Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like

Overview
NameLipopolysaccharide-induced tumor necrosis factor-alpha factor-like
Smed IDSMED30017706
Length (bp)600
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like (SMED30017706) t-SNE clustered cells

Violin plots show distribution of expression levels for Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like (SMED30017706) in cells (dots) of each of the 12 neoblast clusters.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30017706

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
reproductive organSMED30017706 Contig34413newmark_estsPMID:28434803
Rouhana et al., 2017
whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30017706 Contig34413uc_Smed_v2PMID:28434803
Rouhana et al., 2017
whole organism adult hermaphrodite RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Match: LITAF (lipopolysaccharide induced TNF factor [Source:HGNC Symbol;Acc:HGNC:16841])

HSP 1 Score: 84.7297 bits (208), Expect = 2.483e-20
Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   P+ M CP CN  IV+ + Y+ G LT+L     C +GC+ GCC IPF V   +DV HYCP C ALLG Y+R+
Sbjct:   87 FLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKRL 161          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Match: LITAF (lipopolysaccharide induced TNF factor [Source:HGNC Symbol;Acc:HGNC:16841])

HSP 1 Score: 84.7297 bits (208), Expect = 2.483e-20
Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   P+ M CP CN  IV+ + Y+ G LT+L     C +GC+ GCC IPF V   +DV HYCP C ALLG Y+R+
Sbjct:   87 FLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKRL 161          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Match: LITAF (lipopolysaccharide induced TNF factor [Source:HGNC Symbol;Acc:HGNC:16841])

HSP 1 Score: 84.7297 bits (208), Expect = 2.483e-20
Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   P+ M CP CN  IV+ + Y+ G LT+L     C +GC+ GCC IPF V   +DV HYCP C ALLG Y+R+
Sbjct:   87 FLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKRL 161          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Match: LITAF (lipopolysaccharide induced TNF factor [Source:HGNC Symbol;Acc:HGNC:16841])

HSP 1 Score: 84.7297 bits (208), Expect = 2.483e-20
Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   P+ M CP CN  IV+ + Y+ G LT+L     C +GC+ GCC IPF V   +DV HYCP C ALLG Y+R+
Sbjct:   87 FLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKRL 161          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Match: LITAF (lipopolysaccharide induced TNF factor [Source:HGNC Symbol;Acc:HGNC:16841])

HSP 1 Score: 84.7297 bits (208), Expect = 2.483e-20
Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   P+ M CP CN  IV+ + Y+ G LT+L     C +GC+ GCC IPF V   +DV HYCP C ALLG Y+R+
Sbjct:   87 FLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKRL 161          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Match: Y87G2A.18 (pep chromosome:WBcel235:I:13512384:13514320:-1 gene:WBGene00013604.1 transcript:Y87G2A.18.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y87G2A.18)

HSP 1 Score: 65.0846 bits (157), Expect = 1.058e-13
Identity = 36/107 (33.64%), Postives = 52/107 (48.60%), Query Frame = 2
Query:  110 LMDPAKNAPP-------RYGPAAVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCV------CGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            + D  +NAP        RY  +    +  MP+ M CPHC + IV+ +    G L +++  I  F+G        C CC +PFF+ Q  DV H CP C   LG + R+
Sbjct:   13 MEDVEQNAPEPNPQNDSRYITSRTSPYNVMPIEMDCPHCQNHIVSHIERVAGVLPWIIFAILAFLGIFLFIIPWCFCC-VPFFLDQLLDVNHSCPACKKFLGRFNRV 118          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Match: Y87G2A.18 (pep chromosome:WBcel235:I:13512313:13514290:-1 gene:WBGene00013604.1 transcript:Y87G2A.18.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y87G2A.18)

HSP 1 Score: 65.0846 bits (157), Expect = 1.058e-13
Identity = 36/107 (33.64%), Postives = 52/107 (48.60%), Query Frame = 2
Query:  110 LMDPAKNAPP-------RYGPAAVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCV------CGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            + D  +NAP        RY  +    +  MP+ M CPHC + IV+ +    G L +++  I  F+G        C CC +PFF+ Q  DV H CP C   LG + R+
Sbjct:   13 MEDVEQNAPEPNPQNDSRYITSRTSPYNVMPIEMDCPHCQNHIVSHIERVAGVLPWIIFAILAFLGIFLFIIPWCFCC-VPFFLDQLLDVNHSCPACKKFLGRFNRV 118          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Match: Y87G2A.19 (pep chromosome:WBcel235:I:13508785:13512026:1 gene:WBGene00044260.1 transcript:Y87G2A.19.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y87G2A.19)

HSP 1 Score: 55.8398 bits (133), Expect = 2.213e-10
Identity = 30/82 (36.59%), Postives = 40/82 (48.78%), Query Frame = 2
Query:  155 AVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCV---CGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            A  Y    P  + CP C     T +R+ NG  T++  FI    G          +PF V+ FKD +HYCP C A +G YRR+
Sbjct:   25 AKKYLSDRPQLLDCPRCKVHGETELRFVNGFFTYVSFFIILIFGFAILPLFFLWVPFCVETFKDAEHYCPSCRAWIGTYRRL 106          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Match: Y87G2A.19 (pep chromosome:WBcel235:I:13508814:13512026:1 gene:WBGene00044260.1 transcript:Y87G2A.19.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y87G2A.19)

HSP 1 Score: 55.8398 bits (133), Expect = 2.213e-10
Identity = 30/82 (36.59%), Postives = 40/82 (48.78%), Query Frame = 2
Query:  155 AVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCV---CGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            A  Y    P  + CP C     T +R+ NG  T++  FI    G          +PF V+ FKD +HYCP C A +G YRR+
Sbjct:   25 AKKYLSDRPQLLDCPRCKVHGETELRFVNGFFTYVSFFIILIFGFAILPLFFLWVPFCVETFKDAEHYCPSCRAWIGTYRRL 106          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Match: F36G3.3 (pep chromosome:WBcel235:X:9798839:9801038:1 gene:WBGene00009484.1 transcript:F36G3.3.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F36G3.3)

HSP 1 Score: 55.0694 bits (131), Expect = 1.063e-9
Identity = 27/70 (38.57%), Postives = 39/70 (55.71%), Query Frame = 2
Query:  182 VSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
              + CP+C   IVT  +   G LT++        GC C CC +PF ++  KD+ H CP C A++G +RRI
Sbjct:   80 TKLQCPYCRMDIVTRTKSVYGLLTWIFFAALFLFGCWC-CCFLPFCLRSCKDIIHTCPNCRAMIGVHRRI 148          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Match: CG32280 (gene:FBgn0052280 transcript:FBtr0073031)

HSP 1 Score: 69.3218 bits (168), Expect = 4.320e-15
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 2
Query:  188 MVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388
            M+CP C++ I TT R + G + +L  F+    GC  GCCLIP  +    DV H CP C A LG YRR
Sbjct:   64 MICPSCHAEIETTTRTEPGMIAYLSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRYRR 130          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Match: CG32280 (gene:FBgn0052280 transcript:FBtr0073030)

HSP 1 Score: 69.3218 bits (168), Expect = 4.320e-15
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 2
Query:  188 MVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388
            M+CP C++ I TT R + G + +L  F+    GC  GCCLIP  +    DV H CP C A LG YRR
Sbjct:   64 MICPSCHAEIETTTRTEPGMIAYLSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRYRR 130          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Match: CG32280 (gene:FBgn0052280 transcript:FBtr0344220)

HSP 1 Score: 69.3218 bits (168), Expect = 4.320e-15
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 2
Query:  188 MVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388
            M+CP C++ I TT R + G + +L  F+    GC  GCCLIP  +    DV H CP C A LG YRR
Sbjct:   64 MICPSCHAEIETTTRTEPGMIAYLSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRYRR 130          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Match: CG32280 (gene:FBgn0052280 transcript:FBtr0073032)

HSP 1 Score: 69.3218 bits (168), Expect = 4.320e-15
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 2
Query:  188 MVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388
            M+CP C++ I TT R + G + +L  F+    GC  GCCLIP  +    DV H CP C A LG YRR
Sbjct:   64 MICPSCHAEIETTTRTEPGMIAYLSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRYRR 130          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Match: CG4250 (gene:FBgn0034761 transcript:FBtr0309802)

HSP 1 Score: 53.9138 bits (128), Expect = 2.452e-9
Identity = 30/89 (33.71%), Postives = 39/89 (43.82%), Query Frame = 2
Query:  122 AKNAPPRYGPAAVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388
              NAPP          G  P    CP C     T V ++  T T LLA + C +G +C CC IP+     +  KH C  C A +G Y+ 
Sbjct:   54 GNNAPPNV-------LGQCPSVATCPSCGVRRETKVEFEPSTKTHLLALLICMLGGIC-CCCIPYCTDSCQSAKHTCTSCGAYVGTYKN 134          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Match: litaf (lipopolysaccharide-induced TNF factor [Source:NCBI gene;Acc:431731])

HSP 1 Score: 75.0998 bits (183), Expect = 7.709e-17
Identity = 31/74 (41.89%), Postives = 48/74 (64.86%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388
            FG +PV   CP C+ +++T + Y +G L +L        GC+ GCCLIPF ++  KDV H+CP C+++LG ++R
Sbjct:   89 FGNVPVQAHCPVCSQSVITRLEYSSGPLVWLSCAGLAVFGCIYGCCLIPFCIEDLKDVTHHCPNCSSVLGVHKR 162          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Match: si:dkeyp-75b4.8 (si:dkeyp-75b4.8 [Source:ZFIN;Acc:ZDB-GENE-090313-395])

HSP 1 Score: 74.3294 bits (181), Expect = 3.088e-16
Identity = 33/80 (41.25%), Postives = 47/80 (58.75%), Query Frame = 2
Query:  149 PAAVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388
            P         P S+VC +C+ +IVT V Y  G +++L+  +  F+G +CGCC+IPFFV+ F D  H CP C   +G Y R
Sbjct:  114 PQQSTTLDDTPASIVCRYCHQSIVTHVEYKPGVISWLMCVVISFLGGICGCCVIPFFVRGFLDAHHSCPLCKRHIGIYTR 193          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Match: cdip1 (cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18])

HSP 1 Score: 72.0182 bits (175), Expect = 2.491e-15
Identity = 32/75 (42.67%), Postives = 42/75 (56.00%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F + PV  VCPHC   I+T + +D G +  L+     F+GC  GCCLIP  +   KDV H CP C   +  Y+RI
Sbjct:  138 FQSAPVQTVCPHCQQPIITRISHDIGLMNTLVCMFCFFVGCDLGCCLIPCLIDDLKDVTHTCPNCKGYIYTYKRI 212          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Match: cdip1 (cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18])

HSP 1 Score: 72.0182 bits (175), Expect = 2.491e-15
Identity = 32/75 (42.67%), Postives = 42/75 (56.00%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F + PV  VCPHC   I+T + +D G +  L+     F+GC  GCCLIP  +   KDV H CP C   +  Y+RI
Sbjct:  138 FQSAPVQTVCPHCQQPIITRISHDIGLMNTLVCMFCFFVGCDLGCCLIPCLIDDLKDVTHTCPNCKGYIYTYKRI 212          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Match: si:ch211-157c3.4 (si:ch211-157c3.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8454])

HSP 1 Score: 66.2402 bits (160), Expect = 1.229e-13
Identity = 33/88 (37.50%), Postives = 43/88 (48.86%), Query Frame = 2
Query:  110 LMDPAKNAPPRYGPAAVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALL 373
            +   +  A  +Y        G  P    C  C   ++T V Y  G   +L+  +  F G V GCCLIPFF+K FKD  H CPRCN +L
Sbjct:   53 VQSQSTEARNKYVSYESYELGRKPAMATCTSCQQQVLTNVTYKVGVYAWLMCILIFFCGFVLGCCLIPFFMKFFKDAYHSCPRCNKIL 140          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Match: aff2 (AF4/FMR2 family member 2 [Source:Xenbase;Acc:XB-GENE-952102])

HSP 1 Score: 85.1149 bits (209), Expect = 3.084e-20
Identity = 38/71 (53.52%), Postives = 46/71 (64.79%), Query Frame = 2
Query:  179 PVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            PV M C  CNS I T + Y +G L +L     C +GC+ GCCLIPF +   KDV HYCP C+ALLG Y+RI
Sbjct:  118 PVQMCCRSCNSMITTRLEYSSGALAWLSCGGLCLLGCIGGCCLIPFCIDSLKDVDHYCPNCHALLGSYKRI 188          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Match: pfkfb4 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:Xenbase;Acc:XB-GENE-1001570])

HSP 1 Score: 79.337 bits (194), Expect = 2.840e-18
Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   PV+  CP+CN  I+T ++Y  G  +++L  +  F GC  GCC+IPF + + KDV HYCP CN LL +Y+R+
Sbjct:   98 FQDTPVTATCPNCNQRIITRLQYSVGLFSWILFAVFMFFGCWLGCCIIPFVMDRCKDVDHYCPSCNYLLHKYKRM 172          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Match: pfkfb4 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:Xenbase;Acc:XB-GENE-1001570])

HSP 1 Score: 79.337 bits (194), Expect = 3.057e-18
Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   PV+  CP+CN  I+T ++Y  G  +++L  +  F GC  GCC+IPF + + KDV HYCP CN LL +Y+R+
Sbjct:   98 FQDTPVTATCPNCNQRIITRLQYSVGLFSWILFAVFMFFGCWLGCCIIPFVMDRCKDVDHYCPSCNYLLHKYKRM 172          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Match: pfkfb4 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:Xenbase;Acc:XB-GENE-1001570])

HSP 1 Score: 79.7221 bits (195), Expect = 3.211e-18
Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   PV+  CP+CN  I+T ++Y  G  +++L  +  F GC  GCC+IPF + + KDV HYCP CN LL +Y+R+
Sbjct:  109 FQDTPVTATCPNCNQRIITRLQYSVGLFSWILFAVFMFFGCWLGCCIIPFVMDRCKDVDHYCPSCNYLLHKYKRM 183          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Match: pfkfb4 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:Xenbase;Acc:XB-GENE-1001570])

HSP 1 Score: 79.337 bits (194), Expect = 3.223e-18
Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   PV+  CP+CN  I+T ++Y  G  +++L  +  F GC  GCC+IPF + + KDV HYCP CN LL +Y+R+
Sbjct:   98 FQDTPVTATCPNCNQRIITRLQYSVGLFSWILFAVFMFFGCWLGCCIIPFVMDRCKDVDHYCPSCNYLLHKYKRM 172          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Match: Litaf (LPS-induced TN factor [Source:MGI Symbol;Acc:MGI:1929512])

HSP 1 Score: 85.5001 bits (210), Expect = 8.366e-21
Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   PV M CP C+  IVT + Y+ G LT+L     C +GCV GCC IPF V   +DV HYCP C ALLG Y+R+
Sbjct:   87 FYDRPVQMCCPSCSKMIVTQLSYNAGALTWLSCGSLCLLGCVAGCCFIPFCVDALQDVDHYCPNCKALLGTYKRL 161          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Match: Litaf (LPS-induced TN factor [Source:MGI Symbol;Acc:MGI:1929512])

HSP 1 Score: 85.5001 bits (210), Expect = 8.366e-21
Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   PV M CP C+  IVT + Y+ G LT+L     C +GCV GCC IPF V   +DV HYCP C ALLG Y+R+
Sbjct:   87 FYDRPVQMCCPSCSKMIVTQLSYNAGALTWLSCGSLCLLGCVAGCCFIPFCVDALQDVDHYCPNCKALLGTYKRL 161          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Match: Cdip1 (cell death inducing Trp53 target 1 [Source:MGI Symbol;Acc:MGI:1913876])

HSP 1 Score: 82.8037 bits (203), Expect = 2.054e-19
Identity = 36/75 (48.00%), Postives = 45/75 (60.00%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   PV  VCPHC   I T + Y+ G + F+L F  CF+GC  GCCLIP  +  FKDV H CP C A +  Y+R+
Sbjct:  116 FEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYICTYKRL 190          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Match: Cdip1 (cell death inducing Trp53 target 1 [Source:MGI Symbol;Acc:MGI:1913876])

HSP 1 Score: 82.4185 bits (202), Expect = 3.069e-19
Identity = 36/75 (48.00%), Postives = 45/75 (60.00%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   PV  VCPHC   I T + Y+ G + F+L F  CF+GC  GCCLIP  +  FKDV H CP C A +  Y+R+
Sbjct:  133 FEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYICTYKRL 207          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Match: Cdip1 (cell death inducing Trp53 target 1 [Source:MGI Symbol;Acc:MGI:1913876])

HSP 1 Score: 82.4185 bits (202), Expect = 3.069e-19
Identity = 36/75 (48.00%), Postives = 45/75 (60.00%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   PV  VCPHC   I T + Y+ G + F+L F  CF+GC  GCCLIP  +  FKDV H CP C A +  Y+R+
Sbjct:  133 FEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYICTYKRL 207          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Match: sp|P0C0T0|LITAF_RAT (Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog OS=Rattus norvegicus OX=10116 GN=Litaf PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.704e-20
Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   P+ M CP CN  IVT + Y+ G LT+L     C +GCV GCC IPF V   +DV HYCP C ALLG Y+R+
Sbjct:   87 FYDRPIQMCCPSCNKMIVTQLSYNAGALTWLSCGSLCLLGCVAGCCFIPFCVDALQDVDHYCPNCKALLGTYKRL 161          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Match: sp|Q9JLJ0|LITAF_MOUSE (Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog OS=Mus musculus OX=10090 GN=Litaf PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.852e-20
Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   PV M CP C+  IVT + Y+ G LT+L     C +GCV GCC IPF V   +DV HYCP C ALLG Y+R+
Sbjct:   87 FYDRPVQMCCPSCSKMIVTQLSYNAGALTWLSCGSLCLLGCVAGCCFIPFCVDALQDVDHYCPNCKALLGTYKRL 161          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Match: sp|Q6P828|LITAF_XENTR (Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog OS=Xenopus tropicalis OX=8364 GN=litaf PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.051e-19
Identity = 38/71 (53.52%), Postives = 46/71 (64.79%), Query Frame = 2
Query:  179 PVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            PV M C  CNS I T + Y +G L +L     C +GC+ GCCLIPF +   KDV HYCP C+ALLG Y+RI
Sbjct:   78 PVQMCCRSCNSMITTRLEYSSGALAWLSCGGLCLLGCIGGCCLIPFCIDSLKDVDHYCPNCHALLGSYKRI 148          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Match: sp|Q99732|LITAF_HUMAN (Lipopolysaccharide-induced tumor necrosis factor-alpha factor OS=Homo sapiens OX=9606 GN=LITAF PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.193e-19
Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   P+ M CP CN  IV+ + Y+ G LT+L     C +GC+ GCC IPF V   +DV HYCP C ALLG Y+R+
Sbjct:   87 FLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKRL 161          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Match: sp|Q8QGW7|LITAF_CHICK (Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog OS=Gallus gallus OX=9031 GN=LITAF PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 6.342e-19
Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   PV M CP CN  IVT + Y++G LT+L       +GC+ GCCLIPF V   KDV+H+CP CNA +G Y+R+
Sbjct:   74 FYDRPVQMSCPSCNQMIVTRLCYESGALTWLSCGGLFLLGCIAGCCLIPFCVDALKDVEHFCPNCNAHVGSYKRL 148          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Match: T1FXV4 (LITAF domain-containing protein OS=Helobdella robusta OX=6412 GN=20213652 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.096e-20
Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = 2
Query:  179 PVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            P +  CP+CN+ ++T+  Y NG LT++L F+  F GC+ GCCLIPFFVK  KDV H CP+CN ++GE++RI
Sbjct:    7 PYNTTCPNCNANVLTSAEYKNGALTWVLCFVLAFFGCILGCCLIPFFVKATKDVVHRCPQCNMVVGEHKRI 77          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Match: A0A3M6UJR4 (LITAF domain-containing protein OS=Pocillopora damicornis OX=46731 GN=pdam_00000257 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.272e-20
Identity = 43/75 (57.33%), Postives = 51/75 (68.00%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            FG  PVSMVCPHC + I+T   Y +GTLT+L A   C +GC  GCCLIPF +   KDV H CP C+A LG YRR+
Sbjct:   70 FGESPVSMVCPHCQTHIITCTTYQDGTLTWLSAGALCLLGCWLGCCLIPFCLDGCKDVIHSCPNCHARLGSYRRM 144          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Match: A0A3L8SHM5 (LITAF domain-containing protein OS=Chloebia gouldiae OX=44316 GN=DV515_00007974 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.050e-19
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   PV M CP CN  IVT + YD+G LT+L     C +GC+ GCCLIPF +   KDV H CP+CNAL+G Y+R+
Sbjct:   73 FYDRPVQMCCPSCNQMIVTRLSYDSGALTWLSCGGLCLLGCIAGCCLIPFCIDALKDVDHTCPKCNALVGSYKRL 147          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Match: H0Z381 (Lipopolysaccharide induced TNF factor OS=Taeniopygia guttata OX=59729 GN=LITAF PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.131e-19
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   PV M CP CN  IVT + YD+G LT+L     C +GC+ GCCLIPF +   KDV H CP+CNAL+G Y+R+
Sbjct:   73 FYDRPVQMCCPSCNQMIVTRLSYDSGALTWLSCGGLCLLGCIAGCCLIPFCIDALKDVDHTCPKCNALVGSYKRL 147          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Match: A0A093QYC4 (Lipopolysaccharide-induced tumor necrosis factor-alpha factor OS=Phalacrocorax carbo OX=9209 GN=N336_03629 PE=4 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.811e-19
Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 2
Query:  179 PVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            PV M CP CN  IVT + YD+G LT+L     C +GCV GCCLIPF +   KDV H CP CNAL+G Y+R+
Sbjct:   77 PVQMCCPSCNQMIVTRLSYDSGALTWLSCGGLCLLGCVAGCCLIPFCIDALKDVDHTCPNCNALIGSYKRL 147          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Match: litaf (lipopolysaccharide-induced TNF factor [Source:NCBI gene;Acc:431731])

HSP 1 Score: 78.1814 bits (191), Expect = 3.075e-18
Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            FG  PV + CP+C  T+VT + Y +GT+T+L        GC+ GCCLIPF V   KDV H+CP C+++LG ++R+
Sbjct:   78 FGHTPVQVHCPNCAQTVVTRLDYSSGTMTWLTCAGLFIFGCIYGCCLIPFCVDSLKDVTHHCPNCSSVLGVFKRL 152          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Match: cdip1 (cell death inducing p53 target 1 [Source:NCBI gene;Acc:103033134])

HSP 1 Score: 72.4034 bits (176), Expect = 1.932e-15
Identity = 32/75 (42.67%), Postives = 41/75 (54.67%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F + PV  VCPHC   I+T + +D G +  L      F+GC  GCCLIP  +   KDV H CP C   +  Y+RI
Sbjct:  137 FQSAPVQTVCPHCQQAIITRISHDVGLMNTLFCLFCFFVGCDLGCCLIPCLIDDLKDVTHTCPNCKGYIYTYKRI 211          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Match: si:ch211-157c3.4 (lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog [Source:NCBI gene;Acc:103024010])

HSP 1 Score: 67.781 bits (164), Expect = 2.142e-14
Identity = 36/86 (41.86%), Postives = 43/86 (50.00%), Query Frame = 2
Query:  116 DPAKNAPPRYGPAAVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALL 373
            D AKN    Y        G  P +  C  C   ++T V Y  G   +L+  +    G V GCCLIPFFVK FKD  H CPRCN +L
Sbjct:   54 DNAKNKYVSYDSE----LGRSPGTTTCTSCREQVLTNVTYKVGAFAWLMCILFILCGLVIGCCLIPFFVKYFKDAYHTCPRCNRIL 135          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Match: ENSAMXT00000041239.1 (pep primary_assembly:Astyanax_mexicanus-2.0:12:195968:202131:-1 gene:ENSAMXG00000040302.1 transcript:ENSAMXT00000041239.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 66.2402 bits (160), Expect = 6.375e-14
Identity = 35/76 (46.05%), Postives = 45/76 (59.21%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLL-AFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   PV + CP C  T VT V+Y  G LT+L    + CF+GC    CLIPF V + +D KH C  C A+LG Y+R+
Sbjct:   50 FTDSPVQVTCPTCRHTAVTQVQYTPGLLTYLFCGGLLCFLGC----CLIPFCVDRLRDAKHVCSNCKAVLGVYKRL 121          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Match: ENSAMXT00000036300.1 (lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog [Source:NCBI gene;Acc:111193504])

HSP 1 Score: 54.6842 bits (130), Expect = 1.296e-9
Identity = 38/102 (37.25%), Postives = 53/102 (51.96%), Query Frame = 2
Query:  116 DPA--KNAPP----RYGPAAV--PYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLL--AFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            +PA  ++APP    + GPA V  P+ G  P  M C +C   IVT  +   G LT+ +    + C I      CLIPF     KDV+H CP C+ +L  Y+R+
Sbjct:   34 EPAVIQSAPPITVVQTGPAVVVQPHLGESPGRMKCMYCQQEIVTVTKPVTGILTWTIFGVLLACLIW---PFCLIPFCCAPCKDVEHTCPYCHNILSVYKRM 132          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Nematostella
Match: EDO33373 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSF9])

HSP 1 Score: 79.7221 bits (195), Expect = 7.655e-20
Identity = 40/75 (53.33%), Postives = 47/75 (62.67%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F   PVSM CP C++TIVT   Y  GTLT+L  F  C IGC  GCC IPF V   KDV H CP C + +G +RR+
Sbjct:   29 FYETPVSMNCPTCHATIVTATDYVTGTLTWLACFGLCIIGCDLGCCFIPFCVDSMKDVVHTCPNCRSQVGVFRRM 103          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Nematostella
Match: EDO37753 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SES1])

HSP 1 Score: 67.3958 bits (163), Expect = 1.687e-15
Identity = 35/68 (51.47%), Postives = 41/68 (60.29%), Query Frame = 2
Query:  188 MVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            MVC  C + IVT   Y  G LT+LL+   C +G   GCCLIPF +   KDV H CP C A LG YRR+
Sbjct:    1 MVCSFCQTHIVTATTYRYGALTWLLSGGICLLGGWLGCCLIPFCLDGCKDVIHTCPNCQAQLGVYRRL 68          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Nematostella
Match: EDO37779 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SEW4])

HSP 1 Score: 66.2402 bits (160), Expect = 8.635e-14
Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 2
Query:  194 CPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388
            C  C + ++T VR+  G +T  ++ +   +GCV GCCL+PF +K  +DV H CP C   LG+YRR
Sbjct:   91 CGSCMNHMMTVVRFRIGRMTVAVSALVFMLGCVAGCCLVPFIIKGLRDVIHSCPNCQITLGKYRR 155          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Nematostella
Match: EDO42963 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S062])

HSP 1 Score: 60.4622 bits (145), Expect = 2.286e-12
Identity = 32/76 (42.11%), Postives = 42/76 (55.26%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFIT-CFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            FG  P SMVCP+C +TIVT   Y  GT  +L+  +  CF      CC +PF +   KDV H CP C   +G + R+
Sbjct:   33 FGESPTSMVCPYCQATIVTATSYVPGTCAWLICLVIFCFFW---PCCFLPFVLDGCKDVVHSCPNCQRQVGVFTRL 105          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Match: ENSORLT00000037533.1 (pep primary_assembly:ASM223467v1:1:23682164:23683902:-1 gene:ENSORLG00000026577.1 transcript:ENSORLT00000037533.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 74.3294 bits (181), Expect = 3.411e-17
Identity = 38/83 (45.78%), Postives = 49/83 (59.04%), Query Frame = 2
Query:  143 YGPAAVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            Y   AV   G  PV + CP C+ T+++ V +  G LT+LL     F G V GCCLIPF V + KD KH CP C  +LG Y+R+
Sbjct:   24 YMLVAVRPLGANPVQIACPKCHRTVLSKVDHSAGLLTYLLCGGLFFCGFVLGCCLIPFCVDRVKDAKHSCPSCKTILGVYKRL 106          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Match: cdip1 (cell death inducing p53 target 1 [Source:NCBI gene;Acc:101173632])

HSP 1 Score: 72.7886 bits (177), Expect = 1.224e-15
Identity = 34/75 (45.33%), Postives = 41/75 (54.67%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            F T PV  VCPHC   IVT + +D G +  L      F+GC  GCCLIP  +   KDV H CP C   +  Y+RI
Sbjct:  130 FQTSPVQTVCPHCQQAIVTRISHDVGLMNTLFCLFCFFVGCDLGCCLIPCLIDDLKDVTHTCPYCKGYIYTYKRI 204          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Match: ENSORLT00000040558.1 (cell death-inducing p53-target protein 1-like [Source:NCBI gene;Acc:101164847])

HSP 1 Score: 70.4774 bits (171), Expect = 1.443e-14
Identity = 32/69 (46.38%), Postives = 41/69 (59.42%), Query Frame = 2
Query:  158 VPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCN 364
            V   G  P +  CP C + IVT  R+  G  + L+ F+   +GCV GCCLIPFF  +FK+V H CPRC 
Sbjct:  163 VESLGHKPATTKCPSCQAVIVTQTRFKVGLSSCLVCFVCSTLGCVAGCCLIPFFTNRFKNVLHSCPRCQ 231          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Match: si:ch211-202h22.9 (si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1143])

HSP 1 Score: 68.1662 bits (165), Expect = 4.808e-14
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 2
Query:  161 PYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            P+    P  M+CPHC +T+VT   +  G  T+L+  +   IGC   CCLIPF V   KDV+H CP CN +L  +RR+
Sbjct:  113 PHPTDCPGQMLCPHCQNTVVTKTEHKVGMQTWLIFGVLGIIGCW-PCCLIPFCVNSCKDVQHSCPSCNNVLHVHRRM 188          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Match: ENSORLT00000033265.1 (pep primary_assembly:ASM223467v1:8:8133676:8134078:-1 gene:ENSORLG00000030072.1 transcript:ENSORLT00000033265.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 62.3882 bits (150), Expect = 1.155e-12
Identity = 25/71 (35.21%), Postives = 39/71 (54.93%), Query Frame = 2
Query:  179 PVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            P    CP C   +VT       ++T+L+  +T  +GCV GCCLIPF   +FK + H CP+C   +   +++
Sbjct:   32 PSRTQCPQCQQFVVTETSTSISSVTWLVCVMTALLGCVAGCCLIPFCSNKFKSITHRCPKCRTSIATLKKL 102          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Match: SMESG000079265.1 (SMESG000079265.1)

HSP 1 Score: 149.058 bits (375), Expect = 6.085e-47
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 2
Query:  176 MPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            MPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI
Sbjct:    1 MPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 72          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Match: SMESG000079265.1 (SMESG000079265.1)

HSP 1 Score: 141.354 bits (355), Expect = 6.475e-44
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 2
Query:  188 MVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            MVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI
Sbjct:    1 MVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 68          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Match: SMESG000020853.1 (SMESG000020853.1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.322e-20
Identity = 42/75 (56.00%), Postives = 52/75 (69.33%), Query Frame = 2
Query:  167 FGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            +G +PV+ VCPHC + IVT +RYDNG LT+LL      +GC  GCCLIPF V   KDV H CP CN  +GE+RR+
Sbjct:   54 YGCLPVNTVCPHCQAQIVTGIRYDNGLLTWLLCGGLALLGCWLGCCLIPFCVDDCKDVIHVCPSCNMKVGEHRRV 128          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Match: SMESG000033033.1 (SMESG000033033.1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.452e-15
Identity = 39/95 (41.05%), Postives = 52/95 (54.74%), Query Frame = 2
Query:  113 MDPAKNAPPRY-GPAAVPYFGTMPVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVC--GCCLIPFFVKQFKDVKHYCPRCNALLGEYRR 388
            MD  K    R      +  FGT   S+VCP C   I+T V++  G  T+L  F    IG  C  GCCLIPF +++ KD  H+CP+C+  LG Y+R
Sbjct:    1 MDVEKTESMRIVTDEKIIGFGTEEKSIVCPKCLEEILTVVKFKVGCQTWLFCF---GIGIFCPLGCCLIPFCLRECKDAHHFCPKCDRYLGRYKR 92          
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Match: SMESG000064937.1 (SMESG000064937.1)

HSP 1 Score: 62.003 bits (149), Expect = 1.977e-12
Identity = 26/71 (36.62%), Postives = 44/71 (61.97%), Query Frame = 2
Query:  179 PVSMVCPHCNSTIVTTVRYDNGTLTFLLAFITCFIGCVCGCCLIPFFVKQFKDVKHYCPRCNALLGEYRRI 391
            P+ M+CP C + +VT V  + G L++LL+ + CF  C+  C ++   +   KD  H+CP C+A++G Y R+
Sbjct:   56 PIQMICPSCQNLVVTRVEEETGALSWLLSGLFCFF-CLIPCAVLALCIGDCKDTIHFCPNCDAIIGRYNRL 125          
The following BLAST results are available for this feature:
BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
LITAF2.483e-2049.33lipopolysaccharide induced TNF factor [Source:HGNC... [more]
LITAF2.483e-2049.33lipopolysaccharide induced TNF factor [Source:HGNC... [more]
LITAF2.483e-2049.33lipopolysaccharide induced TNF factor [Source:HGNC... [more]
LITAF2.483e-2049.33lipopolysaccharide induced TNF factor [Source:HGNC... [more]
LITAF2.483e-2049.33lipopolysaccharide induced TNF factor [Source:HGNC... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Y87G2A.181.058e-1333.64pep chromosome:WBcel235:I:13512384:13514320:-1 gen... [more]
Y87G2A.181.058e-1333.64pep chromosome:WBcel235:I:13512313:13514290:-1 gen... [more]
Y87G2A.192.213e-1036.59pep chromosome:WBcel235:I:13508785:13512026:1 gene... [more]
Y87G2A.192.213e-1036.59pep chromosome:WBcel235:I:13508814:13512026:1 gene... [more]
F36G3.31.063e-938.57pep chromosome:WBcel235:X:9798839:9801038:1 gene:W... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
CG322804.320e-1546.27gene:FBgn0052280 transcript:FBtr0073031[more]
CG322804.320e-1546.27gene:FBgn0052280 transcript:FBtr0073030[more]
CG322804.320e-1546.27gene:FBgn0052280 transcript:FBtr0344220[more]
CG322804.320e-1546.27gene:FBgn0052280 transcript:FBtr0073032[more]
CG42502.452e-933.71gene:FBgn0034761 transcript:FBtr0309802[more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
litaf7.709e-1741.89lipopolysaccharide-induced TNF factor [Source:NCBI... [more]
si:dkeyp-75b4.83.088e-1641.25si:dkeyp-75b4.8 [Source:ZFIN;Acc:ZDB-GENE-090313-3... [more]
cdip12.491e-1542.67cell death-inducing p53 target 1 [Source:ZFIN;Acc:... [more]
cdip12.491e-1542.67cell death-inducing p53 target 1 [Source:ZFIN;Acc:... [more]
si:ch211-157c3.41.229e-1337.50si:ch211-157c3.4 [Source:ZFIN;Acc:ZDB-GENE-030131-... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
aff23.084e-2053.52AF4/FMR2 family member 2 [Source:Xenbase;Acc:XB-GE... [more]
pfkfb42.840e-1845.336-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
pfkfb43.057e-1845.336-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
pfkfb43.211e-1845.336-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
pfkfb43.223e-1845.336-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Litaf8.366e-2152.00LPS-induced TN factor [Source:MGI Symbol;Acc:MGI:1... [more]
Litaf8.366e-2152.00LPS-induced TN factor [Source:MGI Symbol;Acc:MGI:1... [more]
Cdip12.054e-1948.00cell death inducing Trp53 target 1 [Source:MGI Sym... [more]
Cdip13.069e-1948.00cell death inducing Trp53 target 1 [Source:MGI Sym... [more]
Cdip13.069e-1948.00cell death inducing Trp53 target 1 [Source:MGI Sym... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P0C0T0|LITAF_RAT1.704e-2052.00Lipopolysaccharide-induced tumor necrosis factor-a... [more]
sp|Q9JLJ0|LITAF_MOUSE5.852e-2052.00Lipopolysaccharide-induced tumor necrosis factor-a... [more]
sp|Q6P828|LITAF_XENTR1.051e-1953.52Lipopolysaccharide-induced tumor necrosis factor-a... [more]
sp|Q99732|LITAF_HUMAN1.193e-1949.33Lipopolysaccharide-induced tumor necrosis factor-a... [more]
sp|Q8QGW7|LITAF_CHICK6.342e-1950.67Lipopolysaccharide-induced tumor necrosis factor-a... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
T1FXV41.096e-2053.52LITAF domain-containing protein OS=Helobdella robu... [more]
A0A3M6UJR47.272e-2057.33LITAF domain-containing protein OS=Pocillopora dam... [more]
A0A3L8SHM51.050e-1953.33LITAF domain-containing protein OS=Chloebia gouldi... [more]
H0Z3811.131e-1953.33Lipopolysaccharide induced TNF factor OS=Taeniopyg... [more]
A0A093QYC41.811e-1956.34Lipopolysaccharide-induced tumor necrosis factor-a... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
litaf3.075e-1846.67lipopolysaccharide-induced TNF factor [Source:NCBI... [more]
cdip11.932e-1542.67cell death inducing p53 target 1 [Source:NCBI gene... [more]
si:ch211-157c3.42.142e-1441.86lipopolysaccharide-induced tumor necrosis factor-a... [more]
ENSAMXT00000041239.16.375e-1446.05pep primary_assembly:Astyanax_mexicanus-2.0:12:195... [more]
ENSAMXT00000036300.11.296e-937.25lipopolysaccharide-induced tumor necrosis factor-a... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 4
Match NameE-valueIdentityDescription
EDO333737.655e-2053.33Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO377531.687e-1551.47Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO377798.635e-1443.08Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO429632.286e-1242.11Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSORLT00000037533.13.411e-1745.78pep primary_assembly:ASM223467v1:1:23682164:236839... [more]
cdip11.224e-1545.33cell death inducing p53 target 1 [Source:NCBI gene... [more]
ENSORLT00000040558.11.443e-1446.38cell death-inducing p53-target protein 1-like [Sou... [more]
si:ch211-202h22.94.808e-1444.16si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131... [more]
ENSORLT00000033265.11.155e-1235.21pep primary_assembly:ASM223467v1:8:8133676:8134078... [more]
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BLAST of Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000079265.16.085e-47100.00SMESG000079265.1[more]
SMESG000079265.16.475e-44100.00SMESG000079265.1[more]
SMESG000020853.15.322e-2056.00SMESG000020853.1[more]
SMESG000033033.12.452e-1541.05SMESG000033033.1[more]
SMESG000064937.11.977e-1236.62SMESG000064937.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30017706 ID=SMED30017706|Name=Lipopolysaccharide-induced tumor necrosis factor-alpha factor-like|organism=Schmidtea mediterranea sexual|type=transcript|length=600bp
GAAAATTGAATAAAGTTTTAAATTCTACAACAAGTTAAAATTGATTTTTA
AAATCTTTTTAATTAGTTTTGAGCATTAATTATTATTAATTTCAATTTCT
CAACAATTTTTAATGGATCCAGCAAAGAACGCCCCTCCTCGTTATGGACC
AGCCGCAGTACCTTATTTTGGAACTATGCCTGTCTCGATGGTGTGTCCGC
ATTGCAACTCGACTATCGTGACAACGGTGCGCTATGATAATGGAACATTG
ACATTTCTCTTAGCTTTTATCACCTGTTTCATAGGATGCGTATGTGGGTG
TTGCCTTATTCCATTTTTCGTAAAACAGTTTAAAGATGTGAAGCATTATT
GTCCAAGATGTAATGCCTTGTTGGGAGAATATCGTAGGATCTAAGCTTGG
ATCAAATGACAATCAAATAGATGTTCAAATAGATGTCAAATAGGTGTACA
TTGTAATTGGCAGGTTATGTTTCTTATGATTATTCGACTGAATGTTTGAT
TTTTACTGTTATTAGATATAAACATAATTATTATGATATTGTAATAAAAT
TTAAAGAAATAAATATTTATTGTTGAAAAAAAAAAAAAAAAAAAATGCGA
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0016021integral component of membrane
GO:0005576extracellular region
GO:0005654nucleoplasm
GO:0005764lysosome
GO:0005765lysosomal membrane
GO:0005794Golgi apparatus
GO:0005829cytosol
GO:0005886plasma membrane
GO:0016020membrane
GO:0043231intracellular membrane-bounded organelle
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002089reproductive organ
Vocabulary: INTERPRO
TermDefinition
IPR037519LITAF_fam
IPR006629LITAF
Vocabulary: biological process
TermDefinition
GO:0001817regulation of cytokine production
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
GO:0006915apoptotic process
GO:0007165signal transduction
GO:0007568aging
GO:0032496response to lipopolysaccharide
GO:0042347negative regulation of NF-kappaB import into nucleus
GO:0043123positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0071222cellular response to lipopolysaccharide
Vocabulary: molecular function
TermDefinition
GO:0004871signal transducer activity
GO:0050699WW domain binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006629LPS-induced tumour necrosis factor alpha factorSMARTSM00714litafcoord: 23..92
e-value: 9.3E-23
score: 91.6
IPR006629LPS-induced tumour necrosis factor alpha factorPFAMPF10601zf-LITAF-likecoord: 22..91
e-value: 2.2E-26
score: 91.9
IPR006629LPS-induced tumour necrosis factor alpha factorPROSITEPS51837LITAFcoord: 8..92
score: 20.534
NoneNo IPR availablePANTHERPTHR23292:SF2LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTORcoord: 19..93
NoneNo IPR availableTMHMMTMhelixcoord: 48..70
IPR037519LITAF domain containing proteinPANTHERPTHR23292LIPOPOLYSACCHARIDE-INDUCED TRANSCRIPTION FACTOR REGULATING TUMOR NECROSIS FACTOR ALPHAcoord: 19..93