQARILTAALEFVPQHGWTVDAIAAGAETLGLSAASAGMFDNGAGDLVLHF 167
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Sea Lamprey
Match: coq9 (coenzyme Q9 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-37])

HSP 1 Score: 85.8853 bits (211), Expect = 7.772e-23
Identity = 35/106 (33.02%), Postives = 68/106 (64.15%), Query Frame = 3 
Query: 1020 SRNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDA 1337
            ++ T   L + I+ RL ++ P + KW +A+  +  P NL ++  +   L+DE+  + GD+S + +WY++R ++ A+Y+++E+ M+QDKS    +TW FL+ R+ +A
Sbjct:  130 NKETDQFLRDAIEARLRMLIPYMDKWTQAMGILVMPQNLPESVTLLTALVDEICYQGGDRSTDFNWYTRRGMLAAIYNATELVMVQDKSHDFQDTWTFLENRIGNA 235

HSP 2 Score: 40.0466 bits (92), Expect = 7.772e-23
Identity = 20/63 (31.75%), Postives = 35/63 (55.56%), Query Frame = 1 
Query:  763 IKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNLMSEYL 951
            +K+ IL +A+EFV E GW+ + +  A  +    P + GI  +G  +L+ +F +     +SE L
Sbjct:   54 MKQRILMRALEFVPEFGWTNEALAEAATAEGLSPAVSGIFQKGAGDLVLHFVQDCNKRLSEQL 116
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Nematostella
Match: EDO32539 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUS2])

HSP 1 Score: 85.5001 bits (210), Expect = 5.036e-18
Identity = 34/100 (34.00%), Postives = 63/100 (63.00%), Query Frame = 3 
Query: 1035 IILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLND 1334
            +++ + ++ RL ++ P +  WP+A+  M  P N          ++DE+W  AGD S + +WY+KRA++ A+Y ++E++M++D+S+    TW FLD R+ D
Sbjct:  168 VVIRDALETRLRMVIPYISTWPQAMQLMMRPENAPDALKNVAYMVDEIWYHAGDTSTDYNWYTKRAMLAALYGATEVYMVRDQSEDFTNTWAFLDNRIAD 267
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Medaka
Match: coq9 (coenzyme Q9 [Source:NCBI gene;Acc:101167533])

HSP 1 Score: 91.2781 bits (225), Expect = 3.762e-23
Identity = 38/104 (36.54%), Postives = 66/104 (63.46%), Query Frame = 3 
Query: 1023 RNTRIILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLND 1334
            + T   L + ++ RL +  P +  WP+A++ +  P N+  +     NL+D++W  AGD+S +M+WY+KRAV+  +Y+++E+ M+QD S    +TW FLD R+ D
Sbjct:  215 KKTSEFLRDAVETRLRMYIPYIETWPQAMSILLLPHNIPDSLKHLSNLVDDIWYYAGDRSTDMNWYTKRAVLTGIYNTTELVMVQDSSPDFQDTWAFLDNRIQD 318

HSP 2 Score: 37.7354 bits (86), Expect = 3.762e-23
Identity = 24/77 (31.17%), Postives = 35/77 (45.45%), Query Frame = 1 
Query:  727 QSNKNDEK--SIPHIKEAILNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETRTNLMSEYL 951
            QS   DE+  S   ++  IL  A+EFV   GWS + I    +SL       G+   G  EL+ +F       ++E L
Sbjct:  124 QSEYQDEEYESEEQLQARILTAALEFVPLHGWSMEAIAAGAESLGLSSASTGMFINGSGELVLHFIADCNTKLTEIL 200
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Planmine SMEST
Match: SMESG000036896.1 (SMESG000036896.1)

HSP 1 Score: 229.565 bits (584), Expect = 2.434e-78
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 3 
Query: 1035 IILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMIV 1367
            IILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKS NMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMI 
Sbjct:   41 IILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSTNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMIA 151

HSP 2 Score: 83.9593 bits (206), Expect = 2.434e-78
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 1 
Query:  868 MHGIIDEGEMELIYYFYETRTNLMSEYLDKLLKSTDPKDM 987
            MHGIIDEGEMELIYYFYETRTNLMSEYLDKLLKSTDPKD+
Sbjct:    1 MHGIIDEGEMELIYYFYETRTNLMSEYLDKLLKSTDPKDI 40
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Planmine SMEST
Match: SMESG000036896.1 (SMESG000036896.1)

HSP 1 Score: 229.18 bits (583), Expect = 3.674e-70
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 3 
Query: 1035 IILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMIV 1367
            IILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKS NMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMI 
Sbjct:   18 IILYEGIKNRLSLIEPVLHKWPEAIAKMSYPTNLSKTGWMFRNLLDELWIKAGDKSTNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMIA 128
[Close]
BLAST of Ubiquinone biosynthesis protein vs. Planmine SMEST
Match: SMESG000036896.1 (SMESG000036896.1)

HSP 1 Score: 174.866 bits (442), Expect = 5.703e-51
Identity = 82/84 (97.62%), Postives = 82/84 (97.62%), Query Frame = 3 
Query: 1116 MSYPTNLSKTGWMFRNLLDELWIKAGDKSKNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMIV 1367
            MSYPTNLSKTGWMFRNLLDELWIKAGDKS NMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMI 
Sbjct:    1 MSYPTNLSKTGWMFRNLLDELWIKAGDKSTNMSWYSKRAVVGAVYSSSEMFMLQDKSQGHIETWQFLDRRLNDAESIGHVGMIA 84
The following BLAST results are available for this feature:
BLAST of Ubiquinone biosynthesis protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 4
Match NameE-valueIdentityDescription
COQ92.776e-2333.91coenzyme Q9 [Source:HGNC Symbol;Acc:HGNC:25302][more]
COQ92.825e-2333.91coenzyme Q9 [Source:HGNC Symbol;Acc:HGNC:25302][more]
COQ95.550e-1529.41coenzyme Q9 [Source:HGNC Symbol;Acc:HGNC:25302][more]
COQ91.048e-841.51coenzyme Q9 [Source:HGNC Symbol;Acc:HGNC:25302][more]
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BLAST of Ubiquinone biosynthesis protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Ubiquinone biosynthesis protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Coq91.641e-1531.00gene:FBgn0050493 transcript:FBtr0088925[more]
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BLAST of Ubiquinone biosynthesis protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
coq93.936e-2232.14coenzyme Q9 homolog (S. cerevisiae) [Source:ZFIN;A... [more]
coq93.936e-2232.14coenzyme Q9 homolog (S. cerevisiae) [Source:ZFIN;A... [more]
coq94.494e-2232.14coenzyme Q9 homolog (S. cerevisiae) [Source:ZFIN;A... [more]
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BLAST of Ubiquinone biosynthesis protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3
Match NameE-valueIdentityDescription
coq91.079e-2533.03coenzyme Q9 [Source:NCBI gene;Acc:496601][more]
coq91.244e-2533.03coenzyme Q9 [Source:NCBI gene;Acc:496601][more]
coq93.799e-2129.51coenzyme Q9 [Source:NCBI gene;Acc:496601][more]
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BLAST of Ubiquinone biosynthesis protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 3
Match NameE-valueIdentityDescription
Coq92.695e-2333.91coenzyme Q9 [Source:MGI Symbol;Acc:MGI:1915164][more]
Coq96.979e-926.09coenzyme Q9 [Source:MGI Symbol;Acc:MGI:1915164][more]
Coq91.097e-842.00coenzyme Q9 [Source:MGI Symbol;Acc:MGI:1915164][more]
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BLAST of Ubiquinone biosynthesis protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q5PPX7|COQ9B_XENLA5.524e-2634.55Ubiquinone biosynthesis protein COQ9-B, mitochondr... [more]
sp|Q3B8B2|COQ9A_XENLA1.960e-2533.03Ubiquinone biosynthesis protein COQ9-A, mitochondr... [more]
sp|Q5RJV0|COQ9_XENTR4.393e-2533.03Ubiquinone biosynthesis protein COQ9, mitochondria... [more]
sp|Q68FT1|COQ9_RAT1.125e-2334.78Ubiquinone biosynthesis protein COQ9, mitochondria... [more]
sp|O75208|COQ9_HUMAN1.232e-2233.91Ubiquinone biosynthesis protein COQ9, mitochondria... [more]
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BLAST of Ubiquinone biosynthesis protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
K1QVV91.775e-2936.28Neuron navigator 2 OS=Crassostrea gigas OX=29159 G... [more]
A0A1B6FSI42.743e-2935.71Ubiquinone biosynthesis protein OS=Cuerna arida OX... [more]
A0A1B6GGS43.897e-2935.71Ubiquinone biosynthesis protein (Fragment) OS=Cuer... [more]
A0A0P1AQ001.169e-2847.06Ubiquinone biosynthesis protein OS=Plasmopara hals... [more]
A0A015ITK52.609e-2846.94Ubiquinone biosynthesis protein OS=Rhizophagus irr... [more]
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BLAST of Ubiquinone biosynthesis protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
coq92.327e-2232.69coenzyme Q9 [Source:NCBI gene;Acc:103031824][more]
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BLAST of Ubiquinone biosynthesis protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
coq97.772e-2333.02coenzyme Q9 homolog (S. cerevisiae) [Source:ZFIN;A... [more]
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BLAST of Ubiquinone biosynthesis protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Ubiquinone biosynthesis protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO325395.036e-1834.00Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Ubiquinone biosynthesis protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
coq93.762e-2336.54coenzyme Q9 [Source:NCBI gene;Acc:101167533][more]
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BLAST of Ubiquinone biosynthesis protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3
Match NameE-valueIdentityDescription
SMESG000036896.12.434e-7898.20SMESG000036896.1[more]
SMESG000036896.13.674e-7098.20SMESG000036896.1[more]
SMESG000036896.15.703e-5197.62SMESG000036896.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30017958 ID=SMED30017958|Name=Ubiquinone biosynthesis protein|organism=Schmidtea mediterranea sexual|type=transcript|length=2707bp
ATTCATGAACTTACCACTTTTAGTGGTATTAGTTGAACGCCGACCAATTA
TTTAATTTTTAATAATTTTACTTAGAAAATATATATTTATAATCTATATC
AAATAATTAAATATCAAATAAGCCAGTAACAAATAATTATTAATATCTTG
GATTAAAATATTAAAATATTTAATTATTTAAAATACAAATTTAAACAAGT
CACAGATTTTTATTTGGTTTGTGAATTTATTTAATTGGATTATATTTATA
ACATAAATACAGATTTGGGTTGAGTAATTAAAAAGGTTTTTGCTTTTAAA
ATAAATTGATCATAAAAATTGTTTTTTTAAAAGTTCTCAATTATTCTTCA
TAATATATGTTTGATAATTTTAATTACTAATATTAGAGCCAAGGTAGTTA
TACCGAGATGTTTGTTTGAATAAAATTAACAAGGATATTTAGCATATGGG
TCTCCGTTAACAAATAAATATGCCAGCAAAACTTTTATGTATATACTCGA
TTTTTTTTTGCAAAACTAAATTCAAAAGTAAAATTAATTCATTTTCGACA
GTTATATTTAATAGTATTTTGATTGTTTTAAATTTTCAAAAGAGAGAACT
TCGTAATTTAATTTTTAAATTAGTAAAATGATAAATTCAAATGCTTTATT
TTTAAAAATAATTCAACTTAAACACATACCAATTAAATTAAGTTTTAGTT
CATCAATAATTAAAAAGCATTATACACAATCTAATAAAAATGATGAAAAG
TCTATTCCTCATATAAAAGAAGCAATTTTAAATAAAGCAATAGAATTTGT
AAGTGAAAGTGGGTGGTCTAAAGATACCATAGTTCGTGCCACAAAATCTT
TGGATTATCCTCCACACATGCATGGTATTATAGATGAAGGAGAAATGGAA
TTAATATATTATTTTTACGAAACACGAACAAACCTAATGAGTGAATACTT
AGATAAGTTGCTTAAATCTACTGATCCTAAAGACATGTATTTTATAGTTA
TAATTATTTCTTATTTTTCTCCAGAAATACTAGAATTATTTTATATGAAG
GAATTAAAAATAGACTGAGTCTAATTGAACCAGTATTACATAAATGGCCA
GAAGCAATTGCAAAAATGTCATATCCAACAAATCTATCGAAAACTGGTTG
GATGTTTCGTAACTTGTTGGATGAGTTATGGATTAAAGCCGGCGATAAAT
CGAAAAATATGTCATGGTACAGCAAACGGGCAGTTGTTGGAGCTGTGTAT
TCATCCAGTGAGATGTTTATGTTACAAGATAAATCACAAGGACATATCGA
GACGTGGCAATTCCTTGACCGTCGCCTCAACGACGCCGAATCAATTGGAC
ATGTTGGAATGATTGTGAGTTTACAAAATCATTACTTTTTATTGAATTTC
CCAATTATCTAAATTTTTTATATTATCGCATTTCCAATTTAGTTAATTTT
CATATGAGAAGGGTAACTTGACCAGGAGATTAGATTTCTCGGGATGAAAC
GTGCAATAATGCTGGTCAGTCAGAATTCTGGCTTTGTGTGATGATAGTTT
TCATTCCAAATTATTTTATAAAGATAATTTTTTATCTATTTCCTATTCAC
AATGACAAGTTCACTTATATTGGAAGTTAATAAAATCATTATAATGGAAC
TTTTCAGTAATTATTAAGAATTACTGAGAAGGATTTAATGATACCATGAA
TTTGTTGGAGTTCTACATAACAGGCACACATAAAAAATCATGCTCAAATC
AATGGAAATACGTGGAAACTTGTGTGCTAAATGATTGGACGAGTTCGAAT
ATAATGATATAAAATCTATGGGAGGTCACCAGAAGGAAATATTTTATCAG
CTAATGGAAAACCCGAGATATCAACAAAGTTATTAAATTAAATCTGGGAA
ACTCGCGAAATCAGGGAAAGCTTGAATTAAAAAGGAACTCGACAATAATA
AAATTACCTCAAAGTAAAAGCAACAAAGCTTCCCGGTCATCAATCGATTC
TCTAAAGAAATTAATTTCCCAAAAGAAAATCCAATTACCAGGGAAGTATA
TAAGAAGGAAACAAACTCACTATATTGCCAGTGTGGTCGAAGTCATAATT
GAGAAAAAAGTTTGGAACATATGAAGCTGTGGTAATTTAATTTTTTGCGT
ACAAGAAACGAGATCCACCATTGGAAGGCTTGTCCAAGTGTAAGGATAAT
GAATTATTTAAATAAGGACACCGAGAAGTCAGATTATTGAAACCAACTTT
CATTAAGGCCCGACAAATTTTTTTGACATGTTTCGCCTTATATCGATATT
GTCGTTTTCAGATAATAATGGAAAAGGAATGGCATTGATTGACCAGTTGC
AGATATTATACAAAAAAAAATGAAATATTTAAAGTAATAAAATGTCGAAT
AAATTTTTAAAATTTAATTTGAGGCGTGAACATATGAATCGGTAGTCATT
ATGATCCAATTAAATCATCAATTAATACTAATATAATAAAGCCGAATAAG
ATTATGCTACTCATTGGGTATTATTCAAGATATTATGAATTAAAAAAAAA
GAAAAATAAATCAAACTCAAGTCACATTAAAAACTAGGAAAAATTAAATC
TAAAAATTCAGCATTTCATAGAAAATGACTATTATAATGTTTGTTATTTT
TACTCAGGGATGTGCAACAGAGACCTGCACGGACCAATAAAACTTTCACC
GACTCTT
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protein sequence of SMED30017958-orf-1

>SMED30017958-orf-1 ID=SMED30017958-orf-1|Name=SMED30017958-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=147bp
MINSNALFLKIIQLKHIPIKLSFSSSIIKKHYTQSNKNDEKSIPHIKEAI
LNKAIEFVSESGWSKDTIVRATKSLDYPPHMHGIIDEGEMELIYYFYETR
TNLMSEYLDKLLKSTDPKDMYFIVIIISYFSPEILELFYMKELKID*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0005739mitochondrion
Vocabulary: molecular function
TermDefinition
GO:0008289lipid binding
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR013718COQ9
Vocabulary: biological process
TermDefinition
GO:0006744ubiquinone biosynthetic process