Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30017706 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 2
Homology
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Match: LITAF (lipopolysaccharide induced TNF factor [Source:HGNC Symbol;Acc:HGNC:16841]) HSP 1 Score: 84.7297 bits (208), Expect = 2.483e-20 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F P+ M CP CN IV+ + Y+ G LT+L C +GC+ GCC IPF V +DV HYCP C ALLG Y+R+ Sbjct: 87 FLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKRL 161
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Match: LITAF (lipopolysaccharide induced TNF factor [Source:HGNC Symbol;Acc:HGNC:16841]) HSP 1 Score: 84.7297 bits (208), Expect = 2.483e-20 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F P+ M CP CN IV+ + Y+ G LT+L C +GC+ GCC IPF V +DV HYCP C ALLG Y+R+ Sbjct: 87 FLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKRL 161
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Match: LITAF (lipopolysaccharide induced TNF factor [Source:HGNC Symbol;Acc:HGNC:16841]) HSP 1 Score: 84.7297 bits (208), Expect = 2.483e-20 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F P+ M CP CN IV+ + Y+ G LT+L C +GC+ GCC IPF V +DV HYCP C ALLG Y+R+ Sbjct: 87 FLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKRL 161
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Match: LITAF (lipopolysaccharide induced TNF factor [Source:HGNC Symbol;Acc:HGNC:16841]) HSP 1 Score: 84.7297 bits (208), Expect = 2.483e-20 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F P+ M CP CN IV+ + Y+ G LT+L C +GC+ GCC IPF V +DV HYCP C ALLG Y+R+ Sbjct: 87 FLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKRL 161
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Match: LITAF (lipopolysaccharide induced TNF factor [Source:HGNC Symbol;Acc:HGNC:16841]) HSP 1 Score: 84.7297 bits (208), Expect = 2.483e-20 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F P+ M CP CN IV+ + Y+ G LT+L C +GC+ GCC IPF V +DV HYCP C ALLG Y+R+ Sbjct: 87 FLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKRL 161
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Match: Y87G2A.18 (pep chromosome:WBcel235:I:13512384:13514320:-1 gene:WBGene00013604.1 transcript:Y87G2A.18.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y87G2A.18) HSP 1 Score: 65.0846 bits (157), Expect = 1.058e-13 Identity = 36/107 (33.64%), Postives = 52/107 (48.60%), Query Frame = 2 Query: 110 LMDPAKNAPP-------RYGPAAVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCV------CGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 + D +NAP RY + + MP+ M CPHC + IV+ + G L +++ I F+G C CC +PFF+ Q DV H CP C LG + R+ Sbjct: 13 MEDVEQNAPEPNPQNDSRYITSRTSPYNVMPIEMDCPHCQNHIVSHIERVAGVLPWIIFAILAFLGIFLFIIPWCFCC-VPFFLDQLLDVNHSCPACKKFLGRFNRV 118
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Match: Y87G2A.18 (pep chromosome:WBcel235:I:13512313:13514290:-1 gene:WBGene00013604.1 transcript:Y87G2A.18.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y87G2A.18) HSP 1 Score: 65.0846 bits (157), Expect = 1.058e-13 Identity = 36/107 (33.64%), Postives = 52/107 (48.60%), Query Frame = 2 Query: 110 LMDPAKNAPP-------RYGPAAVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCV------CGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 + D +NAP RY + + MP+ M CPHC + IV+ + G L +++ I F+G C CC +PFF+ Q DV H CP C LG + R+ Sbjct: 13 MEDVEQNAPEPNPQNDSRYITSRTSPYNVMPIEMDCPHCQNHIVSHIERVAGVLPWIIFAILAFLGIFLFIIPWCFCC-VPFFLDQLLDVNHSCPACKKFLGRFNRV 118
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Match: Y87G2A.19 (pep chromosome:WBcel235:I:13508785:13512026:1 gene:WBGene00044260.1 transcript:Y87G2A.19.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y87G2A.19) HSP 1 Score: 55.8398 bits (133), Expect = 2.213e-10 Identity = 30/82 (36.59%), Postives = 40/82 (48.78%), Query Frame = 2 Query: 155 AVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCV---CGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 A Y P + CP C T +R+ NG T++ FI G +PF V+ FKD +HYCP C A +G YRR+ Sbjct: 25 AKKYLSDRPQLLDCPRCKVHGETELRFVNGFFTYVSFFIILIFGFAILPLFFLWVPFCVETFKDAEHYCPSCRAWIGTYRRL 106
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Match: Y87G2A.19 (pep chromosome:WBcel235:I:13508814:13512026:1 gene:WBGene00044260.1 transcript:Y87G2A.19.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y87G2A.19) HSP 1 Score: 55.8398 bits (133), Expect = 2.213e-10 Identity = 30/82 (36.59%), Postives = 40/82 (48.78%), Query Frame = 2 Query: 155 AVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCV---CGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 A Y P + CP C T +R+ NG T++ FI G +PF V+ FKD +HYCP C A +G YRR+ Sbjct: 25 AKKYLSDRPQLLDCPRCKVHGETELRFVNGFFTYVSFFIILIFGFAILPLFFLWVPFCVETFKDAEHYCPSCRAWIGTYRRL 106
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Match: F36G3.3 (pep chromosome:WBcel235:X:9798839:9801038:1 gene:WBGene00009484.1 transcript:F36G3.3.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F36G3.3) HSP 1 Score: 55.0694 bits (131), Expect = 1.063e-9 Identity = 27/70 (38.57%), Postives = 39/70 (55.71%), Query Frame = 2 Query: 182 VSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 + CP+C IVT + G LT++ GC C CC +PF ++ KD+ H CP C A++G +RRI Sbjct: 80 TKLQCPYCRMDIVTRTKSVYGLLTWIFFAALFLFGCWC-CCFLPFCLRSCKDIIHTCPNCRAMIGVHRRI 148
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Match: CG32280 (gene:FBgn0052280 transcript:FBtr0073031) HSP 1 Score: 69.3218 bits (168), Expect = 4.320e-15 Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 2 Query: 188 MVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388 M+CP C++ I TT R + G + +L F+ GC GCCLIP + DV H CP C A LG YRR Sbjct: 64 MICPSCHAEIETTTRTEPGMIAYLSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRYRR 130
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Match: CG32280 (gene:FBgn0052280 transcript:FBtr0073030) HSP 1 Score: 69.3218 bits (168), Expect = 4.320e-15 Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 2 Query: 188 MVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388 M+CP C++ I TT R + G + +L F+ GC GCCLIP + DV H CP C A LG YRR Sbjct: 64 MICPSCHAEIETTTRTEPGMIAYLSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRYRR 130
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Match: CG32280 (gene:FBgn0052280 transcript:FBtr0344220) HSP 1 Score: 69.3218 bits (168), Expect = 4.320e-15 Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 2 Query: 188 MVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388 M+CP C++ I TT R + G + +L F+ GC GCCLIP + DV H CP C A LG YRR Sbjct: 64 MICPSCHAEIETTTRTEPGMIAYLSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRYRR 130
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Match: CG32280 (gene:FBgn0052280 transcript:FBtr0073032) HSP 1 Score: 69.3218 bits (168), Expect = 4.320e-15 Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 2 Query: 188 MVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388 M+CP C++ I TT R + G + +L F+ GC GCCLIP + DV H CP C A LG YRR Sbjct: 64 MICPSCHAEIETTTRTEPGMIAYLSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRYRR 130
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Match: CG4250 (gene:FBgn0034761 transcript:FBtr0309802) HSP 1 Score: 53.9138 bits (128), Expect = 2.452e-9 Identity = 30/89 (33.71%), Postives = 39/89 (43.82%), Query Frame = 2 Query: 122 AKNAPPRYGPAAVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388 NAPP G P CP C T V ++ T T LLA + C +G +C CC IP+ + KH C C A +G Y+ Sbjct: 54 GNNAPPNV-------LGQCPSVATCPSCGVRRETKVEFEPSTKTHLLALLICMLGGIC-CCCIPYCTDSCQSAKHTCTSCGAYVGTYKN 134
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Match: litaf (lipopolysaccharide-induced TNF factor [Source:NCBI gene;Acc:431731]) HSP 1 Score: 75.0998 bits (183), Expect = 7.709e-17 Identity = 31/74 (41.89%), Postives = 48/74 (64.86%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388 FG +PV CP C+ +++T + Y +G L +L GC+ GCCLIPF ++ KDV H+CP C+++LG ++R Sbjct: 89 FGNVPVQAHCPVCSQSVITRLEYSSGPLVWLSCAGLAVFGCIYGCCLIPFCIEDLKDVTHHCPNCSSVLGVHKR 162
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Match: si:dkeyp-75b4.8 (si:dkeyp-75b4.8 [Source:ZFIN;Acc:ZDB-GENE-090313-395]) HSP 1 Score: 74.3294 bits (181), Expect = 3.088e-16 Identity = 33/80 (41.25%), Postives = 47/80 (58.75%), Query Frame = 2 Query: 149 PAAVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388 P P S+VC +C+ +IVT V Y G +++L+ + F+G +CGCC+IPFFV+ F D H CP C +G Y R Sbjct: 114 PQQSTTLDDTPASIVCRYCHQSIVTHVEYKPGVISWLMCVVISFLGGICGCCVIPFFVRGFLDAHHSCPLCKRHIGIYTR 193
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Match: cdip1 (cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]) HSP 1 Score: 72.0182 bits (175), Expect = 2.491e-15 Identity = 32/75 (42.67%), Postives = 42/75 (56.00%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F + PV VCPHC I+T + +D G + L+ F+GC GCCLIP + KDV H CP C + Y+RI Sbjct: 138 FQSAPVQTVCPHCQQPIITRISHDIGLMNTLVCMFCFFVGCDLGCCLIPCLIDDLKDVTHTCPNCKGYIYTYKRI 212
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Match: cdip1 (cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]) HSP 1 Score: 72.0182 bits (175), Expect = 2.491e-15 Identity = 32/75 (42.67%), Postives = 42/75 (56.00%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F + PV VCPHC I+T + +D G + L+ F+GC GCCLIP + KDV H CP C + Y+RI Sbjct: 138 FQSAPVQTVCPHCQQPIITRISHDIGLMNTLVCMFCFFVGCDLGCCLIPCLIDDLKDVTHTCPNCKGYIYTYKRI 212
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Match: si:ch211-157c3.4 (si:ch211-157c3.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8454]) HSP 1 Score: 66.2402 bits (160), Expect = 1.229e-13 Identity = 33/88 (37.50%), Postives = 43/88 (48.86%), Query Frame = 2 Query: 110 LMDPAKNAPPRYGPAAVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALL 373 + + A +Y G P C C ++T V Y G +L+ + F G V GCCLIPFF+K FKD H CPRCN +L Sbjct: 53 VQSQSTEARNKYVSYESYELGRKPAMATCTSCQQQVLTNVTYKVGVYAWLMCILIFFCGFVLGCCLIPFFMKFFKDAYHSCPRCNKIL 140
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Match: aff2 (AF4/FMR2 family member 2 [Source:Xenbase;Acc:XB-GENE-952102]) HSP 1 Score: 85.1149 bits (209), Expect = 3.084e-20 Identity = 38/71 (53.52%), Postives = 46/71 (64.79%), Query Frame = 2 Query: 179 PVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 PV M C CNS I T + Y +G L +L C +GC+ GCCLIPF + KDV HYCP C+ALLG Y+RI Sbjct: 118 PVQMCCRSCNSMITTRLEYSSGALAWLSCGGLCLLGCIGGCCLIPFCIDSLKDVDHYCPNCHALLGSYKRI 188
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Match: pfkfb4 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:Xenbase;Acc:XB-GENE-1001570]) HSP 1 Score: 79.337 bits (194), Expect = 2.840e-18 Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F PV+ CP+CN I+T ++Y G +++L + F GC GCC+IPF + + KDV HYCP CN LL +Y+R+ Sbjct: 98 FQDTPVTATCPNCNQRIITRLQYSVGLFSWILFAVFMFFGCWLGCCIIPFVMDRCKDVDHYCPSCNYLLHKYKRM 172
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Match: pfkfb4 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:Xenbase;Acc:XB-GENE-1001570]) HSP 1 Score: 79.337 bits (194), Expect = 3.057e-18 Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F PV+ CP+CN I+T ++Y G +++L + F GC GCC+IPF + + KDV HYCP CN LL +Y+R+ Sbjct: 98 FQDTPVTATCPNCNQRIITRLQYSVGLFSWILFAVFMFFGCWLGCCIIPFVMDRCKDVDHYCPSCNYLLHKYKRM 172
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Match: pfkfb4 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:Xenbase;Acc:XB-GENE-1001570]) HSP 1 Score: 79.7221 bits (195), Expect = 3.211e-18 Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F PV+ CP+CN I+T ++Y G +++L + F GC GCC+IPF + + KDV HYCP CN LL +Y+R+ Sbjct: 109 FQDTPVTATCPNCNQRIITRLQYSVGLFSWILFAVFMFFGCWLGCCIIPFVMDRCKDVDHYCPSCNYLLHKYKRM 183
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Match: pfkfb4 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:Xenbase;Acc:XB-GENE-1001570]) HSP 1 Score: 79.337 bits (194), Expect = 3.223e-18 Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F PV+ CP+CN I+T ++Y G +++L + F GC GCC+IPF + + KDV HYCP CN LL +Y+R+ Sbjct: 98 FQDTPVTATCPNCNQRIITRLQYSVGLFSWILFAVFMFFGCWLGCCIIPFVMDRCKDVDHYCPSCNYLLHKYKRM 172
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Match: Litaf (LPS-induced TN factor [Source:MGI Symbol;Acc:MGI:1929512]) HSP 1 Score: 85.5001 bits (210), Expect = 8.366e-21 Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F PV M CP C+ IVT + Y+ G LT+L C +GCV GCC IPF V +DV HYCP C ALLG Y+R+ Sbjct: 87 FYDRPVQMCCPSCSKMIVTQLSYNAGALTWLSCGSLCLLGCVAGCCFIPFCVDALQDVDHYCPNCKALLGTYKRL 161
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Match: Litaf (LPS-induced TN factor [Source:MGI Symbol;Acc:MGI:1929512]) HSP 1 Score: 85.5001 bits (210), Expect = 8.366e-21 Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F PV M CP C+ IVT + Y+ G LT+L C +GCV GCC IPF V +DV HYCP C ALLG Y+R+ Sbjct: 87 FYDRPVQMCCPSCSKMIVTQLSYNAGALTWLSCGSLCLLGCVAGCCFIPFCVDALQDVDHYCPNCKALLGTYKRL 161
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Match: Cdip1 (cell death inducing Trp53 target 1 [Source:MGI Symbol;Acc:MGI:1913876]) HSP 1 Score: 82.8037 bits (203), Expect = 2.054e-19 Identity = 36/75 (48.00%), Postives = 45/75 (60.00%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F PV VCPHC I T + Y+ G + F+L F CF+GC GCCLIP + FKDV H CP C A + Y+R+ Sbjct: 116 FEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYICTYKRL 190
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Match: Cdip1 (cell death inducing Trp53 target 1 [Source:MGI Symbol;Acc:MGI:1913876]) HSP 1 Score: 82.4185 bits (202), Expect = 3.069e-19 Identity = 36/75 (48.00%), Postives = 45/75 (60.00%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F PV VCPHC I T + Y+ G + F+L F CF+GC GCCLIP + FKDV H CP C A + Y+R+ Sbjct: 133 FEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYICTYKRL 207
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Match: Cdip1 (cell death inducing Trp53 target 1 [Source:MGI Symbol;Acc:MGI:1913876]) HSP 1 Score: 82.4185 bits (202), Expect = 3.069e-19 Identity = 36/75 (48.00%), Postives = 45/75 (60.00%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F PV VCPHC I T + Y+ G + F+L F CF+GC GCCLIP + FKDV H CP C A + Y+R+ Sbjct: 133 FEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYICTYKRL 207
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Match: sp|P0C0T0|LITAF_RAT (Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog OS=Rattus norvegicus OX=10116 GN=Litaf PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.704e-20 Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F P+ M CP CN IVT + Y+ G LT+L C +GCV GCC IPF V +DV HYCP C ALLG Y+R+ Sbjct: 87 FYDRPIQMCCPSCNKMIVTQLSYNAGALTWLSCGSLCLLGCVAGCCFIPFCVDALQDVDHYCPNCKALLGTYKRL 161
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Match: sp|Q9JLJ0|LITAF_MOUSE (Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog OS=Mus musculus OX=10090 GN=Litaf PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 5.852e-20 Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F PV M CP C+ IVT + Y+ G LT+L C +GCV GCC IPF V +DV HYCP C ALLG Y+R+ Sbjct: 87 FYDRPVQMCCPSCSKMIVTQLSYNAGALTWLSCGSLCLLGCVAGCCFIPFCVDALQDVDHYCPNCKALLGTYKRL 161
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Match: sp|Q6P828|LITAF_XENTR (Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog OS=Xenopus tropicalis OX=8364 GN=litaf PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.051e-19 Identity = 38/71 (53.52%), Postives = 46/71 (64.79%), Query Frame = 2 Query: 179 PVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 PV M C CNS I T + Y +G L +L C +GC+ GCCLIPF + KDV HYCP C+ALLG Y+RI Sbjct: 78 PVQMCCRSCNSMITTRLEYSSGALAWLSCGGLCLLGCIGGCCLIPFCIDSLKDVDHYCPNCHALLGSYKRI 148
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Match: sp|Q99732|LITAF_HUMAN (Lipopolysaccharide-induced tumor necrosis factor-alpha factor OS=Homo sapiens OX=9606 GN=LITAF PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.193e-19 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F P+ M CP CN IV+ + Y+ G LT+L C +GC+ GCC IPF V +DV HYCP C ALLG Y+R+ Sbjct: 87 FLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKRL 161
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Match: sp|Q8QGW7|LITAF_CHICK (Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog OS=Gallus gallus OX=9031 GN=LITAF PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 6.342e-19 Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F PV M CP CN IVT + Y++G LT+L +GC+ GCCLIPF V KDV+H+CP CNA +G Y+R+ Sbjct: 74 FYDRPVQMSCPSCNQMIVTRLCYESGALTWLSCGGLFLLGCIAGCCLIPFCVDALKDVEHFCPNCNAHVGSYKRL 148
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Match: T1FXV4 (LITAF domain-containing protein OS=Helobdella robusta OX=6412 GN=20213652 PE=4 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.096e-20 Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = 2 Query: 179 PVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 P + CP+CN+ ++T+ Y NG LT++L F+ F GC+ GCCLIPFFVK KDV H CP+CN ++GE++RI Sbjct: 7 PYNTTCPNCNANVLTSAEYKNGALTWVLCFVLAFFGCILGCCLIPFFVKATKDVVHRCPQCNMVVGEHKRI 77
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Match: A0A3M6UJR4 (LITAF domain-containing protein OS=Pocillopora damicornis OX=46731 GN=pdam_00000257 PE=4 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.272e-20 Identity = 43/75 (57.33%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 FG PVSMVCPHC + I+T Y +GTLT+L A C +GC GCCLIPF + KDV H CP C+A LG YRR+ Sbjct: 70 FGESPVSMVCPHCQTHIITCTTYQDGTLTWLSAGALCLLGCWLGCCLIPFCLDGCKDVIHSCPNCHARLGSYRRM 144
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Match: A0A3L8SHM5 (LITAF domain-containing protein OS=Chloebia gouldiae OX=44316 GN=DV515_00007974 PE=4 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.050e-19 Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F PV M CP CN IVT + YD+G LT+L C +GC+ GCCLIPF + KDV H CP+CNAL+G Y+R+ Sbjct: 73 FYDRPVQMCCPSCNQMIVTRLSYDSGALTWLSCGGLCLLGCIAGCCLIPFCIDALKDVDHTCPKCNALVGSYKRL 147
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Match: H0Z381 (Lipopolysaccharide induced TNF factor OS=Taeniopygia guttata OX=59729 GN=LITAF PE=4 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.131e-19 Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F PV M CP CN IVT + YD+G LT+L C +GC+ GCCLIPF + KDV H CP+CNAL+G Y+R+ Sbjct: 73 FYDRPVQMCCPSCNQMIVTRLSYDSGALTWLSCGGLCLLGCIAGCCLIPFCIDALKDVDHTCPKCNALVGSYKRL 147
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Match: A0A093QYC4 (Lipopolysaccharide-induced tumor necrosis factor-alpha factor OS=Phalacrocorax carbo OX=9209 GN=N336_03629 PE=4 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.811e-19 Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 2 Query: 179 PVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 PV M CP CN IVT + YD+G LT+L C +GCV GCCLIPF + KDV H CP CNAL+G Y+R+ Sbjct: 77 PVQMCCPSCNQMIVTRLSYDSGALTWLSCGGLCLLGCVAGCCLIPFCIDALKDVDHTCPNCNALIGSYKRL 147
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Match: litaf (lipopolysaccharide-induced TNF factor [Source:NCBI gene;Acc:431731]) HSP 1 Score: 78.1814 bits (191), Expect = 3.075e-18 Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 FG PV + CP+C T+VT + Y +GT+T+L GC+ GCCLIPF V KDV H+CP C+++LG ++R+ Sbjct: 78 FGHTPVQVHCPNCAQTVVTRLDYSSGTMTWLTCAGLFIFGCIYGCCLIPFCVDSLKDVTHHCPNCSSVLGVFKRL 152
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Match: cdip1 (cell death inducing p53 target 1 [Source:NCBI gene;Acc:103033134]) HSP 1 Score: 72.4034 bits (176), Expect = 1.932e-15 Identity = 32/75 (42.67%), Postives = 41/75 (54.67%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F + PV VCPHC I+T + +D G + L F+GC GCCLIP + KDV H CP C + Y+RI Sbjct: 137 FQSAPVQTVCPHCQQAIITRISHDVGLMNTLFCLFCFFVGCDLGCCLIPCLIDDLKDVTHTCPNCKGYIYTYKRI 211
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Match: si:ch211-157c3.4 (lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog [Source:NCBI gene;Acc:103024010]) HSP 1 Score: 67.781 bits (164), Expect = 2.142e-14 Identity = 36/86 (41.86%), Postives = 43/86 (50.00%), Query Frame = 2 Query: 116 DPAKNAPPRYGPAAVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALL 373 D AKN Y G P + C C ++T V Y G +L+ + G V GCCLIPFFVK FKD H CPRCN +L Sbjct: 54 DNAKNKYVSYDSE----LGRSPGTTTCTSCREQVLTNVTYKVGAFAWLMCILFILCGLVIGCCLIPFFVKYFKDAYHTCPRCNRIL 135
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Match: ENSAMXT00000041239.1 (pep primary_assembly:Astyanax_mexicanus-2.0:12:195968:202131:-1 gene:ENSAMXG00000040302.1 transcript:ENSAMXT00000041239.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 66.2402 bits (160), Expect = 6.375e-14 Identity = 35/76 (46.05%), Postives = 45/76 (59.21%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLL-AFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F PV + CP C T VT V+Y G LT+L + CF+GC CLIPF V + +D KH C C A+LG Y+R+ Sbjct: 50 FTDSPVQVTCPTCRHTAVTQVQYTPGLLTYLFCGGLLCFLGC----CLIPFCVDRLRDAKHVCSNCKAVLGVYKRL 121
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Match: ENSAMXT00000036300.1 (lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog [Source:NCBI gene;Acc:111193504]) HSP 1 Score: 54.6842 bits (130), Expect = 1.296e-9 Identity = 38/102 (37.25%), Postives = 53/102 (51.96%), Query Frame = 2 Query: 116 DPA--KNAPP----RYGPAAV--PYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLL--AFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 +PA ++APP + GPA V P+ G P M C +C IVT + G LT+ + + C I CLIPF KDV+H CP C+ +L Y+R+ Sbjct: 34 EPAVIQSAPPITVVQTGPAVVVQPHLGESPGRMKCMYCQQEIVTVTKPVTGILTWTIFGVLLACLIW---PFCLIPFCCAPCKDVEHTCPYCHNILSVYKRM 132
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Nematostella
Match: EDO33373 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSF9]) HSP 1 Score: 79.7221 bits (195), Expect = 7.655e-20 Identity = 40/75 (53.33%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F PVSM CP C++TIVT Y GTLT+L F C IGC GCC IPF V KDV H CP C + +G +RR+ Sbjct: 29 FYETPVSMNCPTCHATIVTATDYVTGTLTWLACFGLCIIGCDLGCCFIPFCVDSMKDVVHTCPNCRSQVGVFRRM 103
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Nematostella
Match: EDO37753 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SES1]) HSP 1 Score: 67.3958 bits (163), Expect = 1.687e-15 Identity = 35/68 (51.47%), Postives = 41/68 (60.29%), Query Frame = 2 Query: 188 MVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 MVC C + IVT Y G LT+LL+ C +G GCCLIPF + KDV H CP C A LG YRR+ Sbjct: 1 MVCSFCQTHIVTATTYRYGALTWLLSGGICLLGGWLGCCLIPFCLDGCKDVIHTCPNCQAQLGVYRRL 68
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Nematostella
Match: EDO37779 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SEW4]) HSP 1 Score: 66.2402 bits (160), Expect = 8.635e-14 Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 2 Query: 194 CPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388 C C + ++T VR+ G +T ++ + +GCV GCCL+PF +K +DV H CP C LG+YRR Sbjct: 91 CGSCMNHMMTVVRFRIGRMTVAVSALVFMLGCVAGCCLVPFIIKGLRDVIHSCPNCQITLGKYRR 155
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Nematostella
Match: EDO42963 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S062]) HSP 1 Score: 60.4622 bits (145), Expect = 2.286e-12 Identity = 32/76 (42.11%), Postives = 42/76 (55.26%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFIT-CFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 FG P SMVCP+C +TIVT Y GT +L+ + CF CC +PF + KDV H CP C +G + R+ Sbjct: 33 FGESPTSMVCPYCQATIVTATSYVPGTCAWLICLVIFCFFW---PCCFLPFVLDGCKDVVHSCPNCQRQVGVFTRL 105
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Match: ENSORLT00000037533.1 (pep primary_assembly:ASM223467v1:1:23682164:23683902:-1 gene:ENSORLG00000026577.1 transcript:ENSORLT00000037533.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 74.3294 bits (181), Expect = 3.411e-17 Identity = 38/83 (45.78%), Postives = 49/83 (59.04%), Query Frame = 2 Query: 143 YGPAAVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 Y AV G PV + CP C+ T+++ V + G LT+LL F G V GCCLIPF V + KD KH CP C +LG Y+R+ Sbjct: 24 YMLVAVRPLGANPVQIACPKCHRTVLSKVDHSAGLLTYLLCGGLFFCGFVLGCCLIPFCVDRVKDAKHSCPSCKTILGVYKRL 106
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Match: cdip1 (cell death inducing p53 target 1 [Source:NCBI gene;Acc:101173632]) HSP 1 Score: 72.7886 bits (177), Expect = 1.224e-15 Identity = 34/75 (45.33%), Postives = 41/75 (54.67%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 F T PV VCPHC IVT + +D G + L F+GC GCCLIP + KDV H CP C + Y+RI Sbjct: 130 FQTSPVQTVCPHCQQAIVTRISHDVGLMNTLFCLFCFFVGCDLGCCLIPCLIDDLKDVTHTCPYCKGYIYTYKRI 204
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Match: ENSORLT00000040558.1 (cell death-inducing p53-target protein 1-like [Source:NCBI gene;Acc:101164847]) HSP 1 Score: 70.4774 bits (171), Expect = 1.443e-14 Identity = 32/69 (46.38%), Postives = 41/69 (59.42%), Query Frame = 2 Query: 158 VPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCN 364 V G P + CP C + IVT R+ G + L+ F+ +GCV GCCLIPFF +FK+V H CPRC Sbjct: 163 VESLGHKPATTKCPSCQAVIVTQTRFKVGLSSCLVCFVCSTLGCVAGCCLIPFFTNRFKNVLHSCPRCQ 231
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Match: si:ch211-202h22.9 (si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1143]) HSP 1 Score: 68.1662 bits (165), Expect = 4.808e-14 Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 2 Query: 161 PYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 P+ P M+CPHC +T+VT + G T+L+ + IGC CCLIPF V KDV+H CP CN +L +RR+ Sbjct: 113 PHPTDCPGQMLCPHCQNTVVTKTEHKVGMQTWLIFGVLGIIGCW-PCCLIPFCVNSCKDVQHSCPSCNNVLHVHRRM 188
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Match: ENSORLT00000033265.1 (pep primary_assembly:ASM223467v1:8:8133676:8134078:-1 gene:ENSORLG00000030072.1 transcript:ENSORLT00000033265.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 62.3882 bits (150), Expect = 1.155e-12 Identity = 25/71 (35.21%), Postives = 39/71 (54.93%), Query Frame = 2 Query: 179 PVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 P CP C +VT ++T+L+ +T +GCV GCCLIPF +FK + H CP+C + +++ Sbjct: 32 PSRTQCPQCQQFVVTETSTSISSVTWLVCVMTALLGCVAGCCLIPFCSNKFKSITHRCPKCRTSIATLKKL 102
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Match: SMESG000079265.1 (SMESG000079265.1) HSP 1 Score: 149.058 bits (375), Expect = 6.085e-47 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 2 Query: 176 MPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 MPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI Sbjct: 1 MPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 72
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Match: SMESG000079265.1 (SMESG000079265.1) HSP 1 Score: 141.354 bits (355), Expect = 6.475e-44 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 2 Query: 188 MVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 MVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI Sbjct: 1 MVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 68
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Match: SMESG000020853.1 (SMESG000020853.1) HSP 1 Score: 82.0333 bits (201), Expect = 5.322e-20 Identity = 42/75 (56.00%), Postives = 52/75 (69.33%), Query Frame = 2 Query: 167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 +G +PV+ VCPHC + IVT +RYDNG LT+LL +GC GCCLIPF V KDV H CP CN +GE+RR+ Sbjct: 54 YGCLPVNTVCPHCQAQIVTGIRYDNGLLTWLLCGGLALLGCWLGCCLIPFCVDDCKDVIHVCPSCNMKVGEHRRV 128
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Match: SMESG000033033.1 (SMESG000033033.1) HSP 1 Score: 68.5514 bits (166), Expect = 2.452e-15 Identity = 39/95 (41.05%), Postives = 52/95 (54.74%), Query Frame = 2 Query: 113 MDPAKNAPPRY-GPAAVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVC--GCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388 MD K R + FGT S+VCP C I+T V++ G T+L F IG C GCCLIPF +++ KD H+CP+C+ LG Y+R Sbjct: 1 MDVEKTESMRIVTDEKIIGFGTEEKSIVCPKCLEEILTVVKFKVGCQTWLFCF---GIGIFCPLGCCLIPFCLRECKDAHHFCPKCDRYLGRYKR 92
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Match: SMESG000064937.1 (SMESG000064937.1) HSP 1 Score: 62.003 bits (149), Expect = 1.977e-12 Identity = 26/71 (36.62%), Postives = 44/71 (61.97%), Query Frame = 2 Query: 179 PVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391 P+ M+CP C + +VT V + G L++LL+ + CF C+ C ++ + KD H+CP C+A++G Y R+ Sbjct: 56 PIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNRL 125 The following BLAST results are available for this feature:
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 4
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30017706 ID=SMED30017706|Name=Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like|organism=Schmidtea mediterranea sexual|type=transcript|length=600bpback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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