Alpha-int-1
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30017880 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 11
Homology
BLAST of Alpha-int-1 vs. Ensembl Human
Match: ITGAV (integrin subunit alpha V [Source:HGNC Symbol;Acc:HGNC:6150]) HSP 1 Score: 109.768 bits (273), Expect = 1.935e-23 Identity = 175/753 (23.24%), Postives = 314/753 (41.70%), Query Frame = 3
Query: 318 SYFGYSISSFI--GQKEAYCLVGAPRDEIDDESTNVNVNTGGVYRISFVNND-CSKVPMGSEGSGHVS---PGYF---NWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTD-----EGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPK--GRSPFINSFSNEVV---VTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQ-NFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPC------FGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNP----DCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEF-------QGLKGLNCTLRISEDTINVVALCQFPNPF 2462
SYFG+++ F+ + LVGAP+ V G V + + + C + + G+ + P F W G SV + + L C P + +T + +Q+ +G C + G+ + + + C D +G C S D ++ +V LG PGSF +G + + +++ K P ++ + YN + A+ + G S + F+ + + V+ P ++ G+V + D K ++S + + +G + + FG S+A D NGD D+ +GAP + D + K L ++G + + + S F+ T N +VF +FG +IA LGD+D D +D A+ P G D G VYI+ G R LN V ++ + RS +FG+S+ G DID N PDLI+G + + ++ R++ +I + + + P+ N+ +K C SC + + K G+ + K+ F+V + LD + +R + S+S +K + S L E+ + L + + KL P+ + + +++ ++ +L+ F +P ++ R DCG D C + V + +Y D +++ N GE AY +L ++IP +F + L L+C + T VV C NP
Sbjct: 47 SYFGFAVDFFVPSASSRMFLLVGAPKANTTQPGI---VEGGQVLKCDWSSTRRCQPIEFDATGNRDYAKDDPLEFKSHQWFGASVRSKQDKI----LACAPLYHWRT-----EMKQEREPVGTCFLQDGT--KTVEYAPCRSQDIDADGQGFC----QGGFSIDFTKADRVLLGGPGSFYWQGQLI------SDQVAEIVSKYDP-NVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVP--RAARTLGMVYIYDGK-NMSSLY---NFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGK-LQEVGQVSVSLQRASGDFQTTKLNGFEVF------ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNG---------RSTGLNAV----PSQILEGQWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSI-------LNQDNKTCSLPGTALKVSC-FNVRFCLKADGKGV-LPRKLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIAYLRDESEFRDKLT---PITIFMEYRLDYRTAADTTGLQP----ILNQF-------TPANISRQAHILLDCGEDNVCKPKLEVSVDSDQKKIYIGDD------NPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGVVRNNEALARLSCAFKTENQTRQVV--CDLGNPM 717
BLAST of Alpha-int-1 vs. Ensembl Human
Match: ITGAV (integrin subunit alpha V [Source:HGNC Symbol;Acc:HGNC:6150]) HSP 1 Score: 102.449 bits (254), Expect = 3.264e-21 Identity = 158/675 (23.41%), Postives = 284/675 (42.07%), Query Frame = 3
Query: 525 NWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTD-----EGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPK--GRSPFINSFSNEVV---VTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQ-NFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPC------FGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNP----DCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEF-------QGLKGLNCTLRISEDTINVVALCQFPNPF 2462
W G SV + + L C P + +T + +Q+ +G C + G+ + + + C D +G C S D ++ +V LG PGSF +G + + +++ K P ++ + YN + A+ + G S + F+ + + V+ P ++ G+V + D K ++S + + +G + + FG S+A D NGD D+ +GAP + D + K L ++G + + + S F+ T N +VF +FG +IA LGD+D D +D A+ P G D G VYI+ G R LN V ++ + RS +FG+S+ G DID N PDLI+G + + ++ R++ +I + + + P+ N+ +K C SC + + K G+ + K+ F+V + LD + +R + S+S +K + S L E+ + L + + KL P+ + + +++ ++ +L+ F +P ++ R DCG D C + V + +Y D +++ N GE AY +L ++IP +F + L L+C + T VV C NP
Sbjct: 76 QWFGASVRSKQDKI----LACAPLYHWRT-----EMKQEREPVGTCFLQDGT--KTVEYAPCRSQDIDADGQGFC----QGGFSIDFTKADRVLLGGPGSFYWQGQLI------SDQVAEIVSKYDP-NVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVP--RAARTLGMVYIYDGK-NMSSLY---NFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGK-LQEVGQVSVSLQRASGDFQTTKLNGFEVF------ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNG---------RSTGLNAV----PSQILEGQWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSI-------LNQDNKTCSLPGTALKVSC-FNVRFCLKADGKGV-LPRKLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIAYLRDESEFRDKLT---PITIFMEYRLDYRTAADTTGLQP----ILNQF-------TPANISRQAHILLDCGEDNVCKPKLEVSVDSDQKKIYIGD------DNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGVVRNNEALARLSCAFKTENQTRQVV--CDLGNPM 671
BLAST of Alpha-int-1 vs. Ensembl Human
Match: ITGA8 (integrin subunit alpha 8 [Source:HGNC Symbol;Acc:HGNC:6144]) HSP 1 Score: 100.908 bits (250), Expect = 9.885e-21 Identity = 136/577 (23.57%), Postives = 243/577 (42.11%), Query Frame = 3
Query: 273 FLVGLSKLYLHSNVN-SYFGYSISSFI-GQKEAYCLVGAPRDEIDDESTNVNVNTGGVYRISFV---NNDCSKVPMGSEGS------GHVSPGYF---NWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTD-----EGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIF-------LANFGPMSMIDKVLLKTSPSDLKNRGYN---LGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTD-HWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGG----SKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKR 1898
F + + KL ++S SYFGY++ I + A LVGAP+ V G VY + + C ++P + + G P F W G TV G + C P + +T K + +G C + + F C ++ +G C + S D + + +G PGSF +G + +AN+ ++ K L +++ Y+ LGY + S + +V P N G V ++++ + + +I + +G + S FG ++ V D N D + D++VGAP + + + S+ R ++G IY++ S F+ + G G+FG ++A+LGD++ D +D A+G P G D G V IY G + P QV++ +H + + FG++L G DID N PDLI+G + + ++ V R++ ++ ++ + L P ++E PD + + + + A V G+ I+ + I+ + LD+ + KR
Sbjct: 39 FNLDVEKLTVYSGPKGSYFGYAVDFHIPDARTASVLVGAPKANTSQPDI---VEGGAVYYCPWPAEGSAQCRQIPFDTTNNRKIRVNGTKEPIEFKSNQWFGA----TVKAHKGKVVACAPLYHWRTL----KPTPEKDPVGTCYVAIQNFSAYAEFSPCRNSNADPEGQGYC----QAGFSLDFYKNGDLIVGGPGSFYWQGQVITASVADIIANYSFKDILRK-LAGEKQTEVAPASYDDSYLGYSVAAGEF-----------TGDSQQELVAGIPRGAQN--FGYVSIINS----TDMTFIQNFTGEQMASYFGYTVVVSDVNSDGLDDVLVGAPLFMEREFESNPR--EVGQIYLYLQVSSLLFR-----DPQILTGTETFGRFGSAMAHLGDLNQDGYNDIAIGVPFAGKDQRGKVLIYNGNKDGLNTKPSQVLQGVWASHAVPS----------------GFGFTLRGDSDIDKNDYPDLIVGAFGTGKVAVYRARPVVTVDAQLLLHPMIINLENKTCQVPDS--MTSAACFSLRVCASVTGQSIANT--IVLMAEVQLDSLKQKGAIKR 555 HSP 2 Score: 68.9366 bits (167), Expect = 6.210e-11 Identity = 119/491 (24.24%), Postives = 205/491 (41.75%), Query Frame = 3
Query: 2181 DCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEF-------QGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFD---KSNNKGSIDYFLRLAGFVHVAPENLEGIYVDSRNFSSKISPLQRVYP-------------ETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYF--LKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLK-QNYRNKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIEDMMISTLPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHRQYKAEIIE 3575
DCG D CV D++ LS+ K + ++ + ++I N GE AY +L + IP+ ++ +G + L+C ++ T VV C NP V+ N +G ++E T + +FD +S+NK + D + FV + V+ R S P Q V P E +GP + + + N+GPS + L + PF ++ E +LY ++ + NP +I+ PQ I + PED+ + L+A RN + KR V +E + +P K I++C N +EC+ I C + L +++++R WA TF K + + + + + Y + L + I +VI+ ++ S +P+W I+L LLGL++L ++ L LWKCGFF R R + ++ +
Sbjct: 640 DCGEDNLCVPDLK-----LSARPDKHQVIIGDENHL-MLIINARNEGEGAYEAELFVMIPEEADYVGIERNNKGFRPLSCEYKMENVTRMVV--CDLGNPMVSGTNY----------------------SLGLRFAVPRLEKTNMSINFDLQIRSSNKDNPD-----SNFVSLQINITAVAQVEIRGVSH---PPQIVLPIHNWEPEEEPHKEEEVGPLVEHIYELHNIGPSTISDTILEVGWPF-SARDEFLLYIFHIQTLGPLQCQPNP-NIN--PQDIKPAAS-------PEDTPE---LSAFLRNSTIPHLVRKRDVHVVEF---HRQSPAK--------------ILNCTN-------IECLQISCAVGRLEGGESAVLKVRSRLWAHTFLQRKNDPYALASLVSFEVKKMPYT-DQPAKLPEGSIVIKTSVIW-ATPNVSFS-IPLWVIILAILLGLLVLAILTLALWKCGFFDRARPPQEDMTD 1051
BLAST of Alpha-int-1 vs. Ensembl Human
Match: ITGA3 (integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]) HSP 1 Score: 99.3673 bits (246), Expect = 2.749e-20 Identity = 135/484 (27.89%), Postives = 213/484 (44.01%), Query Frame = 3
Query: 309 NVNSYFGYSIS---SFIGQKEAYCLVGAPRD-EIDDESTNVNVNTGGVYRISFV--NNDCSKVPMGSEGSGHVSPGYF----NWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDIS--------FLACSVTD---EGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRG-YNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTK----LDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLI 1682
N S FGYS++ Q+ L GAPR+ + D TN TG VY +DC ++ + + PG+ WLG +V++ G G L C R+ G SE Q +G+C + D S + S TD G C ++ + V G PG++ +GN ++ + + L + S D +++G +GY +++ PK N +VT +P + + G V +L + L Q+L +G+ FG+++A+ D N D D++VGAP+Y + K V GAIY+F Q F ++ + + G + FG+S+A++GDI+ D D AVG P G G VYIY SK +L PQ +K + FG+SL+G+ D+D N PDL++G S IV+LR++ +I
Sbjct: 47 NPGSLFGYSVALHRQTERQQRYLLLAGAPRELAVPDGYTN---RTGAVYLCPLTAHKDDCERMNITVKND----PGHHIIEDMWLGVTVAS--QGPAGRVLVCAHRYTQVLWSG---SEDQRRMVGKCYVRGNDLELDSSDDWQTYHNEMCNSNTDYLETGMC-----QLGTSGGFTQNTVYFGAPGAYNWKGNSYM-----IQRKEWDLSEYSYKDPEDQGNLYIGYTMQVGSFILHPK----------NITIVTGAPR---HRHMGAVFLLSQEAGGDLRRRQVLE----GSQVGAYFGSAIALADLNNDGWQDLLVGAPYYFER----KEEVG-GAIYVFMNQAGTSFP---AHPSLLLHGPS-GSAFGLSVASIGDINQDGFQDIAVGAPFEG---LGKVYIYHSSSK------------GLLRQPQQVIHGEKLGLPGLATFGYSLSGQMDVDENFYPDLLVGSL-SDHIVLLRARPVI 466
BLAST of Alpha-int-1 vs. Ensembl Human
Match: ITGA3 (integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]) HSP 1 Score: 98.9821 bits (245), Expect = 3.228e-20 Identity = 135/484 (27.89%), Postives = 213/484 (44.01%), Query Frame = 3
Query: 309 NVNSYFGYSIS---SFIGQKEAYCLVGAPRD-EIDDESTNVNVNTGGVYRISFV--NNDCSKVPMGSEGSGHVSPGYF----NWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDIS--------FLACSVTD---EGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRG-YNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTK----LDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLI 1682
N S FGYS++ Q+ L GAPR+ + D TN TG VY +DC ++ + + PG+ WLG +V++ G G L C R+ G SE Q +G+C + D S + S TD G C ++ + V G PG++ +GN ++ + + L + S D +++G +GY +++ PK N +VT +P + + G V +L + L Q+L +G+ FG+++A+ D N D D++VGAP+Y + K V GAIY+F Q F ++ + + G + FG+S+A++GDI+ D D AVG P G G VYIY SK +L PQ +K + FG+SL+G+ D+D N PDL++G S IV+LR++ +I
Sbjct: 47 NPGSLFGYSVALHRQTERQQRYLLLAGAPRELAVPDGYTN---RTGAVYLCPLTAHKDDCERMNITVKND----PGHHIIEDMWLGVTVAS--QGPAGRVLVCAHRYTQVLWSG---SEDQRRMVGKCYVRGNDLELDSSDDWQTYHNEMCNSNTDYLETGMC-----QLGTSGGFTQNTVYFGAPGAYNWKGNSYM-----IQRKEWDLSEYSYKDPEDQGNLYIGYTMQVGSFILHPK----------NITIVTGAPR---HRHMGAVFLLSQEAGGDLRRRQVLE----GSQVGAYFGSAIALADLNNDGWQDLLVGAPYYFER----KEEVG-GAIYVFMNQAGTSFP---AHPSLLLHGPS-GSAFGLSVASIGDINQDGFQDIAVGAPFEG---LGKVYIYHSSSK------------GLLRQPQQVIHGEKLGLPGLATFGYSLSGQMDVDENFYPDLLVGSL-SDHIVLLRARPVI 466
BLAST of Alpha-int-1 vs. Ensembl Celegans
Match: ina-1 (Integrin alpha ina-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03600]) HSP 1 Score: 88.5817 bits (218), Expect = 2.060e-17 Identity = 135/504 (26.79%), Postives = 220/504 (43.65%), Query Frame = 3
Query: 324 FGYSISSFIGQKEAYCLVGAPRDEIDDESTN-------VNVNT---GG------VYRISFVN-NDCSKVPMGSEGSGHVSPGYFNWLGGSVSTTVNGSNGVQLGCDP--RFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTS---------PSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVL------DTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDI---GAIYIFYGQVSDKFKYT---VSNQNDVFKGVNVRGKFGMSIANLXXXX--XXXXXXFAVGCPNCGNDATGSVYIYLGGS------KVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLE 1691
FGYS++ + L+GAPR E T ++NT GG R + N D +K P + G G + L S + NG L C P R+ +Y + + S Y +++ + G C+ GFS++++ + + G+ G+ G +F A ++ D V+ K + + L Y LGY + + R + + P VV+ + + + G V+ L +KL L++ +I + + +GS FG S+ V D NGD D+IVGAPF + +D G +Y+++ Q + ++ V + + K + +FG+SI LG++D ++DFAVG P D G+VYIYLG K P QVI+ +L ++ P MRSF G+SL+G D+D N PDL+IG S + + +LRS+ +I +E
Sbjct: 38 FGYSVAEHFKGDKPVMLIGAPRGESGQTGTERAGAMYACDINTFYNGGSNHWCEQVRFEYENVEDYAKRPNETRGRTVHPLGKNDQLLASTIVSKGTKNGSALVCAPLIRYHQTAAYPQGACYELESNLRLQSTYATCAQKNLP-TTDRHNEYGGCMEGFSAAIT-----QDTIVTGLIGAVKWTGGVF-AKKSSANIFDSVVEKYTMNQPNGDMIRTRLVAHDY-LGYSVDIGRFGFWYEDGKPI-------TVVSGATRYGEH---GAVIFLPFIQDSSSKLTLNEDKFIINGTA-MGSAFGYSIEVVDLNGDGFDDLIVGAPF------EHRSGIDGNFGGIVYVYFSQGVQRKQHESHLVFHPPKILKNPDFYSQFGLSITKLGNVDGDKSKLNDFAVGAP-FAFDGAGAVYIYLGTKNIEKFRKKPAQVIKGNDLPNL---PPGG-------MRSF---GFSLSGGSDMDENGYPDLLIGSPSKNFVALLRSRPVISIE 502
BLAST of Alpha-int-1 vs. Ensembl Celegans
Match: pat-2 (Integrin alpha pat-2 [Source:UniProtKB/Swiss-Prot;Acc:P34446]) HSP 1 Score: 81.2629 bits (199), Expect = 4.305e-15 Identity = 65/230 (28.26%), Postives = 108/230 (46.96%), Query Frame = 3
Query: 1026 KSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWT-------SSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGS----KVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLI 1682
+ N+ G +++ +KL + I ++S G G S+AV D N D DII+G PFYTD+ + K D+G + + F ++ G + G+FG ++A GD++ D +D VG P G + G+VY+ G ++P Q I N+ H + ++FG+SL G D+DGN +PD+ +G + S VL +K ++
Sbjct: 270 RGNDLHGKLVLYTSKLKM-MINLTDEVSTQHGQYCGGSVAVADVNKDGRDDIIMGCPFYTDYGSVKDAKTQERKPQYDVGKVIVMLQTAPGVFGKQIA-----VVGDDQWGRFGHAVAAAGDLNLDGYNDVIVGAPYAGKNKQGAVYVIHGSKDGVRELPTQKIEGANIGH----------------GNIKSFGFSLTGNEDVDGNGMPDIAVGAWKSGNAAVLLTKPVV 477
BLAST of Alpha-int-1 vs. Ensembl Fly
Match: if (gene:FBgn0001250 transcript:FBtr0301352) HSP 1 Score: 103.605 bits (257), Expect = 8.049e-22 Identity = 134/496 (27.02%), Postives = 230/496 (46.37%), Query Frame = 3
Query: 315 NSYFGYSISSFIG-------QKEAYCLVGAPRDEIDDESTNVNVNTGGVYRISFVNNDCSKVPMGSEGSGH------VSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTD------EGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIF-YGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIY----LGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSI 1727
NS FG+SI+ G Q +VGAP+ + V GGV++ S ++DC VP S+G+ V + WLG +V+T + + + C PR++ T ++ +G C +T + ++ T+ +G+C +GFS++++ + S ++ +G PGS+ +G +A+ ++ + + TS S N LGY + F S +V + RG LV ++ + I +++G +G FG SLA D +GD + D+++GAP YTD + D+G +YI G +++ ++T + D G + +G+FG+++ LGD++GD DFAVG P G + G VYI+ +G P Q+I+ L P+ FG++L+G D+DGN+ PDL +G YSS Q+ + +S+ + + SK I
Sbjct: 47 NSMFGFSIAMHKGRSGFYGNQNNVSLIVGAPKFDTSRYQQGV-TEAGGVFKCSLNDDDCKLVPFDSKGNNRNVDKEVVDRKSYQWLGATVATGRDSD--LVVACAPRYVFHTM--TPSRAFRIDPVGTC--FTSHNFEEFYEVSPCRTNNWGYHRQGSCQAGFSAAINGNGS---RLFIGAPGSWYWQG---MASSHDVTRPENQVFSTSESASVNDDSYLGYSMVTGD----------FDGDRSEDVAIGMP--------RGGNLVGRIVVNRWNMANIFNITGRQIGEYFGYSLATSDVDGDGLDDLLIGAPMYTDPDNVEGKY-DVGRVYILLQGGPTEEKRWTTEHIRD---GYHSKGRFGLALTTLGDVNGDGYGDFAVGAPYDGPEGRGVVYIFHGSPMGPLAKPSQIIKSEQLVEGAPYPRT--------------FGFALSGGLDMDGNTYPDLAVGAYSSDQVFIFKSRPVAAVNAETSFASNSKLI 493
BLAST of Alpha-int-1 vs. Ensembl Fly
Match: mew (gene:FBgn0004456 transcript:FBtr0340190) HSP 1 Score: 100.908 bits (250), Expect = 4.588e-21 Identity = 135/498 (27.11%), Postives = 216/498 (43.37%), Query Frame = 3
Query: 315 NSYFGYSISSFI-----GQKEAYC-LVGAPRDEIDDESTNVNVNTGGVYRISFVN--NDCSKVPMGSE---GSGHVSP------GYFNWLGGSVSTT---VNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLAC-------SVTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMI-DKVLLKTSPSDLK---NRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYG-QVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSK----VPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPV 1700
+S+FGYS+++ G + C LVGAP D+ +T ++G ++R +DC +V S +SP W+G +V + NGS G + C R++ Y V ++ G G C + T + C D G C + SA + + LG PG + G+I++ G + DK + SDL ++ LG + R F + +P +E G V++ D D ++ GS+FG LA D NGD D+IV AP Y +T ++ GA+Y++ Q + KYT+ G + +FG+++AN+GD++ D+ +D AVG P GN G VYIYLG S+ P Q I+ L + Q + FG S++G D+D NS PD++IG ++SS V+L ++ +I ++ V
Sbjct: 49 HSHFGYSVATHTIGEANGPNKTNCVLVGAPLDQNRQPNT---THSGALWRCPMTQRFDDCEQVITDGRRNFDSEILSPPGNDEIKEDQWMGVTVRSNPLQANGSGGKVIVCAHRYM----YIVRENR---YGQGLCYLLTNDLQFEEVHEPCKGRPVQRQHEDYGLC----QAGTSAALLDDDTMVLGSPGPYTWRGSIWVTQVGGEYLQRDKTTYYSDHSDLNSPVDKYSYLGMSVTGGRF-------------FGHMSYAAGAPR---SEGHGQVVIFDKSTDNPIPVHSILDGEQFGSSFGYELATADINGDHRPDLIVAAPLY---FTKTEG----GAVYVYQNIQDTLPMKYTLK-----LTGP-LESRFGLALANIGDLNKDNCEDLAVGAPYEGN---GVVYIYLGSSQGLNSKPAQKIQASELGGTIPNGQ-----------PIRTFGISISGNTDLDDNSYPDVVIGAFNSSAAVILLARPIISIQTSV 489
BLAST of Alpha-int-1 vs. Ensembl Fly
Match: mew (gene:FBgn0004456 transcript:FBtr0073732) HSP 1 Score: 100.523 bits (249), Expect = 5.746e-21 Identity = 133/500 (26.60%), Postives = 216/500 (43.20%), Query Frame = 3
Query: 315 NSYFGYSISSFI-----GQKEAYC-LVGAPRDEIDDESTNVNVNTGGVYRISFVN--NDCSKVP-----------MGSEGSGHVSPGYFNWLGGSVSTT---VNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLAC-------SVTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMI-DKVLLKTSPSDLK---NRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYG-QVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSK----VPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPV 1700
+S+FGYS+++ G + C LVGAP D+ +T ++G ++R +DC +V + G+ + W+G +V + NGS G + C R++ Y V ++ G G C + T + C D G C + SA + + LG PG + G+I++ G + DK + SDL ++ LG + R F + +P +E G V++ D D ++ GS+FG LA D NGD D+IV AP Y +T ++ GA+Y++ Q + KYT+ G + +FG+++AN+GD++ D+ +D AVG P GN G VYIYLG S+ P Q I+ L + Q + FG S++G D+D NS PD++IG ++SS V+L ++ +I ++ V
Sbjct: 49 HSHFGYSVATHTIGEANGPNKTNCVLVGAPLDQNRQPNT---THSGALWRCPMTQRFDDCEQVITDGRRNFDSEILSPPGNDEIKED--QWMGVTVRSNPLQANGSGGKVIVCAHRYM----YIVRENR---YGQGLCYLLTNDLQFEEVHEPCKGRPVQRQHEDYGLC----QAGTSAALLDDDTMVLGSPGPYTWRGSIWVTQVGGEYLQRDKTTYYSDHSDLNSPVDKYSYLGMSVTGGRF-------------FGHMSYAAGAPR---SEGHGQVVIFDKSTDNPIPVHSILDGEQFGSSFGYELATADINGDHRPDLIVAAPLY---FTKTEG----GAVYVYQNIQDTLPMKYTLK-----LTGP-LESRFGLALANIGDLNKDNCEDLAVGAPYEGN---GVVYIYLGSSQGLNSKPAQKIQASELGGTIPNGQ-----------PIRTFGISISGNTDLDDNSYPDVVIGAFNSSAAVILLARPIISIQTSV 489
BLAST of Alpha-int-1 vs. Ensembl Fly
Match: mew (gene:FBgn0004456 transcript:FBtr0310647) HSP 1 Score: 98.5969 bits (244), Expect = 2.490e-20 Identity = 136/507 (26.82%), Postives = 217/507 (42.80%), Query Frame = 3
Query: 315 NSYFGYSISSFI-----GQKEAYC-LVGAPRDEIDDESTNVNVNTGGVYRISFVN--NDCSKVPM-GSEGSGHVS------------PG-----YFNWLGGSVSTT---VNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLAC-------SVTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMI-DKVLLKTSPSDLK---NRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYG-QVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSK----VPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPV 1700
+S+FGYS+++ G + C LVGAP D+ +T ++G ++R +DC +V G +G PG W+G +V + NGS G + C R++ Y V ++ G G C + T + C D G C + SA + + LG PG + G+I++ G + DK + SDL ++ LG + R F + +P +E G V++ D D ++ GS+FG LA D NGD D+IV AP Y +T ++ GA+Y++ Q + KYT+ G + +FG+++AN+GD++ D+ +D AVG P GN G VYIYLG S+ P Q I+ L + Q + FG S++G D+D NS PD++IG ++SS V+L ++ +I ++ V
Sbjct: 49 HSHFGYSVATHTIGEANGPNKTNCVLVGAPLDQNRQPNT---THSGALWRCPMTQRFDDCEQVITDGRRTNGAYEINKHFDSEILSPPGNDEIKEDQWMGVTVRSNPLQANGSGGKVIVCAHRYM----YIVRENR---YGQGLCYLLTNDLQFEEVHEPCKGRPVQRQHEDYGLC----QAGTSAALLDDDTMVLGSPGPYTWRGSIWVTQVGGEYLQRDKTTYYSDHSDLNSPVDKYSYLGMSVTGGRF-------------FGHMSYAAGAPR---SEGHGQVVIFDKSTDNPIPVHSILDGEQFGSSFGYELATADINGDHRPDLIVAAPLY---FTKTEG----GAVYVYQNIQDTLPMKYTLK-----LTGP-LESRFGLALANIGDLNKDNCEDLAVGAPYEGN---GVVYIYLGSSQGLNSKPAQKIQASELGGTIPNGQ-----------PIRTFGISISGNTDLDDNSYPDVVIGAFNSSAAVILLARPIISIQTSV 498
BLAST of Alpha-int-1 vs. Ensembl Fly
Match: mew (gene:FBgn0004456 transcript:FBtr0330398) HSP 1 Score: 90.5077 bits (223), Expect = 6.407e-18 Identity = 113/411 (27.49%), Postives = 179/411 (43.55%), Query Frame = 3
Query: 525 NWLGGSVSTT---VNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLAC-------SVTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMI-DKVLLKTSPSDLK---NRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYG-QVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSK----VPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPV 1700
W+G +V + NGS G + C R++ Y V ++ G G C + T + C D G C + SA + + LG PG + G+I++ G + DK + SDL ++ LG + R F + +P +E G V++ D D ++ GS+FG LA D NGD D+IV AP Y +T ++ GA+Y++ Q + KYT+ G + +FG+++AN+GD++ D+ +D AVG P GN G VYIYLG S+ P Q I+ L + Q + FG S++G D+D NS PD++IG ++SS V+L ++ +I ++ V
Sbjct: 36 QWMGVTVRSNPLQANGSGGKVIVCAHRYM----YIVRENR---YGQGLCYLLTNDLQFEEVHEPCKGRPVQRQHEDYGLC----QAGTSAALLDDDTMVLGSPGPYTWRGSIWVTQVGGEYLQRDKTTYYSDHSDLNSPVDKYSYLGMSVTGGRF-------------FGHMSYAAGAPR---SEGHGQVVIFDKSTDNPIPVHSILDGEQFGSSFGYELATADINGDHRPDLIVAAPLY---FTKTEG----GAVYVYQNIQDTLPMKYTLK-----LTGP-LESRFGLALANIGDLNKDNCEDLAVGAPYEGN---GVVYIYLGSSQGLNSKPAQKIQASELGGTIPNGQ-----------PIRTFGISISGNTDLDDNSYPDVVIGAFNSSAAVILLARPIISIQTSV 392
BLAST of Alpha-int-1 vs. Ensembl Zebrafish
Match: itga3b (integrin, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-050411-55]) HSP 1 Score: 136.732 bits (343), Expect = 5.723e-32 Identity = 231/962 (24.01%), Postives = 402/962 (41.79%), Query Frame = 3
Query: 318 SYFGYSISSFIGQKEA---YCLVGAPRDEIDDESTNVNVN-TGGVYR--ISFVNNDCSKVPMGSE-GSGHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDIS-------FLACSVTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNL--GY----DIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTK-LDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGG----SKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLE-----NPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRV---FISDLSSSLYKTDIYYKEKYQIRQVVIGIGNW------GENAYNVKLKITIPKVLEFQGLK---GLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHVAPENLEGIYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGP--SPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVET 3071
S FG+S++ ++A LVGAP+++ + + +N TG VY I+ +DC + + S S + G WLG +V++ NG G L C R++ K + EQQ + +G+C + D S + C + + +S +EK V G PGSF +G + + S S L +N+ GY DIKL RS F VV +P +E++G V++ D + L L Q++ I +GS FG+ LAV D N D D+IVGAPFY D + GA+YIF + + F+ S V KG G FG ++A +GD++ D D AVG P +G VYI++G +K P QVI ++L FQ FG+SL+G D+DGN PD+++G +I +LRS+ +I L P ++P+ I K K CF Y RK +I + ID D ++ R++ + +K S T L++S S S E+ + P +++ QP++ ++++S +++ ++ + + + G + + + + +CG D C S++++ F + + + + + +++ + N E+A+ L I+IP L++ G++ G + E I C NPF +N+ + T G ++ T +++ + + + + L + + + +LE + +D+ + I +G P + F + LG L + + P+ +NG+ +LY + I IKG++ +C P + ++ LNL + K RNKR V++
Sbjct: 39 SLFGFSVALHKQTEKAKKNLLLVGAPQEKAHPQLSKFKINETGAVYYCPITVNQDDCGSMDLISPPKSTDMLEGM--WLGVTVASQRNG--GRVLACGHRYVKKL---LGAEEQQRM-VGKCYVRGNDLSYDPSDYWQSETYELCDFNHDQDLEGMCNMGISGGMTEK-DVYFGTPGSFTWQGTVHMKCRDTDSDYAGDANDRSFGKLGEDKFNIYIGYSVLEDIKLL-------DRSVF-------TVVMGAPR---DEFKGSVILADKQDLILKQLMTIT--GEQIGSYFGSCLAVTDLNNDDWNDLIVGAPFYFDRYKEEG-----GAVYIFMNE-NGSFQKKASL---VLKGKKGSG-FGFAVAAVGDVNQDGFQDIAVGAP---FQDSGKVYIWMGSKSGITKEPSQVIEGKSLGP----------------SGFQTFGYSLSGGMDMDGNDYPDILVGSL-DDRIALLRSRPVIHLSKNFTVEPKIVIPSQCGISCIKV----KVCFS-----YTLSNGNSNFRK-----EITVKFTIDAD---QNRRGARVRFIDNKQSTFTGLLSFSAS---SCQELELSVNNPVTDKL-----QPIVFSLNVSLNQQKAAAQQTLQSLDSFPV--LSGQQILTDKAEINFHKECGDDNRCSSNLQLKARFADENYNPFPSQTLEFSSNVKKLVLMVEVSNTADENKPAEDAHQATLNISIPYSLKYSGVRPPAGFDMECSADEAVI-----CDLGNPFKSNQKV--SFIIIFETSGI-------------TLYTEQIQSQLQLSTISEQADLFPVLVTLNVKNTI-LTTFSLEKLIIDTSFSGNVIGESAMSSTSDVGSPLEFVFRVQVLGEPLGDLGTLVIDFDWPYAVANGKWLLYLTE--------------------IVIKGSSESHCVPPGNIVNYLNLTLSKEGTK---RNKREVDS 871
BLAST of Alpha-int-1 vs. Ensembl Zebrafish
Match: itga8 (integrin, alpha 8 [Source:ZFIN;Acc:ZDB-GENE-080220-48]) HSP 1 Score: 131.339 bits (329), Expect = 2.341e-30 Identity = 215/924 (23.27%), Postives = 380/924 (41.13%), Query Frame = 3
Query: 318 SYFGYSISSFIGQKE---AYCLVGAPRDEIDDESTNVNVNTGGVYRISFVNND---CSKVPMGSEGS------GHVSPGYF---NWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTD-----EGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKT------------SPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQG-------LKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHVAPENLEGIYVDSRNFSSKISPLQRVYP-------ETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQ------QDSSGNPISIS 2930
SYFGYS+ + ++ LVGAP+ V G VY + +D C ++P + G P F W G +V T G + C P + +T K ++ +G C + + + C + +G C + S D +++ + +G PGSF +G + A G +++ LKT + SD + Y LGY + + S + +V P N G V V++ + + +I + +G + S FG ++AV D NGD + D++VGAP Y D SK ++G +Y++ + F ++ G+++ G++G +IA LGDI+ D D A+G P G D G V+IY G + +++ D FG++L G D+D N PDL++G + S++V RS+ ++ ++ + L P + E P+ +C +++ AK++G I + + R+ + LD + KR+ + S ++ L L + + KL+ P+ V ++ S +S + + + H K + + + I L DCG D C+ D++ LS+ + +T++ + + + I N GE AY +L +T+P ++ G L+ LNC R DT VV C NP V + N L++ + ++ IG +V+ N+D N S+ L L+ V A + G+ + + + P R P + +GP Q + + N GPS + + L + P + E++LY L+ I+ +SS NP+ +
Sbjct: 53 SYFGYSLDFYHPTQDRNVMSVLVGAPKANTSQPGI---VEGGAVYYCPWPASDPDSCRQIPFDKANNRMIKVNGTREPLEFKSHQWFGATVRT----HKGKVVACAPLYQWRTV----KVSSEMDPVGTCYVAVQNFSAYAEYSPCRTNNPDPEGQGFC----QAGFSVDFTKEGTLVVGGPGSFYWQGQVITA--GVAEILNGYSLKTILRKVQGEKQTVAASDTYDDSY-LGYSVAVGEF-----------TGDSEQELVAGVPRGAHN--FGYVTVINA----TNLTFIQNFTGEQMASYFGYTIAVTDLNGDGLDDVLVGAPLYMDREFESKPR-EVGRVYLYLQEDVLLFSPPIT-----LTGMHLFGRYGSAIAPLGDINQDGYLDVAIGAPFAGEDRGGRVFIYNGQK------------SGLMLQASQVLKGDWASSGIPAGFGFTLRGDSDLDNNQYPDLLVGAFGVSKVVAYRSRPVVTVDAQLILRPRILNPEDKSCRMPNSDIMV-TC-LSVNVCAKISG--IGIPDYVALRMELQLDWLKQRGAVKRVLFMDSHQHQRSQQLVLGQGDRQHCHNYSVYLRDEAEFRDKLS---PISVTLNYSLDQSSPPAGLQLRPV---LDHYSKTFHHEQANILL----DCGEDNMCIPDLK-----LSAKMDRTELIIGDD-NLLMLTINAANEGEGAYEAELHVTLPPEADYIGVERRREDLQRLNCEHRTENDTRIVV--CDLGNPMVADTN------LSVGLRFSVARLEDAPPTIG-----FEVQIHSSNKD-----NSRSVPVNLTLS-IVARAEVEIRGV----SHPAQVVLPFPRWEPKEKPVREDEVGPQVQHIYELHNKGPSSISRTVLEVGWPSRYRE-EHLLYALQVITDGPVHCSTNSSLNPLELE 879
BLAST of Alpha-int-1 vs. Ensembl Zebrafish
Match: itgav (integrin, alpha V [Source:ZFIN;Acc:ZDB-GENE-060616-382]) HSP 1 Score: 110.923 bits (276), Expect = 5.147e-24 Identity = 220/960 (22.92%), Postives = 385/960 (40.10%), Query Frame = 3
Query: 528 WLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLAC-----SVTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKV----------LLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKA-----KVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQ--IKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNP----DCGSDYNCVSDIRV-FISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEF-------QGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHV----APENLEGIYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFF 3290
W G TV S L C P + T YG ++ E +G C + G+ I + + C S +G C + SAD +K +V +G PGSF +G + + +I++ L T P+ + LGY + + N + VT P + + G V + + + + + + +G + + FG+S+A D N D +D+ VGAP + D + K L ++G +Y++ G+ F + G + ++G S+ ++GD++ D +D A+ P G G VYI+ G S P V + VL S + +FG+S+ G D+D N PDLI+G + + + ++ R++ PV + T+ I N DK C S +S K +G+ +S ++F+V + LD KR+ + +K S +K N TV GL + I + ++ I IS+ + + + + +L S+P ++ + DCG D C D+++ +SD + +IY + + + + N GE AY L +T+P +F + L L+C + +D V +C NP + L +++ S ++ + K G ++++ T NQ F+ ++N S+ L + V + APE +++ N+ K +P V + +GP Q + + N GPS K L + P++ +NG ++LY K S+ G NC + ++PLN+ + R L QN + E + V + K EI+ C G+ EC I C + L + I +R TF
Sbjct: 119 WFGA----TVRSSGDQILACAPLYQWST-YGFSEREP----VGTCYLKKGNNI--VEYSPCRSKSNSPEGQGFC----QAGFSADFVKKNRVVIGGPGSFYWQGQLISDDV--TEVINRYNKEFLTPYSNQLSTKPAGAQYDDSYLGYSVAVGDF-----------NEDGEDDYVTGVP--RGEKALGYVNIFNGR----NMESMYNFTGTQMAAYFGHSVAAVDVNNDGKMDLFVGAPLFMDRGSDGK-LREVGQVYVYLGKGGFTFNSVIK-----LTGSEIYARYGSSVCSVGDLNMDGYNDVAIAAPYGGPFHRGLVYIHNGRSTGPNPVA-----SQVLEGTWAS-------VSMPSSFGYSMNGGTDVDQNGYPDLIVGAFGADKAILYRAR-------PVISVNTTLDISPQILNPEDKSCTLPSTATKVSCFTVKYCLKASGKGAPSS--LLFQVDLTLDRLKHKGAIKRVLFLYNKMSHYSK---------NMTVNNNQGLACEELQAYLIDDSEFRDKITPISVFMEYSLDFKSAADKTGLLPILDQ-------SAPTNVTKQAHILLDCGEDNICKPDLKLSVVSD------QNEIYIGDDNPL-TLEVTAENGGEGAYEADLIVTLPSQADFTAVVRNSETLSRLSCAFK--KDNQTRVVVCDLGNPMKGGTKIVAGLRFSVHQ----LSEQDTEVKFG-----LQIQST--NQ-FNNTSNLVSVVTKLAVLAKVELRGVSAPEQ---VFLPIANWQPKENP---VLEDDIGPLVQHIYELRNKGPSTFSKAILDVQWPYRFNNG-SLLYITK--------------------FSVDGNM--NCSSNRE-LNPLNVTS-PRFLDQNDTSASGAEG------RNRHNVHRRDLEEKHGEENLEILDC-------GNAECQEIKCFVGRLEKGQSAILFIYSRLAVNTFL 936
BLAST of Alpha-int-1 vs. Ensembl Zebrafish
Match: itga2b (integrin, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-051031-1]) HSP 1 Score: 110.153 bits (274), Expect = 7.832e-24 Identity = 184/777 (23.68%), Postives = 323/777 (41.57%), Query Frame = 3
Query: 315 NSYFGYSISSF-IGQKEAYCLVGAPRDEIDDESTNVNVNTGGVYRISFVN--NDCSKVPMGSEGSGHVSPGYF--------NWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLAC-----------SVTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPM-----SMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVV---VTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSK-VPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKA-----KVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEI---FSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQGL-------KGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTL 2504
+SYFG+S+ + K +VGAPR + + + G V+ + C + +G +++ G WLG SV T N L C P F + V++ E +G C + T ++ C D C + + D ++ +V LG PG + +G I A+ + S K + + R Y YD+ L G S F+N+ + V P+ G V +++ QI+ +SG + S FG+S+AV D N D DI++GAP + + S+++ ++G +Y++ + F S N + G G+FG +IA LGD+D D +D AVG P G+ G V+IYLG S + Q ++ V+ +P S +D FG+S+ G DID N PDLIIG + +S++V R++ ++ + + P N DK C Y++ +V+G +I ++I+F + LD +++ +R L+ S Y N+ S ++ ++ F+ + P F+ KL+ P+ ++++ S + ++ +LH G + N CG D C+ D+++ ++ T+ ++I N GE AY +L I+ P +QG+ L C + ++ +V+ +C NP + LY ++
Sbjct: 39 DSYFGFSVDFYQSSSKSVSVVVGAPRANTNQSGVS---HGGSVFMCPWATRGQSCQTLNFDQKGDENITFGNMLLMAHKSNQWLGASVRTY----NNYILACAPLF--HWNVLVDQEEAMNTPVGNCQLLNMKTGELANYAPCREEYVDAIYTRGYPDRRYC----EAGFTTDITKNGRVVLGAPGGYYFQGQIITASLVNIMSSGSSFTPKHSMNGETKTPQRRDY---YDLYL--------GYSVAAGKFNNDNIPDYVVGVPN--DLHTAGSVKIINGATVPLQIMKA--ISGTQIASYFGHSVAVTDINRDGWDDILIGAPLFMEQL-STQKFREVGQVYVYLQRNDFSF---ASRPNQILAGTYAYGRFGSAIAPLGDLDHDGFNDVAVGAP--GSVDGGKVFIYLGKSGGLSTQYVQ------VIESPFRSLIDPPM-------FGFSIRGGTDIDDNGYPDLIIGAWGASKVVTYRAQAVVRTQARLSFFP-------DLLNPEDKFCQLQQSGTYITCFTIMACIRVSGHRI--PQQIVFNTELQLD-RMKQSMARRTLLLDSNQ----PYTNFQISVDRNSRDVCRNFTAYLLPEFKD-KLS---PIFISVNYSLADSQNA-----------VLH---GQSVAVGQTRIILN--CGPDNVCIPDLQL------KAVASTEPILIGDENPALLIIEAENQGEGAYETELYISPPANTHYQGVLSNHEDFSALVCGQK--KENGSVIVVCDLGNPMEAGQQLKAGLYFSM 726
BLAST of Alpha-int-1 vs. Ensembl Zebrafish
Match: itga3a (integrin, alpha 3a [Source:ZFIN;Acc:ZDB-GENE-090805-3]) HSP 1 Score: 101.293 bits (251), Expect = 4.482e-21 Identity = 146/513 (28.46%), Postives = 225/513 (43.86%), Query Frame = 3
Query: 318 SYFGYSIS---SFIGQKEAYCLVGAPRDEIDDESTNVNVNTGGVYR--ISFVNNDCSKVPMGSEGSGHVSPGYFN------WLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQC-----------SIYTGSTIRDISFLACSVTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVL---VLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGG----SKVPVQVIRPRNLNHVLVTPQCSYMDDKEIM-RSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCF 1766
S FG S++ + +K LVGAP+++ ES TG VY IS + DC+++ + S P N WLG S+ + + G + C R++ + IG+C S Y + +I + EG CL G S++V+ ++ G PG F +GNIF P LLK+ D + +GY + + KG+ + VVT +P +E +G V+ VL + + + +GS FGNS+AV D N D D+IVGAPFY D +++ GA+Y++ Q + F+ N++DV FGMS+ +GD++ D DFAVG P +TG V I+ G S+ P QVI D K+I FQ FG+S++ D+D N PD+ +G ++V+LRS+ +I L+N + P ++E K CF
Sbjct: 43 SLFGLSVALHEQVVNEKRHMLLVGAPKEKA--ESGLSANETGDVYACPISADSKDCARLNLISSNPED-KPDLKNYVIDGMWLGVSI-VSQSQPGGRVVACGHRYIRNFTSNFRM-------IGRCYVRGNDLQLNLSDYQWQSYDEICDPREAQNSEGMCLLGMSAAVTFS-----EIFFGAPGCFNWQGNIFSKWHNPADEFH--LLKSKLPDSRKGNIYIGYSTIVDQDVL-VKGK---------DTVVTGAPR---DEAKGSVMMAEVLKSGGSGEVKIKVTVTGEQVGSYFGNSVAVVDLNNDGWKDLIVGAPFYFD-----RKMDKGGAVYVYMNQ-NGSFR----NKSDVVLTGPKDSGFGMSVVAIGDVNQDGFQDFAVGAP---YHSTGRVSIWTGSKTGISQEPSQVI-----------------DGKDIPGGGFQTFGYSISRGLDVDRNGYPDIAVGSL-DDRVVLLRSRPVIHLKNTFTVTPMVINLEDCVACIEAKVCF 493
BLAST of Alpha-int-1 vs. Ensembl Xenopus
Match: pycr1 (pyrroline-5-carboxylate reductase family, member 1 [Source:Xenbase;Acc:XB-GENE-1016046]) HSP 1 Score: 169.088 bits (427), Expect = 8.192e-42 Identity = 277/1146 (24.17%), Postives = 478/1146 (41.71%), Query Frame = 3
Query: 315 NSYFGYSISSFI-GQKEAYCLVGAPRDEIDDESTNVNVNTGGVYRISFVNN---DCSKVPMGSEGS------GHVSPGYF---NWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTD---EGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPM-------SMIDKVLLKTSPSDLKNRGYN---LGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTD-HWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSF-QNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHP-FKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEF-------QGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRL-AGFVHVAPENLEG------IYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIEDMMIST------------LPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHRQYKAEIIEDSN 3584
+SYFGYS+ ++ + L+GAP+ V G VY F + C ++P + G P F W G TV + C P + ++ + SE+ +G +I S + S + D +G C + S D + +ALG PGSF +G +F A+ + S+I K+ + + + Y+ LGY + + S + VV P N G V ++++ + + +I + +G + S FG ++AV D N D + DI+VGAP + D + S+ R ++G +Y++ + + +F+ V KG V G+FG +IA+LGD++ D +D AVG P G D G V+IY G S + L T ++ +S FG++L G DID N PDLI+G + + + VV R++ +I ++ + L P + E P+ F +C + + + V+G+ I ++ I+ + ++LD + KR + S + + L + L+ ++ L E + KL P+ VN++ S ++ + L P YK + DCG D C+ D++ LS+ K + E+ I +I N GE AY +L++ IP ++ +GL+ LNC ++ ++ VV C NP V N L+ G R R + + + ++ + N+D SN F+ L VA + G I + N+ K P + + +GP Q + + N+GPS + + L + P + S E +LY ++ P+ Q S T + PED+ + L A RN ++ R + + P K +++C N V+C+ I C + +L V+I++R WA TF K Y S+ + NVS ++K P +I + ++I T +P+W I+L LLG+++L ++ L++WKCGFF R R + ++ +D+
Sbjct: 72 DSYFGYSVDFYLPDSAKTSILIGAPKANTSQPQI---VEGGAVYYCPFPDTLPTGCKQIPFDITNNRNIRLNGTKQPVEFKSNQWFGA----TVRAHKEKVVACAPLYHWRSIKPI--SEKDPVGTCYIAIQNFSAYAEYSPCRSDLADPAGQGVC----QAGFSLDFYKNGDLALGGPGSFYWQGQVFTASIADIIKDYSFKSIIRKISGEKQ-TKMAQSAYDDSYLGYSVAVGEF-----------TDDSVQEVVAGVPRGAQN--FGYVSIINS----TDMTFIQNFTGDQMASYFGYTVAVSDVNNDGLDDILVGAPLFMDREFESNPR--EVGKVYLYMQESALEFR-----DPQVLKGTEVFGRFGSAIAHLGDLNQDGYNDIAVGSPFAGEDRKGRVFIYNGNS-------------NGLNTDTSQILEGAWASQSMPAGFGFTLRGDSDIDKNDYPDLIVGAFGAGKAVVYRARPVITVDAQLLLHPMILNPENKTCQLPNSE-FLVTC-FTVRVCVTVSGQSIPSN--IVVKADLELDWLKQKGAVKRTLFMESHQAHHSFDLIINKQRLSQCLDFLVYLREESEFRDKLT---PISVNLNYSLDESAYLGDQE--------LKPILNRYKKATIQEQAHILVDCGEDNMCIPDLK-----LSARPDKNQLVIGEENHIL-FIINTKNQGEGAYEAELRMIIPPEADYVGIERNMEGLRQLNCEYKMENESRLVV--CDLGNPMVAGTN--------LSVG--LRFVVQRLETVDAITFDLYIKSS--NKDNPNSN-------FVSLQVNITAVAQVEIRGVSHPPQIILPIPNWEPKEKPSEE---KDVGPLVQHIYELHNIGPSAISETQLNVGWPSQ-SRDEFLLYVFHIQTE-----GPLKC----QAGSAINTLNIKPSEPEDTPE---LAAFLRNTSVSHAVSRRDVAVAEALRHIPTPTK--------------LLNCTN-------VKCLMISCKVGHLGGGQRAVVKIRSRLWAPTFLQRKND----YYSL---------IANVSFEVKKMPYDIQPAKLPAAT--ILIKTSVIWATPNISFAIPLWVILLAILLGILVLAILTLVMWKCGFFDRARPPQDDVADDTQ 1072
BLAST of Alpha-int-1 vs. Ensembl Xenopus
Match: pycr1 (pyrroline-5-carboxylate reductase family, member 1 [Source:Xenbase;Acc:XB-GENE-1016046]) HSP 1 Score: 137.502 bits (345), Expect = 3.710e-32 Identity = 203/828 (24.52%), Postives = 356/828 (43.00%), Query Frame = 3
Query: 1167 KILDIIVGAPFYTD-HWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSF-QNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHP-FKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEF-------QGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHVAPENLEGIYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIEDMMIST------------LPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHRQYKAEIIEDSN 3584
++ DI+VGAP + D + S+ R ++G +Y++ + + +F+ V KG V G+FG +IA+LGD++ D +D AVG P G D G V+IY G S + L T ++ +S FG++L G DID N PDLI+G + + + VV R++ +I ++ + L P + E P+ F +C + + + V+G+ I ++ I+ + ++LD + KR + S + + L + L+ ++ L E + KL P+ VN++ S ++ + L P YK + DCG D C+ D++ LS+ K + E+ I +I N GE AY +L++ IP ++ +GL+ LNC ++ ++ VV C NP V N L + Y + K+ S+ ++++V T Q + + G H P+ I + N+ K P + + +GP Q + + N+GPS + + L + P + S E +LY ++ P+ Q S T + PED+ + L A RN ++ R + + P K +++C N V+C+ I C + +L V+I++R WA TF K Y S+ + NVS ++K P +I + ++I T +P+W I+L LLG+++L ++ L++WKCGFF R R + ++ +D+
Sbjct: 280 RLDDILVGAPLFMDREFESNPR--EVGKVYLYMQESALEFR-----DPQVLKGTEVFGRFGSAIAHLGDLNQDGYNDIAVGSPFAGEDRKGRVFIYNGNS-------------NGLNTDTSQILEGAWASQSMPAGFGFTLRGDSDIDKNDYPDLIVGAFGAGKAVVYRARPVITVDAQLLLHPMILNPENKTCQLPNSE-FLVTC-FTVRVCVTVSGQSIPSN--IVVKADLELDWLKQKGAVKRTLFMESHQAHHSFDLIINKQRLSQCLDFLVYLREESEFRDKLT---PISVNLNYSLDESAYLGDQE--------LKPILNRYKKATIQEQAHILVDCGEDNMCIPDLK-----LSARPDKNQLVIGEENHIL-FIINTKNQGEGAYEAELRMIIPPEADYVGIERNMEGLRQLNCEYKMENESRLVV--CDLGNPMVAGTNVSFVLCILF--------YSSNKDNPNSNFVSLQVNITAVAQ--------------VEIRGVSH-PPQ----IILPIPNWEPKEKPSEE---KDVGPLVQHIYELHNIGPSAISETQLNVGWPSQ-SRDEFLLYVFHIQTE-----GPLKC----QAGSAINTLNIKPSEPEDTPE---LAAFLRNTSVSHAVSRRDVAVAEALRHIPTPTK--------------LLNCTN-------VKCLMISCKVGHLGGGQRAVVKIRSRLWAPTFLQRKND----YYSL---------IANVSFEVKKMPYDIQPAKLPAAT--ILIKTSVIWATPNISFAIPLWVILLAILLGILVLAILTLVMWKCGFFDRARPPQDDVADDTQ 985
BLAST of Alpha-int-1 vs. Ensembl Xenopus
Match: pycr1 (pyrroline-5-carboxylate reductase family, member 1 [Source:Xenbase;Acc:XB-GENE-1016046]) HSP 1 Score: 129.798 bits (325), Expect = 1.127e-29 Identity = 205/835 (24.55%), Postives = 355/835 (42.51%), Query Frame = 3
Query: 1167 KILDIIVGAPFYTD-HWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSF-QNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHP-FKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEF-------QGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRL-AGFVHVAPENLEG------IYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIEDMMIST------------LPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHRQYKAEIIEDSN 3584
++ DI+VGAP + D + S+ R ++G +Y++ + + +F+ V KG V G+FG +IA+LGD++ D +D AVG P G D G V+IY G S + L T ++ +S FG++L G DID N PDLI+G + + + VV R++ +I ++ + L P + E P+ F +C + + + V+G+ I ++ ++LD + KR + S + + L + L+ ++ L E + KL P+ VN++ S ++ + L P YK + DCG D C+ D++ LS+ K + E+ I +I N GE AY +L++ IP ++ +GL+ LNC ++ ++ VV C NP V N L+ G R R + + + ++ + N+D SN F+ L VA + G I + N+ K P + + +GP Q + + N+GPS + + L + P + S E +LY ++ P+ Q S T + PED+ + L A RN ++ R + + P K +++C N V+C+ I C + +L V+I++R WA TF K Y S+ + NVS ++K P +I + ++I T +P+W I+L LLG+++L ++ L++WKCGFF R R + ++ +D+
Sbjct: 306 RLDDILVGAPLFMDREFESNPR--EVGKVYLYMQESALEFR-----DPQVLKGTEVFGRFGSAIAHLGDLNQDGYNDIAVGSPFAGEDRKGRVFIYNGNS-------------NGLNTDTSQILEGAWASQSMPAGFGFTLRGDSDIDKNDYPDLIVGAFGAGKAVVYRARPVITVDAQLLLHPMILNPENKTCQLPNSE-FLVTC-FTVRVCVTVSGQSIPSN-----IADLELDWLKQKGAVKRTLFMESHQAHHSFDLIINKQRLSQCLDFLVYLREESEFRDKLT---PISVNLNYSLDESAYLGDQE--------LKPILNRYKKATIQEQAHILVDCGEDNMCIPDLK-----LSARPDKNQLVIGEENHIL-FIINTKNQGEGAYEAELRMIIPPEADYVGIERNMEGLRQLNCEYKMENESRLVV--CDLGNPMVAGTN--------LSVG--LRFVVQRLETVDAITFDLYIKSS--NKDNPNSN-------FVSLQVNITAVAQVEIRGVSHPPQIILPIPNWEPKEKPSEE---KDVGPLVQHIYELHNIGPSAISETQLNVGWPSQ-SRDEFLLYVFHIQTE-----GPLKC----QAGSAINTLNIKPSEPEDTPE---LAAFLRNTSVSHAVSRRDVAVAEALRHIPTPTK--------------LLNCTN-------VKCLMISCKVGHLGGGQRAVVKIRSRLWAPTFLQRKND----YYSL---------IANVSFEVKKMPYDIQPAKLPAAT--ILIKTSVIWATPNISFAIPLWVILLAILLGILVLAILTLVMWKCGFFDRARPPQDDVADDTQ 1023
BLAST of Alpha-int-1 vs. Ensembl Xenopus
Match: pycr1 (pyrroline-5-carboxylate reductase family, member 1 [Source:Xenbase;Acc:XB-GENE-1016046]) HSP 1 Score: 129.413 bits (324), Expect = 1.384e-29 Identity = 205/835 (24.55%), Postives = 355/835 (42.51%), Query Frame = 3
Query: 1167 KILDIIVGAPFYTD-HWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSF-QNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHP-FKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEF-------QGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRL-AGFVHVAPENLEG------IYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIEDMMIST------------LPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHRQYKAEIIEDSN 3584
++ DI+VGAP + D + S+ R ++G +Y++ + + +F+ V KG V G+FG +IA+LGD++ D +D AVG P G D G V+IY G S + L T ++ +S FG++L G DID N PDLI+G + + + VV R++ +I ++ + L P + E P+ F +C + + + V+G+ I ++ ++LD + KR + S + + L + L+ ++ L E + KL P+ VN++ S ++ + L P YK + DCG D C+ D++ LS+ K + E+ I +I N GE AY +L++ IP ++ +GL+ LNC ++ ++ VV C NP V N L+ G R R + + + ++ + N+D SN F+ L VA + G I + N+ K P + + +GP Q + + N+GPS + + L + P + S E +LY ++ P+ Q S T + PED+ + L A RN ++ R + + P K +++C N V+C+ I C + +L V+I++R WA TF K Y S+ + NVS ++K P +I + ++I T +P+W I+L LLG+++L ++ L++WKCGFF R R + ++ +D+
Sbjct: 306 RLDDILVGAPLFMDREFESNPR--EVGKVYLYMQESALEFR-----DPQVLKGTEVFGRFGSAIAHLGDLNQDGYNDIAVGSPFAGEDRKGRVFIYNGNS-------------NGLNTDTSQILEGAWASQSMPAGFGFTLRGDSDIDKNDYPDLIVGAFGAGKAVVYRARPVITVDAQLLLHPMILNPENKTCQLPNSE-FLVTC-FTVRVCVTVSGQSIPSN-----IADLELDWLKQKGAVKRTLFMESHQAHHSFDLIINKQRLSQCLDFLVYLREESEFRDKLT---PISVNLNYSLDESAYLGDQE--------LKPILNRYKKATIQEQAHILVDCGEDNMCIPDLK-----LSARPDKNQLVIGEENHIL-FIINTKNQGEGAYEAELRMIIPPEADYVGIERNMEGLRQLNCEYKMENESRLVV--CDLGNPMVAGTN--------LSVG--LRFVVQRLETVDAITFDLYIKSS--NKDNPNSN-------FVSLQVNITAVAQVEIRGVSHPPQIILPIPNWEPKEKPSEE---KDVGPLVQHIYELHNIGPSAISETQLNVGWPSQ-SRDEFLLYVFHIQTE-----GPLKC----QAGSAINTLNIKPSEPEDTPE---LAAFLRNTSVSHAVSRRDVAVAEALRHIPTPTK--------------LLNCTN-------VKCLMISCKVGHLGGGQRAVVKIRSRLWAPTFLQRKND----YYSL---------IANVSFEVKKMPYDIQPAKLPAAT--ILIKTSVIWATPNISFAIPLWVILLAILLGILVLAILTLVMWKCGFFDRARPPQDDVADDTQ 1023
BLAST of Alpha-int-1 vs. Ensembl Xenopus
Match: pycr1 (pyrroline-5-carboxylate reductase family, member 1 [Source:Xenbase;Acc:XB-GENE-1016046]) HSP 1 Score: 128.257 bits (321), Expect = 3.186e-29 Identity = 193/838 (23.03%), Postives = 341/838 (40.69%), Query Frame = 3
Query: 1167 KILDIIVGAPFYTD-HWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSF-QNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHP-FKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEF-------QGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRL-AGFVHVAPENLEG------IYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIH---------------PISYVFNVSGDLKIYPLNISHNVIFKGIEDMMISTLPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHRQYKAEIIEDSN 3584
++ DI+VGAP + D + S+ R ++G +Y++ + + +F+ V KG V G+FG +IA+LGD++ D +D AVG P G D G V+IY G S + L T ++ +S FG++L G DID N PDLI+G + + + VV R++ +I ++ + L P + E P+ F +C + + + V+G+ I ++ I+ + ++LD + KR + S + + L + L+ ++ L E + KL P+ VN++ S ++ + L P YK + DCG D C+ D++ LS+ K + E+ I +I N GE AY +L++ IP ++ +GL+ LNC ++ ++ VV C NP V N L+ G R R + + + ++ + N+D SN F+ L VA + G I + N+ K P + + +GP Q + + N+GPS + + L + P S E +LY ++ P+ Q S T + PED+ + L A RN ++ R + + P K +++C N V+C+ I C + +L V+I++R WA TF K Y S+ N+ P + + + L+ + + + N +F + +++ + W CGFF R R + ++ +D+
Sbjct: 287 RLDDILVGAPLFMDREFESNPR--EVGKVYLYMQESALEFR-----DPQVLKGTEVFGRFGSAIAHLGDLNQDGYNDIAVGSPFAGEDRKGRVFIYNGNS-------------NGLNTDTSQILEGAWASQSMPAGFGFTLRGDSDIDKNDYPDLIVGAFGAGKAVVYRARPVITVDAQLLLHPMILNPENKTCQLPNSE-FLVTC-FTVRVCVTVSGQSIPSN--IVVKADLELDWLKQKGAVKRTLFMESHQAHHSFDLIINKQRLSQCLDFLVYLREESEFRDKLT---PISVNLNYSLDESAYLGDQE--------LKPILNRYKKATIQEQAHILVDCGEDNMCIPDLK-----LSARPDKNQLVIGEENHIL-FIINTKNQGEGAYEAELRMIIPPEADYVGIERNMEGLRQLNCEYKMENESRLVV--CDLGNPMVAGTN--------LSVG--LRFVVQRLETVDAITFDLYIKSS--NKDNPNSN-------FVSLQVNITAVAQVEIRGVSHPPQIILPIPNWEPKEKPSEE---KDVGPLVQHIYELHNIGPSAISETQLNVGWP-SQSRDEFLLYVFHIQTE-----GPLKC----QAGSAINTLNIKPSEPEDTPE---LAAFLRNTSVSHAVSRRDVAVAEALRHIPTPTK--------------LLNCTN-------VKCLMISCKVGHLGGGQRAVVKIRSRLWAPTFLQRKND----YYSLIANVSFEVKKMPYDIQPAKLPAATILKRNALLETFHFDSNFNFVFWLVFPLLMLAM-----------------------WFCGFFDRARPPQDDVADDTQ 998
BLAST of Alpha-int-1 vs. Ensembl Mouse
Match: Itga2b (integrin alpha 2b [Source:MGI Symbol;Acc:MGI:96601]) HSP 1 Score: 110.153 bits (274), Expect = 9.331e-24 Identity = 127/497 (25.55%), Postives = 223/497 (44.87%), Query Frame = 3
Query: 1005 VTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMS---LKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFY-KRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEF-------QGLKGLNCTLRISEDTINVVALCQFPNPF 2462
V+ +P W G V +LD+ L+ + S FG+S+AV D NGD D++VGAP Y + + ++L ++G +Y+F + K +S + G + G+FG +IA LGD++ D +D AV P G G V I+LG S + + PR + VL +P + FG+SL G DID N PDLI+G Y +S++ V R++ ++ + T + + N K C D + +S ++ V + +K+ + + LD L+ P +R+ L++S+ + +T L+ + + +G R E + P+++++++S P + + +LH G + + DCG D CV +R+ + S L + ++ I N GE AY +L + +P + +G + L CT + ++ + VALC+ NP
Sbjct: 284 VSGAPTWSWT--LGAVEILDSYYQPLHRLH----GEQMASYFGHSVAVTDVNGDGRHDLLVGAPLYMES-RADRKLAEVGRVYLF---LQPKGPQALSTPTLLLTGTQLYGRFGSAIAPLGDLNRDGYNDIAVAAPYGGPSGQGQVLIFLGQS----EGLSPRP-SQVLDSP----------FPTGSGFGFSLRGAVDIDDNGYPDLIVGAYGASKVAVYRAQPVV--------MATVQLMVQDSLNPTLKNCVLDQTKTPVSCFNIQMCVGATGHNIPQKLHLKAELQLD--LQKPRQGRRVLLLASQQASLT--LSLDLGGRDKPICHTTGAFL-RDEADFRDKLSPIVLSLNVSLPPEETGGAPAV------VLH---GETHVQEQTRIIL--DCGEDDLCVPQLRLTATAGDSPLLIG------ADNVLELKIEAANDGEGAYEAELAVHLPPGAHYMRALSNIEGFERLVCTQK--KENESRVALCELGNPM 723
BLAST of Alpha-int-1 vs. Ensembl Mouse
Match: Itga8 (integrin alpha 8 [Source:MGI Symbol;Acc:MGI:109442]) HSP 1 Score: 102.834 bits (255), Expect = 1.679e-21 Identity = 143/566 (25.27%), Postives = 240/566 (42.40%), Query Frame = 3
Query: 273 FLVGLSKLYLHSNVN-SYFGYSISSFI-GQKEAYCLVGAPRDEIDDESTNVNVNTGGVYRISFVNN---DCSKVPMGSEGS------GHVSPGYF---NWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQC--SIYTGSTIRDISFLACSVTD---EGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIF-------LANFGPMSMIDKVLLKTSPSDLKNRGYN---LGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTD-HWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKP----CFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDL 1865
F + + KL ++S SYFGYS+ +I + A LVGAP+ V G VY + + C ++P + + G P F W G TV G + C P + +T K +G C +I S + S S D +G C + S D + + +G PGSF +G + +AN+ ++ K L +D+ Y+ LGY + S + +V P N G V ++++ + + +I + +G + S FG ++ V D N D + DI+VGAP + + + S+ R ++G +Y++ + F+ V G G+FG S+A+LGD++ D +D A+G P G D G V IY G PR L H + + + + S FG+SL G DID N PDL++G + ++ V R++ ++ ++ + L P ++E P+ P CF + + A +AG+ IS + ++ V +D
Sbjct: 38 FNLDVDKLTVYSGPEGSYFGYSLDFYIPDARTASVLVGAPKANTSQPDI---VEGGAVYYCPWPSERSAQCKQIPFDTTNNRKIRVNGTKEPIEFKSNQWFGA----TVRAHKGKVVACAPLYHWRTL----KPNPAKDPVGTCYVAIQNFSAYAEHSPCRNSNADPEGQGYC----QAGFSLDFYKNGDLIVGGPGSFYWQGQVITVSIADIIANYSFKDILRK-LAAEKQTDVAPASYDDSYLGYSVAAGEF-----------TGDSQQELVAGIPRGAQN--FGYVSIINS----TDMTFIQNFTGEQMASYFGYTVVVSDVNNDGMDDILVGAPLFMEREFESNPR--EVGQVYLYLQASALLFQ-----DPQVLTGTETFGRFGSSVAHLGDLNQDGYNDIAIGVPFAGKDQRGKVLIYNGN---------PRGL-HSKPSQVLQGIWGSQTIPS--GFGFSLRGDADIDKNDYPDLLVGAFGKGKVAVYRARPVVTVDAQLLLHPMIINLENKTCQIPEFPTPVACFS------VRVCASIAGQSISNTIALLAEVQLDF 545 HSP 2 Score: 74.7146 bits (182), Expect = 6.674e-13 Identity = 122/491 (24.85%), Postives = 205/491 (41.75%), Query Frame = 3
Query: 2181 DCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEF-------QGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFD---KSNNKGSIDY-FLRLA-GFVHVAPENLEG------IYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYF--LKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISY------VFNVSGDLKIYPLNISHNVIFKGIEDMMISTLPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHRQYKAEIIE 3575
DCG D CV D++ LS+ K I ++ + ++I N GE AY +L + IP+ ++ +GL+ L+C ++ T VV C NP V TG F +G ++E T + +FD +S+NK + D F R+ +A + G I + N+ + P + E +GP + + + N+GPS + L + PF ++ E +LY L+ + NP Q IK A PED+ + L+A RN TI ++V + PV V + I++C N ++C+ I C + L +++++R WA TF K + + + + + Y + S +K + + NV F ++P+W I+L LLGL++L ++ L LWKCGFF R R + E+ +
Sbjct: 639 DCGEDNLCVPDLK-----LSARPDKHQIIIGDENHL-MLIINARNEGEGAYEAELFVIIPEEADYVGIERNNKGLRPLSCEYKMENVTRMVV--CDLGNPMV--------------TGTNF--------SLGLRFAVPRLEKTNMSINFDLQIRSSNKDNPDSNFERVQINITAIAQVEIRGVSHPPQIVLPIHNWEPEKKPHKE---EEVGPLVEHIYELHNIGPSTISDSILDVGWPF-SARDEFLLYIFHLQTLGPLQCQTNPEINPQ-----DIKPAAS-----PEDTPE---LSAFLRN-----------ATIPHLVRKRDVPV-----VQLHRQSPARILNCTN-------IDCLQISCAVGRLGGGESAVLKVRSRLWAHTFLKRKNDHYALASLVSFEVKKMPYKEQPAKLPAGSTAVKTSVIWATPNVSF---------SIPLWVIILAILLGLLVLAILTLALWKCGFFDRARPPQDEMTD 1050
BLAST of Alpha-int-1 vs. Ensembl Mouse
Match: Itga8 (integrin alpha 8 [Source:MGI Symbol;Acc:MGI:109442]) HSP 1 Score: 100.523 bits (249), Expect = 3.713e-21 Identity = 143/566 (25.27%), Postives = 240/566 (42.40%), Query Frame = 3
Query: 273 FLVGLSKLYLHSNVN-SYFGYSISSFI-GQKEAYCLVGAPRDEIDDESTNVNVNTGGVYRISFVNN---DCSKVPMGSEGS------GHVSPGYF---NWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQC--SIYTGSTIRDISFLACSVTD---EGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIF-------LANFGPMSMIDKVLLKTSPSDLKNRGYN---LGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTD-HWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKP----CFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDL 1865
F + + KL ++S SYFGYS+ +I + A LVGAP+ V G VY + + C ++P + + G P F W G TV G + C P + +T K +G C +I S + S S D +G C + S D + + +G PGSF +G + +AN+ ++ K L +D+ Y+ LGY + S + +V P N G V ++++ + + +I + +G + S FG ++ V D N D + DI+VGAP + + + S+ R ++G +Y++ + F+ V G G+FG S+A+LGD++ D +D A+G P G D G V IY G PR L H + + + + S FG+SL G DID N PDL++G + ++ V R++ ++ ++ + L P ++E P+ P CF + + A +AG+ IS + ++ V +D
Sbjct: 38 FNLDVDKLTVYSGPEGSYFGYSLDFYIPDARTASVLVGAPKANTSQPDI---VEGGAVYYCPWPSERSAQCKQIPFDTTNNRKIRVNGTKEPIEFKSNQWFG----ATVRAHKGKVVACAPLYHWRTL----KPNPAKDPVGTCYVAIQNFSAYAEHSPCRNSNADPEGQGYC----QAGFSLDFYKNGDLIVGGPGSFYWQGQVITVSIADIIANYSFKDILRK-LAAEKQTDVAPASYDDSYLGYSVAAGEF-----------TGDSQQELVAGIPRGAQN--FGYVSIINS----TDMTFIQNFTGEQMASYFGYTVVVSDVNNDGMDDILVGAPLFMEREFESNPR--EVGQVYLYLQASALLFQ-----DPQVLTGTETFGRFGSSVAHLGDLNQDGYNDIAIGVPFAGKDQRGKVLIYNG---------NPRGL-HSKPSQVLQGIWGSQTIPS--GFGFSLRGDADIDKNDYPDLLVGAFGKGKVAVYRARPVVTVDAQLLLHPMIINLENKTCQIPEFPTPVACFS------VRVCASIAGQSISNTIALLAEVQLDF 545
BLAST of Alpha-int-1 vs. Ensembl Mouse
Match: Itga5 (integrin alpha 5 (fibronectin receptor alpha) [Source:MGI Symbol;Acc:MGI:96604]) HSP 1 Score: 99.7525 bits (247), Expect = 1.390e-20 Identity = 179/728 (24.59%), Postives = 297/728 (40.80%), Query Frame = 3
Query: 318 SYFGYSISSF-IGQKEAYCLVGAPRDEIDDESTNVNVNTGGVYRISFVNN--DCSKVPMGSEGS-----------GHVSPGY--FNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLAC-----SVTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMS--MIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFS---NEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQ---VSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGG----SKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGD----SCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGE-NAYNVKLKITIPKVLEFQGL 2384
S FG+S+ + G+ LVGAP+ + G VY + + C+ + S+GS G Y W G TV L C P + +T + + Q +G C + T + R + + C S +G C SA+ ++ +V LG PGS+ +G I A +S + L+ L+ R + YD G S + FS E V P K N G V VL+ S I + ++SG + S FG ++A D NGD + D++VGAP + T+ R ++G +YI+ + + T++ Q++ +FG S+ LGD+D D +D A+G P G G V+I+ GG S P QV++P L TP FG +L G D+DGN PDLI+G + + +V R + +I + + P + +N ++ C + SC +S +G+ + S I F V + LD + + +R ++SK + +T+ L E+ L R E + P+ + ++ S P + + + +LH ++ + + CG D CV D+++ + K +Y +K + + N GE AY +L++T P E+ GL
Sbjct: 61 SLFGFSVEFYRPGRDGVSVLVGAPKANTSQPGV---LQGGAVYVCPWGTSPIQCTTIQFDSKGSRILESSLYSAKGEEPVEYKSLQWFG----ATVRAHGSSILACAPLYSWRT-----EKDPQNDPVGTCYLSTENFTRILEYAPCRSDFGSAAGQGYC----QGGFSAEFTKTGRVVLGGPGSYFWQGQILSATQEQISESYYPEYLINPVQGQLQTRQASSVYDDSYL-------GYSVAVGEFSGDDTEDFVAGVP--KGNLTYGYVTVLNG----SDIHSLYNVSGEQMASYFGYAVAATDTNGDGLDDLLVGAPLLMER-TADGRPQEVGRVYIYLQRPAGIDPTPTLTLTGQDEF-------SRFGSSLTPLGDLDQDGYNDVAIGAPFGGEAQQGVVFIFPGGPGGLSTKPSQVLQP--LWAAGRTPDF--------------FGSALRGGRDLDGNGYPDLIVGSFGVDKALVYRGRPIISASASLTIFP-------SMFNPEERSCSLEGNPVSC-INLSFCLNASGKHVPNS--IGFEVELQLDWQKQKGGVRRALFLTSKQATLTQTLLIQNGAREDCREMKIYL---RNESEFRDKLSPIHIALNFSLDPKAPMDSHGLRP----VLH-YQSKSRIEDKAQILLD--CGEDNICVPDLQLDVYG-----EKKHVYLGDKNALN-LTFHAQNLGEGGAYEAELRVTAPLEAEYSGL 709
BLAST of Alpha-int-1 vs. Ensembl Mouse
Match: Itga3 (integrin alpha 3 [Source:MGI Symbol;Acc:MGI:96602]) HSP 1 Score: 98.2117 bits (243), Expect = 4.425e-20 Identity = 128/471 (27.18%), Postives = 202/471 (42.89%), Query Frame = 3
Query: 309 NVNSYFGYSIS---SFIGQKEAYCLVGAPRD-EIDDESTNVNVNTGGVYRISFV--NNDCSKVPMG--SEGSGHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMI-DKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTK----LDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLI 1682
N S FGYS++ Q+ L GAPRD + D+ TN TG VY +DC ++ + S+ H+ WLG +V++ G G L C R+ G+ E Q +G+C + L D+ + + D + LG G F T+ ++ G + + +++ DL Y + + Y + + ++ VVT +P +++ G V +L + L Q+L +G+ FG+++A+ D N D D++VGAP+Y + K V GA+Y+F Q F +Q + R FG+SIA++GDI+ D D AVG P G G VYIY S +L PQ +K + FG+SL+GK D+D N PDL++G S IV+LR++ +I
Sbjct: 47 NPGSLFGYSVALHRQTERQQRYLLLAGAPRDLAVGDDYTN---RTGAVYLCPLTAHKDDCERMDISEKSDPDHHIIEDM--WLGVTVAS--QGPAGRVLVCAHRYTKVLWSGL---EDQRRMVGKCYVRGND-------LQLDPGDDWQTYHNEMCNSNTDYLQTGMCQLGTSGGF-TQNTVYFGAPGAYNWKGNSYMIQRKDWDLSEYSYRGSEEQGNLYIGYTVQVGNAILHPTDIITVVTGAPR---HQHMGAVFLLKQESGGDLQRKQVLK----GTQVGAYFGSAIALADLNNDGWQDLLVGAPYYFER----KEEVG-GAVYVFMNQAGASFP----DQPSLLLHGPSRSAFGISIASIGDINQDGFQDIAVGAPFEG---LGKVYIYHSSS------------GGLLRQPQQIIHGEKLGLPGLATFGYSLSGKMDVDENLYPDLLVGSL-SDHIVLLRARPVI 467
BLAST of Alpha-int-1 vs. UniProt/SwissProt
Match: sp|P26009|ITA8_CHICK (Integrin alpha-8 OS=Gallus gallus OX=9031 GN=ITGA8 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 9.280e-36 Identity = 271/1126 (24.07%), Postives = 463/1126 (41.12%), Query Frame = 3
Query: 318 SYFGYSISSFIGQKEAY-CLVGAPRDEIDDESTNVNVNTGGVYRISFVNNDCSKVPMGSEGS------GHVSPGYF---NWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTD---EGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPM------SMIDKVLLKTSPSDLKNRGYN---LGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLG---GSKV-PVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSK-----NLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFS-TLNSTVEIFSG--LVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHP-FKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQG-------LKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHV-APENLEGIYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQD----SSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIEDMMISTLPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHR 3551
SYFGYS+ +I LVGAPR V G VY + C ++P + + G P F W G TV + C P + +T + E+ +G +I S + S S D +G C + S D + + +G PGSF +G + A+ + I + L + + Y+ +GY + S E +V P N G V ++++ S + +I + +G + S FG ++AV D N D + DI+VGAP + + SK ++G +Y++ + + F+ + G V G+FG +I +LGD++ D +D AVG P G D G V IY G G K P QV LN + + M S FG++L G D+D N PDLI+G + + + VV R++ N + + NP+ + P +K+ + P P F +C +++ A S S++I+ + + LD+ + KR S ++ FS + +++ LV R E + P+ +N++ S + + ++ P Y+ S + DCG D C+ D+ LS+ K + E+ + ++I N GE AY +L I IP ++ G L+ L+C ++ +T VV C NP V N +TG F S ++ +N S ++++ + + ++N ++ + A V V + I + N+ K P + E +GP + + + N+GPS + L + P S+GE L ++ I + +PI+I Q+ N +P+D+ P + + +Y +R V E P + S +I++C N V+CI I C++ L ++I++R WAETF K + +++ + + Y L + I +VI+ + +P+W I+L +LGL++L ++ L LWKCGFF R R
Sbjct: 40 SYFGYSVDFYIPDPSTVSVLVGAPRANTTQPDI---VEGGAVYHCGWPAARCRQIPFDNTNNRKIKVNGTREPIEFKTNQWFGA----TVKAHKEKVVACAPLYHWRTLK--DSPEKDPVGTCYVAIQNFSAYAEYSPCRNSNADPEGQGFC----QAGFSLDFYKNGDLIVGGPGSFYWQGQVITASIADIITNYSFKDILRKLAHEKQTGVAPPTYDDNYMGYSVAAGEF-----------TGDSEEELVAGVPRGAQN--FGYVSIINS----SDLTFIQNFTGEQMASYFGYTVAVSDVNNDGLDDILVGAPLFMEREFESKPK-EVGQVYLYLQESAFLFR-----DPQILTGTEVFGRFGSAITHLGDLNQDGYNDIAVGAPFAGEDRRGKVLIYNGYSNGLKTDPSQV-----LNGAWAS---------QSMPS--GFGFTLRGDSDVDKNDYPDLIVGAFGAGKAVVYRARPVVTVNALLILNPMIVNPDNKTCQ-----PPGSPLFV-AC---FTVRVCAAFEGQSISDEIVLKGELQLDSLKQKGAVKRTLFFDYHQS------HHYFSIVMERQKKLYCQDFLVYLRDETEFRDKLSPININLNYSLDESHFKDS--------LLVKPILNYYQRPSVTEQAYILVDCGEDNLCIPDLH-----LSAVPDKDQLIIGEENCV-MLIINPRNDGEGAYEAELHIKIPPEADYTGVERNNKALRVLSCDYKMENETRMVV--CDLGNPMVAGAN--------FSTGIRF-SVQHFENSDFSINFELQIKSS---NKINSTSNLVNLHINITAAAQVQVRGVSHPPQIILPLHNWEPKDEPTKE---EEIGPLVEHIYELHNIGPSAINNTVLHVGWP--VSSGEEFLLYILHIQTHGPLHCQTSSPINIMQI------------NFAIPQDT--PELAAFLYNSTISHYIRRREVAVAE--------PYRRNS---------AKILNCTN-------VKCILISCNVGQLERGKSAALKIRSRLWAETFLQRKNDPYTLSSNVSFKVKNMPYKVQ-PAKLPEGSIAIRTSVIWSTPNVSFV--IPLWVIILAIMLGLLVLAVLTLALWKCGFFDRAR 1024
BLAST of Alpha-int-1 vs. UniProt/SwissProt
Match: sp|P26008|ITAV_CHICK (Integrin alpha-V OS=Gallus gallus OX=9031 GN=ITGAV PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.669e-31 Identity = 239/1033 (23.14%), Postives = 408/1033 (39.50%), Query Frame = 3
Query: 318 SYFGYSISSFIGQKEA-YCLVGAPRDEIDDESTNVNVNTGGVYRISF-VNNDCSKVPMGSEGSGHVSPG------YFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTD-----EGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPK------GRSPFINSFSN---EVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQ-NFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLE-----NPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNP----DCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQG-------LKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHV-APENLEGIYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYR-NKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFF 3290
SYFG+++ F + + LVGAP+ + +NV V G V + ++ N +C + S G+ +P W G SV + N L C P + +T +++Q+ +G C ++ GS + + + C T +G C S D ++ +V LG PGSF +G + + ++L K ++ Y+ YD +LA G S + FS E V+ P ++ G+V + + K ++S + + +G + + FG S+A D NGD D+ +GAP + D + K L ++G + I + S F+ N ++F +FG +IA LGD+D D +D AV P G D G VYIY G R LN V ++ + R+ +FG+SL G D+D N PDLI+G + V+ R++ +I + NP L P +K+ CF + LKA G+ + F+V + LD + +R + SK +K + + + E+ + L + + KL P+ + + ++ LHP P ++ R DCG D C + V + +Y D +++ N GE AY +L + +P +F G L L+C + T VV C NP + L +++ + +I SS L FD + L ++ V + + + I++ N+ K +P + +GP Q + + N GPS K+ +T+ P+K N Y L I Q D G P++ + ++ +K ++ D N R +N+R ++R + IE V+T G G+ +C+ I C + +L + +K+R W +TF
Sbjct: 36 SYFGFAVDFFAPDASSMFLLVGAPK--ANTSQSNV-VEGGQVLQCNWNSNRNCQPIIFDSTGNRDFAPDDPLEFKSHQWFGASVRS----KNDKILACAPLYHWRT-----ETKQEREPVGTCYLFDGS--KSVEYAPCRSTTIDADGQGFC----QGGFSIDFTKGDRVLLGGPGSFYWQGQLI------SDRVAEILAK-----YDSKVYSTKYDDQLATRPASAAFDDSYLGYSVAVGDFSGDGIEDFVSGVP--RAARTLGMVSIYNGK-NMSSMY---NFTGEQMAAYFGYSVATTDINGDDYTDLFIGAPLFMDRGSDGK-LQEVGQVSICLQRASGGFQIAKLNGFEIF------ARFGSAIAPLGDLDQDGFNDIAVAAPYGGEDKRGLVYIYNG---------RATGLNAV----PSRILEGQWAARTMPPSFGYSLKGATDVDKNGYPDLIVGAFGVDTAVLYRARPVIRVNAALEVNPTILNPENKACSLADVK---VSCF----KVKFCLKADGKGK---LPNSLNFQVELLLDKLKQKGAIRRALFLHSKQPSHSKNMTITKGGKMNCEELDAFLRDESEFRDKLT---PITIFMEYRLDYKTAVDATG--------LHPILNQFI---PANMSRQAHILLDCGEDNICKPKLEVSVRSDQKKIYIGDD------NPLTLIVTAENQGEGAYEAELFVIVPPQADFIGVVRNNEALARLSCAFKTENQTRMVV--CDLGNPMKAGTKLLAGLRFSVHQQSEMDTSVKFDLQIRSSNL------------FDNLSPVAFYQVDLAISAAVEIRGVSSPDHIFLPIANWQPKENPETE---DDIGPLVQHIYELRNNGPSAFSKVMMTLQWPYKYKN-----YTLLYIVQYDIDG-PMNCTSDMEINPLK------IKISAPKEDEKN-ETFSREDNRNHRISRRDLTAIEGDVQTL----------------------------GCGNADCLKIVCQVGHLERGKSAILYLKSRLWTQTFM 925
BLAST of Alpha-int-1 vs. UniProt/SwissProt
Match: sp|Q9QUM0|ITA2B_MOUSE (Integrin alpha-IIb OS=Mus musculus OX=10090 GN=Itga2b PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 6.527e-23 Identity = 127/497 (25.55%), Postives = 223/497 (44.87%), Query Frame = 3
Query: 1005 VTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMS---LKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFY-KRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEF-------QGLKGLNCTLRISEDTINVVALCQFPNPF 2462
V+ +P W G V +LD+ L+ + S FG+S+AV D NGD D++VGAP Y + + ++L ++G +Y+F + K +S + G + G+FG +IA LGD++ D +D AV P G G V I+LG S + + PR + VL +P + FG+SL G DID N PDLI+G Y +S++ V R++ ++ + T + + N K C D + +S ++ V + +K+ + + LD L+ P +R+ L++S+ + +T L+ + + +G R E + P+++++++S P + + +LH G + + DCG D CV +R+ + S L + ++ I N GE AY +L + +P + +G + L CT + ++ + VALC+ NP
Sbjct: 284 VSGAPTWSWT--LGAVEILDSYYQPLHRLH----GEQMASYFGHSVAVTDVNGDGRHDLLVGAPLYMES-RADRKLAEVGRVYLF---LQPKGPQALSTPTLLLTGTQLYGRFGSAIAPLGDLNRDGYNDIAVAAPYGGPSGQGQVLIFLGQS----EGLSPRP-SQVLDSP----------FPTGSGFGFSLRGAVDIDDNGYPDLIVGAYGASKVAVYRAQPVV--------MATVQLMVQDSLNPTLKNCVLDQTKTPVSCFNIQMCVGATGHNIPQKLHLKAELQLD--LQKPRQGRRVLLLASQQASLT--LSLDLGGRDKPICHTTGAFL-RDEADFRDKLSPIVLSLNVSLPPEETGGAPAV------VLH---GETHVQEQTRIIL--DCGEDDLCVPQLRLTATAGDSPLLIG------ADNVLELKIEAANDGEGAYEAELAVHLPPGAHYMRALSNIEGFERLVCTQK--KENESRVALCELGNPM 723
BLAST of Alpha-int-1 vs. UniProt/SwissProt
Match: sp|P06756|ITAV_HUMAN (Integrin alpha-V OS=Homo sapiens OX=9606 GN=ITGAV PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 9.292e-23 Identity = 175/753 (23.24%), Postives = 314/753 (41.70%), Query Frame = 3
Query: 318 SYFGYSISSFI--GQKEAYCLVGAPRDEIDDESTNVNVNTGGVYRISFVNND-CSKVPMGSEGSGHVS---PGYF---NWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTD-----EGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPK--GRSPFINSFSNEVV---VTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQ-NFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPC------FGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNP----DCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEF-------QGLKGLNCTLRISEDTINVVALCQFPNPF 2462
SYFG+++ F+ + LVGAP+ V G V + + + C + + G+ + P F W G SV + + L C P + +T + +Q+ +G C + G+ + + + C D +G C S D ++ +V LG PGSF +G + + +++ K P ++ + YN + A+ + G S + F+ + + V+ P ++ G+V + D K ++S + + +G + + FG S+A D NGD D+ +GAP + D + K L ++G + + + S F+ T N +VF +FG +IA LGD+D D +D A+ P G D G VYI+ G R LN V ++ + RS +FG+S+ G DID N PDLI+G + + ++ R++ +I + + + P+ N+ +K C SC + + K G+ + K+ F+V + LD + +R + S+S +K + S L E+ + L + + KL P+ + + +++ ++ +L+ F +P ++ R DCG D C + V + +Y D +++ N GE AY +L ++IP +F + L L+C + T VV C NP
Sbjct: 47 SYFGFAVDFFVPSASSRMFLLVGAPKANTTQPGI---VEGGQVLKCDWSSTRRCQPIEFDATGNRDYAKDDPLEFKSHQWFGASVRSKQDKI----LACAPLYHWRT-----EMKQEREPVGTCFLQDGT--KTVEYAPCRSQDIDADGQGFC----QGGFSIDFTKADRVLLGGPGSFYWQGQLI------SDQVAEIVSKYDP-NVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVP--RAARTLGMVYIYDGK-NMSSLY---NFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGK-LQEVGQVSVSLQRASGDFQTTKLNGFEVF------ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNG---------RSTGLNAV----PSQILEGQWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSI-------LNQDNKTCSLPGTALKVSC-FNVRFCLKADGKGV-LPRKLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIAYLRDESEFRDKLT---PITIFMEYRLDYRTAADTTGLQP----ILNQF-------TPANISRQAHILLDCGEDNVCKPKLEVSVDSDQKKIYIGDD------NPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGVVRNNEALARLSCAFKTENQTRQVV--CDLGNPM 717
BLAST of Alpha-int-1 vs. UniProt/SwissProt
Match: sp|Q06274|ITA5_XENLA (Integrin alpha-5 OS=Xenopus laevis OX=8355 GN=itga5 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.091e-22 Identity = 178/757 (23.51%), Postives = 298/757 (39.37%), Query Frame = 3
Query: 318 SYFGYSISSFIGQKEAYC-LVGAPRDEIDDESTNVNVNTGGVYRISFVNN--DCSKVPMGSEGS-----------GHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVT-DEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPM--SMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVV---VTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGG----SKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGD------SCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGL-VEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYK---YFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQG-------LKGLNCTLRISEDTINVVALCQFPNPF 2462
S+FG+S+ ++ ++ LVGAP+ G V+ + N +C+++ S G H+ W G TV L C PR+ S+ K E++ +G C + + + + C + A SA+ ++ +V LG PGS+ +G + A + + + + ++ R YD G S + FS + V P K N G V +L+ DL + + SG + S FG S++ D N D + D+++GAP + D T R+ ++G +Y++ + + S + + G+ G+FG SIA+LGD+D D +D A+G P G G+V+I+ G P QV++ + Q S+ FG S G D+DGN PDLI+G + +V R + P+ S SI +N +K C + SC +S +G+ + S I +V + LD + KR + ++ +T+ ++ LN E + + R E + P+ V ++ S P + + L P YK Y + DCG D CV D+++ +S S+Y D + + N G AY +L +T+P E+ G L L C + T V+ C NP
Sbjct: 49 SFFGFSVDFYLPDAQSISILVGAPKANTSQPGV---FEGGAVFYCPWQRNGTNCTEISFDSHGDRQRELFDTPQPKHMESKSEQWFG----ATVRAHGKTILACAPRY----SWRTEKEEKRSDPVGTCYLSVNNFTTFVEYSPCRTDFSDAAGQGYCQGGFSAEFTKSGRVLLGGPGSYFWQGQVITATQDEIQEAYYPEYFVLEYKKQMQTRQAASSYDDSYF-------GYSVAVGEFSEDATEDFVVGVP--KGNITYGYVTILNGT-DLRSLY---NFSGEQMASYFGYSVSATDLNSDGLDDLLIGAPLFMDR-THDGRVQEVGRVYVYL-----QGDHMESTPHLILTGMEEYGRFGSSIASLGDLDQDGFNDIAIGAPFGGEAQRGAVFIFNGQPGGVDSKPSQVLQ----GQWGSSQQPSF------------FGLSTRGGHDLDGNGYPDLIVGAFGVDTTLVYRGR-------PIIHASASLSISPNMFNPEEKTCTLEGNASAVSC-INLSFCLNASGKHVPNS--IGIKVELQLDQTKQKGAVKRALFLKTRQPQLTQTIHL----LNGGKEECRAMKIYLREESEFRDKLSPIYVGLNFSLDPLAPADAHG--------LMPIFNYKTKNYIEQKAQI--QLDCGEDNICVPDLKLNVSGDRKSVYLGDENF------LTLFFNAQNLGGGAYEAELYVTLPPEAEYSGIVRNNEHLLILPCAYEMENQTRLVI--CDLGNPM 727
BLAST of Alpha-int-1 vs. TrEMBL
Match: A0A1P8CUY4 (Alpha-int-1 (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 1442.56 bits (3733), Expect = 0.000e+0 Identity = 740/740 (100.00%), Postives = 740/740 (100.00%), Query Frame = 3
Query: 852 MSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHVAPENLEGIYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVET 3071
MSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLGDIDGDDIDDFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNISISYQPTSSSSNDNIEISNFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHVAPENLEGIYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVET
Sbjct: 1 MSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLGDIDGDDIDDFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNISISYQPTSSSSNDNIEISNFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHVAPENLEGIYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVET 740
BLAST of Alpha-int-1 vs. TrEMBL
Match: G7YUI6 (Integrin alpha-5 OS=Clonorchis sinensis OX=79923 GN=CLF_111216 PE=3 SV=1) HSP 1 Score: 642.499 bits (1656), Expect = 0.000e+0 Identity = 412/1284 (32.09%), Postives = 652/1284 (50.78%), Query Frame = 3
Query: 261 DNDIFLVGLSKLYLHSNVNSYFGYSISSFIGQKEAYCLVGAPRDEID----------DESTNVNVNTGGVYRIS--FVNNDCSKVPMGSEGS-----GHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFL-------SKTSYGVNKSEQQ------LLGIGQCSIYTGSTIRDISFLACSVTDEGACLXXXXXXXXXXXX-EKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLW-----YGPKGRSPFINSFSNEVV----------VTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDH----------WTS--------------------------------SKRLVDIGAIYIFYGQVSDKFKYTVSNQND-----------VFKGV-NVRGKFGMSIANLXXXXXXXXXXFAVGCPNC----GNDATGSVYIYLGG-----SKVPVQVIRPRNLNHVLVTPQCSYMDDKEI-MRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGR----KISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSK--------------SSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLS-SSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSY-----------------------------------KNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHVAPENLEGIYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRIS-QQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNK---------RSVETIEN-----------VVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIEDMMISTLPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHRQY 3557
D+ +F + Y H+ SYFGYS++S++GQ +++CLVGAPR D +++ + TG VYRI F CS VP+ + G +PG +WLGG+V+ N NG+QLGCDPR++ S G+ ++ + LLG GQC++YTG++++ S AC +EGACL+GFS+ V + + V LGMPGS+LTEGN+FL ++ +++ + LK+SP DLK++G+NLGY + L L Y R + N E V + SS W N+YRG+V++LD +DL I Y+ D GH+GS FG SLA D +G+ I DIIVG+P++T+ W+ + L DIG +Y+F+G S+ T+ N + + G +V G+FG S+ ++GD+DGD +D A+ CP C G G+V+IYLG P QVI P L C D + R F++FGWSL+ D+D N PDLI+GD+ S Q+V LR++N IW + P W LP ++++ W+ PD+ G CR+ L +V G+ + +E+ V +D+D + + YKRL +S S++ + + + + S +EP+ +++ IW+P+++N +I+ + + N WMLHPF G ++F S F NP CG+D C +D++V + D+S +L K +Y++E+ R + +G+GN GENAY +L++TIP F + L+C ++ D LC+ +P + LNT GAFR ++++ + +T+ E C N+D D +NK +I Y L+LA + ++ L+ +D+RNF+ ++ +QRV+PETLGP + + +SN GPSP+E + + +S+P +TS GE+++Y L R+ + G P+ + P+VIS +G G C PE +++PL LNA+ R +Q N R V +IE+ +E S+ + SI+ ++ R QEI+ C G+ C I C I L+ +++ I+ WA+TFF +K+SD I + + +++ +V G+ I PL IS N +F+GI+ + +P+WPI+LG +LG LL IIL +W+CGFF+R R Y
Sbjct: 36 DDLLFPPNAVQRYAHTKPGSYFGYSVASYVGQSQSFCLVGAPRASQDRPGDLLADFGSSTSDPSSATGLVYRIDLDFKLPYCSVVPIATTDEARREHGTPTPGISSWLGGTVAAASNAQNGIQLGCDPRYIYAPEPINQTVSDGIRPTDSRPLHSRNLLGTGQCALYTGASMQYTSVDACIGQEEGACLAGFSADVETGTAFGEAHVVLGMPGSYLTEGNVFLGHYRGRELVNAMRLKSSPQDLKHKGFNLGYAVLLDELVRKSVSYPTPAR--YQNGLDIEPVGQDRRVRLSLLVSSSMWLDNDYRGIVMILDQAMDLGGITYLKDQWGHIGSFFGYSLATADLDGNGIADIIVGSPYFTERKDDKDQDDSDWSVKSAKSNRPRDTLNAPREEEQVDSDPNIVDRLWGRLLPDIGRVYVFHGFPSNLTSNTLVNSDSLRPDYLSRPPVILDGPKSVGGRFGHSVVSMGDVDGDGTEDLAISCPYCSDPEGTREKGAVFIYLGKKDSMLEDEPFQVIWPAELPRAAPITTCGDFDTHDSGHRMFKSFGWSLSAGIDLDANHAPDLIVGDFDSDQVVFLRARNTIWFDAPEWDLPLARTLPWSG---PDETECGTQCRFRGQLSVRVHGKPSLLQRHQTERFKLHVAVDMDASIVNLVYKRLAGISDTGNAGGSGFMSMGMLESVVPVTITRDTLMNTNRMVLLSLTLEPQSARVRPYIWKPILLNATITPAFDAMPHVPGPKQVNSWMLHPFLGERHFVSRPLQFANPACGADNICYADLQVRMMDMSVGALEKLVVYFRERVTQRNLTVGVGNLGENAYAAQLRMTIPHQFSFVIPEELHCQSKVLPDIQATQILCELGDPLGYTGRNLRPFLFQLNTAGAFRELDEPVNDQPTTSPNASESNLEPSLKPQWSPSNDSLKRSKRATVSKDSVTITAEVLCGNEDQDLRDNKATITYKLQLAAKIELSSSALDRTTIDTRNFTVQLYEMQRVHPETLGPEIKHIYLVSNDGPSPIENLWVNVSLPIQTSEGEHLVYILDRVRYHAEDGGPPLIAATAPEVISAEGDVRGMCITPEWALNPLRLNAVHRGRRQQTFNARLEDEDNLIRRVRSIEDDDYKPAHRKQSELENSSSVRATRSIISGVRKRQQEIIKCEQETVNLGTPLCATIRCRIDQLSRGDAVRIVIRGHVWADTFFRHKISDLAIVSEARSEMASVAFGISVHGNRTIEPLAISQNFVFQGIKVPLFRQIPLWPIILGCILGAALLAFIILGMWRCGFFRRRRWY 1314
BLAST of Alpha-int-1 vs. TrEMBL
Match: A0A4S2LXG9 (Integrin_alpha2 domain-containing protein OS=Opisthorchis felineus OX=147828 GN=CRM22_004334 PE=3 SV=1) HSP 1 Score: 640.188 bits (1650), Expect = 0.000e+0 Identity = 412/1281 (32.16%), Postives = 653/1281 (50.98%), Query Frame = 3
Query: 261 DNDIFLVGLSKLYLHSNVNSYFGYSISSFIGQKEAYCLVGAPRDEIDDES----------TNVNVNTGGVYRIS--FVNNDCSKVPMGSEGS-----GHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFL-------SKTSYGVNKSE------QQLLGIGQCSIYTGSTIRDISFLACSVTDEGACLXXXXXXXXXXXX-EKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDI---KLARLWYGPKGRSPFINSFSNEVV----------VTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDH----------WTS-------------------------------SKRLVDIGAIYIFYGQVSDKFKYTVSNQND------------VFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNC----GNDATGSVYIYLGG-----SKVPVQVIRPRNLNHVLVTPQCSYMDDKEI-MRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGR----KISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSK--------------SSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLS-SSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSY-----------------------------------KNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHVAPENLEGIYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRIS-QQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNK---------RSVETIEN-----------VVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIEDMMISTLPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHRQY 3557
D+ +F + Y H+ SYFGYS++S++GQ +++CLVGAPR D ++ + TG VYRI F CS VP+ + G +PG +WLGG+V+ N NG+QLGCDPR++ S G+ ++ Q LLG GQC++YTG++++ S AC +EGACL+GFS+ V + + V LGMPGS+LTEGN+FL ++ +++ + LK+SP DLK++G+NLGY + +L R + N E V + SS W N+YRG+V++LD +DL I Y+ D GH+GS FG SLA D +G+ I DIIVG+P++T+ W+ + L DIG +Y+F+G S+ T+ N + V +V G+FG S+ ++GD+DGD +D A+ CP C G G+V+IYLG P QVI P L C D + R F++FGWSL+ D+DGN PDLI+GD+ S Q+V LR++N IW ++P W LP ++++ W+ PD+ G C++ + L +V G+ + + + V +D+D + + YKRL +S+ S++ + T + + + S +EP+ +++ IW+P+++N +I+ + S + N WMLHPF G ++F S F NP CG+D C +D++V + D+S +L K +Y++E+ R + +G+GN GENAY +L+ITIP F + L+C + D LC+ +P + LNT GAFR ++++ + +T+ E C N+D D +NK +I Y L+LA + ++ +L+ +D+RNF+ ++ +QRV+PETLGP + + +SN GPSP+E + + +S+P +TS GE+++Y L R+ + G P+ + P+VIS +G G C P+ +++PL LNA+ R Q N R V +IE+ +E S+ + SI+ ++ R QEI+ C G+ C I C I L+ +++ I+ WA+TFF +K+SD I + + +++ +V G+ I PL IS N +F+GI+ + +P+WPI+LG +LG LL IIL +W+CGFF+R R Y
Sbjct: 36 DDLLFPPNAVQRYAHTKPGSYFGYSVASYVGQSQSFCLVGAPRASQDRPGDLLADFGSSSSDPSSATGLVYRIDLDFKLPYCSVVPIATTDEARREHGTPTPGISSWLGGTVAAASNAQNGIQLGCDPRYIYAPEPINQTASDGIRPTDSRPLHSQNLLGTGQCALYTGASMQYTSVDACIGQEEGACLAGFSADVETGTAFGEAHVVLGMPGSYLTEGNVFLGHYRGRELVNAMRLKSSPQDLKHKGFNLGYAVLLDELVRKSVSHPTSAQHQNGLDVEPVGQDRRARMSLLVSSSMWLDNDYRGIVMILDQAMDLGGITYLNDQWGHIGSFFGYSLATADLDGNGIADIIVGSPYFTERKDDKDQDDSDWSVKSAKSNRPRDTLNAPREEEVDSDPNIVDRLWGRLLPDIGRVYVFHGFPSNLTSNTLVNSDSLRPDYLSRPPVIVDGPKSVGGRFGHSVVSMGDVDGDGTEDLAISCPYCSDPEGTREKGAVFIYLGKKDSILEDEPFQVIWPAELPRAAPITTCGDFDTHDSGHRIFKSFGWSLSAGIDLDGNHAPDLIVGDFDSDQVVFLRARNTIWFDSPEWDLPLARTLPWSG---PDETECGTQCQFRVQLSVRVHGKPSLLQRHQTAQFKLHVAVDMDASIVNLVYKRLAGISNVENAGGSGFMSMGMLESVVPVTITRDTLTDTNRMVLLSLTLEPQSARVRPYIWKPILLNATITPASNAMSHVPGPKEVNSWMLHPFLGERHFVSRPLQFANPACGADNICYADLQVRMMDMSVGALEKLVVYFRERVTQRNLTVGVGNLGENAYAAQLRITIPHQFSFVIPEELHCQSTVFPDIQATQILCELGDPLGYTGRNLRPFVFQLNTAGAFRELDEPVNDQPATSSNASESNLEPSLKPQWSSSNDRLRRSKRATVSKDSVTITAEVICGNEDQDLRDNKATITYKLQLAAKIELSSSSLDRTTIDTRNFTVQLYEMQRVHPETLGPEIKHIYLVSNDGPSPIENLWVNVSLPIQTSEGEHLVYILDRVRYHAEDGGPPLIAATAPEVISAEGDVRGMCTTPDWALNPLRLNAVHRGRGQQIFNAQPEDEDNLIRRVRSIEDDNYKPPHPKQSELENSSSVRATRSIISGVRKRQQEIIKCEQETVNLGTPLCATIRCRIDQLSRGDAVRIVIRGHVWADTFFRHKISDLAIVSEARSEMASVAFGISVHGNRTIEPLAISQNFVFQGIKVPLFRQIPLWPIILGCILGAALLAFIILGMWRCGFFRRRRWY 1313
BLAST of Alpha-int-1 vs. TrEMBL
Match: A0A4E0RJF2 (Integrin alpha-5 OS=Fasciola hepatica OX=6192 GN=D915_001333 PE=3 SV=1) HSP 1 Score: 614.764 bits (1584), Expect = 0.000e+0 Identity = 419/1289 (32.51%), Postives = 652/1289 (50.58%), Query Frame = 3
Query: 270 IFLVGLSKLYLHSNVNSYFGYSISSFIGQKEAYCLVGAPRDEID--------DESTNVNVNTGGVYRISFVNN--DCSKVPMGSEGS-----GHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFL---------SKTSYGV-----------NKSEQQLLGIGQCSIYTGSTIRDISFLACSVTDEGACLXXXXXXXXXXXX-EKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGP-KGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTD-------------------HWTSSKR------------------------------LVDIGAIYIFYGQVSDKFKYTVSNQND-------VFKGVNVR-GKFGMSIANLXXXXXXXXXXFAVGCPNCGN----DATGSVYIYLGG-----SKVPVQVIRPRNLNHVLVTPQCSYMDDKEI-MRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYI--DLDTKLEHPFYKRL---QLVSSKSSIITKYLNYSFSTLNSTVEIFSGLV--------------EPRFEQIKLNIWQPLIVN--IXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTD-IYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSY-------------------------------KNRKNK------IGS-------SILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHVAPENLEGIYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQ-DSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQN-YRNKRSVE-TIENVV-------ETKS-------NPVKSA-SIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIEDMMISTLPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHRQYKAEII 3572
IF K Y H+ SYFGYS+++++GQ +++CLVGAPR ++D + N +TG VYR+ CS VP+ + G +PG WLGGSV+ N NG+QLGCDPR++ +++G ++S + +LG GQC++YTG++++ AC +EGACLSGFS+ V A + VALGMPGS+LTEGN+FL ++ +++ LK+SP D+K+ G+NLGY +KLA L P + + ++ S ++TSS W N+YRG+V++LD +DL I Y+ D GH+GS FG SL D NGD I DI+VGAP++TD H T + + L D+G +Y+FYG+ ++ + + D + G + G+FG +I +L D+DGD +D AV CP C + + G+V +YLG + P Q+I +L C +E R+FQ+FGWSL+G D+DGN PDL++GD+ S Q+V++R++N +W ++P W LP ++++ W+ P + +C + + L V GR +FRV + DLD +E KRL L S N + L++ V I + +P +++ +W+P+ +N I+ P + + IE W+LHPF G +YF S F NP CG D C+++++V ++D S + IY++E+ R + + +GN GENAY LK+ IP + K L C I + +C +P +K+ LNT GAF+ K+R ++ +GS +T+ EG N D D NN SI Y L+LA + ++ L+ +DSRNF++++ +QRV+PET+GP + + +SN GPSP+E + + I++P KT N E+++YFL RI + G P +++ P+VIS +G G C P+ +++PL LNA+ R+ + RN RS E T E+++ ET++ NP +S SI+P ++ R QEI+ C G C I+C I NL+ +++ ++ WA+TFF YK+ D I + + ++ V G+ I PL IS N +F GI+ +P+WPI+LG +LG LL II LW+CGFF+R Y A+ +
Sbjct: 56 IFPFDAVKRYAHTESGSYFGYSVAAYVGQAQSFCLVGAPRAKLDGFNDLPLSTFNPNTEDSTGLVYRLDLDTRLPYCSLVPIATTDEARKEYGTPTPGISKWLGGSVAAASNSLNGIQLGCDPRYIYAPDLINQTGSSTWGTGHWNGGPTGTSSRSGRTMLGTGQCALYTGASMQYTPVDACLTQEEGACLSGFSADVEAGTEFGEALVALGMPGSYLTEGNVFLGHYRGRELLNAFRLKSSPEDVKHMGFNLGYSVKLAHLIRRPFRDENGRVDGTSGASLLTSSSMWFDNDYRGIVMILDQAMDLGGITYLKDKWGHIGSFFGYSLTTADLNGDGIADIVVGAPYFTDRKETADQSQTDIYVQGASSHNTETPKSELSQKTRSGTDDAAEEKNDKERDTDWGRLLPDVGRVYVFYGRPANVTGMGANRRPDYTGHEPVILNGPRLAGGRFGHAITSLSDVDGDGTEDIAVSCPYCTDPRNREEKGAVLVYLGRKTGRITDDPSQIIWAGDLPKEDPVTTCGDFGLEESGPRTFQSFGWSLSGGTDLDGNRAPDLVVGDFESDQVVIIRARNTLWFDDPQWDLPVARTLPWSG---PGQTLCDTACHFEVRLTVAVHGRAEVLRNPGVFRVRVRSDLDAGMEESAMKRLIGFDLAEPAESSPPNMSNTGY--LDTVVTIRPNKLIDSSNRLTLLTLRLQPVLDRVMHLLWKPIRINASINPVDNPATKVRDSVIEPIPSWVLHPFLGERYFVSRQLRFANPACGPDNVCMAELQVRLTDQSHGPTENQVIYFRERISQRNLTVHVGNLGENAYASWLKLLIPHQFSYIIPKNLACETNIRMEQKATEIVCSLGDPLQYTGSKLIPFVFQLNTAGAFKPLDLPMSDAPQDGVRALNETDNPTWSEKSTARSKSRHSRQTGLDPVGSVANSFVNDTVTIYAEGFSGNDDLDPWNNNASITYKLQLAAKIDLSSSALDRTIIDSRNFTAQLYEMQRVHPETIGPEIKHIYLVSNNGPSPIENLWVNITMPVKTENDEHLVYFLDRIRYHVEDGGPPRTVNVAPEVISAEGHVRGMCLTPDWALNPLRLNAVNRSPAGSPKRNPRSAELTREDLLAESADGSETRTYVDPNRPNPTRSTRSILPGVRKRQQEIIKCGQESPNIGVPICATIYCRIDNLSRGDAVRIVLRGHVWADTFFRYKIPDLAIVSEAHSELAEYAFGIPVHGNRTIQPLAISQNFVFHGIKVPAFREIPLWPIILGCILGAALLAGIIFGLWRCGFFRRKPIYDAQPV 1339
BLAST of Alpha-int-1 vs. TrEMBL
Match: A0A158R999 (Integrin_alpha2 domain-containing protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS6897 PE=3 SV=1) HSP 1 Score: 600.512 bits (1547), Expect = 0.000e+0 Identity = 410/1294 (31.68%), Postives = 639/1294 (49.38%), Query Frame = 3
Query: 288 SKLYLHSNVNSYFGYSISSFIGQKEAYCLVGAPR----------DEID-----DESTNVNVNTGG-VYRISFVNN--DCSKVPMGSEGS-----GHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTS------------YGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTDEGACLXXXXXXXXXXXXE-KIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSK-----------------------------RLV--DIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVR------------------GKFGMSIANLXXXXXXXXXXFAVGCPNCGNDA----TGSVYIYLG--GSKV---PVQVIRPRNL-NHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEK----IIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNS------TVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXX-XXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLY-----KTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQGLKGLNCTLR-----------------------------ISEDTINVVA-LCQFPNPFVNNRNKIHKLYLTLNTGGAFR---------------SYKNRKNKIGSSILT----------MKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHVAPENLEGIYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSS-GNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQN--------------YRNKRSVETIENVVETKSNPVKSA-----SIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIEDMMISTLPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHR----QYKAEIIEDSNGHNGY 3599
+++Y S FGYS++S++ Q +A+CLVGAP+ D +D D T++ NT G +YR++ + DCSK+P+ G + PG W+GG V+ T NG +G+QLGCDPR+L S + E Q LG G C++YTG +++ AC +EGACLSGFS + D + LGMPGS+LTEGN+F ++ ++ ++ LK++P DLK++G+NLGY + L + + G +SFS ++ SSP W N+YRGVV++L L+L I YI D GH+GS FG S+A D NGD+I +IIVG+P+++++ +K R + D+G +Y+FYG+ + +N+ G R G+FG + ++GD+DGD +D AV CP C + G+VY+YLG SK+ P QVI P +L + + S+ D + R F FGWS+A K D+DGN PDL++GDY S QIV LRS+NL WLE P+W LP +++W+ + PC C Y ++L + R+ S K + FR IDLD++++ KRLQ V S++ + S L ++F +VEPR+ Q +W+P+++N++I W LHP KG F S F NPDCG D CV D+ V + D S + IYYKE+ R + + N GENAY+ K+++ IP + K C + +++ I + +C PNPF++ + K+ L T G F+ + N G+ + T + E T +N++ Y L+L + ++ ++ D RNFSS+ + QRV+PE++GP ++ F +SNLGPSP+E I + +S+P +T +G+ ++Y L I Q+++ G+P+ I P V+S G G C PE +I+PL L A++R YR +R ET ++PV+ A + + + Q+IVSCN GS C++I C I L +++ + WA+T F +K SD I T+ I ++ V+G+ I L +S N +F+GI+ ++ T+PI P+++G +LG++LL +II+++W+CGFF+R R A +NG NG+
Sbjct: 48 ARIYSTEKRGSNFGYSVASYVAQSQAFCLVGAPKAQNTYYFLGHDPVDIHSQQDSLTSMFGNTTGLIYRLNLDMDYPDCSKMPIADNNEDRRLYGTLEPGISQWIGGLVAATSNGGDGLQLGCDPRYLYTPSPLTASSKASSASASLTGLEVQNLGTGTCALYTGVSMQYTPIDACVSAEEGACLSGFSGVLEPGDEPGEAFTVLGMPGSYLTEGNVFFGHYQGRRVLKQLRLKSTPQDLKHKGFNLGYAVGLYK--HPQWGNQDSTSSFSRFTILASSPMWVENDYRGVVMLLTEALNLDSIQYIKDKWGHIGSFFGYSIAAADLNGDEIPEIIVGSPYFSENQRFTKPQKGPETSPDMQADQATQLDEDDNQENRYRPITPDVGRVYVFYGRPQEGIMGAGYMENEEDLGQRGRGEYMHEPPVILRGPRRSGGRFGHMVLSMGDLDGDGTEDLAVSCPFCQDSHKSVDKGAVYVYLGRKDSKIKDEPDQVIYPADLPTKGVFACESSFDDAPPLKRPFSAFGWSMASKSDVDGNMSPDLVVGDYESEQIVTLRSRNLAWLEQPLWRLPERPTLDWS--GPQNSPCESSRCHYRVALNLSLHAREAFFSSKRGVALRFRYRIDLDSRIKQENAKRLQSVKLGKSVVEDTVEIQLSNLEGYSVGFRRFQLFELIVEPRWRQTAQQLWKPVVINVTIEMFSEDMDFITTEGAKIPHWSLHPLKGEPTFLSQPMYFSNPDCGYDDICVPDLNVEVYDTSEGFEFGGEGPSTIYYKERVSERNFTVAVRNLGENAYDTKVRVHIPAHFAYIPDKNYACKIESELTEMEEEDVEEKRDGGVVMGGSGARMGVNKSKIPITTVVCSLPNPFLSTSPRWEKIRFQLGTSGVFQPPPGGTRSRSLESPNGSQASGNATGAVVTTPIWLPPRRLEIVAEVTSDNENMRDRKVVAKFSYDLKLFADIKLSSSSVGHTVFDRRNFSSQFTERQRVHPESIGPEFEQIFLVSNLGPSPMENIWVNLSVPLQTESGDFLVYLLDLIRTQNANGGSPLQIPVTPDVVSADGQLRGTCYTPESAINPLRLTAVDRKRSGGSSTSAGRNSARSFLYRGRRDTETAFETASESASPVREARSTVGADLLSEHVQQQKIVSCNRPLENLGSPVCLHIPCKIDRLGRGDAVRIVFRGWVWADTLFRHKFSDIAIVTTATAQIPLYAFGIPVTGNFTITGLTVSQNFVFEGIKMIITQTIPILPVIVGVVLGILLLIIIIIIMWRCGFFKRKRLTDEAVAAASGATANGENGH 1337
BLAST of Alpha-int-1 vs. Ensembl Cavefish
Match: itga3b (integrin alpha-3-like [Source:NCBI gene;Acc:103040573]) HSP 1 Score: 155.606 bits (392), Expect = 6.648e-38 Identity = 268/1129 (23.74%), Postives = 466/1129 (41.28%), Query Frame = 3
Query: 318 SYFGYSISSF--IGQKEAYCLV-GAPRDEIDDESTNVNVN-TGGVYRISFVNN--DCSKVPM-GSEGSGHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRD-------ISFLACS----VTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPS---DLKNRGYNLGYDIKL-ARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRG-VVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGS----KVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLN----STVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRV---FISDLSSSLYKTDIYYKEKYQIRQVVIGI----------GNWGENAYNVKLKITIPKVLEFQGLKGLNCTLRISEDTINVVALCQFPNPFVNNRN-KIHKLYLTLNTGGAFRSYKNR-KNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHVAPENLEGIYVDSRNFSSKI---SPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISI---PFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIE-DMMISTLPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQR 3545
S+FG+S++ + E Y L+ GAPR++ +N+ VN TG VY ++ DC+++ + S S + G WLG +V++ + +G L C R++ G+ E+Q +G+C + D + C+ + EG C + + K V +G GS+L +GN+ + TSP D +R +LG K + + Y + ++ + +VT +P +E RG V L DL + IP +GS FG+S+AV D N D D+IVGAPFY D + GA+Y+F + + + V KG+ G FG+++A +GDI+ D DFAVG P G +G VYI+ G K P QVI ++ FQ FG+SL+G D+DGN PD+++G +I +LR++ +I L + P K +P + C M ++ KI + ++ D L +P R+Q +K + T L +S ST S + ++P + +++ +P + + N + + + + +CG+D C S+++V F ++ D +Y V + + G E+A+ L +TIP L++ GL+ ++ T NV +C NPF +N+ H ++ T + Y ++ + ++ S L+ E D N SI +R ++AP V++ FS K+ S ++ + +G P + F +S G PL ++ + P + NG+ +LY + I GT+ C ++PLNL E+N K RNKR ++ N+ +T++ + P+ + ++ C+ + C+ C + N++ +EI V +AR W T + D + H + +K+ + V + + P+W ++ + G++LL +I L+LWKCGFF+R
Sbjct: 39 SFFGFSVAQHKQTQKGEKYLLLTGAPREKA---PSNLKVNETGAVYSCPITSDVADCTRMDIITSTDSSEMIEGM--WLGVTVASQRDQPDGRVLACGHRYVKVVPGGI---EEQRRMVGKCYVRGNDLTYDNRDDWQNHPYEVCNHNFDMEKEGMC-----NMGISGGMTKSDVYIGCTGSYLWQGNVHV-----------TWRDTSPGNSWDYNDR--DLGQQAKRNSYMGYSVTEETKLLDG-TEFTLVTGAPR---DESRGSVTLAAVGNSDLVVKVTIP--GEQVGSYFGSSIAVTDLNNDNWNDLIVGAPFYFDRYKEQG-----GAVYVFMNE-----NGSFGGKKMVLKGMKGSG-FGIAVAAIGDINQDGFQDFAVGAPFHG---SGKVYIWTGSKEGIMKDPSQVIEGNSVGS----------------GGFQTFGYSLSGGMDMDGNKYPDILVGSL-DDRIALLRARPVIQLSRTFTVEP--------KIVDPLQ-CKDACVTVKMCFAYTLSNGNPDFKNKISVKYTVEADRALRNP---RVQFTDTKLNTNTGVLTFSSSTCQELKLSVTDQIKNKLDPVVFLLNVSLVEPDV--------------PAQSSLQNLDVFPVLSSQQRVTEKAEINFQKECGADNKCSSNLQVKKEFANESQVPFSSNDKGQMMEYDNSVVKLTLLLEVSNLPEPGREAEDAHQAMLNLTIPPTLKYSGLRPQGIDIQC---TANVTVICDLGNPFKSNKQINFHFIFQT-----SITLYTDQIQTQLQLSTLS-------EQSDL----NPVSITLNVR----NNIAPSFTIDNSVENTFFSGKVMGESGMKTI--SDVGSPVKFVFKVSVSG-EPLGEMGTLFVVFDWPVEVLNGKWLLYLTE--------------------ILTTGTSEQRCVPDGQIVNPLNLTLSEKNSK---RNKRDLDV--NLPQTEA---ARTLLSPR---KESHLLDCSKQ-----TARCVTFSCPLTNMSTSAEITV--RARVWNTTM----LEDYANTFRVIVKGHATLMLVTDKPAIKMENKTLEFTVNIDPVPGEETPYNAPLWIYIVAGVAGILLLGIITLILWKCGFFKR 1010
BLAST of Alpha-int-1 vs. Ensembl Cavefish
Match: itga8 (integrin subunit alpha 8 [Source:NCBI gene;Acc:103045927]) HSP 1 Score: 143.28 bits (360), Expect = 4.472e-34 Identity = 238/1073 (22.18%), Postives = 434/1073 (40.45%), Query Frame = 3
Query: 318 SYFGYSISSFIGQKEAYCL---VGAPRDEIDDESTNVNVNTGGVYRISFVNND---CSKVPMGSEGS------GHVSPGYF---NWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTD-----EGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPM-------SMIDKVLLKT---SPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSF-------QNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDK----PCFG-DSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYL----NYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQG-------LKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHVAPENLEGIYVDSR------NFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISY 3356
SYFGYS+ + ++ L VGAP+ S V G VY + +++ C ++P + G P F W G +V T G + C P + +T K ++ +G C I + + C + +G C + S D ++ + LG PGSF +G + A + +++ KV + + SD + Y LGY + + S + +V P N G V V+++ + + +I + +G + S FG ++AV D NGD + D++VGAP Y D SK ++G +Y++ + + F + G +V G++G +IA LGDI+ D D AVG P G+D G V+IY N H + M+ +++R FG++L G D+D N PDLI+G + + ++VV R++ ++ ++ + L P + E + P+ PC D C AKV+G I + + + + LD + KR+ + S T L LN T+ + R E + P+ V ++ S + + + H K + + + I L DCG D C+ D++ LS+ + T++ + + + I N GE AY +L+I P +++ G L+ LNC R+ D+ VV C NP V N ++ G F + R+ + + + +++ N+D KSN S++ L + V ++ G+ + ++ + K P++ + +GP Q + + N GPS L L + P + E++LY ++ I+ PI H N +++P+ L + + + S+P + V ++ + ++C+N + C+ + C + L V++++R WA+TF + ++ +++ + + Y
Sbjct: 43 SYFGYSVDFYHPTQDRSALAVLVGAPKANTSQPSI---VEGGAVYYCPWPSSEPDSCRQIPFDKANNRMIKMNGTREPLEFKSHQWFGATVRT----HRGKVVACAPLYHWRTV----KMSSEMDPVGTCYIAVQNFSAYAEYSPCRTNNPDPEGQGFC----QAGFSVDFTKDGTLVLGGPGSFYWQGQVITAGVAEILNGYSLKAILRKVQGEKQTGAASDAYDDSY-LGYSVAVGEF-----------TGDSQQELVAGVPRGAQN--FGYVAVINS----TNLTFIQNFTGEQMASYFGYTVAVTDLNGDGLDDVLVGAPLYMDREFESKPR-EVGRVYLYLQEDALLFSPAIK-----LTGTHVFGRYGSAIAPLGDINQDGYLDVAVGAPFAGDDRGGRVFIY--------------NGQHSGLR-----MEASQVLRGAWASSGIPAGFGFTLRGDSDLDNNQYPDLIVGAFGAGKVVVYRARPVVTVDAQLLLTPRILNPEDKTCHLPNSDTMVPCLRVDVC-------AKVSG--IGIPDNVAVNMELQLDWLKQRGAVKRVLFLDSHQHHRTLQLLLGQRDHRRCLNHTIYL-------RDEGEFRDKLSPISVALNYSLDQRAPLQGQQLRPI---LDHYSKSFHHEQANILL----DCGDDNMCIPDLK-----LSAKMDHTELAIGDDNPLL-LTINAANQGEGAYEAELQIRFPLEVDYNGVERRREDLQILNCEHRMENDSQVVV--CDLGNPMVAGSN--------VSVGLRFSA---RRLEEADAHIGFELQVLSSNKDNPKSN---SVNLTLNVVARAEV---DIRGVSLPAQVVLPFPRWEPKEKPVRE---DDIGPQVQHIYELHNKGPSSLSGTVLEVGWPSRHRE-EHLLYAMQIITD-----GPIR-------------CHAN-----GTLNPMELET---------STLQDTPELLGFLRNSSSPTRRRRSVSSTQSYSSKTLNCSN-------IHCLMLKCIVGRLDRGQSAVVKVRSRLWAQTFLQRRNDQYLLNSTVAFQVTGMPY 966
BLAST of Alpha-int-1 vs. Ensembl Cavefish
Match: itga2b (integrin alpha-IIb [Source:NCBI gene;Acc:103045206]) HSP 1 Score: 123.635 bits (309), Expect = 5.408e-28 Identity = 196/777 (25.23%), Postives = 302/777 (38.87%), Query Frame = 3
Query: 318 SYFGYSISSF-IGQKEAYCLVGAPRDEIDDESTNVNVNTGGVYRI---SFVNNDCSKVPMGSEGSGHVSPGYF--------NWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIY-------------TGSTIRDISFLACSVTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLA----------NFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSP-FINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQND-VFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGD----SCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQ-------GLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTL 2504
SYFG+S+ F K +VGAPRD NV + GG I + C ++ G + + G WLG TV L C P F G K E +G C + G+ + + A + D C + S+D ++ V LG PG F +G I A F P+ + V SP LGY + G SP ++ N++ S + G + L K L + S FG+ +AV D N D DI+VGAP + + S++L ++G +Y++ K Y +S D G G+FG +IA LGD+D D +D AVG P G G V+IY+G S + P N+ V+ +P + + FG+SL G DIDGN PDLI+G + + ++VV R+K ++ + P N +K C D SC + + + V+G KI E+I+ + I LD KL+ +R L+ + + S T E+ L + K + LI S N ++ S+ MLH G + I DCG D C+ D+++ L D E + +++ N GE AY +L + +P +Q G L C + +D +V+ +C NP + L+ ++
Sbjct: 45 SYFGFSVDFFEANNKNVSVVVGAPRD-------NVGASPGGSVFICPWTSTQGPCQRLAFDQTGDENFTFGDMLLMSHKSDQWLGA----TVRAYKSSILACAPLFHWNVVQG--KDEAMNTPVGNCQLLDTLTGNLANYAPCRGTAVEESYTRARNYQDRRYC----EAGFSSDVTKDGTVVLGAPGGFFFQGQIITAPLQKIMASGKTFSPIHYL--VGEAKSPERYHQYDVYLGYSVATGNF---SAGSSPDYVVGVPNDLNTIGS----VKIFSGSAVTLTAKKSLK--------GSQVASYFGHCVAVTDINSDGKDDILVGAPLFME-LLPSQKLREVGQVYVYL----QKEGYNISPAPDQTLTGTKTYGRFGSTIAPLGDLDHDGFNDVAVGAPGSGEG--GWVFIYMGQS----DGLNPHNM-QVIESP-------FQPPKPAAAFGFSLRGGTDIDGNGYPDLIVGAWGADKVVVYRTKTVVKTRPTLSFFPDF-------LNPDEKLCEADGTLVSC-FRIEMCISVSGYKI--PEEIVLNMEIQLD-KLKPTMARRTLLMEGHQ----PHSQFQLSLNRDTGEVCKNLTAYLVAEFKDKLSLILI------------SLNYSLANSSGAMLHEQSGIVGQTQIIL-----DCGEDNVCIPDLKLAAEADRQPLLIGD----ENPAL--LIVKAENRGEGAYETELHVRLPPRTHYQSVLSNKEGFTRLLCAPK--KDNGSVIVVCDLGNPMKAGQKLQAGLFFSM 728
BLAST of Alpha-int-1 vs. Ensembl Cavefish
Match: itga6b (integrin alpha-6-like [Source:NCBI gene;Acc:103030335]) HSP 1 Score: 114.39 bits (285), Expect = 3.579e-25 Identity = 224/904 (24.78%), Postives = 368/904 (40.71%), Query Frame = 3
Query: 999 VVVTSSPHWKSNEYRGVVLVLDTKLDLSQIL---YIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDI-GAIYIFY---GQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLG---GSKV-PVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPC---------------FGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIR---VFIS-DLSSSLYK--------TDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQG--LKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSI-DYFLRLAGFVHVAPENLEGIYVDSRNFSSKISPLQRVYPET-LGPPYQATFTISNLGPSPLEKIN---LTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHN--------VIFKGIEDMMISTLPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHR 3551
VVV +P + G V++L + + S L YI + G L S+FG LA+ D NGDK D++VGAP Y + + DI GAIY++ G ++ + + D FG+S+ +LGDI+ D +D A+G P + GSVYIY G G K+ P QV++ ++LN L FG+SLAG D+D N PDL IG S + I V R++ ++ +E V + P K ++ K N D C + R S++ + +K+ ++ F + + DT Y+ +V + K ++ + ++ + G+ P+ VN+ S F L P G ++ F CGSD C S+++ +F S + +S +K I ++ +I V G++AY L + P L + K + + + A C+ NPF RN + Y+ L TGG N++ + ++++ T + + I L L+G P LE F+ ++ + E+ +G F + NLG PL+ L I P T++ + +LY +K IS G C ++ ++PL+L I+ + + R KR V ET S+ K + K K++ ++SC + C+N C + L S + +KAR W TF F +++ + + S L P N+ +F G + S LP W I++ LLGL+LL L+I +L+KCGFF+R +
Sbjct: 221 VVVAGAPRVN---HSGAVVLLKKESETSPQLITEYILEGEG-LASSFGYDLALLDVNGDKWQDLVVGAPQYFEKNS------DIGGAIYVYINKNGNWANAVRTRIDGPKDSM--------FGLSVESLGDINLDGFNDVAIGAP-YEDGGMGSVYIYHGSDSGLKLKPAQVLKGKDLNIKL-------------------FGYSLAGNMDLDNNQYPDLAIGSLSDT-IAVFRARPVVNIEKTVTMTP--KELDLNKKNCGDSICLQVRTCYKYTSNSKDYSAPLRIKYSIEVESKRKKLGLPSRVTFSPHSNTDTD-----YESSGIVDLSKANEQKCVDKTIKLQDTIKDKLRGI--------------PIEVNV-----EILYPSARRKRDVAFSQLLPVLGSSQPAANEVNFVKEGCGSDNICNSNLKLQYIFCSREPNSDNFKPLPLVGDVPVISLSDQKEIALEVTVTNQNGDDAYETVLIGSFPGALSYSASRTKTPDKVVICVANQNGSQAECELGNPF--KRNSVVTFYIILGTGGISLDM----NEVA---VNLQLKTTSDQPPLSITKKANVIVQLLLSLSGVAK--PSQLE--------FTGQVKGESAMKTESEVGSQIDYEFRVINLG-KPLKSFGTAFLNIQWPKSTASNKWLLYLMK--------------------ISSTGVERIGCGRTQE-VNPLSL--IQES--SSARLKREVGK-----ETSSDDPKFSLFTDKRKSK---VLSCED------GANCVNFKCPLQG--LDSNAVIALKARLWNSTFL-----------EDFADMNYVDILVKASLSLDSAPKNVVLKNEDAQVRVTVFPGRKAAQYSGLPWWIILVAILLGLLLLALLIFLLYKCGFFKRSK 987
BLAST of Alpha-int-1 vs. Ensembl Cavefish
Match: itga3a (integrin alpha-3 [Source:NCBI gene;Acc:103032002]) HSP 1 Score: 111.309 bits (277), Expect = 3.043e-24 Identity = 137/498 (27.51%), Postives = 222/498 (44.58%), Query Frame = 3
Query: 309 NVNSYFGYSISSFIGQKEA--YCLVGAPRDEIDDESTNVNVNTGGVYR--ISFVNNDCSKV------PMGSEGSGHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSI------------YTGSTIRDISFLACSVTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRG-VVLVLDTKL--DLSQILYIPDLSGH-LGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGG----SKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLP 1712
N S FG S++ A LVGAP++ E T TG ++ IS DC + P+ +G + G WLG SV++ G G L C R++ KT + L IG+C I Y ++ + EG C + + + V G PG + +GN F+ P D + K DL+ +GY + G+ + + + + VV+ +P +E +G V+L + K +S++ L G +GS FGNS+A+ D N D ++IVGAPFY D +R + GA+Y+F + + ++ D+F + FGM++A +GD++ D DFAVG P ++G VYI++G SK P QVI +++ + FQ FG+S++G D+D N PD+++G ++V+LRS+ +I L+ + P
Sbjct: 53 NPGSLFGLSVALHQQTNPARYLLLVGAPKERA--EPTISANETGDMFTCPISTDPRDCRRSNLITSEPLDPDG---IVEGM--WLGVSVASQPQG--GRVLACGHRYIRKTG-----DKNILPMIGKCFIRGNDLNYEPDKDYQWQYRYEVCDPTTDLLQEGLC-----NMGISAVITQKDVIAGAPGCYNWQGNSFVIYRNPNDKYD--IQKIKFPDLQQGNIYMGYSV----------GKDSGVLNEAEDTVVSGAPR---DESKGSVILAKEIKKPDGVSELRTQVILRGQQVGSYFGNSIAIVDINNDGWKELIVGAPFYFD-----RRKEEGGAVYLFMNE-----NGSFQDKTDLFFTGPKQSGFGMAVAAIGDVNQDGFQDFAVGAP---YHSSGRVYIWMGSKDGLSKKPSQVIEGKDITN----------------GGFQTFGYSISGGLDVDDNKYPDMVVGSL-DDRVVLLRSRPVIHLKKSFTVTP 486 HSP 2 Score: 53.9138 bits (128), Expect = 1.084e-6 Identity = 75/266 (28.20%), Postives = 119/266 (44.74%), Query Frame = 3
Query: 2757 LGPPYQATFTISNLGPSPLEKI---NLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIEDMMISTLPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQR 3545
+G P + FT++ L PL + + P++ N + +LY L ++ GT+ CR E+ ++PLNL ERN Q R +RS E V P A++ + R + +SC +SG G +C C + N+T S + ++AR W T L DS + + I+ + D + V+ G ++M+ P+W I++ L G+ILL LIIL+LWKCGFF+R
Sbjct: 719 IGSPVEFNFTVT-LNGRPLGSLGFLQVGFEWPYEVENEKWLLY-------------------LAEIQVRSGTSVSFCRPAENIVNPLNLLVSERNSIQ--RRRRSDEGSAVVY-----PEAQAALNSQSMWRRRVQLSC---RSG-GGAKCQTFSCPLLNMT--STTVLMVRARLWNST-MLEDYRDSETRIEVLATLQLITDKPTIRMDNASSTFYV--EVVPAGQKEMLYEA-PLWIIIVSVLAGVILLGLIILLLWKCGFFRR 947
BLAST of Alpha-int-1 vs. Ensembl Sea Lamprey
Match: itga8 (integrin, alpha 8 [Source:ZFIN;Acc:ZDB-GENE-080220-48]) HSP 1 Score: 130.183 bits (326), Expect = 9.016e-31 Identity = 220/971 (22.66%), Postives = 408/971 (42.02%), Query Frame = 3
Query: 783 KVALGMPGSFLTEGNIFLANFGPM-------SMIDKV--LLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSK----VPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDK----PCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNP----DCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQG-------LKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHVAPENLEGIYVDSR------NFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIEDMMISTLPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHRQYKAEIIEDSNGH 3590
+V LG PGSF +G + A + SM+ + +TS + LGY + + F + V +++ Y G+ LD + + + SG + S FG S+AV D NGDK+ D++VGAP + D + K L ++G +Y+F + + F+ + F G + +FG ++A LGD+D D +D AVG P G + G VYIY G P QV+ + P S M S +FG++L G D+D N PDL++G + +S+ +V R++ ++ +E + L P ++E + CF + Y + + K A +S++E + + LD + KR +++ S + + + + ++ L + + KL P+ V+++ + ++ ++ L P + + SP + + DCGSD CV ++ LS+ + +Y ++ + + + N GE AY +L + +P ++ G L L C + T +VV C NP N + L ++ ++ + S + + N+ +SN + + L + F V NL G+ + + N+ +P++ E +GP Q + + N+GPS + + +S P + S+ + +LY L ++ P S S++ + N +L +S D N K+N R+ E ++KS P+ ++C+ S EC++I C + L ++IK+R WA+ F + I ++ ++ + Y L ++ +V + + +P+W I++ L GL+LL+L++ +WK GFF+R R + + E+ H
Sbjct: 199 RVVLGGPGSFYWQGQLITAPSEAVMKDPTSESMVRSIEGQKQTSSAPPSYDDSYLGYSVTVGE----------FTGDNQQDFVTGVPKGFRTLGYVGI-------LDGENMTSLYNFSGEQMASYFGFSVAVTDVNGDKLEDVLVGAPLFMDRGSDGK-LREVGRVYLFLQERTLSFR-----EPQRFTGEEMYSRFGSALAPLGDVDQDGFNDVAVGIPFGGENRQGLVYIYNGDKDGLKPAPSQVLESQ-------WPGTS-------MPS--SFGYALRGTVDVDKNGYPDLVVGAFGASKAIVYRARPVVTVEAELQLEPQIINLESKDCKQAGSTSSFACF--TVNYCVQVVGKGA---LSSTE---LNLELQLDRLKQKGTIKRALFATTQQSRYEQRITINKGAGPTCNKLTVYLRDETEFRDKLT---PIAVSLNYTLMEEATLASQG--------LRPIRNH---FSPDHIQKQAHILLDCGSDNICVPSLK-----LSALSDRKQLYIGDENSL-VLTVNSRNDGEGAYEAELHVVLPPEADYVGVVRNNESLAKLTCAYKTENLTRSVV--CDLGNPMRGGTNLLVGLRFSV-----------QRLEEAVSPIQFSLHIKSSNEKSPESNTETVV---LPVGVFAQV---NLVGVSIPDQIVLPIINWEPVENPVKE---EDIGPLVQHVYELRNIGPSRVGSAEMDLSWPLR-SDDDYLLYVLALNTEGPIKCVPDSSSKINPL---------NLKL-SNSHDAPGANETGNQHKENPRDIHRRELQRGEADSKS---------PR-------TLNCSTS-------ECLHIRCTVQTLESGHNAVLQIKSRLWAKAFMEKESQQHTIESAAHFFVNDMPYKIRPE-KLPSGAFQVTTSVAWANQDGNQ--PVPVWVIIVAVLAGLLLLSLLVFAMWKMGFFKRVRPPQEDNGEEQQLH 1043
BLAST of Alpha-int-1 vs. Ensembl Sea Lamprey
Match: itga8 (integrin, alpha 8 [Source:ZFIN;Acc:ZDB-GENE-080220-48]) HSP 1 Score: 106.301 bits (264), Expect = 1.663e-23 Identity = 135/531 (25.42%), Postives = 234/531 (44.07%), Query Frame = 3
Query: 963 GRSPFINSFSNEVV---VTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGS----KVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLE-----NPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQG----LKGLN----------CTLRISEDTINVVALCQFPNPFVNNRN 2477
G S + F+ + V VT P K + G VL+L+T D+S ++ + L S FG ++AV D N D + D++VGAP Y + S RL ++G +Y++ Q G +V G++G +I +GD+D D +D AVG P G D TG V++Y G +P Q +R R + L +FG++L G D+D N PDLI+G + + +V R++ ++ + +P+ L P ++S T Y SC + + KV+G++I + + V + LD E +R+ SKS L + + L + + KL+ P++V+++ S +S++ + +L+ ++ L DCG D C+ D++ L+ L +T+++ + + + + N GE AY +L++ +P ++ G +GL CTL+ +T VV C NP N
Sbjct: 35 GYSVAVGEFTGDSVQEFVTGVP--KGSSTFGYVLILNTT-DMSTLMNV--TGEQLASYFGYTVAVTDVNNDGLDDLLVGAPLYMERG-SQGRLEELGRVYLYLQQAPLSL-----GAAQTLSGRDVYGRYGSAITPVGDLDQDGYNDVAVGMPFGGEDGTGVVFVYNGRDTGLMAIPSQTLRGRWASQGLPA----------------SFGFALRGGTDLDSNGYPDLIVGAFGVDKAIVYRARPVVTVSAELTVSPMVLHPENRSCMVTGY------ATLQSC-FSVEFCLKVSGKRIPVT--VGMEVEVLLDKLKEKGAIRRVLFRDSKSPRFRTRLQMGRGLQEQCSTLTAYLRDESEFRDKLS---PIVVSLNYSLDGEYNSNHSTVVP----ILNHYQADHIQKQAYILL---DCGEDNICMPDLQ-----LAGYLERTELFMGDTSPL-TLTLNCSNHGEGAYEAELQVAVPPEGDYIGSTRSSEGLGTSDGNVFAPICTLKEENNTRLVV--CDLGNPMKAGTN 511
BLAST of Alpha-int-1 vs. Ensembl Sea Lamprey
Match: ITGA6 (integrin subunit alpha 6 [Source:HGNC Symbol;Acc:HGNC:6142]) HSP 1 Score: 89.7373 bits (221), Expect = 2.439e-18 Identity = 168/747 (22.49%), Postives = 291/747 (38.96%), Query Frame = 3
Query: 438 VYRISFVNN--DCSKVPMGSEGSGHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTDEGA---CLXXXXXXXXXXXXEKIKVA----------LGMPGSFLTEGNIFLAN----FGPMSMIDKVLLKTSPSDLKNR-----GYN--LGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLD----TKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIG-AIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGL----VEPRFEQIKLNI---WQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISL--FRNPDCGSDYNCVSDIRV---FISDLSSSLYKT-------DIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQGLKGLNCTLRIS----EDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGG 2516
VY+ F N DC +V ++ W+G V+ G G L C R+ ++ G+ + + + IG+C + + +D+ D G+ C S ++ A G PG++ +G +A F + D +T KN YN LG+ + + + R F V +P + G V+VL + L Q +Y +L+ S+FG + + D N D LD++VGAP Y D R DIG A+Y++ Q ++ N + FG+++AN+GDI+ D +D AVG P D +G V+IY GG + + P+ S + I+R+ + FG+S+ G D+DGN+ PDL+IG S +I +LR++ +I P L+ + K I+ N + + S KAK A + I+L E +R Q + S+ S + + N + S + G + Q++ NI +P+ + ++ + L P + S + F CG D C S++ + + S + YK ++ + + + I N G++A+ L + +P + + G + + + +A C+ NP R + YL L+T G
Sbjct: 82 VYQCPFTANTDDCQRVIFDNDADPTTESKQDQWMG--VTVKSQGPGGKVLACAHRYETRRFVGLPEETRGM--IGRCYVLS----QDLRMNEQDEMDGGSWQFCAGRPDSHEQFGVCQQGLDAGFTRDFHYIYFGAPGAYNWKGIAHVAQRNSTFYEQGIFDDGPYETGDERWKNEKLVPVAYNSYLGFSMDSGKSVMA-RNRLSF---------VAGAPRAN---HTGAVVVLKKDSLSSLTPEQTIYGEELA----SSFGYDVTLADLNNDGWLDLVVGAPQYFD------RREDIGGAVYVYMNQRGGFDEHNFIRLNGTKDSM-----FGLAVANIGDINQDGFEDIAVGAPY---DGSGKVFIYHGG--------------RMGINPKASQV----IVRTVEKFGYSITGGMDVDGNTYPDLLIGSL-SDKIALLRARPVI---TPNILVTSDKDIDINVKNCENDKRICIKVKACFSYKAKPAN----------YNPIINLTYTFEAEMDRRKQGLGSRVSFLNRGSNSPEEYVLSGSLVLMGQGREKCTEKTMQLQENIKDKLRPIPLQLTYEINQVVKTKRQASLS-----LQPVLDAQVPSRMKTEINFVKEGCGPDNICQSNLILKYNYCSREENEKYKALKSMSGQQVFSLSDQKDLALEVSISNTGDDAHEAHLIVNLPDAVSYGGFRKKTVPEEVQLVCVANANGSLADCELGNPL--KRGQAVSFYLILSTSG 750
BLAST of Alpha-int-1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001557.1 (pep scaffold:Pmarinus_7.0:GL480593:314407:372761:-1 gene:ENSPMAG00000001371.1 transcript:ENSPMAT00000001557.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 80.8777 bits (198), Expect = 1.284e-15 Identity = 127/476 (26.68%), Postives = 198/476 (41.60%), Query Frame = 3
Query: 372 LVGAPRDEIDDESTNVNVNTGGVYRISFVNN---DCSKVPMGSEGSGH--------VSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTI--RDISFLACSVT-------DEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYN--LGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGH-LGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNV-RGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSI 1727
LVGAP+ D + V+ G +++ N C+++ +G GS H + WLG S++ N +G L C R+ K ++ V + + L G C I S + C + G+C +G + + V LG PGSF G + L N + + S S+ + GY+ LGY I F + S EVV + E V ++ + I SG +GS FG++L D N D + D++VGAP + S+ R D G ++++ + + + G+N FG IA LGDID D D AVG P + G+VYIY G + H + K I FG S++G+ D+DGN PD++IG ++S V+ R++ +I +E V +LP S +I
Sbjct: 2 LVGAPK--ADSDLLTETVHPGAIFKCRVQPNGEQSCTEMLLGPPGSRHNHQCGRTCLEERDNQWLGVSMARQ-NKPDGKILACAHRW--KNAFYVREWK---LPHGLCYIIPASLAPSESTHIIPCFKEHQKKYGEEHGSCQAGIAGLFL-----EDAVVLGAPGSFYWTGTVILHN-----LTTRANSFYSESERRAVGYSSYLGYSITAGH----------FTHPQSTEVVGGAPQRANVGE------VYLFRIQRGGLHIIRHFSGKKMGSYFGSALCAVDLNSDGLSDLLVGAPTH-----SASR--DEGRVHVYVNHGNGDLV-----EQEPLVGLNAYNAHFGAVIAALGDIDDDGFPDVAVGAPQ--EEEFGAVYIYHGSQN---------GITH----KHSQRIFGKSIESGISMFGQSISGQVDLDGNGYPDVVIGAFTSDVAVLFRTRPVITVEASV-VLPRSVNI 415
BLAST of Alpha-int-1 vs. Ensembl Sea Lamprey
Match: ITGA6 (integrin subunit alpha 6 [Source:HGNC Symbol;Acc:HGNC:6142]) HSP 1 Score: 77.7962 bits (190), Expect = 1.042e-14 Identity = 76/229 (33.19%), Postives = 116/229 (50.66%), Query Frame = 3
Query: 1002 VVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGH-LGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVI-RPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLI 1682
VV +P + G VL+L + ++ L G L S +G ++ + D NGD +D++VGAP++ D SK+ V GA+Y++ ++D + +G G FG++IA +GD+D D D AVG P + +G VYIY GG P VI +P + H S FG+SL+G D+DGN PDL++G S Q+V+ RS+ +I
Sbjct: 218 VVAGAPR---AAHMGAVLLLAVNYSHNSLVPEVMLRGEGLASAYGYAVCLADLNGDGWMDLLVGAPYFFDQ---SKKSVG-GAVYVY---LNDNDGGGERKKRVRLEGTAGSG-FGLTIAAIGDVDLDGFQDVAVGAPF---EESGRVYIYSGG---PSGVITKPAQVWHA----------------SQPGFGYSLSGGLDVDGNLYPDLLVGSL-SDQVVLFRSRTVI 412
BLAST of Alpha-int-1 vs. Ensembl Nematostella
Match: EDO48984 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RHH6]) HSP 1 Score: 99.3673 bits (246), Expect = 6.561e-21 Identity = 74/203 (36.45%), Postives = 111/203 (54.68%), Query Frame = 3
Query: 1119 GSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGK-FGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGG----SKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLP 1712
GS FG S+A D NGD D+++GAPFY S+K + G ++++ ++ T S ++ + +G FG ++ANLGD+D D +DFAVG P + TG VYI+ G S+ Q+I+P ++N L T FG S+AGK D+DGN PDL+IG Y+S +V+LRS+ +I + V + P
Sbjct: 323 GSGFGFSVAGVDVNGDGWTDVVIGAPFY-----STKNSPNEGRVFVY----TNNGDGTFSKTRELAPSIARKGAYFGHAVANLGDLDQDGYEDFAVGAPY--EEGTGVVYIFNGSETGVSQKAGQLIKPTDINQDLKT-----------------FGSSIAGKLDMDGNGYPDLLIGAYTSDSVVLLRSRPIIDINTDVNITP 497
BLAST of Alpha-int-1 vs. Ensembl Nematostella
Match: EDO49372 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RG71]) HSP 1 Score: 69.707 bits (169), Expect = 6.659e-12 Identity = 71/236 (30.08%), Postives = 103/236 (43.64%), Query Frame = 3
Query: 996 EVVVTSSPHWKSNEYRGVVLVLDT----KLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFY--GQVSDKF-KYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLI 1682
E ++ SSP ++++ RG V+ D ++ +S L +P GS FG S+ D N D + D++VGAP Y+ D G +Y++ G VS KY V VG P G D G+VYIY G R R VT S M+D + + FG+SL G D+D NS PD+ +G YSS + V+LRS+ ++
Sbjct: 269 EQLIGSSP--RADDIRGRVMAFDVVGDEQIKVSFTLPLPP-DNQPGSAFGFSMCAVDLNNDGLSDLLVGAPRYSYDK-------DEGRVYVYVNNGLVSITIPKYVV-----------------------------------VGAPYGGPDRRGAVYIYHGTKDGIDTKYRQR------VT--ASDMNDP----ALKTFGYSLTGGLDMDDNSYPDVAVGAYSSDRAVLLRSRPIV 447 HSP 2 Score: 51.2174 bits (121), Expect = 2.653e-6 Identity = 80/371 (21.56%), Postives = 138/371 (37.20%), Query Frame = 3
Query: 2193 DYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGEN-AYNVKLKITIPKVLEFQGL---KGLNCTLRISEDTINVVALCQFPNPFVNNRNK-IHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHVAPENLEGIYVDSRNFSSKISPLQRVYPE-TLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETF 3287
D CV D+ V S S +K D+ Q+ V I + N E+ AY K+ +T P L + G+ + + C I+ D A+C PF K L+ T G S+ + +E T D + S+NK S+ ++ + ++ +L D FSSK + V E +GP Q T + N GP ++ +T+S+P+K S + Q HG+ + +PLN+ + N +E+ V K + + + + +SC+N V+C+ C + L ++ + +R W +T
Sbjct: 610 DKVCVPDLSVSGSASFSGGFK-DLRIGISQQM-LVTITVENKAEDFAYPGKVLVTYPSFLGYVGVAAKQDVQCKRLITSDDFEQ-AVCLVGMPFQGKTKKTFDMLFATAGVKGNI------------SMFKVDLEATSPGADANPSDNKVSLQLAVKFEADLSISGASLP----DELVFSSKGKTSEEVRTERDIGPLVQQTIMVRNNGPGAVDGSEVTVSLPWKKSEEDLSYLLYLLSVQ----------------------VHGSAATCDVKTNPLNI-----KMSNNTDKPAVLESTSRVGANKRT---------RKEVKKGDQLSCDN-------VKCLLFTCRLGKLEQGEGAEIIMTSRLWQDTL 918
BLAST of Alpha-int-1 vs. Ensembl Medaka
Match: itga8 (integrin subunit alpha 8 [Source:NCBI gene;Acc:101164748]) HSP 1 Score: 117.472 bits (293), Expect = 3.563e-26 Identity = 142/553 (25.68%), Postives = 234/553 (42.31%), Query Frame = 3
Query: 312 VNSYFGYSISSFIGQKEA---YCLVGAPRDEIDDESTNVNVNTGGVYRISF--VNNDCSKVPMGSEGS------GHVSPGYF---NWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTD-----EGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIF-------LANFGPMSMIDKV--LLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSG-HLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMS-----LKAKVAGRKISTSEKIIFRVYIDLD 1868
V SYFGYS+ + + LVGAP+ V G VY + V+ C ++P + + G P F W G SV T G + C P + +T K + + +G C + + + C D +G C + S D +++ ++ +G PGSF +G + L + +++ +V KT+ SD N LGY + S + ++ P N G V ++++ + + YI + +G + S FG S+AV D NGD D++VGAP + + T SK ++G +Y++ F V + G G+FG +IA L D++ D +D AVGCP G+D+ G V I+ G + Q + L+ L + S S FG++L G D+D N PDLI+G + + ++ V RS+ ++ +E + L P N D+ C ++ + A V+G +I TS + R + LD
Sbjct: 46 VGSYFGYSVDFYQATSDRNTISVLVGAPKANTSQPGI---VEAGSVYYCPWPGVSGTCRQIPFDNSNNRMIKVNGTREPLEFKSHQWFGASVRT----HKGKVVACAPLYHWRTV----KRDGEKDPVGTCYVAVQNFSAYAEYSPCRTNDPDPEGQGFC----QAGFSVDFTKEGRLVVGGPGSFYWQGQVMTTGIAEILNGYSLKAVLRQVPGEKKTAASDDMNDDSYLGYSVATGEF-----------TGDSEQELIAGVPRGAQN--FGYVAIINS----TNLTYIQNFTGTQMASYFGYSVAVTDLNGDGTDDVLVGAPLFMERETESKPR-EVGRVYLYLQLAPLTFSKPV-----ILTGTYTFGRFGTAIAPLEDVNQDGYNDVAVGCPFGGHDSGGRVLIFNGNKDILAQGL---TLSQELKAARTS-------SGSLPGFGFTLRGGQDLDNNQYPDLIVGAFGADEVSVYRSQAVVSVEATMTLTPKV-------LNPDDRQCLLPQTDIIVTCLKVEVCAGVSGVEIPTS--VDLRAELQLD 541 HSP 2 Score: 73.9442 bits (180), Expect = 1.024e-12 Identity = 115/492 (23.37%), Postives = 204/492 (41.46%), Query Frame = 3
Query: 2181 DCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQGLKG-------LNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLA-GFVHVAPENLEGIYVDSR------NFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRIS------QQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISH------NVIFKGIEDMMISTLPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHRQYKAEIIED 3578
+CG D C+ D++ LS+++ +T++ + + + + N GE AY +L IP ++ G+ LNC ++ ++ VV C NP V L+ G R R G I +++ N+D SN + L+ V A +L G+ S+ N+ K P++ + +GP + + N GPS + + L + P + + EN+LY ++ + + ++S NP+ + Q+ +++ T P L ++ + +R+KRSV T E+ N C N + C+ I C + L V I++R WA T FL + +D I S +S++ +S + P + H ++ G D+ + +P+W I+L LLGL++L ++ L +WKCGFF R R + I D
Sbjct: 635 NCGDDNVCIPDLQ-----LSATMDRTELVIGDDNLVMLTITAV-NQGEGAYETELFARIPPEADYIGVSRRVESVSMLNCDYKMINESRMVV--CDLGNPMVTGTE--------LSVG--LRFSVQRLEDSGPEI-HFELQIHSSNKDNSDSN-------LISLSLSIVARAELDLRGVSHPSQVVLPFPNWEPKEKPVKE---DDVGPQVTHIYELHNYGPSSIGEAELQVGWPSRFRD-ENLLYAMEIQTDGPISCRTNTSLNPLGL----QISALQDT-------------PELLGFLKNSSAPTHRHKRSVSTAESYSSKTLN--------------------CTN-------ISCLRIMCVVGRLDRGQSAVVRIRSRLWAHT-FLQRRNDPYILNST------VSFMV-ISVPYRSQPSTLPHRRTSMGTLVLWGTPDVSFA-VPLWVIILAILLGLLVLAILTLAMWKCGFFDRARPPADDDISD 1043
BLAST of Alpha-int-1 vs. Ensembl Medaka
Match: itga3b (integrin subunit alpha 3 [Source:NCBI gene;Acc:101157734]) HSP 1 Score: 113.62 bits (283), Expect = 5.364e-25 Identity = 137/477 (28.72%), Postives = 224/477 (46.96%), Query Frame = 3
Query: 318 SYFGYSIS---SFIGQKEAYCLVGAPRDEIDDESTNVNVNTGGVYR--ISFVNNDCSKVPMGSE-GSGHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDI-------SFLACS----VTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLD-TKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIM--RSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWL 1688
S FG+S++ +G ++ LVGAP+++ + +VN TG VY IS +DCS++ + ++ S + G WLG +V++ S G L C R+ + G +E+Q IG+C + + D S+ C+ + EG C + + V LG GS+ +GN+ + P + +L NR +GY + + VVT +P + S RG V++ + ++ +S + IP +GS FG+SLA D N D D+IVGAPFY + GA+YIF + + F+ VS + V KG G FG ++A +GD++ D DFAVG P TG VYI++G K ++ + S M + + + +FQ+FG+S+ G D+DGNS PD+++G +I ++R++ +I L
Sbjct: 39 SLFGFSVALHEQTVGSRQHLLLVGAPKEKANG-LKDVN-ETGAVYACPISTTFDDCSRMDLVTQPSSSEMVEGM--WLGVTVASQKGHSAGRVLMCGHRYAKIVTGG---TEEQRRMIGKCYVRSNDLTLDATDFWQTDSYEVCNPGYDMESEGQC-----NLGISGGIGYTDVYLGAVGSYTWQGNVHVIWRNPEPDNSWEANGKAFGELDNRNIYMGYSVL----------EEQKLLKQDQYTVVTGAPRFDS---RGSVILGEMSQAKISLMQLIP--GEQVGSYFGSSLAAADLNNDDWNDLIVGAPFYFERQNQIG-----GAVYIFMNE-NGSFQ-NVSTK--VLKGPAYSG-FGFAVAAIGDVNQDGFQDFAVGAP---FQETGRVYIWMGSKKG--------------ISDKYSQMIEGKSVGDGNFQSFGYSIDGGMDMDGNSYPDMVVGSL-DDRIALIRARPVIHL 460
BLAST of Alpha-int-1 vs. Ensembl Medaka
Match: itga3b (integrin subunit alpha 3 [Source:NCBI gene;Acc:101157734]) HSP 1 Score: 113.235 bits (282), Expect = 8.816e-25 Identity = 137/477 (28.72%), Postives = 224/477 (46.96%), Query Frame = 3
Query: 318 SYFGYSIS---SFIGQKEAYCLVGAPRDEIDDESTNVNVNTGGVYR--ISFVNNDCSKVPMGSE-GSGHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDI-------SFLACS----VTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLD-TKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIM--RSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWL 1688
S FG+S++ +G ++ LVGAP+++ + +VN TG VY IS +DCS++ + ++ S + G WLG +V++ S G L C R+ + G +E+Q IG+C + + D S+ C+ + EG C + + V LG GS+ +GN+ + P + +L NR +GY + + VVT +P + S RG V++ + ++ +S + IP +GS FG+SLA D N D D+IVGAPFY + GA+YIF + + F+ VS + V KG G FG ++A +GD++ D DFAVG P TG VYI++G K ++ + S M + + + +FQ+FG+S+ G D+DGNS PD+++G +I ++R++ +I L
Sbjct: 39 SLFGFSVALHEQTVGSRQHLLLVGAPKEKANG-LKDVN-ETGAVYACPISTTFDDCSRMDLVTQPSSSEMVEGM--WLGVTVASQKGHSAGRVLMCGHRYAKIVTGG---TEEQRRMIGKCYVRSNDLTLDATDFWQTDSYEVCNPGYDMESEGQC-----NLGISGGIGYTDVYLGAVGSYTWQGNVHVIWRNPEPDNSWEANGKAFGELDNRNIYMGYSVL----------EEQKLLKQDQYTVVTGAPRFDS---RGSVILGEMSQAKISLMQLIP--GEQVGSYFGSSLAAADLNNDDWNDLIVGAPFYFERQNQIG-----GAVYIFMNE-NGSFQ-NVSTK--VLKGPAYSG-FGFAVAAIGDVNQDGFQDFAVGAP---FQETGRVYIWMGSKKG--------------ISDKYSQMIEGKSVGDGNFQSFGYSIDGGMDMDGNSYPDMVVGSL-DDRIALIRARPVIHL 460
BLAST of Alpha-int-1 vs. Ensembl Medaka
Match: itga3b (integrin subunit alpha 3 [Source:NCBI gene;Acc:101157734]) HSP 1 Score: 112.849 bits (281), Expect = 9.115e-25 Identity = 137/477 (28.72%), Postives = 224/477 (46.96%), Query Frame = 3
Query: 318 SYFGYSIS---SFIGQKEAYCLVGAPRDEIDDESTNVNVNTGGVYR--ISFVNNDCSKVPMGSE-GSGHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDI-------SFLACS----VTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLD-TKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIM--RSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWL 1688
S FG+S++ +G ++ LVGAP+++ + +VN TG VY IS +DCS++ + ++ S + G WLG +V++ S G L C R+ + G +E+Q IG+C + + D S+ C+ + EG C + + V LG GS+ +GN+ + P + +L NR +GY + + VVT +P + S RG V++ + ++ +S + IP +GS FG+SLA D N D D+IVGAPFY + GA+YIF + + F+ VS + V KG G FG ++A +GD++ D DFAVG P TG VYI++G K ++ + S M + + + +FQ+FG+S+ G D+DGNS PD+++G +I ++R++ +I L
Sbjct: 39 SLFGFSVALHEQTVGSRQHLLLVGAPKEKANG-LKDVN-ETGAVYACPISTTFDDCSRMDLVTQPSSSEMVEGM--WLGVTVASQKGHSAGRVLMCGHRYAKIVTGG---TEEQRRMIGKCYVRSNDLTLDATDFWQTDSYEVCNPGYDMESEGQC-----NLGISGGIGYTDVYLGAVGSYTWQGNVHVIWRNPEPDNSWEANGKAFGELDNRNIYMGYSVL----------EEQKLLKQDQYTVVTGAPRFDS---RGSVILGEMSQAKISLMQLIP--GEQVGSYFGSSLAAADLNNDDWNDLIVGAPFYFERQNQIG-----GAVYIFMNE-NGSFQ-NVSTK--VLKGPAYSG-FGFAVAAIGDVNQDGFQDFAVGAP---FQETGRVYIWMGSKKG--------------ISDKYSQMIEGKSVGDGNFQSFGYSIDGGMDMDGNSYPDMVVGSL-DDRIALIRARPVIHL 460
BLAST of Alpha-int-1 vs. Ensembl Medaka
Match: itga9 (integrin subunit alpha 9 [Source:NCBI gene;Acc:101161001]) HSP 1 Score: 105.916 bits (263), Expect = 1.535e-22 Identity = 175/753 (23.24%), Postives = 320/753 (42.50%), Query Frame = 3
Query: 315 NSYFGYSISSFIGQKEAYCLVGAPRDEIDDESTNVNVNTGGVYRISFVNN---DCSKVPMG-----SEGSGHVSPGYFN--WLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTI-RDISFLACSV-------TDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSD-LKNRGYN-LGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGH-LGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNV-RGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNE--PDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQGL-----KGLNCTLRISEDTINVVALCQFPNPFVNNRNKIH 2486
+S+FGYS+ + +VGAPR + ++ + G VY+ +N C+++ +G E G G + W+G S++ + ++G L C R+ + V + + +L G C+I S R + C + G+C + ++ +E++ V +G PGS+ G I + N S SP + + + GY+ LGY + FS+ VV + + ++ GV V K++ S ++ +G +GS FG+SL D N D + D++VGAP ++ +L D G + ++ G+ + V ++ V G N FG SIA +GDID D D A+G P +D G+VYIY GG+ Q+ + + + + Q FG S++G D+DGN D+ +G + + +VVLRS+ +I ++ ++ LP S +I + +E P+ CF ++ + GR++ ++++ + D D K + R+ V S S I S + ++ V+ + + I + ++ +L KG K + F +C SD +C +D+R+ L S ++ + + I I N G++AY+ + + + + KG++C L + D + +C+ PF+ + K H
Sbjct: 46 SSFFGYSVLEHYHDNTRWVIVGAPR--ANSSYSSSVRSPGAVYKCRVHSNPERRCTEMDLGRGNKPRETCGKTCQGDRDDEWMGVSLARQ-DRADGKVLACAHRWKN-----VYYASEHILPHGYCAIIPPSLQGRTKPLIPCYEDHKQKYGEEHGSC----QAGIAGVFTEEL-VVMGAPGSYYWTGTIKVYNLTSDSFY-------SPRESIDSHGYSYLGYAVAAGH--------------FSSPNVVDIAA--GAPQHSGVGKVYIFKIEGSSLVKSFQATGKMMGSYFGSSLCAVDLNQDGLSDLLVGAPMHS-------QLRDEGQVSVYLGKGNG-----VMEEHAVLTGDNAFNAHFGESIAAIGDIDDDGYQDVAIGAPK-EDDYAGAVYIYHGGATGITQIYSMK-------------LSGRSLNPGLQMFGQSISGTVDMDGNGYSDVTVGAFMADSVVVLRSRPVITVDVSIF-LPVSINISLPQCHEGHPNLNCFN------ATVCLRFRGRQLPGQIELLYNLTADAD-KRQKSQPARVYFVQSGSQISQMSQQLSLDINREECQRYTAFVKKDVKDVFTAITFEVAYSLGRHALTGDPDQELPALTP---VLRWRKGNKIAVRNETWFEK-NCLSD-DCAADLRLHGKLLLSGMHVKAHLALGAVRNVSLNITISNAGDDAYDTNIHFNFSREVFYINFWQKEDKGISCAL-VDLDFL----VCRVGFPFMRAQTKYH 718
BLAST of Alpha-int-1 vs. Planmine SMEST
Match: SMESG000022733.1 (SMESG000022733.1) HSP 1 Score: 2165.58 bits (5610), Expect = 0.000e+0 Identity = 1145/1153 (99.31%), Postives = 1149/1153 (99.65%), Query Frame = 3
Query: 180 MEHCXXXXXXXXXXXXXXXKICSSDTFDNDIFLVGLSKLYLHSNVNSYFGYSISSFIGQKEAYCLVGAPRDEIDDESTNVNVNTGGVYRISFVNNDCSKVPMGSEGSGHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHVAPENLEGIYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIEDMMISTLPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHRQYKAEIIEDSNGHNGYVSRCNYSYNPVHL 3638
MEHCLLSILLLFNLLWNSLKICSSDTFDNDIFLVGLSKLYLHSNVNSYFGYSISSFIGQKEAYCLVGAPRDEIDDESTN NVNTGGVYRISFVNNDCSKVPMGSEGSGHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTDEGACLSGFSSSVSADDSEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPD+SGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDV KGVNVRGKFGMSIANLGDIDGDDIDDFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSS+ITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNISISYQPTSSSSNDNIEISNFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHV+PENLEGIYVDSRNFSSKISPLQRVYPETLGPPYQA FTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQ+ISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIE VVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIEDMMISTLPIWPIVLGALLGLILLTLIILMLWKCGFFQRHRQYKAEIIEDSNGHNGYVSRCNYSYNPVHL
Sbjct: 1 MEHCLLSILLLFNLLWNSLKICSSDTFDNDIFLVGLSKLYLHSNVNSYFGYSISSFIGQKEAYCLVGAPRDEIDDESTNGNVNTGGVYRISFVNNDCSKVPMGSEGSGHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTDEGACLSGFSSSVSADDSEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDMSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVLKGVNVRGKFGMSIANLGDIDGDDIDDFAVGCPNCGNDATGSVYIYLGGSKVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVSSKSSVITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNISISYQPTSSSSNDNIEISNFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWGENAYNVKLKITIPKVLEFQGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHVSPENLEGIYVDSRNFSSKISPLQRVYPETLGPPYQAAFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQIISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETIEKVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIEDMMISTLPIWPIVLGALLGLILLTLIILMLWKCGFFQRHRQYKAEIIEDSNGHNGYVSRCNYSYNPVHL 1153
BLAST of Alpha-int-1 vs. Planmine SMEST
Match: SMESG000018926.1 (SMESG000018926.1) HSP 1 Score: 121.709 bits (304), Expect = 1.698e-27 Identity = 226/996 (22.69%), Postives = 414/996 (41.57%), Query Frame = 3
Query: 681 TIRDISFLACSVTDEGACLXXXXXXXXXXXXE--KIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKN---RGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSPHWKSNEYRGVVLVLDTKLDLSQILYIPDLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDAT-GSVYIYLGGS-----KVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKNLIWLENPVWLLPTSKSIEWTKYNEPDKPCFG-DSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYKRLQLVS----------SKSSIITKYLNYSFSTLNSTVEIFSGLVEPRFEQIKLNIWQPLIVNIXXXXXXXXXXXXXXXXXXXFWMLHPFKGYKYFSSPISLFRNPDCGSDYNCVSDIRVFISDLSSSLYKTDIYYKEKYQIRQVVIGIGNWG-ENAYNVKLKITIPKVLEFQGLKGLNCTLRISEDTINVVALCQFPNPFVNNRNKIHKLYLTLNTGGAFRSYKNRKNKIGSSILTMKVEGTCENQDFDKSNNKGSIDYFLRLAGFVHVAPENLEGIYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRIS--QQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNL---NAIERNLKQNYRNKRSVETIENVVETKS------NPVKSASIVP--KIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIEDMMISTLPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHRQYK 3560
T+ I F S T C+ GFS + + +++ I++ +GMP + FG + +I+ K S +N + YN GY + L SN SSP S++Y V + L L+ IP S+FG +L K +++GAPF+ S K + ++G +YIF ++ S +D G FG +AN+GDI+GD D A+ P ND G V +Y + P Q+++ + + + FG ++ G D+D N PD+I+ S+ I + S+ L T+K I T N +P + D+ +SL + E + YID++ F K+L+++S ++ +IT+ + F + F+ + + + L I P+ + + N+ +L P ++ ++ I + + C + + C +DI ++L IY +K R + + I N+G + +IT + L + + T A C+ N ++ ++ ++ F +K+ I + + VE + D + +NN I+Y + ++ + + +DSRN S ++ QRV + +GP TF I N+G + + I + IS+P +T ILY +I Q G +S +P ++ GT C LP + ++PL + E +LK +K V+ + + + +S N +A+ +P K+ E + CN S C +I C I L + +++I A +A TFF K+SD +Y++I + I + + P + IF ++ ++ P+WPI++G ++G ++L ++I+ +KCGFF+R+++ +
Sbjct: 177 TLTSIEFCKLSATSYSTCMGGFSVDLMSMNNQVNGIEMLVGMPH---------MIPFGGVKIINNPFGKPIVSQPRNGLGKYYNFGYSVALT----------------SNSDGYVSSPL--SDQYGPNVTNIREDLQLTSPDNIP------FSSFGVTLTTLSIFKGKRYAVVIGAPFH-----SVKSIQNVGKVYIFCSSNKNR-----SAPSDFLHGKEKDEFFGYFLANIGDINGDGNQDLAISSPFLRNDEIKGFVALYTINENCEMKQTPYQILKSQKPKNAGI------------------FGIAITGGSDMDFNGWPDIIVSSTRSNSIEMYASRQLY----------TAKCIYSTDSNLEVQPLYMYDNITITLSL----------SLEDFLKNQYIDIN------FLKQLKVLSQVKINDNSQLNRFKLITEPITIEFDSATGISVTFTIMSLQNVKDMNLTI--PVTIGYRFVENCENRKCNN--------LLFPLINWEKCTTIIPI-KKYICSNIFICNADIA---AELVDRFGNEVIYGFDKSYHRTLELKIYNYGPTEGKGINFRITTFENLRINKISTTESNFKDLISTNQTKATCKLENYEIDANE-----FIAIDIDLYFIDFKDSSKMIYENNFVL-VELFSDVTDSNLTNNVAKINYIFIYEPNISLSASSKQDTVIDSRNRSQPMNLGQRVTIDIIGPRLSQTFIIDNIGKAVINNIVVRISVPLQTKENLYILYLFDKIRGVNQSQVG---WMSIVPH--AVVGTEKYPCSLPSEFVNPLKIIGFETHESHLKD--IDKTPVDGLLHFIRKRSANQPFINASANANKMPLGKMNRIPIESIECNRSGQALKLPICGDITCAIPFLPANKQARIQINAWLYAHTFFKKKISDLKVYSTISVDFTNIPKGVKLRFPSPVRPYSQFQQFIFNNLKLNIVHIKPLWPIIVGIVIGTLILAILIVAFYKCGFFKRNKRRR 1058
BLAST of Alpha-int-1 vs. Planmine SMEST
Match: SMESG000021746.1 (SMESG000021746.1) HSP 1 Score: 87.8113 bits (216), Expect = 4.083e-17 Identity = 79/312 (25.32%), Postives = 148/312 (47.44%), Query Frame = 3
Query: 2631 IDYFLRLAGFVHVAPENLEGIYVDSRNFSSKISPLQRVYPETLGPPYQATFTISNLGPSPLEKINLTISIPFKTSNGENILYFLKRISQQDSSGNPISISQLPQVISIKGTAHGNCRLPEDSIDPLNLNAIERNLKQNYRNKRSVETI--ENVVETKSNPVKSASIVPKIKTRYQEIVSCNNSKSGFGSVECINIHCDIFNLTLQSEIKVEIKARFWAETFFLYKVSDSVIYTSIFGNIHPISYVFNVSGDLKIYPLNISHNVIFKGIEDMMISTLPIWPXXXXXXXXXXXXXXXXXXXWKCGFFQRHRQYK 3560
++Y + + ++ +N + +DSR + L RV + LG ++ I N GP L+ + L P+K + ILY + +I S IS LP + + G C + ++ ++PLN+ A + + YR+KRS + N ++++ +S V ++ CN S G+ C + C + + SE + +A + +TFF ++ + T++ N+ + V + I P+ S NV+F ++ LP+WPI++ ++G+ LL +II++ + CGFF+R R K
Sbjct: 703 MEYKVLFKPKLMISSKNTKENNIDSRIKPPYLEKLHRVSVQDLGTELSYSYLIENKGPE-LKNVTLKFLFPYKIQPDKYILYLMDKIRLSTSVKEEIS---LPSINNKNGLVKY-CNVAKEMLNPLNVIAHDYKKSETYRSKRSANELNFSNKSVSQNDRSQSEGNVALSSLGRTSLIKCNESNPNLGAPICGEVICRLDVIPNNSEFNFDFRAWVFTKTFFDARIPHLTVMTTLQANLELPKGLSVVKENQIIGPIFASQNVLFNKMKVDEDKPLPLWPIIVAIIIGIFLLVIIIIIAYYCGFFKRKRLRK 1009 HSP 2 Score: 51.9878 bits (123), Expect = 3.189e-6 Identity = 56/220 (25.45%), Postives = 92/220 (41.82%), Query Frame = 3
Query: 1101 DLSGHLGSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYGQVSDKFKYTVSNQNDVFKGVNVRGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGS-----KVPVQVIRPRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGKFDIDGNSVPDLIIGDYSSSQIVVLRSKN-----LIWLENPVWLLPTSKSIE 1730
DL FG S+ + G+ + +++GAP + S + LV++GA+++ + K K T DV G N FG +IA LGDID + ++F VG P+ D G +YI+ K P+QV + + F FG +++ FD++ N PD + S + + N W+E + +S E
Sbjct: 282 DLKTQRYGGFGTSMDTVNLGGN-LYAVVIGAP-----YQSKQNLVNVGAVFL-----ACKGKPT-----DVIYGENAYDNFGYAIARLGDIDSNGSEEFVVGAPSLNLDKPGKIYIFKTTESCQIFKKPLQVYQSK----------------------FTGFGIAISRGFDVNFNGKPDFFVTSLGSQKPFLFVMPNQEKVTCTWIEPSTGFIINEQSFE 463
BLAST of Alpha-int-1 vs. Planmine SMEST
Match: SMESG000034289.1 (SMESG000034289.1) HSP 1 Score: 82.8037 bits (203), Expect = 1.278e-15 Identity = 149/585 (25.47%), Postives = 248/585 (42.39%), Query Frame = 3
Query: 279 VGLSKLYLHSNV---NSYFGYSISSFIGQKEA--YCLVGAPRDEIDDESTNVNVNTGGVYR--ISFVNNDCSKVPMGSEGSGHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSY-------------GVNKSEQQLLGIGQCSIYTGSTIRDISFLACSVTDEGACLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSP---HWKSNEYR---GVVLVLDTKLDLSQILYIPDLSGHL-GSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYG-QVSDKFKYTVSNQNDVFKGVNV-------RGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIR-PRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGK-FDIDGNSVPDLIIGDYSSSQIVVLRSKNLI--WLENPV----WLLPTS-KSIEWTKYNEPDKPC--FGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYK 1895
+ L+ Y+ SN S+FG+S++ F ++ + Y L+GAP D + D N TG ++ ++ DC K + +E S GY N G+ C P+FL +Y N+ EQ + C S ++ + C GA L E+ ++ L P S+ +G + NF S + LK R N Y + G R+P + S +V SP + S + G V++ KL + + Y+ + G + GS +G S+ D N D + +++VGAPF ++ G +++++ ++S + DV K + + G++G+S+ N+GDI+ D I D AVG P ND TG+VYIYLG S Q+I+ + + +++P + +G+S+ GK D+D N+ PD I+G S +V +R++ +I + EN V LP S S++ N + PC S YY ++T ID + +L+ PF K
Sbjct: 23 IDLNSPYIKSNFINNKSFFGFSLNIFTSKQNSIKYFLIGAPFDILKDS----NETTGALFSCPVTKETQDCKKF-VFTEHSNESLLGYV--------VDSNSHEGLIYTCAPKFLRSHTYVKYVEGACWEFNDMFNEVEQ--ISNQDCLESIKSESQNYEYRNCLT---GAALKSL---------ERKQLVLTAPYSYEGKGLLINNNFYSREN------SRSSNYLKFRNSNSKYQYTGFSMAVGKIFRNPNVKS-----IVLGSPGISQYDSTRTQIKFGQVVI--GKLIENSLEYVGVIFGEVFGSGYGYSVLAMDLNNDGMDELVVGAPFTNNNN---------GQVFVYWNIEMSQSNIEHKTIPLDVEKRLLLTSMKKLSNGQYGISLENIGDINKDFIQDLAVGAP-FENDGTGAVYIYLGDSH---QIIKLSQKIEGQMISPD------------LRGYGFSIFGKNEDLDSNTYPDFIVGSVLSGHVVGMRTRPIIRVYAENMVAATDMQLPYSFDSLKKCNSNGQEMPCIKLSVSIHYYYP--------DLTTCPSYASSKTIDYEIELDMPFIK 534
BLAST of Alpha-int-1 vs. Planmine SMEST
Match: SMESG000034289.1 (SMESG000034289.1) HSP 1 Score: 82.8037 bits (203), Expect = 1.396e-15 Identity = 152/582 (26.12%), Postives = 252/582 (43.30%), Query Frame = 3
Query: 279 VGLSKLYLHSNV---NSYFGYSISSFIGQKEA--YCLVGAPRDEIDDESTNVNVNTGGVYR--ISFVNNDCSKVPMGSEGSGHVSPGYFNWLGGSVSTTVNGSNGVQLGCDPRFLSKTSYGVNKSEQQLLGIGQCSIYTG--STIRDISFLAC--SVTDEGA------CLXXXXXXXXXXXXEKIKVALGMPGSFLTEGNIFLANFGPMSMIDKVLLKTSPSDLKNRGYNLGYDIKLARLWYGPKGRSPFINSFSNEVVVTSSP---HWKSNEYR---GVVLVLDTKLDLSQILYIPDLSGHL-GSNFGNSLAVGDFNGDKILDIIVGAPFYTDHWTSSKRLVDIGAIYIFYG-QVSDKFKYTVSNQNDVFKGVNV-------RGKFGMSIANLXXXXXXXXXXFAVGCPNCGNDATGSVYIYLGGSKVPVQVIR-PRNLNHVLVTPQCSYMDDKEIMRSFQNFGWSLAGK-FDIDGNSVPDLIIGDYSSSQIVVLRSKNLI--WLENPV----WLLPTS-KSIEWTKYNEPDKPC--FGDSCRYYMSLKAKVAGRKISTSEKIIFRVYIDLDTKLEHPFYK 1895
+ L+ Y+ SN S+FG+S++ F ++ + Y L+GAP D + D N TG ++ ++ DC K + +E S GY N G+ C P+FL +Y V E G C + + + IS C S+ E CL+G + E+ ++ L P S+ +G + NF S + LK R N Y + G R+P + S +V SP + S + G V++ KL + + Y+ + G + GS +G S+ D N D + +++VGAPF ++ G +++++ ++S + DV K + + G++G+S+ N+GDI+ D I D AVG P ND TG+VYIYLG S Q+I+ + + +++P + +G+S+ GK D+D N+ PD I+G S +V +R++ +I + EN V LP S S++ N + PC S YY ++T ID + +L+ PF K
Sbjct: 23 IDLNSPYIKSNFINNKSFFGFSLNIFTSKQNSIKYFLIGAPFDILKDS----NETTGALFSCPVTKETQDCKKF-VFTEHSNESLLGYV--------VDSNSHEGLIYTCAPKFLRSHTY-VKYVE------GACWEFNDMFNEVEQISNQDCLESIKSESQNYEYRNCLTGAALKSL----ERKQLVLTAPYSYEGKGLLINNNFYSREN------SRSSNYLKFRNSNSKYQYTGFSMAVGKIFRNPNVKS-----IVLGSPGISQYDSTRTQIKFGQVVI--GKLIENSLEYVGVIFGEVFGSGYGYSVLAMDLNNDGMDELVVGAPFTNNNN---------GQVFVYWNIEMSQSNIEHKTIPLDVEKRLLLTSMKKLSNGQYGISLENIGDINKDFIQDLAVGAP-FENDGTGAVYIYLGDSH---QIIKLSQKIEGQMISPD------------LRGYGFSIFGKNEDLDSNTYPDFIVGSVLSGHVVGMRTRPIIRVYAENMVAATDMQLPYSFDSLKKCNSNGQEMPCIKLSVSIHYYYP--------DLTTCPSYASSKTIDYEIELDMPFIK 534 The following BLAST results are available for this feature:
BLAST of Alpha-int-1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Alpha-int-1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of Alpha-int-1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Alpha-int-1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Alpha-int-1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Alpha-int-1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Alpha-int-1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Alpha-int-1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Alpha-int-1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Alpha-int-1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Alpha-int-1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Alpha-int-1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of Alpha-int-1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Alpha-int-1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30017880 ID=SMED30017880|Name=Alpha-int-1|organism=Schmidtea mediterranea sexual|type=transcript|length=3694bpback to top protein sequence of SMED30017880-orf-1 >SMED30017880-orf-1 ID=SMED30017880-orf-1|Name=SMED30017880-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1154bp MEHCLLSILLLFNLLWNSLKICSSDTFDNDIFLVGLSKLYLHSNVNSYFGback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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