Protocadherin-11 X-linked
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30017705 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of Protocadherin-11 X-linked vs. Ensembl Human
Match: PCDH11Y (protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:HGNC:15813]) HSP 1 Score: 272.322 bits (695), Expect = 7.189e-76 Identity = 239/870 (27.47%), Postives = 404/870 (46.44%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLC----RFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-----FIECPEN--FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTP-RLFSLL-----------------ELIIHVVDGP-SSNPDYAIITN--FRIVLIVIPTLIGISFSVILLFVIKTVQKQKANRL 2642 Y++ EE + +GN++ DL L ++ K L T F + +I + + ++DREKLC R +H CF + +++L E +V IR ++ DINDN P+F I I E A + + ++P A+D D+ +N Y L ++ F + I+ K+ L + LDRE+KD Y++ ++ D G P S ++ L V++ D ND+ P F + I V I E A +G ++ + A D DIG N+K+ FS + L + A F +N +TG I + LDRE + L V+ SD G P + +M L V + D NDN P +I P N ++ EN + + I D D+ + +C + P F+L V F L + LD E+ Y++ +L D G P L+ S ++ I V D+NDN P F +S + + EN ++K+ A+D D G NA++ Y + + F +++ +G L ++ +D E+ + TI KD G P T+ V V+I D ND P V E++P+ V ++V DPD G V++++L + F + + N+ FDRE + Y+ V D G+ ++S +TI + D+NDN+P + P S + + S G + + D+D NA++ Y + + + F + ++GN+ L C V+DLG R+++K D G P LFS++ EL+ ++ P + N + A +++ V I++ + G V+++F+ V+ ++A L Sbjct: 49 YTIREEIPENVLIGNLLKDLNL-SLIPNKSL--TTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEH----------------------CFYEVEVAILP-DEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAIN--SKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI-LQVSVTDTNDNHPVFKETE---IEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFS-NLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMP-ARAMVL-VNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIP---FRLRPVFSNQ-----------FLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKP----VFIVPPYNYSYELVLPSTNP--GTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHL 863
BLAST of Protocadherin-11 X-linked vs. Ensembl Human
Match: PCDH11Y (protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:HGNC:15813]) HSP 1 Score: 272.322 bits (695), Expect = 7.189e-76 Identity = 239/870 (27.47%), Postives = 404/870 (46.44%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLC----RFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-----FIECPEN--FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTP-RLFSLL-----------------ELIIHVVDGP-SSNPDYAIITN--FRIVLIVIPTLIGISFSVILLFVIKTVQKQKANRL 2642 Y++ EE + +GN++ DL L ++ K L T F + +I + + ++DREKLC R +H CF + +++L E +V IR ++ DINDN P+F I I E A + + ++P A+D D+ +N Y L ++ F + I+ K+ L + LDRE+KD Y++ ++ D G P S ++ L V++ D ND+ P F + I V I E A +G ++ + A D DIG N+K+ FS + L + A F +N +TG I + LDRE + L V+ SD G P + +M L V + D NDN P +I P N ++ EN + + I D D+ + +C + P F+L V F L + LD E+ Y++ +L D G P L+ S ++ I V D+NDN P F +S + + EN ++K+ A+D D G NA++ Y + + F +++ +G L ++ +D E+ + TI KD G P T+ V V+I D ND P V E++P+ V ++V DPD G V++++L + F + + N+ FDRE + Y+ V D G+ ++S +TI + D+NDN+P + P S + + S G + + D+D NA++ Y + + + F + ++GN+ L C V+DLG R+++K D G P LFS++ EL+ ++ P + N + A +++ V I++ + G V+++F+ V+ ++A L Sbjct: 49 YTIREEIPENVLIGNLLKDLNL-SLIPNKSL--TTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEH----------------------CFYEVEVAILP-DEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAIN--SKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI-LQVSVTDTNDNHPVFKETE---IEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFS-NLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMP-ARAMVL-VNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIP---FRLRPVFSNQ-----------FLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKP----VFIVPPYNYSYELVLPSTNP--GTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHL 863
BLAST of Protocadherin-11 X-linked vs. Ensembl Human
Match: PCDH11Y (protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:HGNC:15813]) HSP 1 Score: 272.322 bits (695), Expect = 8.687e-76 Identity = 239/870 (27.47%), Postives = 404/870 (46.44%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLC----RFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-----FIECPEN--FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTP-RLFSLL-----------------ELIIHVVDGP-SSNPDYAIITN--FRIVLIVIPTLIGISFSVILLFVIKTVQKQKANRL 2642 Y++ EE + +GN++ DL L ++ K L T F + +I + + ++DREKLC R +H CF + +++L E +V IR ++ DINDN P+F I I E A + + ++P A+D D+ +N Y L ++ F + I+ K+ L + LDRE+KD Y++ ++ D G P S ++ L V++ D ND+ P F + I V I E A +G ++ + A D DIG N+K+ FS + L + A F +N +TG I + LDRE + L V+ SD G P + +M L V + D NDN P +I P N ++ EN + + I D D+ + +C + P F+L V F L + LD E+ Y++ +L D G P L+ S ++ I V D+NDN P F +S + + EN ++K+ A+D D G NA++ Y + + F +++ +G L ++ +D E+ + TI KD G P T+ V V+I D ND P V E++P+ V ++V DPD G V++++L + F + + N+ FDRE + Y+ V D G+ ++S +TI + D+NDN+P + P S + + S G + + D+D NA++ Y + + + F + ++GN+ L C V+DLG R+++K D G P LFS++ EL+ ++ P + N + A +++ V I++ + G V+++F+ V+ ++A L Sbjct: 60 YTIREEIPENVLIGNLLKDLNL-SLIPNKSL--TTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEH----------------------CFYEVEVAILP-DEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAIN--SKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI-LQVSVTDTNDNHPVFKETE---IEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFS-NLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMP-ARAMVL-VNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIP---FRLRPVFSNQ-----------FLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKP----VFIVPPYNYSYELVLPSTNP--GTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHL 874
BLAST of Protocadherin-11 X-linked vs. Ensembl Human
Match: PCDH11Y (protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:HGNC:15813]) HSP 1 Score: 271.552 bits (693), Expect = 1.304e-75 Identity = 239/870 (27.47%), Postives = 404/870 (46.44%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLC----RFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-----FIECPEN--FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTP-RLFSLL-----------------ELIIHVVDGP-SSNPDYAIITN--FRIVLIVIPTLIGISFSVILLFVIKTVQKQKANRL 2642 Y++ EE + +GN++ DL L ++ K L T F + +I + + ++DREKLC R +H CF + +++L E +V IR ++ DINDN P+F I I E A + + ++P A+D D+ +N Y L ++ F + I+ K+ L + LDRE+KD Y++ ++ D G P S ++ L V++ D ND+ P F + I V I E A +G ++ + A D DIG N+K+ FS + L + A F +N +TG I + LDRE + L V+ SD G P + +M L V + D NDN P +I P N ++ EN + + I D D+ + +C + P F+L V F L + LD E+ Y++ +L D G P L+ S ++ I V D+NDN P F +S + + EN ++K+ A+D D G NA++ Y + + F +++ +G L ++ +D E+ + TI KD G P T+ V V+I D ND P V E++P+ V ++V DPD G V++++L + F + + N+ FDRE + Y+ V D G+ ++S +TI + D+NDN+P + P S + + S G + + D+D NA++ Y + + + F + ++GN+ L C V+DLG R+++K D G P LFS++ EL+ ++ P + N + A +++ V I++ + G V+++F+ V+ ++A L Sbjct: 60 YTIREEIPENVLIGNLLKDLNL-SLIPNKSL--TTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEH----------------------CFYEVEVAILP-DEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAIN--SKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI-LQVSVTDTNDNHPVFKETE---IEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFS-NLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMP-ARAMVL-VNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIP---FRLRPVFSNQ-----------FLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKP----VFIVPPYNYSYELVLPSTNP--GTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHL 874
BLAST of Protocadherin-11 X-linked vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]) HSP 1 Score: 269.626 bits (688), Expect = 4.654e-75 Identity = 232/845 (27.46%), Postives = 391/845 (46.27%), Query Frame = 3 Query: 30 VNFRYFFFLYMLVILHFWCIISIKPFATNLLDQIGINFTYSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFE--------LSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY 2522 ++ R F+ L L+ C+ L I Y++ EE + +GNI DL + + + +L + S+A ++ S+ + ++DREKLC +G EN+ CF + + +L + ++ I++IV D NDN P+F P I I E + + IP A D D N Y L N + F + ++ K L Q LDRE+KD Y++ I+ D G P S ++ L V + D+ND++P F + + V I E A +G ++ + A D DIG+N+++++ ++ + F +N +TG I V LDRE + V+ SD S P +T+ + D NDN P I+ +II G + ++ D N LI + S K ++V + +I++ + F + L T+S+LD E +S I+ D+G P L+ + L+ + + D+NDN P F++ E+ V EN + + A+D D G NAD++Y + N F +++ +G L D E ++ T+ +D G+P + A V VT+ D ND P V+E++PK + V ++V D D G V++++L + FV + + +N+ FDRE Y+ V D GQP +++ +TI + D+NDN P ++ SP S + + S G +A ++ D D NA+L Y + + K F + P +GN+ L + +D+G RLV+ + D G P+ L L+ V+ + N Y Sbjct: 1 MDLRDFYLLAALIA----CL--------RLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA-SLVYRLVSKAGDA-PLVKVSSSTGEIFTTSNRIDREKLC-------------AGASYAEENE---CFFELEVVILP-NDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLIN--SRFPIPSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAI-LQVTVSDVNDNRPVFKE---GQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPA-TKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPAR--ATVTINVTDVNDNPPNIDL--RYIISPINGTV----YLSEKD-----PVNTKIALITV----SDKDTDVNGKVICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASF-FDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSP----VVISPPSNTSFKLVPLSAIP--GSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGNASY 783
BLAST of Protocadherin-11 X-linked vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 191.045 bits (484), Expect = 6.415e-49 Identity = 194/692 (28.03%), Postives = 303/692 (43.79%), Query Frame = 3 Query: 501 TIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLT--NHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFI-IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGIN-------ADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFR----NLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKP----YFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY 2522 T+ V V D+ DN PIF+ ++ I+E+ AP S+ A D D N +I Y L N K+ I A I LDRE + + A D G P S ++ + + ++D+ND+ P F+ +S N V I E I IAT+ A D D G N K+ +S+ S + I+ STG + + +D + + + D P S+++ LT+ + D ND+AP + + I +EEN VG + A D DSG P K S E + S + + TT +LDRE + YSL + D G+P L+ S I++++ D NDN P F + + + + E S ++ LKA DND AD F I ++ I SG+L + + HK + + I DQG V+V I D+N P + + + EH P G V TL D D G + ++ ++ FR + ++ + + DRE +S++V D+ P L S + + + DINDN P+ T S+ + S P+G S + D DI N + YF++ES F L SG L+++S L I +D GTP L + E+ + + D + P + Sbjct: 255 TVVVHVLDVQDNSPIFEKDSYFGEIRED-APIGTTVLSV-FARDLDSGENGEIEYSLGEGNGKNLLAIN----AKSGVIQTAAPLDRETLSLIRLDVIASDKGTPKRESTAM-VEITVVDVNDNAPVFASDSYN---VTILENITIPAVIATVKATDEDFGTNGKVHYSM----ASSSGIGGLTIDYSTGEVTLRERIDAK-NSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSG-------------PNGIIKYSMEGSEDFIIDEDSGL----IKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKR------QDHK-VRVEISATDQG--GLQGRCVVNVFIDDVNSA-PYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI---DSSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTS---------SSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTF 892 HSP 2 Score: 173.711 bits (439), Expect = 1.653e-43 Identity = 175/633 (27.65%), Postives = 299/633 (47.24%), Query Frame = 3 Query: 492 IIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGF----IKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVD----HTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF-------RN--LNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESE 2339 + +TI VI DIND+ P I ++E A + + AID+D N I Y + +D +I + I + LDRE +Y + + A D G P SL+ S + V + DIND+ P F K+ N V ISE+ G I T+ A DND + K+ + + E + +++ I + V EL R+ ++ V + + +D G + V I+D N F + P + I E+ S +G+ +KA D D G ++ + +I + F++ + ++S +S LDRE+ +T+S+++ D+ SP L+ S I +++ D NDN P F S++ + E+ +S L++ A D DIG N + YF+ + F +++TSG L +D E+ I + I +D+G+PS + + + +T+ D+ND P+ S + +AE+ P G+ V T+ D D G ++S + + +F +N + +LT EFD E + +GQ L++++ + I +SD+NDN+P L V + N+ + IGF A D +QNA L YF+ E++ Sbjct: 463 VPLTINVI--DINDHAPTLIAAQKMITLEENVAIGEEVGRVY--AIDEDSGPNGIIKYSMEGSED-----FIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTP-SLNTSTTIAVVLKDINDNAPTFDKKEYN---VTISEEMPRGSQIITLKAVDND--EDQKITYRIEEADREVFSI--LDIGDQGAILSVSGELKRQDHK-VRVEISATDQGG--LQGRCVVNVFIDDVNSAPYFNDHPFSVKIPEH----SPIGYPVITLKAEDHDRGDNARI---VYSIDSSQFFRIDPSS--------------GDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQASSGQ--LSSTVPVRIHVSDVNDNKPALKDF-----VILMNRFDNVQMARQIGFIPAF------DPDQNATLEYFLEEND 1041 HSP 3 Score: 148.288 bits (373), Expect = 1.086e-35 Identity = 121/447 (27.07%), Postives = 210/447 (46.98%), Query Frame = 3 Query: 1020 DSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFI-IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVD-HTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLL-TNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYF 2351 DS + F ++ +G I + +DRE+ + L V + P S S + V + D DN+P E F I E+ +TV + A D+DSG + L N ++ KS V + T + LDRE +S L ++ D G+P+ ++ ++ I V D NDN P F ++ + ++EN + + +KA+D D G N + Y + ++ I+ ++G++ E ID ++ IT I KD P+ ++T + + + D+ND P+L++ ++ E++ G V + ID D+GP G + ++ E+ + + L+ T DRE +YS+ V RD G P L S + + + DINDN P ++ S + P G I T+ D+D +Q ++TY I E+++ F Sbjct: 206 DSRSQNLFTLDTMSGEIRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKNLLAIN----------AKSGV----IQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSTGEVTLRERID-AKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDK---------KEYNVTISEEMPRGSQIITLKAVDNDEDQ--KITYRIEEADREVF 626 HSP 4 Score: 117.472 bits (293), Expect = 3.543e-26 Identity = 93/353 (26.35%), Postives = 161/353 (45.61%), Query Frame = 3 Query: 1419 ELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNLEFDREI----NDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRL 2462 E+ +DRE + + L + ++ P +S S + + V D DN P F + ++ ++ E+ ++VL + A D D G N ++ Y + N + IN SG + P+D E I + + D+G+P +TA V +T+ D+ND P S S N ++ E++ V+ T+ D D G G+V ++ + ++ T RE N + ++ +D QP L++++ LTI + DIND+ P L + + I+ IG + +Y D+D N + Y + SE FI+ DSG +K + L + +D GTP L Sbjct: 221 EIRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKNLLAINAKSGVIQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMAS-SSGIGGLTIDYSTGEVTLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLI---------AAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSED--FIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSL 561 HSP 5 Score: 63.1586 bits (152), Expect = 1.076e-9 Identity = 61/269 (22.68%), Postives = 112/269 (41.64%), Query Frame = 3 Query: 1707 FMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF----RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEK-PYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVD 2498 F ++ SG++ + +D E + + + ++ P+ + + V V + D+ D P S + E P GT V ++ D D+G GE+ +L K + ++ + T DRE + VI D G P+ ++ ++ IT+ D+NDN P + ++ I IAT+ D+D N ++ Y + S + +G + L + VI+ +D P L S + L I+V+D Sbjct: 213 FTLDTMSGEIRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKNLLAINAKSGVIQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFAS---------DSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSTGEVTLRERIDAKN-SPITAVIRAKDGAQPALSSTVPLTINVID 471
BLAST of Protocadherin-11 X-linked vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 177.948 bits (450), Expect = 5.894e-45 Identity = 169/627 (26.95%), Postives = 282/627 (44.98%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI------AIDQDIELNAKILYRLTNHKD--KFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPE-NFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENK---FVFR----NLNLLTNLEFDREINDKYSILVI---LRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI 2327 + + V D+NDN P+F ++ + I E +IP A D+D N K+ Y + + TI Y L+ + +D K +I A D +P +LS ++ LT+N+IDIND P + +I+ + E IG+ + ++A D D G N +++S+ E F I++ +G I LDRE L V D G+P + S + V++ D NDNAP + E N I E S + +KA D D + K T + ++ + S I LS + L R++ + I D G L ++++ + D N + P+F+ F +++ E+ V+ LKA D+D G NA ++Y I + F I+ +SGD+ +D E ++ + D SP T+ + V + D+ND P S S +++E +P GT +S ID D GP G V L + +FR + L + + DRE +++++V+ RD G P L+ + +T+T+SD+NDN P L + + + P+G ++ TI D D NA +++ I Sbjct: 2 VEITVVDVNDNAPVFASDSYNVTILENI--------TIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSTGEVTLR----ERID-AKNSPITAVIRAKDGAQP-ALSSTVPLTINVIDINDHAPTLIA-AQKMIT--LEENVAIGEEVGRVYAIDEDSGPNGIIKYSME-------GSEDFIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDE-----------DQKITYRIEEADREVFSILDIGDQGAI---LSVSGELKRQD-HKVRVEISATDQGG--LQGRCVVNVFIDDVN-SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI--DSSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDRE---QFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQL---------SYDLYIAENSPVGSTVGTIVARDADEGDNADISFRI 572 HSP 2 Score: 172.94 bits (437), Expect = 2.620e-43 Identity = 175/633 (27.65%), Postives = 298/633 (47.08%), Query Frame = 3 Query: 492 IIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGF----IKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVD----HTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF-------RN--LNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESE 2339 + +TI VI DIND+ P I ++E A + AID+D N I Y + +D +I + I + LDRE +Y + + A D G P SL+ S + V + DIND+ P F K+ N V ISE+ G I T+ A DND + K+ + + E + +++ I + V EL R+ ++ V + + +D G + V I+D N F + P + I E+ S +G+ +KA D D G ++ + +I + F++ + ++S +S LDRE+ +T+S+++ D+ SP L+ S I +++ D NDN P F S++ + E+ +S L++ A D DIG N + YF+ + F +++TSG L +D E+ I + I +D+G+PS + + + +T+ D+ND P+ S + +AE+ P G+ V T+ D D G ++S + + +F +N + +LT EFD E + +GQ L++++ + I +SD+NDN+P L V + N+ + IGF A D +QNA L YF+ E++ Sbjct: 104 VPLTINVI--DINDHAPTLIAAQKMITLEENVAIGE--EVGRVYAIDEDSGPNGIIKYSMEGSED-----FIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTP-SLNTSTTIAVVLKDINDNAPTFDKKEYN---VTISEEMPRGSQIITLKAVDND--EDQKITYRIEEADREVFSI--LDIGDQGAILSVSGELKRQDHK-VRVEISATDQGG--LQGRCVVNVFIDDVNSAPYFNDHPFSVKIPEH----SPIGYPVITLKAEDHDRGDNARI---VYSIDSSQFFRIDPSS--------------GDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQASSGQ--LSSTVPVRIHVSDVNDNKPALKDF-----VILMNRFDNVQMARQIGFIPAF------DPDQNATLEYFLEEND 682 HSP 3 Score: 170.629 bits (431), Expect = 1.322e-42 Identity = 159/579 (27.46%), Postives = 254/579 (43.87%), Query Frame = 3 Query: 834 LTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFI-IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGIN-------ADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFR----NLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKP----YFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY 2522 + + ++D+ND+ P F+ +S N V I E I IAT+ A D D G N K+ +S+ S + I+ STG + + +D + + + D P S+++ LT+ + D ND+AP + + I +EEN VG + A D DSG P K S E + S + + TT +LDRE + YSL + D G+P L+ S I++++ D NDN P F + + + + E S ++ LKA DND AD F I ++ I SG+L + + HK + + I DQG V+V I D+N P + + + EH P G V TL D D G + ++ ++ FR + ++ + + DRE +S++V D+ P L S + + + DINDN P+ T S+ + S P+G S + D DI N + YF++ES F L SG L+++S L I +D GTP L + E+ + + D + P + Sbjct: 2 VEITVVDVNDNAPVFASDSYN---VTILENITIPAVIATVKATDEDFGTNGKVHYSM----ASSSGIGGLTIDYSTGEVTLRERIDAK-NSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSG-------------PNGIIKYSMEGSEDFIIDEDSGL----IKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKR------QDHK-VRVEISATDQG--GLQGRCVVNVFIDDVNSA-PYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI---DSSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTS---------SSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTF 533 HSP 4 Score: 113.235 bits (282), Expect = 6.593e-25 Identity = 77/279 (27.60%), Postives = 138/279 (49.46%), Query Frame = 3 Query: 1521 LISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVD-HTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLL-TNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYF 2351 ++ I V D NDN P F ++ + ++EN + + +KA+D D G N + Y + ++ I+ ++G++ E ID ++ IT I KD P+ ++T + + + D+ND P+L++ ++ E++ G V + ID D+GP G + ++ E+ + + L+ T DRE +YS+ V RD G P L S + + + DINDN P ++ S + P G I T+ D+D +Q ++TY I E+++ F Sbjct: 1 MVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSTGEVTLRERID-AKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDK---------KEYNVTISEEMPRGSQIITLKAVDNDEDQ--KITYRIEEADREVF 267
BLAST of Protocadherin-11 X-linked vs. Ensembl Celegans
Match: cdh-1 (CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4W0]) HSP 1 Score: 145.206 bits (365), Expect = 1.038e-34 Identity = 146/548 (26.64%), Postives = 245/548 (44.71%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI----AIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNP-SVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFR---NLNLLTNLEFDREINDKYSILVILRDNGQPR 2120 I + + D+NDN PIF + + ++E P + P+ A D D ++ Y + + F+I + PL + ++ +++ A D G S S N+ + +ID + P+FS+ + + +E G I ++ G SK+++S+ D +F I++ TG I+V LD +++++V L + + SN + + I D NDN P F I E+ ++A D D + +I+ P +S ++ FT +LST S+LD E Y L + D G P S++ + I V D NDN P F +S + ++V+EN + V K+ A D D N ++Y ITN F I++ G++Y ID E + I+I +D+G P ++TA +++ D+ND PPS + S+ P V P T + T+ +DPD G G V + FV + ++ L L E + + S VI+ D G PR Sbjct: 627 ISIRLKDVNDNWPIFYPNEYHLTVREGPKPEE------PLLVVSASDMDSGTFGEVSYHILSESSSFSINPV-TGEVFAQKPL------ARGRFHLVVSAKDGGGQSS-ENSANIHITVIDKDTKTPQFSRSKYEIRT---TEDILPGIAIGSV-------GAMSKVKYSIYSGDQD----HNFSIDEDTGKIYVTRYLDADVHDTVLLNIQATLPSG--ESNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSSIEIDQ--------------FTGQLSTGSLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYR-ITNGSEYFGIDEKLGNVYTKRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPPSCL--SITPIVVPAGSPLSTAIGTIVAMDPDKGLNGSVLYRAQLQSSLFVVKSNGDVYLRRQLNASDERHQRLS--VIVSDQGVPR 1125 HSP 2 Score: 136.732 bits (343), Expect = 4.400e-32 Identity = 189/772 (24.48%), Postives = 329/772 (42.62%), Query Frame = 3 Query: 276 ASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKE-EQAPSDWNYQSIPIAIDQD-----------IELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVH-LFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGEL---STVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNLE--FDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLT----HLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYA 2525 A+ K+++++ D S+ L KVD +S S+ I +++ + + F ++++ + E E + I V V+D NDN P F + I E Q + + ++P D D ++ N +++L + K ++ + N LDRE +DKY ++IEA D GKP + G L ++ IID ND+ P FS+ + + +S IG + T+ A D DIG NS++ + + K T + + +F I++S G I L + S H + V+ SD GSP S+S +T+ + ++P ++ +++E N L ST+G I A + + LI +S T ++ Y+ L ILDRE S + L L +G + + +L++I D NDN P +H S I + N+ S L A D D+G N + Y ++ I++ +G ++ ID +I + +D GSP+ +T V + D PP + E P GT + + + G + +L + ++ ++ FD E Y VI + T++ L++I + D+NDN P HL G K +EP+ + D D +++Y I SE F ++P +G + + G F LV+ +D G + + I V+D + P ++ Sbjct: 52 AAPKYFVVFPDEQTSKFL----KVDE-----------RSGEIST--IAHLDYEKRSKFDIVAVKVEESGE---TIDILVEVDDENDNAPSFADQVVKLEISEFAQLGTSF---ALPTVTDGDGPKFDVHRFVILQGNVNNVFKLASRKVNEQLQADLVVN-------GQLDREFRDKYELLIEAQDGGKPAKI-GQLRCSIEIIDANDNAPVFSR---SRYTASVSANISIGSHLITVQATDADIGENSRISYDI--KKTSAPSNSNFAISQS-GVITTTASL---LPASTHDVIVVASDHGSPSLSSSAVVTITVLGSTLSSPPLDI--IWLVESNSAHLMENSTLGSIVARVSIAQQYRDTKLRLIG----SSALCPQQTDQAHVYL---------LLLCGILDRETASEHHLKFLLEKDGQIIIEHPQLLTI--GDINDNAPQWHSSQIHISL--NRTQGGS-RTLTAKDPDLGQNGWIRYSVLDT--ELVSIDKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQDEHLTVDTMSGTVCIQKTFDFEKQKSYQTTVIATNANSE--TSTSLISIRLKDVNDNWPIFYPNEYHLTVREGPK---------PEEPL----LVVSASDMDSGTFGEVSYHIL-SESSSFSINPVTGEVFAQKPLA---RGRFHLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFS 742 HSP 3 Score: 128.257 bits (321), Expect = 1.506e-29 Identity = 175/779 (22.46%), Postives = 312/779 (40.05%), Query Frame = 3 Query: 249 TLTFFPWSQASSKFYMIYKDSANSQKLV----LQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQ-------------EGMIIVT--IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANEL-KIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWE-------NKFVFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVD 2498 T+T + +S +I+ +NS L+ L V R + + Q+ +K ++ S +C + D ++L+ +L+ + +G II+ + + DINDN P + I + Q S A D D+ N I Y + + + + I E +I T+D + + A D G P +LS L + +++D P+F K L V I E IG + + A+++ GN+ ++++SL + EH ++ +G + + D E +S VI ++ S +++ +++ + D NDN P F + + E + + A DMDSG S +++ ++SF ++ VT E + +K + + LV+ D G NS I I V D++ P F RS +EI+ E+ + ++ +G + + Y I + + DH F I++ +G +Y +D + H + + I S T V + I+D ND PP S + S+ E + + D D GEV +++ ++F + L T D E Y + V D G P ++++ L I + D+NDN P S T+ P + + D D +N Q+ Y I + YF + GN+ + + + I +D G P S I V+D Sbjct: 324 TITVLGSTLSSPPLDIIWLVESNSAHLMENSTLGSIVARVSIAQ-QYRDTKLRLIGSSALCPQQTDQAHVYLLLLCGILDRETASEHHLKFLLEKDGQIIIEHPQLLTIGDINDNAPQWHSSQIHISLNRTQGGS-----RTLTAKDPDLGQNGWIRYSVLD------TELVSIDKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSP-ALSTDLQVVADLLDTESKPPQFEKA---LWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQ------DEHLTVDTMSGTVCIQKTFDFEKQKSYQTTVIATNANS--ETSTSLISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILS--ESSSFSINPVTGE--VFAQKPLAR---------------GRFHLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAI-------GSVGAMSKVKYSIYSGDQDHNFSIDEDTGKIYVTRYLDADVHDTVLLNIQATLPSGESNQTQ--VVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSSIEIDQFTGQ---LSTGSLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEK---------SWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITNGSE-YFGIDEKLGNVYTKRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLD 1037 HSP 4 Score: 100.138 bits (248), Expect = 6.786e-21 Identity = 137/622 (22.03%), Postives = 243/622 (39.07%), Query Frame = 3 Query: 654 KILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVT--LESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDG 2501 +I Y L N + T+ + + +T D EK+ Y + A + S S +++ + D+ND+ P F +L + E K + + + A D D G ++ + + L++S + F IN TG + L R + HL V D G NS + + + D++ P F E+ +G + GA S + + ++F + T + T Y+ + T L+ + L SN + I + D NDN P F S EI + E+ ++ASD D N ++ Y II+ + + I+Q +G L +D+E + + + D G P ++ + + + D+ND P V E+ P T+V + D D+ G++ + F + N+ T DRE+ I ++ D G P +++ I++ D+NDN P +S I P+ +I TI D D N + Y + + F++ +G++ L + SD RL + V D G PR + + + + G Sbjct: 574 RIRYSLQNQDEHLTVDTMSGT----VCIQKTFDFEKQKSYQTTVIATNANSETSTS---LISIRLKDVNDNWPIFYPNEYHLT---VREGPKPEEPLLVVSASDMDSGTFGEVSYHI---LSESSS---FSINPVTGEVFAQKPLARGRF---HLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSV-------GAMSKVKYSIYSGDQDHNFSIDEDTGKIYVTRYLDADVHDTVLLNIQATLPSGE------------------SNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSSIEIDQFTGQLSTGSLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITNGSEYFGIDEKLGNVYTKRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPPSC----------LSITPIVVPAGSPLSTAIGTIVAMDPDKGLNGSVLYRA-QLQSSLFVVK-SNGDVYLRRQLNASDERHQRLSVIVSDQGVPRKSVVCHVPVRISKG 1139 HSP 5 Score: 89.3521 bits (220), Expect = 1.290e-17 Identity = 131/574 (22.82%), Postives = 230/574 (40.07%), Query Frame = 3 Query: 840 VNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFR----NLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDS--------GNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY 2522 + I DIND+ P++ ++ IS G + T+ A D D+G N +++S+ + E I+K TG I V N +D I + V D GSP S + + + D P F + I E+ + + + A + G S L N L+ T+ T I+K+ F E +Y ++ + S +++ LISI + D NDN P F+ + + + V E +L + ASD D G ++ Y I++ +F IN +G+++ +P+ R + + KD G S +A +H+T+ D + P E + G + ++ G +V ++ + F + D +++D ++L+ ++ +N + I I D NDN P+ + + V+IS + EP + D D +N ++ Y I S HP S G L S +++L +K D G P S + L IHV+D + P++ Sbjct: 429 LTIGDINDNAPQWHSSQIH-----ISLNRTQGGS-RTLTAKDPDLGQNGWIRYSVLD-------TELVSIDKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQN----QDEHLTVDTMSGTVCIQKTFDF------------EKQKSYQTTVIATNANSE--TSTSLISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILSE-SSSFSINPVTGEVFAQKPLARGR---FHLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSV-------GAMSKVKYSIYSGDQDHNFSIDEDTGKIYVTRYLDADVHD--TVLLNIQATLPSGESNQTQVVIFIEDHNDNPPQFSSSL----VEISIRE-DLKLHEP----FYVVQASDKDKKKNGEVRYSIISS-------HPGSSIEIDQFTGQLSTGSLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEF 942 HSP 6 Score: 80.4925 bits (197), Expect = 6.294e-15 Identity = 77/300 (25.67%), Postives = 133/300 (44.33%), Query Frame = 3 Query: 1677 YFIITNVDHT---FMINQTSGDLYQIEPIDFERHKQITI-TIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWEN-----KFVFRNLN------LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAII 2531 YF++ + T +++ SG++ I +D+E+ + I + ++ G T + V + D ND PS + ++E GT +V D D GP +V ++ N K R +N L+ N + DRE DKY +L+ +D G+P + +I I D NDN P + S T S S IG + T+ D DI +N++++Y I ++ P S + + +T S+ + +++ D+G+P L S + I V+ S+P II Sbjct: 56 YFVVFPDEQTSKFLKVDERSGEISTIAHLDYEKRSKFDIVAVKVEESGE-----TIDILVEVDDENDNAPSFADQVVKLEISEFAQLGTSFALPTVTDGD-GPKFDVHRFVILQGNVNNVFKLASRKVNEQLQADLVVNGQLDREFRDKYELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSR---------SRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSNSNFAISQSGVITTTASLLPASTHDVIVVASDHGSPSLSSSAVVTITVLGSTLSSPPLDII 340 HSP 7 Score: 73.9442 bits (180), Expect = 6.462e-13 Identity = 176/746 (23.59%), Postives = 284/746 (38.07%), Query Frame = 3 Query: 324 KLVLQKKVDREKLCRFQHTLSKSKIFSS-GCICNMENDNKICFMLISLSLLEFQEGMIIV------------TIRVIVNDINDNPPIFQLPNFT---IMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRF-SKESLNLIS----VFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLY-QIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDV-PPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALL-----PWENKF--VFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFI-LHPDSGNLKLN--STCSVSDL--GSFRLVIKVQDNGTP 2456 K +L + E RFQ K I S+ G I + D + QE ++I+ T+RV V D NDN P QL T + I E D ++ A D DI N K + L ++ + +L + L +L K I + +D G P L + N ++I++ P+ +K L + I E GQ IA + + L +S+ E DS F S G I ELDREI E L VI + G + + V +N+ NDN P + + EN S V + A D+D N+ P F +S+ + ++ T+ FT + T+ LD E + ++L I D +N ++I VSD NDN P F + ++ V + K +D+ L Y + F + SG L+ ++ P ER+ +T+ D G PSF+T+ V V I + P V E+ G + LS GE S P +K + + L DRE + V + + + + D NDN P T + +S G I I D D +N +++Y I + L+PD+G+++LN + + + +++++++ +D+G P Sbjct: 1651 KRILATGMTEESRFRFQGNAPKFSINSTTGSISVLPLDREAS-----------QEHLLIIILTDGGSRNDSCTVRVTVADQNDNKP--QLDASTPSELEIAESSRVGDVLHRF--RASDMDIGQNGKFSFELLEDSSG-SLDLVPETGDLVLRRLSSLQSWK-----IKLRVVDHGVP-----GLYVEKN-LEISNRNPQTEAKAPLEFLKQTYLSTIDEGLPRGQFIAKLQPE------LAGLTYSIVEGNIDSA-----FSVDSEGVIRTNLELDREILERYSLKVIGTGSG---QQIGTRVDVRVNNLNDNVPSFPMSKPRRVPENLRVGSYVATVGAKDVD------------NLAPLRYFLVSDSSGQTPTHFNID-QFTGTIHLTAPLDFEVLPEHTLTIKATDGSFDTFTN---LTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFA-KIEAHDLDARGALTYSLGQGSSSIFRVAPESGALFMKVLPPAGERY---LVTVTATDNGVPSFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMENSKIGLQIGNLS---------GEESREFHYRIQDPEASKIFSIDKFGRLFVAGPIDREQRATHEFQVEIDNEMMTSQKVQCKCHVIVLDENDNLPVFTSVA---------YYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRILSGNDLNIVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHP 2317 HSP 8 Score: 68.1662 bits (165), Expect = 3.229e-11 Identity = 61/220 (27.73%), Postives = 104/220 (47.27%), Query Frame = 3 Query: 498 VTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRS 1157 +T+ + V D+NDN P F+ +T+ + E P +A D+D N +I+YR+TN + F I ++ N + +++DRE I I A D G P S + + ++++D+ND+ P L++ + + + + I TI A D D G N + L + F+ KS G +++ +L+ L VIVSD G P +S Sbjct: 926 MTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPK--TIVGKVVARDKDSLENGQIVYRITNGSEYFGIDE-KLGN---VYTKRSIDREVISHVDISIVAEDKGVPPR-SSTASARISVLDVNDNPP----SCLSITPIVVPAGSPLSTAIGTIVAMDPDKGLNGSV-------LYRAQLQSSLFVVKSNGDVYLRRQLNASDERHQRLSVIVSDQGVPRKS 1127 HSP 9 Score: 66.2402 bits (160), Expect = 1.237e-10 Identity = 127/532 (23.87%), Postives = 221/532 (41.54%), Query Frame = 3 Query: 402 SSGCI-CNMENDNKICFMLISLSLLEFQEGMIIVT-IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAID-QDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQT-LDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQA-KIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIIND-ENDNAPFIECPE-NFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSF---KLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVD-HTFMINQTSGDL----YQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIK--DMNDVPPSLVSYSMNPSVAEHMPKGTVVQTL 1946 S G I N+E D +I SL ++ G I T + V VN++NDN P F M K + P + S + +D++ A + Y L + T + I L LD E ++ + I+A D G D+ + NLT+ + DIND+ P FSK L +S GQ A I AHD D L +SL + + F + +GA+ + ++ E + V +D G P S S+ ++VII + E + P E E F + EN S +G ++ ++ S + + + + F K + + ++ F++ +D E +++ + CH ++V D+NDN+P F + + + ++ + + ++ ASD D G N + Y I++ D + +N +G + + +D + I + +D G P+ V V++K + P V V E GTV+Q + Sbjct: 1878 SEGVIRTNLELDREI-LERYSLKVIGTGSGQQIGTRVDVRVNNLNDNVPSFP------MSKPRRVPENLRVGSYVATVGAKDVDNLAPLRYFLVSDSSGQTPTHFNIDQFTGTIHLTAPLDFEVLPEHTLTIKATD-GSFDTFT---NLTIFVSDINDNAPTFSKP---LYQTTVSPATFSPGQPFAKIEAHDLDA--RGALTYSLGQG-----SSSIFRVAPESGALFM--KVLPPAGERYLVTVTATDNGVPSFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMEN----SKIG-LQIGNLSGEESREFHYRIQDPEASKIFSIDKFGRLFVAGPIDREQRATHEFQVE----IDNEMMTSQKVQCKCH--------------VIVLDENDNLPVFTSVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRILSGNDLNIVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPFFVLPVYEVHVLEDTSVGTVLQKI 2363 HSP 10 Score: 54.299 bits (129), Expect = 6.295e-7 Identity = 37/139 (26.62%), Postives = 69/139 (49.64%), Query Frame = 3 Query: 2049 LEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLF 2465 L DRE + ++ +++IL D G +S + +T++D NDN+P+L S + + +G + D DI QN + ++ + E L P++G+L L +S L S+++ ++V D+G P L+ Sbjct: 1685 LPLDREASQEHLLIIILTDGGS--RNDSCTVRVTVADQNDNKPQLDASTPS--------ELEIAESSRVGDVLHRFRASDMDIGQNGKFSFELLEDSSGSLDLVPETGDLVLR---RLSSLQSWKIKLRVVDHGVPGLY 1810
BLAST of Protocadherin-11 X-linked vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]) HSP 1 Score: 114.005 bits (284), Expect = 3.655e-25 Identity = 147/591 (24.87%), Postives = 255/591 (43.15%), Query Frame = 3 Query: 498 VTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIG-NNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESV---HLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFI--IEENRGELSTVGF----IKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVI--LCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMI------NQTS-GDLYQIEPIDFER-------HKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALL--PWENKFVFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSI---LLTITISDINDNRP 2177 V +++++ND+NDN P F+ + +KE + + I I D++ ++ + Y L I + + I + LD E D+Y +++ A D G+ ++ + N+ ++I D+ND+ P+F E + I E I + + + A D D +S++ + L + D E F I K +G I + LDR+ V + V D + V + D NDN+P PE IEENR + + G ++A D D + N + + ++ KL N ES I ++ F + + LDRE S +I +D G P ++I V+D NDN PFF ++ +E V E ++V+ A D D ++ + ++ F + Q+S G L +P+D+E H I ++ G D A VHV + D ND P + + + V E +P+GT + + D D G + P + ++ L DRE Y++++ DN +N+I ++ + + D+NDN P Sbjct: 1319 VKVQIVINDVNDNAPSFEEQKYIGRVKESEGEG---HDVITIKA-HDLDKHSNLRYHLIGAGGG-RIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASD-GRHNATT---NVYIHIEDVNDNAPQF--EQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGAD----EVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIF--PERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRN----KLING--ESVFRIDQNTGKIFAMRS---LDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHD-------AEAAVHVALVDRNDHAPHIHGATEH-RVREDVPRGTSIGRYTATDRDAGDTARFRINRQSDPKRQFTIDQDGTLRVAHTLDREDIAVYNLIIEAYDN-----SNNIGRQMVAVYLQDVNDNGP 1870 HSP 2 Score: 101.293 bits (251), Expect = 2.911e-21 Identity = 171/709 (24.12%), Postives = 290/709 (40.90%), Query Frame = 3 Query: 567 IMIKEEQAPSDWNYQSIP-----IAIDQDIELNAKIL----------------YRLT---NHKDKFTIKYIQI-----ANE-LKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKI--------GQTIATIFAHDNDI-GNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSD-------CGSPPRSNSMALTVIINDENDNAPFIECPENFI--IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVL-KLKASDNDIGINADLLYFII--TNVDHTFMINQTSGDLYQIEPIDFERHKQI---TITIGCKDQGSPSFTTTAYVHVTIKDMND----VPPSLVSYSMNPSVAEHMPKGTV---VQTLSVIDPDTGPG----GEVSVALLPWENKFVFR----NLNLLTNLEFDREINDKYSILVILR--DNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATI-YFHDDDINQNAQLTYFIHESEKPYFILHPDS-------GNLKLNSTCSVSDL---GSFRLVIKVQDN 2447 ++ K+++AP +Q+ P I +D+++ELN IL Y+LT +K K+ Q NE +++ ++ LD E+ + Y + + A D ++ + V + D+ND P+F+ ++L + I E+ G+ I T+ A D D G +++ + + + + +HF I++ TG I + DRE + L V SD + P +++ + ++IND NDNAP E + +I ++E+ GE V IKA D+D SN LI T T ++K+ LD E Y LV++ D R + + + I + D NDN P F + + V+E V++ VL + A+D D + + + + D F I + SG + ++ +D + + + D A V V ++D+ND P L Y H G VQ DP T G V L+ E+ VFR + DREI+ + ++ +R D G P +TI ++D+NDN +P + + S PIG ++ + F D+ ++ TY + E E YF + D G L++ D+ F L I+V D Sbjct: 1083 VLDKQQKAPK---WQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTS--RVASTKTFVVEVRDVNDVVPQFT---VDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGE-ANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFE-EQKYIGRVKESEGEGHDVITIKAHDLDK--HSNLRYHLIGAG-GGRIPFGVRTDSGTIFVKEP------------LDFEASDQYHLVLIASDG---RHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREPIHS-DGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGES--VFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDN---------APFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSE-ESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDG 1750 HSP 3 Score: 95.9005 bits (237), Expect = 1.303e-19 Identity = 127/494 (25.71%), Postives = 226/494 (45.75%), Query Frame = 3 Query: 480 QEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKY-IQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDS-YAMEHFFINKSTGAIHVWNELDR----EIYESVHLFVIVSDCGS----PPRSNSMALTVIIN--DENDNAP-FIECPENFIIEE-----NRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFI----------ITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSP-SFTTTAYVHVTIKDMNDVPP 1874 +E + +TIR+ +D+NDN P F P +T ++E+ P + + A+D+D N++I Y + NH F+I +I+ ++++ Q E+ Y + A D G+P SLS S + + + ND F S + F++E A+ G + I A D D ++ +S +K S M F I++ TG + + + + E ++L VIV D GS P ++++ T++I D N+N P F +C + I + + + T+ ++A D DS A+ + L + + + ++ +++ V T S + DRE + + D G L S+ V D NDN P F R ++E V + +SV+ + A DND NA++ Y + ++D ++N+ SG++ I+PI + K I I D G P + ++A V + + D P Sbjct: 622 RESHVDLTIRI--DDVNDNVPTFTRPLYTAQVRED-IPLNQTILKV-TAVDKDTGDNSRITYSVDNHN--FSINSNGEISAKVRLDADQL--NERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQ--YTAFVAEDAQGGTPVIQIQARDAD---RDEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSL--------YYTQSESRKAFVIDRQTGVLT--PSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQKFIFNVI-ADDNGIPEALQSSAQVTLNVLDKQQKAP 1091 HSP 4 Score: 92.4337 bits (228), Expect = 1.541e-18 Identity = 175/730 (23.97%), Postives = 308/730 (42.19%), Query Frame = 3 Query: 501 TIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDR------EKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDI--NDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHD----NDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECP-ENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSP-RLSNSKLISILVSDQNDNIP-FFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLY-FIITNVDHT-----FMINQTSGDL---YQIEPIDF-ERHKQITITIGCKDQGS----PSFTTTAYVH--VTIKDMNDVPPSLVSYSMNPSVAEHMPKGT------VVQTLSVIDPDTGPGGEVSVALL--PWENKFVF---RNLNLLT---NLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI---------HESEKPYF-ILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPR-LFSLLELIIHVVDGPSSNPDY 2522 TIR+ V DI D PP F ++ P+ +A D+ + ++ +LY+ TI I A + P + R E+ D Y I +A+D D+ + L+ V I++I ++ P+F+K+ V +SE + ++ + A D + + +SL E T + F I+ STG IH+ LD + L + R + + LT+ I+D NDN P P + E+ T+ + A D D+G +S + + N N ++ S I + L + +R + Y + D+G P LS+S +I I + ND F S + V E+ + V++++A D D ++ Y F+ N T F I++ +G + + + D E I +T+ +D GS PS T T+Y + I+D+N+ P + +A+ M +GT + + D D+ G++ +L E++ F R +LT ++ FDRE + + V D G L ++ + DINDN P+ + S +T S S E +G S+ T++ D+D NA++TY + H+++ +F +++ SG + L + F + DNG P L S ++ ++V+D P + Sbjct: 408 TIRIHVADI-DEPPSFVNSPLPMLAVVPLNPTIGRIVYQFVARDEHGDGDSNVLYK--------TIDVIP-AGSFIVDPKSGVVRTGWSKYERGDTYRISAQAMDLSPSDNTTSQLS-EVAILEILADERPPQFAKQEY---EVTVSEDNLVDYSVVDVKAQSFRSFEDGRSKGPITYSL-EGDTPEDETKWFRIDPSTGIIHLTRLLDFDDPALPKLHKLKVTAREDNRESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDTGDNSRITYSVDN---------HNFSINSNGEISAKV----RLDADQLNERHFV--YRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDAD---RDEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIM-EGTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFE--------RPSYET-SVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMK-TQKFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKW 1093
BLAST of Protocadherin-11 X-linked vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]) HSP 1 Score: 114.005 bits (284), Expect = 3.655e-25 Identity = 147/591 (24.87%), Postives = 255/591 (43.15%), Query Frame = 3 Query: 498 VTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIG-NNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESV---HLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFI--IEENRGELSTVGF----IKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVI--LCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMI------NQTS-GDLYQIEPIDFER-------HKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALL--PWENKFVFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSI---LLTITISDINDNRP 2177 V +++++ND+NDN P F+ + +KE + + I I D++ ++ + Y L I + + I + LD E D+Y +++ A D G+ ++ + N+ ++I D+ND+ P+F E + I E I + + + A D D +S++ + L + D E F I K +G I + LDR+ V + V D + V + D NDN+P PE IEENR + + G ++A D D + N + + ++ KL N ES I ++ F + + LDRE S +I +D G P ++I V+D NDN PFF ++ +E V E ++V+ A D D ++ + ++ F + Q+S G L +P+D+E H I ++ G D A VHV + D ND P + + + V E +P+GT + + D D G + P + ++ L DRE Y++++ DN +N+I ++ + + D+NDN P Sbjct: 1319 VKVQIVINDVNDNAPSFEEQKYIGRVKESEGEG---HDVITIKA-HDLDKHSNLRYHLIGAGGG-RIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASD-GRHNATT---NVYIHIEDVNDNAPQF--EQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGAD----EVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIF--PERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRN----KLING--ESVFRIDQNTGKIFAMRS---LDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHD-------AEAAVHVALVDRNDHAPHIHGATEH-RVREDVPRGTSIGRYTATDRDAGDTARFRINRQSDPKRQFTIDQDGTLRVAHTLDREDIAVYNLIIEAYDN-----SNNIGRQMVAVYLQDVNDNGP 1870 HSP 2 Score: 101.293 bits (251), Expect = 2.911e-21 Identity = 171/709 (24.12%), Postives = 290/709 (40.90%), Query Frame = 3 Query: 567 IMIKEEQAPSDWNYQSIP-----IAIDQDIELNAKIL----------------YRLT---NHKDKFTIKYIQI-----ANE-LKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKI--------GQTIATIFAHDNDI-GNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSD-------CGSPPRSNSMALTVIINDENDNAPFIECPENFI--IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVL-KLKASDNDIGINADLLYFII--TNVDHTFMINQTSGDLYQIEPIDFERHKQI---TITIGCKDQGSPSFTTTAYVHVTIKDMND----VPPSLVSYSMNPSVAEHMPKGTV---VQTLSVIDPDTGPG----GEVSVALLPWENKFVFR----NLNLLTNLEFDREINDKYSILVILR--DNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATI-YFHDDDINQNAQLTYFIHESEKPYFILHPDS-------GNLKLNSTCSVSDL---GSFRLVIKVQDN 2447 ++ K+++AP +Q+ P I +D+++ELN IL Y+LT +K K+ Q NE +++ ++ LD E+ + Y + + A D ++ + V + D+ND P+F+ ++L + I E+ G+ I T+ A D D G +++ + + + + +HF I++ TG I + DRE + L V SD + P +++ + ++IND NDNAP E + +I ++E+ GE V IKA D+D SN LI T T ++K+ LD E Y LV++ D R + + + I + D NDN P F + + V+E V++ VL + A+D D + + + + D F I + SG + ++ +D + + + D A V V ++D+ND P L Y H G VQ DP T G V L+ E+ VFR + DREI+ + ++ +R D G P +TI ++D+NDN +P + + S PIG ++ + F D+ ++ TY + E E YF + D G L++ D+ F L I+V D Sbjct: 1083 VLDKQQKAPK---WQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTS--RVASTKTFVVEVRDVNDVVPQFT---VDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGE-ANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFE-EQKYIGRVKESEGEGHDVITIKAHDLDK--HSNLRYHLIGAG-GGRIPFGVRTDSGTIFVKEP------------LDFEASDQYHLVLIASDG---RHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREPIHS-DGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGES--VFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDN---------APFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSE-ESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDG 1750 HSP 3 Score: 95.9005 bits (237), Expect = 1.303e-19 Identity = 127/494 (25.71%), Postives = 226/494 (45.75%), Query Frame = 3 Query: 480 QEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKY-IQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDS-YAMEHFFINKSTGAIHVWNELDR----EIYESVHLFVIVSDCGS----PPRSNSMALTVIIN--DENDNAP-FIECPENFIIEE-----NRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFI----------ITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSP-SFTTTAYVHVTIKDMNDVPP 1874 +E + +TIR+ +D+NDN P F P +T ++E+ P + + A+D+D N++I Y + NH F+I +I+ ++++ Q E+ Y + A D G+P SLS S + + + ND F S + F++E A+ G + I A D D ++ +S +K S M F I++ TG + + + + E ++L VIV D GS P ++++ T++I D N+N P F +C + I + + + T+ ++A D DS A+ + L + + + ++ +++ V T S + DRE + + D G L S+ V D NDN P F R ++E V + +SV+ + A DND NA++ Y + ++D ++N+ SG++ I+PI + K I I D G P + ++A V + + D P Sbjct: 622 RESHVDLTIRI--DDVNDNVPTFTRPLYTAQVRED-IPLNQTILKV-TAVDKDTGDNSRITYSVDNHN--FSINSNGEISAKVRLDADQL--NERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQ--YTAFVAEDAQGGTPVIQIQARDAD---RDEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSL--------YYTQSESRKAFVIDRQTGVLT--PSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQKFIFNVI-ADDNGIPEALQSSAQVTLNVLDKQQKAP 1091 HSP 4 Score: 92.4337 bits (228), Expect = 1.541e-18 Identity = 175/730 (23.97%), Postives = 308/730 (42.19%), Query Frame = 3 Query: 501 TIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDR------EKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDI--NDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHD----NDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECP-ENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSP-RLSNSKLISILVSDQNDNIP-FFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLY-FIITNVDHT-----FMINQTSGDL---YQIEPIDF-ERHKQITITIGCKDQGS----PSFTTTAYVH--VTIKDMNDVPPSLVSYSMNPSVAEHMPKGT------VVQTLSVIDPDTGPGGEVSVALL--PWENKFVF---RNLNLLT---NLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI---------HESEKPYF-ILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPR-LFSLLELIIHVVDGPSSNPDY 2522 TIR+ V DI D PP F ++ P+ +A D+ + ++ +LY+ TI I A + P + R E+ D Y I +A+D D+ + L+ V I++I ++ P+F+K+ V +SE + ++ + A D + + +SL E T + F I+ STG IH+ LD + L + R + + LT+ I+D NDN P P + E+ T+ + A D D+G +S + + N N ++ S I + L + +R + Y + D+G P LS+S +I I + ND F S + V E+ + V++++A D D ++ Y F+ N T F I++ +G + + + D E I +T+ +D GS PS T T+Y + I+D+N+ P + +A+ M +GT + + D D+ G++ +L E++ F R +LT ++ FDRE + + V D G L ++ + DINDN P+ + S +T S S E +G S+ T++ D+D NA++TY + H+++ +F +++ SG + L + F + DNG P L S ++ ++V+D P + Sbjct: 408 TIRIHVADI-DEPPSFVNSPLPMLAVVPLNPTIGRIVYQFVARDEHGDGDSNVLYK--------TIDVIP-AGSFIVDPKSGVVRTGWSKYERGDTYRISAQAMDLSPSDNTTSQLS-EVAILEILADERPPQFAKQEY---EVTVSEDNLVDYSVVDVKAQSFRSFEDGRSKGPITYSL-EGDTPEDETKWFRIDPSTGIIHLTRLLDFDDPALPKLHKLKVTAREDNRESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDTGDNSRITYSVDN---------HNFSINSNGEISAKV----RLDADQLNERHFV--YRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDAD---RDEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIM-EGTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFE--------RPSYET-SVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMK-TQKFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKW 1093
BLAST of Protocadherin-11 X-linked vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0304900) HSP 1 Score: 211.46 bits (537), Expect = 2.984e-55 Identity = 196/706 (27.76%), Postives = 319/706 (45.18%), Query Frame = 3 Query: 501 TIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI-AIDQDIELNAKILYRLTNHKDKFTIKYIQIANELK-------IAPLQTLDREKKDKYLIIIEAIDCGKPDS--LSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIG---QTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGF----IKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSG-DLYQI-EPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVAL-------LPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHES--EKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYA 2525 T++V V D ND+ P F+ F I+E I + A DQDI NA+I Y + D + Q + I+ +LDRE D Y +++ A D S + + ++ V ++D ND+ P+FS+ + +V + E G T+A I A D D GNN+ +++++ T S F I+ +G + + LD E S L + D GSP RSN+ L V + D NDNAP + +E+ E VG+ ++A+D D GA++ + + + ++F L+ T +++ T LDRE ++ ++ D G P S S + I V D NDN P F+ +E V E++ + V + A+D D ++ L Y I T N F I +G L I + +D+++ K+ +T+ D G S TA VH+ I D N+ P + + SV E P GT V +S D D G +++ +L L + F + ++TN DRE Y + V +D G P L+++ + I ++D+NDN +P K S +G S+ + D D+ N ++ Y + + E F++ P SG ++ N + F L D G+P L S +E+ I + D S P +A Sbjct: 449 TLQVNVLDCNDHSPTFEAEQFEASIREGATVGS---TVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY---TVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQS----QFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQ---FQESVLENVPVGYNIIRVQAYDSDEGANAEITYSI--SERDDNFPLA--VDPRTGWVQ----------TIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRS--DTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDN---------APAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFA 1114 HSP 2 Score: 210.69 bits (535), Expect = 5.051e-55 Identity = 179/700 (25.57%), Postives = 320/700 (45.71%), Query Frame = 3 Query: 507 RVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQ-TLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEH------FFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPP---RSNSMALTVIINDENDNAP-FIECPENFIIEENR---GELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDH-TFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN---LLT---NLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHE-------SEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY 2522 R + ++ + P F+ + + EEQ ++ +D E ++ ++Y + + D + ++ + + +LDRE D + + A D P SG+ L VN++D ND P F E I E A +G T+ T+ A D DIG N+++++ + E +TD + F I+ +G I + LDRE +S HL V +D S R+ + ++ V + D+NDN P F E + E++ E +TV I+A D D G ++ +I + F + +++ ++S LD E++ +Y LVI D GSP SN+ + + V D NDN P F+ S F+ V+EN ++++++A D+D G NA++ Y I D+ ++ +G + I+P+D E + + KD G P + ++ V +T++D+ND P+ +V E P GT V T++ DPD + +F + N L+T +L++ +E ++ + V D+G T ++ I I+D N+ P + + + S P+G ++ + D D+ NAQ+TY ++E S P F ++P +G + N+ + L + +D G P L ++ I V D + P + Sbjct: 346 RRVRRELRNQSPYFEQALYVASVLEEQPAG----AAVTTVRARDPE-DSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPR-SGTTTLQVNVLDCNDHSPTFEAEQF---EASIREGATVGSTVITLRATDQDIGKNAEIEYGI-EAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMS--------------GDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQE--KRFLLTVAATDSGGRSDTATV--HINITDANNFAPIFEN---------APYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDP-FSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAF 1007 HSP 3 Score: 188.734 bits (478), Expect = 4.373e-48 Identity = 193/751 (25.70%), Postives = 328/751 (43.68%), Query Frame = 3 Query: 384 SKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVT--IRVIVNDINDNPPIFQLPNFTIMIKEEQ-APSDWNYQSIPIAIDQDIELNAKILYRLT--NHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGEL----STVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFI-------ITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPW---ENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI---HESEKPYFILHPDSGNLKLNSTCSV---SDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNP---DYAII-TNFR 2543 S+S + S+ + E + ++ + L Q T ++V V D NDN P F +T+ + E+Q ++ N + A D D NA I Y + N + +F+I + ++ ++ LD E Y ++I A D G P S S + L VN+ID ND+ PRF + E +G I + A+D+D G N+++ +S++E+ D++ + ++ TG + LDRE V+ D G PP+S S ++ + + D NDN P P+ + E N GE + V + A D D S ++ F +++ I +S LD + + L + D+G S++ + I ++D N+ P F + + V E+ ++VL + A+D+D+G+NA + Y + + + D F IN +G + P+D E +T+ KD G+PS + T V + + D+ND P+ S S+ E GT V ++ DPD G G + L + FV + + TN DRE + + I D G P L++++ + I + D+ND+ P T+ P+G + I+ HD D NA + Y I +S + P S +L + + S F LV++ +P L + + I V D + P D+ +I NFR Sbjct: 525 SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMS----GDVSLVKPLDYESVRSYRLVIRAQDGGSP-SRSNTTQLLVNVIDANDNAPRFYTSQFQ---ESVLENVPVGYNIIRVQAYDSDEGANAEITYSISER-DDNFPLA---VDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFN-PKYY--EANVGEDQPPGTPVTTVTATDPDE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQS------------LDYKQEKRFLLTVAATDSGGR--SDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPD-PFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFAS---------DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVRA---ASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFR 1231
BLAST of Protocadherin-11 X-linked vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0304899) HSP 1 Score: 211.46 bits (537), Expect = 3.256e-55 Identity = 196/706 (27.76%), Postives = 319/706 (45.18%), Query Frame = 3 Query: 501 TIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI-AIDQDIELNAKILYRLTNHKDKFTIKYIQIANELK-------IAPLQTLDREKKDKYLIIIEAIDCGKPDS--LSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIG---QTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGF----IKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSG-DLYQI-EPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVAL-------LPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHES--EKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYA 2525 T++V V D ND+ P F+ F I+E I + A DQDI NA+I Y + D + Q + I+ +LDRE D Y +++ A D S + + ++ V ++D ND+ P+FS+ + +V + E G T+A I A D D GNN+ +++++ T S F I+ +G + + LD E S L + D GSP RSN+ L V + D NDNAP + +E+ E VG+ ++A+D D GA++ + + + ++F L+ T +++ T LDRE ++ ++ D G P S S + I V D NDN P F+ +E V E++ + V + A+D D ++ L Y I T N F I +G L I + +D+++ K+ +T+ D G S TA VH+ I D N+ P + + SV E P GT V +S D D G +++ +L L + F + ++TN DRE Y + V +D G P L+++ + I ++D+NDN +P K S +G S+ + D D+ N ++ Y + + E F++ P SG ++ N + F L D G+P L S +E+ I + D S P +A Sbjct: 449 TLQVNVLDCNDHSPTFEAEQFEASIREGATVGS---TVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY---TVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQS----QFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQ---FQESVLENVPVGYNIIRVQAYDSDEGANAEITYSI--SERDDNFPLA--VDPRTGWVQ----------TIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRS--DTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDN---------APAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFA 1114 HSP 2 Score: 210.69 bits (535), Expect = 5.416e-55 Identity = 179/700 (25.57%), Postives = 320/700 (45.71%), Query Frame = 3 Query: 507 RVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQ-TLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEH------FFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPP---RSNSMALTVIINDENDNAP-FIECPENFIIEENR---GELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDH-TFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN---LLT---NLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHE-------SEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY 2522 R + ++ + P F+ + + EEQ ++ +D E ++ ++Y + + D + ++ + + +LDRE D + + A D P SG+ L VN++D ND P F E I E A +G T+ T+ A D DIG N+++++ + E +TD + F I+ +G I + LDRE +S HL V +D S R+ + ++ V + D+NDN P F E + E++ E +TV I+A D D G ++ +I + F + +++ ++S LD E++ +Y LVI D GSP SN+ + + V D NDN P F+ S F+ V+EN ++++++A D+D G NA++ Y I D+ ++ +G + I+P+D E + + KD G P + ++ V +T++D+ND P+ +V E P GT V T++ DPD + +F + N L+T +L++ +E ++ + V D+G T ++ I I+D N+ P + + + S P+G ++ + D D+ NAQ+TY ++E S P F ++P +G + N+ + L + +D G P L ++ I V D + P + Sbjct: 346 RRVRRELRNQSPYFEQALYVASVLEEQPAG----AAVTTVRARDPE-DSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPR-SGTTTLQVNVLDCNDHSPTFEAEQF---EASIREGATVGSTVITLRATDQDIGKNAEIEYGI-EAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMS--------------GDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQE--KRFLLTVAATDSGGRSDTATV--HINITDANNFAPIFEN---------APYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDP-FSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAF 1007 HSP 3 Score: 188.734 bits (478), Expect = 4.768e-48 Identity = 193/751 (25.70%), Postives = 328/751 (43.68%), Query Frame = 3 Query: 384 SKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVT--IRVIVNDINDNPPIFQLPNFTIMIKEEQ-APSDWNYQSIPIAIDQDIELNAKILYRLT--NHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGEL----STVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFI-------ITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPW---ENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI---HESEKPYFILHPDSGNLKLNSTCSV---SDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNP---DYAII-TNFR 2543 S+S + S+ + E + ++ + L Q T ++V V D NDN P F +T+ + E+Q ++ N + A D D NA I Y + N + +F+I + ++ ++ LD E Y ++I A D G P S S + L VN+ID ND+ PRF + E +G I + A+D+D G N+++ +S++E+ D++ + ++ TG + LDRE V+ D G PP+S S ++ + + D NDN P P+ + E N GE + V + A D D S ++ F +++ I +S LD + + L + D+G S++ + I ++D N+ P F + + V E+ ++VL + A+D+D+G+NA + Y + + + D F IN +G + P+D E +T+ KD G+PS + T V + + D+ND P+ S S+ E GT V ++ DPD G G + L + FV + + TN DRE + + I D G P L++++ + I + D+ND+ P T+ P+G + I+ HD D NA + Y I +S + P S +L + + S F LV++ +P L + + I V D + P D+ +I NFR Sbjct: 525 SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMS----GDVSLVKPLDYESVRSYRLVIRAQDGGSP-SRSNTTQLLVNVIDANDNAPRFYTSQFQ---ESVLENVPVGYNIIRVQAYDSDEGANAEITYSISER-DDNFPLA---VDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFN-PKYY--EANVGEDQPPGTPVTTVTATDPDE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQS------------LDYKQEKRFLLTVAATDSGGR--SDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPD-PFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFAS---------DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVRA---ASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFR 1231
BLAST of Protocadherin-11 X-linked vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0300578) HSP 1 Score: 211.46 bits (537), Expect = 3.256e-55 Identity = 196/706 (27.76%), Postives = 319/706 (45.18%), Query Frame = 3 Query: 501 TIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI-AIDQDIELNAKILYRLTNHKDKFTIKYIQIANELK-------IAPLQTLDREKKDKYLIIIEAIDCGKPDS--LSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIG---QTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGF----IKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSG-DLYQI-EPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVAL-------LPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHES--EKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYA 2525 T++V V D ND+ P F+ F I+E I + A DQDI NA+I Y + D + Q + I+ +LDRE D Y +++ A D S + + ++ V ++D ND+ P+FS+ + +V + E G T+A I A D D GNN+ +++++ T S F I+ +G + + LD E S L + D GSP RSN+ L V + D NDNAP + +E+ E VG+ ++A+D D GA++ + + + ++F L+ T +++ T LDRE ++ ++ D G P S S + I V D NDN P F+ +E V E++ + V + A+D D ++ L Y I T N F I +G L I + +D+++ K+ +T+ D G S TA VH+ I D N+ P + + SV E P GT V +S D D G +++ +L L + F + ++TN DRE Y + V +D G P L+++ + I ++D+NDN +P K S +G S+ + D D+ N ++ Y + + E F++ P SG ++ N + F L D G+P L S +E+ I + D S P +A Sbjct: 449 TLQVNVLDCNDHSPTFEAEQFEASIREGATVGS---TVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY---TVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQS----QFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQ---FQESVLENVPVGYNIIRVQAYDSDEGANAEITYSI--SERDDNFPLA--VDPRTGWVQ----------TIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRS--DTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDN---------APAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFA 1114 HSP 2 Score: 210.69 bits (535), Expect = 5.416e-55 Identity = 179/700 (25.57%), Postives = 320/700 (45.71%), Query Frame = 3 Query: 507 RVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQ-TLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEH------FFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPP---RSNSMALTVIINDENDNAP-FIECPENFIIEENR---GELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDH-TFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN---LLT---NLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHE-------SEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY 2522 R + ++ + P F+ + + EEQ ++ +D E ++ ++Y + + D + ++ + + +LDRE D + + A D P SG+ L VN++D ND P F E I E A +G T+ T+ A D DIG N+++++ + E +TD + F I+ +G I + LDRE +S HL V +D S R+ + ++ V + D+NDN P F E + E++ E +TV I+A D D G ++ +I + F + +++ ++S LD E++ +Y LVI D GSP SN+ + + V D NDN P F+ S F+ V+EN ++++++A D+D G NA++ Y I D+ ++ +G + I+P+D E + + KD G P + ++ V +T++D+ND P+ +V E P GT V T++ DPD + +F + N L+T +L++ +E ++ + V D+G T ++ I I+D N+ P + + + S P+G ++ + D D+ NAQ+TY ++E S P F ++P +G + N+ + L + +D G P L ++ I V D + P + Sbjct: 346 RRVRRELRNQSPYFEQALYVASVLEEQPAG----AAVTTVRARDPE-DSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPR-SGTTTLQVNVLDCNDHSPTFEAEQF---EASIREGATVGSTVITLRATDQDIGKNAEIEYGI-EAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMS--------------GDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQE--KRFLLTVAATDSGGRSDTATV--HINITDANNFAPIFEN---------APYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDP-FSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAF 1007 HSP 3 Score: 188.734 bits (478), Expect = 4.768e-48 Identity = 193/751 (25.70%), Postives = 328/751 (43.68%), Query Frame = 3 Query: 384 SKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVT--IRVIVNDINDNPPIFQLPNFTIMIKEEQ-APSDWNYQSIPIAIDQDIELNAKILYRLT--NHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGEL----STVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFI-------ITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPW---ENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI---HESEKPYFILHPDSGNLKLNSTCSV---SDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNP---DYAII-TNFR 2543 S+S + S+ + E + ++ + L Q T ++V V D NDN P F +T+ + E+Q ++ N + A D D NA I Y + N + +F+I + ++ ++ LD E Y ++I A D G P S S + L VN+ID ND+ PRF + E +G I + A+D+D G N+++ +S++E+ D++ + ++ TG + LDRE V+ D G PP+S S ++ + + D NDN P P+ + E N GE + V + A D D S ++ F +++ I +S LD + + L + D+G S++ + I ++D N+ P F + + V E+ ++VL + A+D+D+G+NA + Y + + + D F IN +G + P+D E +T+ KD G+PS + T V + + D+ND P+ S S+ E GT V ++ DPD G G + L + FV + + TN DRE + + I D G P L++++ + I + D+ND+ P T+ P+G + I+ HD D NA + Y I +S + P S +L + + S F LV++ +P L + + I V D + P D+ +I NFR Sbjct: 525 SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMS----GDVSLVKPLDYESVRSYRLVIRAQDGGSP-SRSNTTQLLVNVIDANDNAPRFYTSQFQ---ESVLENVPVGYNIIRVQAYDSDEGANAEITYSISER-DDNFPLA---VDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFN-PKYY--EANVGEDQPPGTPVTTVTATDPDE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQS------------LDYKQEKRFLLTVAATDSGGR--SDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPD-PFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFAS---------DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVRA---ASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFR 1231
BLAST of Protocadherin-11 X-linked vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0339463) HSP 1 Score: 211.46 bits (537), Expect = 3.410e-55 Identity = 196/706 (27.76%), Postives = 319/706 (45.18%), Query Frame = 3 Query: 501 TIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI-AIDQDIELNAKILYRLTNHKDKFTIKYIQIANELK-------IAPLQTLDREKKDKYLIIIEAIDCGKPDS--LSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIG---QTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGF----IKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSG-DLYQI-EPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVAL-------LPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHES--EKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYA 2525 T++V V D ND+ P F+ F I+E I + A DQDI NA+I Y + D + Q + I+ +LDRE D Y +++ A D S + + ++ V ++D ND+ P+FS+ + +V + E G T+A I A D D GNN+ +++++ T S F I+ +G + + LD E S L + D GSP RSN+ L V + D NDNAP + +E+ E VG+ ++A+D D GA++ + + + ++F L+ T +++ T LDRE ++ ++ D G P S S + I V D NDN P F+ +E V E++ + V + A+D D ++ L Y I T N F I +G L I + +D+++ K+ +T+ D G S TA VH+ I D N+ P + + SV E P GT V +S D D G +++ +L L + F + ++TN DRE Y + V +D G P L+++ + I ++D+NDN +P K S +G S+ + D D+ N ++ Y + + E F++ P SG ++ N + F L D G+P L S +E+ I + D S P +A Sbjct: 449 TLQVNVLDCNDHSPTFEAEQFEASIREGATVGS---TVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY---TVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQS----QFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQ---FQESVLENVPVGYNIIRVQAYDSDEGANAEITYSI--SERDDNFPLA--VDPRTGWVQ----------TIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRS--DTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDN---------APAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFA 1114 HSP 2 Score: 210.69 bits (535), Expect = 5.574e-55 Identity = 179/700 (25.57%), Postives = 320/700 (45.71%), Query Frame = 3 Query: 507 RVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQ-TLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEH------FFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPP---RSNSMALTVIINDENDNAP-FIECPENFIIEENR---GELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDH-TFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN---LLT---NLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHE-------SEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY 2522 R + ++ + P F+ + + EEQ ++ +D E ++ ++Y + + D + ++ + + +LDRE D + + A D P SG+ L VN++D ND P F E I E A +G T+ T+ A D DIG N+++++ + E +TD + F I+ +G I + LDRE +S HL V +D S R+ + ++ V + D+NDN P F E + E++ E +TV I+A D D G ++ +I + F + +++ ++S LD E++ +Y LVI D GSP SN+ + + V D NDN P F+ S F+ V+EN ++++++A D+D G NA++ Y I D+ ++ +G + I+P+D E + + KD G P + ++ V +T++D+ND P+ +V E P GT V T++ DPD + +F + N L+T +L++ +E ++ + V D+G T ++ I I+D N+ P + + + S P+G ++ + D D+ NAQ+TY ++E S P F ++P +G + N+ + L + +D G P L ++ I V D + P + Sbjct: 346 RRVRRELRNQSPYFEQALYVASVLEEQPAG----AAVTTVRARDPE-DSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPR-SGTTTLQVNVLDCNDHSPTFEAEQF---EASIREGATVGSTVITLRATDQDIGKNAEIEYGI-EAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMS--------------GDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQE--KRFLLTVAATDSGGRSDTATV--HINITDANNFAPIFEN---------APYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDP-FSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAF 1007 HSP 3 Score: 188.734 bits (478), Expect = 4.778e-48 Identity = 193/751 (25.70%), Postives = 328/751 (43.68%), Query Frame = 3 Query: 384 SKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVT--IRVIVNDINDNPPIFQLPNFTIMIKEEQ-APSDWNYQSIPIAIDQDIELNAKILYRLT--NHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGEL----STVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFI-------ITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPW---ENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI---HESEKPYFILHPDSGNLKLNSTCSV---SDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNP---DYAII-TNFR 2543 S+S + S+ + E + ++ + L Q T ++V V D NDN P F +T+ + E+Q ++ N + A D D NA I Y + N + +F+I + ++ ++ LD E Y ++I A D G P S S + L VN+ID ND+ PRF + E +G I + A+D+D G N+++ +S++E+ D++ + ++ TG + LDRE V+ D G PP+S S ++ + + D NDN P P+ + E N GE + V + A D D S ++ F +++ I +S LD + + L + D+G S++ + I ++D N+ P F + + V E+ ++VL + A+D+D+G+NA + Y + + + D F IN +G + P+D E +T+ KD G+PS + T V + + D+ND P+ S S+ E GT V ++ DPD G G + L + FV + + TN DRE + + I D G P L++++ + I + D+ND+ P T+ P+G + I+ HD D NA + Y I +S + P S +L + + S F LV++ +P L + + I V D + P D+ +I NFR Sbjct: 525 SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMS----GDVSLVKPLDYESVRSYRLVIRAQDGGSP-SRSNTTQLLVNVIDANDNAPRFYTSQFQ---ESVLENVPVGYNIIRVQAYDSDEGANAEITYSISER-DDNFPLA---VDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFN-PKYY--EANVGEDQPPGTPVTTVTATDPDE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQS------------LDYKQEKRFLLTVAATDSGGR--SDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPD-PFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFAS---------DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVRA---ASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFR 1231
BLAST of Protocadherin-11 X-linked vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0330601) HSP 1 Score: 211.075 bits (536), Expect = 3.737e-55 Identity = 196/706 (27.76%), Postives = 319/706 (45.18%), Query Frame = 3 Query: 501 TIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI-AIDQDIELNAKILYRLTNHKDKFTIKYIQIANELK-------IAPLQTLDREKKDKYLIIIEAIDCGKPDS--LSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIG---QTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGF----IKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSG-DLYQI-EPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVAL-------LPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHES--EKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYA 2525 T++V V D ND+ P F+ F I+E I + A DQDI NA+I Y + D + Q + I+ +LDRE D Y +++ A D S + + ++ V ++D ND+ P+FS+ + +V + E G T+A I A D D GNN+ +++++ T S F I+ +G + + LD E S L + D GSP RSN+ L V + D NDNAP + +E+ E VG+ ++A+D D GA++ + + + ++F L+ T +++ T LDRE ++ ++ D G P S S + I V D NDN P F+ +E V E++ + V + A+D D ++ L Y I T N F I +G L I + +D+++ K+ +T+ D G S TA VH+ I D N+ P + + SV E P GT V +S D D G +++ +L L + F + ++TN DRE Y + V +D G P L+++ + I ++D+NDN +P K S +G S+ + D D+ N ++ Y + + E F++ P SG ++ N + F L D G+P L S +E+ I + D S P +A Sbjct: 449 TLQVNVLDCNDHSPTFEAEQFEASIREGATVGS---TVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY---TVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQS----QFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQ---FQESVLENVPVGYNIIRVQAYDSDEGANAEITYSI--SERDDNFPLA--VDPRTGWVQ----------TIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRS--DTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDN---------APAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFA 1114 HSP 2 Score: 210.69 bits (535), Expect = 5.846e-55 Identity = 179/700 (25.57%), Postives = 320/700 (45.71%), Query Frame = 3 Query: 507 RVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQ-TLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEH------FFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPP---RSNSMALTVIINDENDNAP-FIECPENFIIEENR---GELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDH-TFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN---LLT---NLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHE-------SEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY 2522 R + ++ + P F+ + + EEQ ++ +D E ++ ++Y + + D + ++ + + +LDRE D + + A D P SG+ L VN++D ND P F E I E A +G T+ T+ A D DIG N+++++ + E +TD + F I+ +G I + LDRE +S HL V +D S R+ + ++ V + D+NDN P F E + E++ E +TV I+A D D G ++ +I + F + +++ ++S LD E++ +Y LVI D GSP SN+ + + V D NDN P F+ S F+ V+EN ++++++A D+D G NA++ Y I D+ ++ +G + I+P+D E + + KD G P + ++ V +T++D+ND P+ +V E P GT V T++ DPD + +F + N L+T +L++ +E ++ + V D+G T ++ I I+D N+ P + + + S P+G ++ + D D+ NAQ+TY ++E S P F ++P +G + N+ + L + +D G P L ++ I V D + P + Sbjct: 346 RRVRRELRNQSPYFEQALYVASVLEEQPAG----AAVTTVRARDPE-DSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPR-SGTTTLQVNVLDCNDHSPTFEAEQF---EASIREGATVGSTVITLRATDQDIGKNAEIEYGI-EAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMS--------------GDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQE--KRFLLTVAATDSGGRSDTATV--HINITDANNFAPIFEN---------APYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDP-FSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAF 1007 HSP 3 Score: 188.348 bits (477), Expect = 5.007e-48 Identity = 193/751 (25.70%), Postives = 328/751 (43.68%), Query Frame = 3 Query: 384 SKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVT--IRVIVNDINDNPPIFQLPNFTIMIKEEQ-APSDWNYQSIPIAIDQDIELNAKILYRLT--NHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGEL----STVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFI-------ITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPW---ENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI---HESEKPYFILHPDSGNLKLNSTCSV---SDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNP---DYAII-TNFR 2543 S+S + S+ + E + ++ + L Q T ++V V D NDN P F +T+ + E+Q ++ N + A D D NA I Y + N + +F+I + ++ ++ LD E Y ++I A D G P S S + L VN+ID ND+ PRF + E +G I + A+D+D G N+++ +S++E+ D++ + ++ TG + LDRE V+ D G PP+S S ++ + + D NDN P P+ + E N GE + V + A D D S ++ F +++ I +S LD + + L + D+G S++ + I ++D N+ P F + + V E+ ++VL + A+D+D+G+NA + Y + + + D F IN +G + P+D E +T+ KD G+PS + T V + + D+ND P+ S S+ E GT V ++ DPD G G + L + FV + + TN DRE + + I D G P L++++ + I + D+ND+ P T+ P+G + I+ HD D NA + Y I +S + P S +L + + S F LV++ +P L + + I V D + P D+ +I NFR Sbjct: 525 SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMS----GDVSLVKPLDYESVRSYRLVIRAQDGGSP-SRSNTTQLLVNVIDANDNAPRFYTSQFQ---ESVLENVPVGYNIIRVQAYDSDEGANAEITYSISER-DDNFPLA---VDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFN-PKYY--EANVGEDQPPGTPVTTVTATDPDE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQS------------LDYKQEKRFLLTVAATDSGGR--SDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPD-PFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFAS---------DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVRA---ASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFR 1231
BLAST of Protocadherin-11 X-linked vs. Ensembl Zebrafish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 289.271 bits (739), Expect = 3.682e-82 Identity = 230/806 (28.54%), Postives = 382/806 (47.39%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKL--CRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEF--QEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANEL-----KIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGEL---------STVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFII--TNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRN--LNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPY--FILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHV 2492 Y ++EEQ P +G++ D L L +LE P+ + K I+ + +DRE L CR N K CF+ +S+ + + ++ R+ V DINDN P F P T+ + E SIP+A D+D E N Y LT + + +Q+A + ++ L +LDRE KD Y + I+A+D G P S +L L V I D ND+ P+F K S ++E + IG ++ + A+D+D+G N +++++L++ + + I++S+G I+V LDRE ++ +V+ D G P+S+ +++ + D+NDNAP +E ++ + G + V ++ D D G ++ +C + P F+L + S +K + L TT+ LD E + Y + I+ D+G+P LS++ + + V+D NDN P F + FE++ E V+++ ASD D G NA+L+Y II ++ F I+ SG++ P+D E + + D+G PS TA V + + D ND P + + SV E+MP + V ++V D D G +V +++ P KFV +N +L+++ FDRE Y+ + D G P ++ + +TI + D NDN P +T S +++S S E + D D NA+L Y I P+ F + P +G + L + G RLVIKV D G P ++ + I+V Sbjct: 27 YRVHEEQPPSTLIGSLAADQGLPDTGHLYKLEVGA----PYLRVDGKTGDIF---------TTEIPIDRETLKDCR--------------------NKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVPENTHMGALF--SIPLATDKDTERNGVADYTLTAGPEAVALFGLQVAEDRGEKLPQLIVLGSLDRELKDSYDLTIKAVDGGNPPRYSSAL-LRVVIADANDNAPKFEKSSYE---AEVAENSPIGHSVLQVKANDSDLGPNGEIEYTLHQAIDPVPKL--LRIDRSSGIIYVKGPLDREEINNLKFYVVARDKGPSPKSSKTYVSIDVTDQNDNAPAVEIRGIGLVTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVP---FQLRPASDSSVDNKRK-----YFLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSPIFSPTLFEVEFAEENQPGEKVVEVVASDADSGTNAELVYSIIADSSTRGLFEIDPNSGEVRARSPLDREHKDRYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQDMDEGENAQVQLSVEPDVGKFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVVTKPSNSSFIRLSPMAAPDSVVE-------VVEAEDIDSGSNAELVYSI-AGGNPHDLFYISPSNGEITLTKELTRKHSGLHRLVIKVSDRGKPSRHAIALVHIYV 775 HSP 2 Score: 144.821 bits (364), Expect = 1.025e-34 Identity = 115/408 (28.19%), Postives = 188/408 (46.08%), Query Frame = 3 Query: 1440 LDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFI---ITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPS-------LVSYSMN-PSVAEHMPKGTVVQTLSVIDPDTGP--------GGEVSVALLPWENKFV--FRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI--HESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAIITNFRIVLIVIPTLIGISFSVI 2594 LDRE +Y L I D G+P +S L+ ++++D NDN P F +S++E +V EN SVL++KA+D+D+G N ++ Y + I V I+++SG +Y P+D E + + +D+G ++ YV + + D ND P+ LV++S +++E MP GT V + V D D G G+V L P + V R L T D E Y + ++ D+G P L+++ L + ++D NDN P I SP + + F+ + G + + D D NA+L Y I S + F + P+SG ++ S + + D G P ++I V+D ++P + L G SFSV+ Sbjct: 201 LDRELKDSYDLTIKAVDGGNPPRYSSALLRVVIADANDNAPKFEKSSYEAEVAENSPIGHSVLQVKANDSDLGPNGEIEYTLHQAIDPVPKLLRIDRSSGIIYVKGPLDREEINNLKFYVVARDKGPSPKSSKTYVSIDVTDQNDNAPAVEIRGIGLVTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSVDNKRKYFLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSP-----IFSPTLF----EVEFAEENQPGEKVVEVVASDADSGTNAELVYSIIADSSTRGLFEIDPNSGEVRARSPLDREHKDRYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKF--------------MLSGYSFSVL 585 HSP 3 Score: 130.183 bits (326), Expect = 3.438e-30 Identity = 113/382 (29.58%), Postives = 182/382 (47.64%), Query Frame = 3 Query: 738 LQT---LDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKP-TNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHR---SNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHT-FMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKD 1856 LQT LD E+ Y + I A+D G P +LS + +L V + D ND+ P FS L V +E+ + G+ + + A D D G N++L +S+ + DS F I+ ++G + + LDRE + V +D G P + + + + D NDN P F+ +F + EN LS VG + DMD G ++ ++++P F + N T I SI F DRE S+Y+ + D G P S+ ++I V D+NDN P + S+F I++ S V ++A D D G NA+L+Y I H F I+ ++G++ + + + + I D+G PS A VH+ + + Sbjct: 421 LQTTTPLDYERVRDYRVEIVAVDSGNP-ALSSTNSLKVQVTDTNDNSPIFSP---TLFEVEFAEENQPGEKVVEVVASDADSGTNAELVYSI---IADSSTRGLFEIDPNSGEVRARSPLDREHKDRYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQDMDEGENAQVQ---LSVEPDVGKFVIQN----GTGTILSSISF----------DREKESSYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVVTKPSNSSF-IRLSPMAAPDSVVEVVEAEDIDSGSNAELVYSIAGGNPHDLFYISPSNGEITLTKELTRKHSGLHRLVIKVSDRGKPSRHAIALVHIYVNE 777 HSP 4 Score: 117.472 bits (293), Expect = 3.254e-26 Identity = 103/357 (28.85%), Postives = 160/357 (44.82%), Query Frame = 3 Query: 501 TIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQI-ANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPEN--FI-IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNI 1559 +++V V D NDN PIF F + EE P + + + A D D NA+++Y + D T +I N ++ LDRE KD+Y + A D G P S G+ + + ++D ND+ P+F L+ S + E + + D D G N+++Q S+ + F I TG I DRE S + D G PPRS+ + +T+ + DENDNAP + P N FI + S V ++A D+DSG+++ + P + F YI S E++ T L R++ + LVI D G P L+ I V++ N+ Sbjct: 454 SLKVQVTDTNDNSPIFSPTLFEVEFAEENQPGEKVVEVV--ASDADSGTNAELVYSII--ADSSTRGLFEIDPNSGEVRARSPLDREHKDRYEFRVTAADKGVP-SHRGTATVVIKVLDRNDNDPKFM---LSGYSFSVLENMPPLSPVGMVTVQDMDEGENAQVQLSVEPDVG------KFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVVTKPSNSSFIRLSPMAAPDSVVEVVEAEDIDSGSNAELVYSIAGGNPHDLF-----------YISPS---NGEITLTKELTRKHSGLHRLVIKVSDRGKPSRHAIALVHIYVNETIANV 782 HSP 5 Score: 73.9442 bits (180), Expect = 9.011e-13 Identity = 70/252 (27.78%), Postives = 114/252 (45.24%), Query Frame = 3 Query: 480 QEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAI----DQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVI-VSDCGSPPRSNSMALTVIINDENDNAPFIEC 1220 G V I+V+ D NDN P F L ++ + E P P+ + D D NA++ + KF I+ I + DREK+ Y ++A+D G P S + +T+N++D ND+ P +K S N + +S A + + A D D G+N++L +S+ + F+I+ S G I + EL R+ + +H VI VSD G P R + + +N+ N +E Sbjct: 555 HRGTATVVIKVL--DRNDNDPKFMLSGYSFSVLENMPPLS------PVGMVTVQDMDEGENAQVQLSVEPDVGKFVIQ----NGTGTILSSISFDREKESSYTFRLKAVDGGDP-PRSSYVGVTINVLDENDNAPVVTKPS-NSSFIRLSPMAAPDSVVEVVEAEDIDSGSNAELVYSI----AGGNPHDLFYISPSNGEITLTKELTRK-HSGLHRLVIKVSDRGKPSRHAIALVHIYVNETIANVSHVEA 787
BLAST of Protocadherin-11 X-linked vs. Ensembl Zebrafish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 289.271 bits (739), Expect = 2.377e-81 Identity = 230/806 (28.54%), Postives = 382/806 (47.39%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKL--CRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEF--QEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANEL-----KIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGEL---------STVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFII--TNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRN--LNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPY--FILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHV 2492 Y ++EEQ P +G++ D L L +LE P+ + K I+ + +DRE L CR N K CF+ +S+ + + ++ R+ V DINDN P F P T+ + E SIP+A D+D E N Y LT + + +Q+A + ++ L +LDRE KD Y + I+A+D G P S +L L V I D ND+ P+F K S ++E + IG ++ + A+D+D+G N +++++L++ + + I++S+G I+V LDRE ++ +V+ D G P+S+ +++ + D+NDNAP +E ++ + G + V ++ D D G ++ +C + P F+L + S +K + L TT+ LD E + Y + I+ D+G+P LS++ + + V+D NDN P F + FE++ E V+++ ASD D G NA+L+Y II ++ F I+ SG++ P+D E + + D+G PS TA V + + D ND P + + SV E+MP + V ++V D D G +V +++ P KFV +N +L+++ FDRE Y+ + D G P ++ + +TI + D NDN P +T S +++S S E + D D NA+L Y I P+ F + P +G + L + G RLVIKV D G P ++ + I+V Sbjct: 27 YRVHEEQPPSTLIGSLAADQGLPDTGHLYKLEVGA----PYLRVDGKTGDIF---------TTEIPIDRETLKDCR--------------------NKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVPENT--HMGALFSIPLATDKDTERNGVADYTLTAGPEAVALFGLQVAEDRGEKLPQLIVLGSLDRELKDSYDLTIKAVDGGNPPRYSSAL-LRVVIADANDNAPKFEKSSYE---AEVAENSPIGHSVLQVKANDSDLGPNGEIEYTLHQAIDPVPKL--LRIDRSSGIIYVKGPLDREEINNLKFYVVARDKGPSPKSSKTYVSIDVTDQNDNAPAVEIRGIGLVTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVP---FQLRPASDSSVDNKRK-----YFLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSPIFSPTLFEVEFAEENQPGEKVVEVVASDADSGTNAELVYSIIADSSTRGLFEIDPNSGEVRARSPLDREHKDRYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQDMDEGENAQVQLSVEPDVGKFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVVTKPSNSSFIRLSPMAAPDSVVE-------VVEAEDIDSGSNAELVYSI-AGGNPHDLFYISPSNGEITLTKELTRKHSGLHRLVIKVSDRGKPSRHAIALVHIYV 775 HSP 2 Score: 143.665 bits (361), Expect = 2.731e-34 Identity = 115/408 (28.19%), Postives = 188/408 (46.08%), Query Frame = 3 Query: 1440 LDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFI---ITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPS-------LVSYSMN-PSVAEHMPKGTVVQTLSVIDPDTGP--------GGEVSVALLPWENKFV--FRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI--HESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAIITNFRIVLIVIPTLIGISFSVI 2594 LDRE +Y L I D G+P +S L+ ++++D NDN P F +S++E +V EN SVL++KA+D+D+G N ++ Y + I V I+++SG +Y P+D E + + +D+G ++ YV + + D ND P+ LV++S +++E MP GT V + V D D G G+V L P + V R L T D E Y + ++ D+G P L+++ L + ++D NDN P I SP + + F+ + G + + D D NA+L Y I S + F + P+SG ++ S + + D G P ++I V+D ++P + L G SFSV+ Sbjct: 201 LDRELKDSYDLTIKAVDGGNPPRYSSALLRVVIADANDNAPKFEKSSYEAEVAENSPIGHSVLQVKANDSDLGPNGEIEYTLHQAIDPVPKLLRIDRSSGIIYVKGPLDREEINNLKFYVVARDKGPSPKSSKTYVSIDVTDQNDNAPAVEIRGIGLVTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSVDNKRKYFLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSP-----IFSPTLF----EVEFAEENQPGEKVVEVVASDADSGTNAELVYSIIADSSTRGLFEIDPNSGEVRARSPLDREHKDRYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKF--------------MLSGYSFSVL 585 HSP 3 Score: 130.568 bits (327), Expect = 3.657e-30 Identity = 113/382 (29.58%), Postives = 182/382 (47.64%), Query Frame = 3 Query: 738 LQT---LDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKP-TNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHR---SNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHT-FMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKD 1856 LQT LD E+ Y + I A+D G P +LS + +L V + D ND+ P FS L V +E+ + G+ + + A D D G N++L +S+ + DS F I+ ++G + + LDRE + V +D G P + + + + D NDN P F+ +F + EN LS VG + DMD G ++ ++++P F + N T I SI F DRE S+Y+ + D G P S+ ++I V D+NDN P + S+F I++ S V ++A D D G NA+L+Y I H F I+ ++G++ + + + + I D+G PS A VH+ + + Sbjct: 421 LQTTTPLDYERVRDYRVEIVAVDSGNP-ALSSTNSLKVQVTDTNDNSPIFSP---TLFEVEFAEENQPGEKVVEVVASDADSGTNAELVYSI---IADSSTRGLFEIDPNSGEVRARSPLDREHKDRYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQDMDEGENAQVQ---LSVEPDVGKFVIQN----GTGTILSSISF----------DREKESSYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVVTKPSNSSF-IRLSPMAAPDSVVEVVEAEDIDSGSNAELVYSIAGGNPHDLFYISPSNGEITLTKELTRKHSGLHRLVIKVSDRGKPSRHAIALVHIYVNE 777 HSP 4 Score: 117.472 bits (293), Expect = 3.882e-26 Identity = 103/357 (28.85%), Postives = 160/357 (44.82%), Query Frame = 3 Query: 501 TIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQI-ANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPEN--FI-IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNI 1559 +++V V D NDN PIF F + EE P + + + A D D NA+++Y + D T +I N ++ LDRE KD+Y + A D G P S G+ + + ++D ND+ P+F L+ S + E + + D D G N+++Q S+ + F I TG I DRE S + D G PPRS+ + +T+ + DENDNAP + P N FI + S V ++A D+DSG+++ + P + F YI S E++ T L R++ + LVI D G P L+ I V++ N+ Sbjct: 454 SLKVQVTDTNDNSPIFSPTLFEVEFAEENQPGEKVVEVV--ASDADSGTNAELVYSII--ADSSTRGLFEIDPNSGEVRARSPLDREHKDRYEFRVTAADKGVP-SHRGTATVVIKVLDRNDNDPKFM---LSGYSFSVLENMPPLSPVGMVTVQDMDEGENAQVQLSVEPDVG------KFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVVTKPSNSSFIRLSPMAAPDSVVEVVEAEDIDSGSNAELVYSIAGGNPHDLF-----------YISPS---NGEITLTKELTRKHSGLHRLVIKVSDRGKPSRHAIALVHIYVNETIANV 782 HSP 5 Score: 73.559 bits (179), Expect = 1.245e-12 Identity = 70/252 (27.78%), Postives = 114/252 (45.24%), Query Frame = 3 Query: 480 QEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAI----DQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVI-VSDCGSPPRSNSMALTVIINDENDNAPFIEC 1220 G V I+V+ D NDN P F L ++ + E P P+ + D D NA++ + KF I+ I + DREK+ Y ++A+D G P S + +T+N++D ND+ P +K S N + +S A + + A D D G+N++L +S+ + F+I+ S G I + EL R+ + +H VI VSD G P R + + +N+ N +E Sbjct: 555 HRGTATVVIKVL--DRNDNDPKFMLSGYSFSVLENMPPLS------PVGMVTVQDMDEGENAQVQLSVEPDVGKFVIQ----NGTGTILSSISFDREKESSYTFRLKAVDGGDP-PRSSYVGVTINVLDENDNAPVVTKPS-NSSFIRLSPMAAPDSVVEVVEAEDIDSGSNAELVYSI----AGGNPHDLFYISPSNGEITLTKELTRK-HSGLHRLVIKVSDRGKPSRHAIALVHIYVNETIANVSHVEA 787
BLAST of Protocadherin-11 X-linked vs. Ensembl Zebrafish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 277.33 bits (708), Expect = 5.021e-78 Identity = 225/796 (28.27%), Postives = 379/796 (47.61%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIIN--DENDNAPFIECP-------ENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISF--SYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELI 2483 Y++ EEQ + +GN+ DL L+ +K + L F P + + ++ +++ + L ++DREKLC S +F + K C+ I +++L E +V IR ++ DINDN P+FQ I I E A + + +P A D DI +N Y L +F + I+ K L Q+LDRE KD +++ I+ D G P S ++ L V + D+ND++P F + V + E A +G ++ + A D D+G+N+++ FS + +++ S HF I+ +TG I V LDRE+ L V+ SD S P TVI+N D NDN P I+ ++ EN + + I D DS + +C + P F+L V + F L T + LD E Y++ I+ D+G P L+ S ++ I + D+NDN+P F + ++ + EN + ++K+ A+D D G NA ++Y + + F I+ SG L ++ +D E+ ++ + T+ +D G+ + V + ++D ND P+ N V E++P V ++V D D G V+++++ ++ F+ + + N+ FDRE Y+ +V D G + T+ +TI + D+NDNRP + SN + S P G + ++ D+D NA+L Y I S + F + +GN+ L +D G RLV+KV+D G P + L+ Sbjct: 28 YTVKEEQPENVRIGNLRKDLNLNLDPDIKL--SSALQFKPVYK-TGDVPLVKVEASTGEILTTANRIDREKLC--------SGVF----------NEKRCYYEIEVAVLP-DEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAIN--SRYPVPSAFDPDIGINGIQHYELVKSVSEFGLDIIETPEGDKWPQLIVQQSLDRETKDTFVMKIKVEDGGNPPKSSTAI-LQVTVSDVNDNRPVFKDSE---VEVNVPENAPMGTSVTHLHATDADLGSNAQIHFSFSNQISPS-TKRHFAIDSTTGLITVKQPLDREVNPVHKLIVLASDGSSTPSR----ATVIVNVTDINDNVPSIDTRYIMNLVNGTVLLSENAPLNTKIALITVTDRDSDLNGKVTCYTDHDVP---FRLKPVFNDQ-----------FLLETAAPLDYETTREYAIRIVASDSGKPPLNTSAMVLIKIKDENDNVPVFPQPEIQLSIPENNDPGTQLIKISATDADSGSNALIIYSLGPDAPDGFNIDSRSGILSVVKRLDREKQEKYSFTVIARDNGTTPLQSNVTVKLIVQDQNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAVVTLSIINGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDAGLMQTTSYAKVTINVVDVNDNRPVFV-------IPSSNYSYDLVPSNTSP-GSVVTRVFAIDNDTGMNAELQYSIIGGSLRGLFTIDKTTGNITLQEKIVAADQGLHRLVVKVKDLGQPESLHAIALV 768 HSP 2 Score: 152.525 bits (384), Expect = 3.698e-37 Identity = 172/662 (25.98%), Postives = 293/662 (44.26%), Query Frame = 3 Query: 627 IDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREK--------KDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTG----AIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFI-IEENRGELSTVGFIKAFDMDSGASSNCSCDLIN-IKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIP------FFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIE---PIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLP-WENKFVFRNLNLLTNL--EFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQE--PIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAI 2528 +D DI+L++ + ++ + ++ + + +DREK K Y I A+ PD + + + I DIND+ P F +I++ I E I A D DIG N + L + +++ + ++ I G + V LDRE ++ + + V D G+PP+S++ L V ++D NDN P + E + + EN ++V + A D D G+++ N I P+ + ++STT + ++ LDRE + L++L D GS S + +I + V+D NDN+P + N + + EN + + + +D D +N + + T+ D F + D + +E P+D+E ++ I I D G P T+A V + IKD ND P + S+ E+ GT + +S D D+G + +L P + F + + + ++ DRE +KYS VI RDNG L +++ + + + D NDN P TH +F E P+ ++ I D D NA +T I K FI+ P +G +K N T S+ V+K D G + S ++ I+VVD + P + I Sbjct: 51 LDPDIKLSSALQFKPVYKTGDVPLVKVEASTGEILTTANRIDREKLCSGVFNEKRCYYEIEVAV---LPDEIFRLVKIRFLIEDINDNAPLFQS---TVINISIPENTAINSRYPVPSAFDPDIGINGIQHYELVKSVSE-FGLD--IIETPEGDKWPQLIVQQSLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVNVPENAPMGTSVTHLHATDADLGSNAQIHFSFSNQISPSTKRHFA---IDSTTGL---------ITVKQPLDREVNPVHKLIVLASD-GSSTPSRATVI-VNVTDINDNVPSIDTRYIMNLVNGTVLLSENAPLNTKIALITVTDRDSDLNGKVTCY--TDHDVPFRLKPVFNDQFLLETAAPLDYETTREYAIRIVASDSGKPPLNTSAMVLIKIKDENDNVPVFPQPEIQLSIPENNDPGTQLIKISATDADSGSNALIIYSLGPDAPDGFNIDSRSGILSVVKRLDREKQEKYSFTVIARDNGTTPLQSNVTVKLIVQDQNDNSPAFTH-----------PEYNFYVPENLPLYGTVGLITVTDADAGDNAVVTLSIING-KDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDAGLMQTTSYAKVTINVVDVNDNRPVFVI 675
BLAST of Protocadherin-11 X-linked vs. Ensembl Zebrafish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 276.174 bits (705), Expect = 3.106e-77 Identity = 225/796 (28.27%), Postives = 379/796 (47.61%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIIN--DENDNAPFIECP-------ENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISF--SYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELI 2483 Y++ EEQ + +GN+ DL L+ +K + L F P + + ++ +++ + L ++DREKLC S +F + K C+ I +++L E +V IR ++ DINDN P+FQ I I E A + + +P A D DI +N Y L +F + I+ K L Q+LDRE KD +++ I+ D G P S ++ L V + D+ND++P F + V + E A +G ++ + A D D+G+N+++ FS + +++ S HF I+ +TG I V LDRE+ L V+ SD S P TVI+N D NDN P I+ ++ EN + + I D DS + +C + P F+L V + F L T + LD E Y++ I+ D+G P L+ S ++ I + D+NDN+P F + ++ + EN + ++K+ A+D D G NA ++Y + + F I+ SG L ++ +D E+ ++ + T+ +D G+ + V + ++D ND P+ N V E++P V ++V D D G V+++++ ++ F+ + + N+ FDRE Y+ +V D G + T+ +TI + D+NDNRP + SN + S P G + ++ D+D NA+L Y I S + F + +GN+ L +D G RLV+KV+D G P + L+ Sbjct: 28 YTVKEEQPENVRIGNLRKDLNLNLDPDIKL--SSALQFKPVYK-TGDVPLVKVEASTGEILTTANRIDREKLC--------SGVF----------NEKRCYYEIEVAVLP-DEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAIN--SRYPVPSAFDPDIGINGIQHYELVKSVSEFGLDIIETPEGDKWPQLIVQQSLDRETKDTFVMKIKVEDGGNPPKSSTAI-LQVTVSDVNDNRPVFKDSE---VEVNVPENAPMGTSVTHLHATDADLGSNAQIHFSFSNQISPS-TKRHFAIDSTTGLITVKQPLDREVNPVHKLIVLASDGSSTPSR----ATVIVNVTDINDNVPSIDTRYIMNLVNGTVLLSENAPLNTKIALITVTDRDSDLNGKVTCYTDHDVP---FRLKPVFNDQ-----------FLLETAAPLDYETTREYAIRIVASDSGKPPLNTSAMVLIKIKDENDNVPVFPQPEIQLSIPENNDPGTQLIKISATDADSGSNALIIYSLGPDAPDGFNIDSRSGILSVVKRLDREKQEKYSFTVIARDNGTTPLQSNVTVKLIVQDQNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAVVTLSIINGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDAGLMQTTSYAKVTINVVDVNDNRPVFV-------IPSSNYSYDLVPSNTSP-GSVVTRVFAIDNDTGMNAELQYSIIGGSLRGLFTIDKTTGNITLQEKIVAADQGLHRLVVKVKDLGQPESLHAIALV 768 HSP 2 Score: 151.754 bits (382), Expect = 8.696e-37 Identity = 172/662 (25.98%), Postives = 293/662 (44.26%), Query Frame = 3 Query: 627 IDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREK--------KDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTG----AIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFI-IEENRGELSTVGFIKAFDMDSGASSNCSCDLIN-IKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIP------FFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIE---PIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLP-WENKFVFRNLNLLTNL--EFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQE--PIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAI 2528 +D DI+L++ + ++ + ++ + + +DREK K Y I A+ PD + + + I DIND+ P F +I++ I E I A D DIG N + L + +++ + ++ I G + V LDRE ++ + + V D G+PP+S++ L V ++D NDN P + E + + EN ++V + A D D G+++ N I P+ + ++STT + ++ LDRE + L++L D GS S + +I + V+D NDN+P + N + + EN + + + +D D +N + + T+ D F + D + +E P+D+E ++ I I D G P T+A V + IKD ND P + S+ E+ GT + +S D D+G + +L P + F + + + ++ DRE +KYS VI RDNG L +++ + + + D NDN P TH +F E P+ ++ I D D NA +T I K FI+ P +G +K N T S+ V+K D G + S ++ I+VVD + P + I Sbjct: 51 LDPDIKLSSALQFKPVYKTGDVPLVKVEASTGEILTTANRIDREKLCSGVFNEKRCYYEIEVAV---LPDEIFRLVKIRFLIEDINDNAPLFQS---TVINISIPENTAINSRYPVPSAFDPDIGINGIQHYELVKSVSE-FGLD--IIETPEGDKWPQLIVQQSLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVNVPENAPMGTSVTHLHATDADLGSNAQIHFSFSNQISPSTKRHFA---IDSTTGL---------ITVKQPLDREVNPVHKLIVLASD-GSSTPSRATVI-VNVTDINDNVPSIDTRYIMNLVNGTVLLSENAPLNTKIALITVTDRDSDLNGKVTCY--TDHDVPFRLKPVFNDQFLLETAAPLDYETTREYAIRIVASDSGKPPLNTSAMVLIKIKDENDNVPVFPQPEIQLSIPENNDPGTQLIKISATDADSGSNALIIYSLGPDAPDGFNIDSRSGILSVVKRLDREKQEKYSFTVIARDNGTTPLQSNVTVKLIVQDQNDNSPAFTH-----------PEYNFYVPENLPLYGTVGLITVTDADAGDNAVVTLSIING-KDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDAGLMQTTSYAKVTINVVDVNDNRPVFVI 675
BLAST of Protocadherin-11 X-linked vs. Ensembl Zebrafish
Match: CR847522.1 (pep chromosome:GRCz11:CHR_ALT_CTG6_1_1:4874141:4879379:1 gene:ENSDARG00000111493.1 transcript:ENSDART00000185190.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CR847522.1) HSP 1 Score: 261.151 bits (666), Expect = 4.342e-72 Identity = 230/845 (27.22%), Postives = 382/845 (45.21%), Query Frame = 3 Query: 30 VNFRYFFFLYMLVILHFWCIISIKPFATNLLDQIGINFTYSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFE--------LSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESE-KPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY 2522 ++ R FF L LV FW L I Y + EE + +GNI DL + + S N + + + ++ + ++DREKLC F ++ C I + +L + ++ I++IV D NDN P+F P I I E + + +IP A D D N+ Y L N + F + ++ K L Q LDRE+KD Y++ ++ D G P S ++ L V + D+ND++P F KES I V I E + +G ++ + A D D+G N+++++ +++ + F +N +TG I V LDRE L V+ SD S P +T+ + D NDNAP I+ +II G + + N LI + S K ++V + +I+K + F + L T+++LD E Y I+ D+G P L+ + L+ + + D+NDN P F + E+ V+EN + + + A+D D G NA+++Y + N F +++ +G L D E ++ T+ +D G+ + + A V VTI D ND P V+E++PK + V ++V D D G V +++L F+ + + +N+ FDRE Y+ V DNG P +++ +TI + D+NDN P ++ P S + + S G +A ++ D D NA+L Y I + F + P +GN+ L +++D+G RLV+ + D G P+ L L+ V+ N Y Sbjct: 1 MDLRDFFLLATLVAC-FW-----------LDPTIAQELIYPIREELQENVLIGNIPKDLNISHMNSATGATSNLVYRLVSKAGDTPLLRVMSNTG--EIFTTSNRIDREKLC-------PGPSF----------EDSECSFEIEVVILP-NDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLIN--SRFAIPSATDPDTGPNSVHKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAI-LQVTVTDVNDNRPVF-KESQ--IEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPA-TRRLFALNTTTGLITVQRPLDREETAIHKLTVLASDGSSSPAR--ATITINVTDVNDNAPNIDL--RYIISPTNGTVM---------LSEKDPINTKIALITV----SDKDTDVNGKVICFIEKDVPFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPNASF-FDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVRLSILNDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDVNDNTP----IVIYPPSNTSFKLVPLSAIP--GSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGLHRLVVNISDLGYPKSLHTLVLVFLFVNDTVGNSSY 782
BLAST of Protocadherin-11 X-linked vs. Ensembl Xenopus
Match: ENSXETT00000047798.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938]) HSP 1 Score: 291.197 bits (744), Expect = 1.485e-82 Identity = 257/905 (28.40%), Postives = 416/905 (45.97%), Query Frame = 3 Query: 57 YMLVILHFWCIISIKPFATNLLDQIGINFTYSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYK---------DSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIEC-----PENFIIE-ENRGELST-VGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGS-FRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY-----------AIITNFR----------IVLIVIPTLIGISFSVILLFVIKTVQKQKANR 2639 Y+L +L CI+ F + ++ Y + EE + +GN++ DL L T P +F ++YK + + ++DREKLC S IF+ +NK CF + +++L E +V IR ++ DINDN P+F I I E A + + S+P AID D+ +N Y L ++ F + I+ K L Q+LDRE+KD Y++ I+ D G P S ++ L V + D+ND++P F ++ I V I E A +G ++ + A D D+G+N+K+ F ++T+ A HF I+ +TG I V LDRE L V+ SD S P + +T+ I D NDN P I+ P N ++ + L+T + I D D+ + +C F +V +K F L T + LD E+ Y++ I+ D+G P L+ S ++ I + D+NDN P F + VEN + + K+ A+D D G NA+L Y + N F +++ +G L + +D E+ + T T+ KD G+PS T V +++ D ND PS N V E++P V ++V D D+G V+++L+ + F+ L + N+ FDRE Y+ V D G P+ ++++ +TI + D+NDN+P + P S + S G +A +Y D+D NA L Y I + + F + SGN+ L D G ++LVIKV D+G P F + + V+ +N Y A+ +FR V I+I + G ++++FV V+ ++ R Sbjct: 8 YLLAVL-IACIV----FESGAQEK-----NYIVREELPENVLIGNLLKDLNL--------------TLDPDLSTPLQFKLVYKTGDVPLIRVEENTGEIFTTSNRIDREKLC--------SGIFT---------ENK-CFYEVEVAVLP-DEVFRLVKIRFLIEDINDNSPLFPSTVINISIPENTAVN--SRYSVPSAIDPDVGVNGIQHYELLKGQNVFGLDVIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAI-LQVTVTDVNDNRPVFKEKD---IEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITN-LAKRHFAIDNNTGLITVKEPLDREESPYHKLTVLASDGSSTP--SRATVTINITDINDNIPSIDTRYIINPVNGTVQLSEKAPLNTKIALITVTDKDADLNGKVTC----------FTDHDVPFR----LKPVFDNQFLLETAAPLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISATDADSGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAVVTLSLVNARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKP----VFVIPSNNYSYDLVQTSTSP--GSVVARVYAIDNDTGINADLRYSIIGGNSRGLFAIGERSGNITLKEKLLAGDHGVLYKLVIKVNDSGKPEPFHTIAFVHLFVNETITNGSYIQELVRKSKETAVGEDFRDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPR 840
BLAST of Protocadherin-11 X-linked vs. Ensembl Xenopus
Match: ENSXETT00000047804.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938]) HSP 1 Score: 290.426 bits (742), Expect = 2.496e-82 Identity = 257/905 (28.40%), Postives = 416/905 (45.97%), Query Frame = 3 Query: 57 YMLVILHFWCIISIKPFATNLLDQIGINFTYSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYK---------DSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIEC-----PENFIIE-ENRGELST-VGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGS-FRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY-----------AIITNFR----------IVLIVIPTLIGISFSVILLFVIKTVQKQKANR 2639 Y+L +L CI+ F + ++ Y + EE + +GN++ DL L T P +F ++YK + + ++DREKLC S IF+ +NK CF + +++L E +V IR ++ DINDN P+F I I E A + + S+P AID D+ +N Y L ++ F + I+ K L Q+LDRE+KD Y++ I+ D G P S ++ L V + D+ND++P F ++ I V I E A +G ++ + A D D+G+N+K+ F ++T+ A HF I+ +TG I V LDRE L V+ SD S P + +T+ I D NDN P I+ P N ++ + L+T + I D D+ + +C F +V +K F L T + LD E+ Y++ I+ D+G P L+ S ++ I + D+NDN P F + VEN + + K+ A+D D G NA+L Y + N F +++ +G L + +D E+ + T T+ KD G+PS T V +++ D ND PS N V E++P V ++V D D+G V+++L+ + F+ L + N+ FDRE Y+ V D G P+ ++++ +TI + D+NDN+P + P S + S G +A +Y D+D NA L Y I + + F + SGN+ L D G ++LVIKV D+G P F + + V+ +N Y A+ +FR V I+I + G ++++FV V+ ++ R Sbjct: 28 YLLAVL-IACIV----FESGAQEK-----NYIVREELPENVLIGNLLKDLNL--------------TLDPDLSTPLQFKLVYKTGDVPLIRVEENTGEIFTTSNRIDREKLC--------SGIFT---------ENK-CFYEVEVAVLP-DEVFRLVKIRFLIEDINDNSPLFPSTVINISIPENTAVN--SRYSVPSAIDPDVGVNGIQHYELLKGQNVFGLDVIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAI-LQVTVTDVNDNRPVFKEKD---IEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITN-LAKRHFAIDNNTGLITVKEPLDREESPYHKLTVLASDGSSTP--SRATVTINITDINDNIPSIDTRYIINPVNGTVQLSEKAPLNTKIALITVTDKDADLNGKVTC----------FTDHDVPFR----LKPVFDNQFLLETAAPLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISATDADSGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAVVTLSLVNARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKP----VFVIPSNNYSYDLVQTSTSP--GSVVARVYAIDNDTGINADLRYSIIGGNSRGLFAIGERSGNITLKEKLLAGDHGVLYKLVIKVNDSGKPEPFHTIAFVHLFVNETITNGSYIQELVRKSKETAVGEDFRDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPR 860
BLAST of Protocadherin-11 X-linked vs. Ensembl Xenopus
Match: ENSXETT00000047801.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938]) HSP 1 Score: 290.041 bits (741), Expect = 4.492e-82 Identity = 257/905 (28.40%), Postives = 416/905 (45.97%), Query Frame = 3 Query: 57 YMLVILHFWCIISIKPFATNLLDQIGINFTYSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYK---------DSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIEC-----PENFIIE-ENRGELST-VGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGS-FRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY-----------AIITNFR----------IVLIVIPTLIGISFSVILLFVIKTVQKQKANR 2639 Y+L +L CI+ F + ++ Y + EE + +GN++ DL L T P +F ++YK + + ++DREKLC S IF+ +NK CF + +++L E +V IR ++ DINDN P+F I I E A + + S+P AID D+ +N Y L ++ F + I+ K L Q+LDRE+KD Y++ I+ D G P S ++ L V + D+ND++P F ++ I V I E A +G ++ + A D D+G+N+K+ F ++T+ A HF I+ +TG I V LDRE L V+ SD S P + +T+ I D NDN P I+ P N ++ + L+T + I D D+ + +C F +V +K F L T + LD E+ Y++ I+ D+G P L+ S ++ I + D+NDN P F + VEN + + K+ A+D D G NA+L Y + N F +++ +G L + +D E+ + T T+ KD G+PS T V +++ D ND PS N V E++P V ++V D D+G V+++L+ + F+ L + N+ FDRE Y+ V D G P+ ++++ +TI + D+NDN+P + P S + S G +A +Y D+D NA L Y I + + F + SGN+ L D G ++LVIKV D+G P F + + V+ +N Y A+ +FR V I+I + G ++++FV V+ ++ R Sbjct: 28 YLLAVL-IACIV----FESGAQEK-----NYIVREELPENVLIGNLLKDLNL--------------TLDPDLSTPLQFKLVYKTGDVPLIRVEENTGEIFTTSNRIDREKLC--------SGIFT---------ENK-CFYEVEVAVLP-DEVFRLVKIRFLIEDINDNSPLFPSTVINISIPENTAVN--SRYSVPSAIDPDVGVNGIQHYELLKGQNVFGLDVIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAI-LQVTVTDVNDNRPVFKEKD---IEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITN-LAKRHFAIDNNTGLITVKEPLDREESPYHKLTVLASDGSSTP--SRATVTINITDINDNIPSIDTRYIINPVNGTVQLSEKAPLNTKIALITVTDKDADLNGKVTC----------FTDHDVPFR----LKPVFDNQFLLETAAPLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISATDADSGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAVVTLSLVNARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKP----VFVIPSNNYSYDLVQTSTSP--GSVVARVYAIDNDTGINADLRYSIIGGNSRGLFAIGERSGNITLKEKLLAGDHGVLYKLVIKVNDSGKPEPFHTIAFVHLFVNETITNGSYIQELVRKSKETAVGEDFRDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPR 860
BLAST of Protocadherin-11 X-linked vs. Ensembl Xenopus
Match: vapa (VAMP associated protein A [Source:Xenbase;Acc:XB-GENE-990155]) HSP 1 Score: 275.404 bits (703), Expect = 4.169e-77 Identity = 239/846 (28.25%), Postives = 386/846 (45.63%), Query Frame = 3 Query: 30 VNFRYFFFLYMLVILHFWCIISIKPFATNLLDQIGINFTYSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGEL---------STVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLL--TNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY 2522 +N R F+ L L+ C+ L I Y++ EE + +GNI DL + + + +L + S+A ++ S+ + ++DREKLC +G + EN+ CF + + +L + ++ I++IV D NDN P+F I I E + + IP A+D D N Y L N + F + ++ K L Q LDRE+KD Y++ I+ D G P S ++ L V + D+ND++P F KES + V I E A IG ++ + A D DIG+N+++++ ++T S F +N +TG I V LDRE L V+ +D S P +T+ + D NDN P I+ +II G + + + I D D+ +S C + E ++K + L T+S+LD E I +S I+ D G P L+ + L+ + + D+NDN P F + E+ V EN + + ASD D G N+D++Y + N F +++ +G L D E ++ T+ +D G+P + A V VT+ D ND P V+E++PK + V ++ D D G V++++L FV + L +N+ FDRE Y+ V D GQP +++ +TI I D NDN P ++ SP S + + S G +A ++ D D NA+L Y + + K F + P +GN+ L S +D+G RLV+ + D G P+ L L+ V+ + N Y Sbjct: 1 MNLRDFYLLAALIA----CL--------RLDSAIAQELIYTIREELPENVPIGNIPKDLNISHI-NAATGSSTSLVYRLVSKAGDS-PLVKVSSSTGEIFTTSTRIDREKLC-------------AGSSNSDENE---CFFELEVVILP-NDFFRLIKIKIIVKDTNDNAPMFPSTVINISIPENTLIN--SRFPIPSAVDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAI-LQVTVSDVNDNKPVF-KESQ--VEVHIPENAPIGTSVVQLHATDADIGSNAEIKYIFGAQVT-SATKRLFALNNTTGLITVQRPLDREETAVHKLTVLATDGSSTPAR--ATVTINVTDVNDNPPNIDL--RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNSKVIC--------------FIEREVPFHLKAVYDNQYLLETSSLLDYEGIKEFSFKIVAADTGKPSLNQTALVRVELEDENDNPPIFSQPVIELSVSENNRRGLYLTTVSASDEDSGKNSDIVYQLGPNASF-FDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITATDSDAGENKAVTLSILNDNENFVLDPYSGLIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAKVTINIMDANDNSP----VVISPPSNTSFKLVPLSAIP--GSVVAEVFAVDTDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPSAADVGLHRLVVNISDLGYPKPLHTLVLVFLYVNETAGNASY 783
BLAST of Protocadherin-11 X-linked vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 256.144 bits (653), Expect = 1.961e-70 Identity = 223/799 (27.91%), Postives = 373/799 (46.68%), Query Frame = 3 Query: 144 TYSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMI-IVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQ---SIPIAIDQDIELNAKILYRL---TNHKDKFTIKYIQIANELK--IAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELST----------VGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITN--VDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRN--LNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEP---IGFSIATIYFHDDDINQNAQLTYFIHESEKPY--FILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTP 2456 Y + EEQ P I +G++ D L +LE P+ + K IY + +DRE L Q N+E K CF+ +S+ + + ++ ++ + DINDN P F P T+ I P + N IP A D+D +N Y L +D F ++ + +E + + + LDRE++D Y + I+ D G P S +L L ++I+D ND+ P+F K + + E + +G ++ + A+D+D G N+++ +S ++ + H +++STG I V +DRE ++ V+ D G+ P++ +T+ I D NDN P IE F + ++G ++ V ++ D+D G ++ +C + P F+L V+ + KK + L TT+ LD E++ Y++ I+ D+G+P LS++ + + V+D NDN P F +S E+ EN V+++ A+D D G N+ L Y I+ + F IN SG + +D E+ + + D+G PS TA V +T+ D ND P + N SV E+MP+ + V ++VID D G + +++ P +FV +N +L+++ FDRE Y+ + D G P ++ + +TI + D NDN P V + IS+ Y P G + + D D NA+L Y I S P+ F + ++G + L G RLV+KV D G P Sbjct: 70 AYRVPEEQPPNILIGSLASDYGYPDSKHLYKLE----LGHPYLRVDGKTGDIY---------TTETSIDRESLRECQ---------------NLEPGEK-CFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSI-----PENTNIGMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSAL-LRISILDTNDNAPKFEKMAY---EAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRLLH--LDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEI-RGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVP---FQLKQVSDTGSDSKKK-----YFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAP----------VIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSI-ASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKP 808 HSP 2 Score: 132.494 bits (332), Expect = 1.025e-30 Identity = 126/476 (26.47%), Postives = 217/476 (45.59%), Query Frame = 3 Query: 1182 INDENDNAPFIECPENFIIEENRGELSTVGFI----KAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVD---HTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPP-------SLVSYSMN-PSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVAL---LPWENKFVF-------RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI--HESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAI 2528 I D NDN P P +I + E + +G + A D DSG + S +LI + P + L + + K+ +L +LDRE +Y L I D G+P ++S L+ I + D NDN P F + +E ++ EN SVL++KA+D+D G+NA++ Y D +++++G + PID E + ++ KD+G+ T V +TI+D ND P LV++ +++E +P T V + V D D G V+ + +P++ K V + L T D E +Y+I ++ D+G P L+++ L + ++D+NDN P + + + F I + + D D N+QL Y I S + F ++PDSG +++N+ + + D G P L ++I V+D ++P + + Sbjct: 166 IMDINDNTPNFNSP---VITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYELI-VGP-EAQDLFGLQVAEDQDEKQP-----QLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSL---------MEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFML 622 HSP 3 Score: 64.6994 bits (156), Expect = 7.619e-10 Identity = 65/243 (26.75%), Postives = 107/243 (44.03%), Query Frame = 3 Query: 498 VTIRVIVNDINDNPPIFQLP--NFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIEC 1220 ++ + V D NDN P F L NF++M E P + + ID D NA I + +F I+ I + DRE + Y ++A+D G P S + +T+N++D ND+ P S N+ +++ Q G + + A D D G N++L +S+ E F I+ + G + + + R+ Y L V V+D G P R + + IN+ N +E Sbjct: 604 ASVVITVLDRNDNDPKFMLNGYNFSVM---ENMPR-LSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQ----NGTGTILSSISFDREHQSTYTFRLKAVDGGDP-PRSSYVGVTINVLDENDNAPVIVVPS-NISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSI----ASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALVHFYINETLTNQTLVET 832
BLAST of Protocadherin-11 X-linked vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 291.197 bits (744), Expect = 1.118e-82 Identity = 253/897 (28.21%), Postives = 415/897 (46.27%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRL----DKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-----FIECPEN--FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEP---IGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTP-RLFSLL-----------------ELIIHVVDGP---------SSNP--DYAIITNFRIVLIVIPTLIGISFSVILLFVIKTVQKQ--KANRLINHNTKQIYTKKEN 2684 Y++ EE + +G+++ DL L DK L+ T F + +I + + ++DREKLC +G + + CF + +++L E +V IR ++ DINDN P+F I I E A + + S+P AID DI +N Y+L ++ F + I+ K+ L + LDRE+KD Y++ ++ D G P S ++ L V++ D ND+ P F ++ I V I E A IG ++ + A D DIG N+++ F + L + A F +N +TG I V LDRE S L V+ +D GS P ++ + V D NDN P +I P N ++ EN + + I D DS + +C + P F+L V F L T + LD E+ Y++ +L D G P L+ S ++ I V D+NDN P F +S + V EN + + K+ A+D D G NA++ Y + + F ++Q +G L ++ +D E+ ++ T+ +D G P + A V VT+ D ND P N V E +PK V ++V DPD G V++++L ++F ++ + N+ FDRE + Y+ V D G+ +++ +TI + D+NDN+P I P SF + P G + + DDDI NA++ Y + + K F++ SGN+ L C VSDLG R+++K D G P LF+++ EL+ +D P +S+P DY +I++ ++ I + + + V++ Q KA++ N++ + EN Sbjct: 28 YTVREEMPENVLIGDLLKDLNLSLIPDKSLT-------TPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLC-------------AGIVLDAR-----CFYEVEVAVLP-DEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAIN--SRYSLPAAIDPDIGINGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI-LQVSVADTNDNHPIFIEKE---IEVSIPENAPIGSSVTQLHATDADIGENARIHFYFS-NLVSNIAKRLFHLNTTTGLITVKEPLDREESPSHKLLVLATDGGSTPARATVLVNV--TDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEVP---FRLRPVFSNQ-----------FLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPI---FIDPPS------NYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGLHRVIVKANDLGQPDSLFNVVNVNFFINESVPNATLIYELVRRSIDAPANQNTETTSASSPTTDYV-----KIMVAIVAGTITVVLVIFITAVVRCRQPPHLKASQKNKQNSEWVTPNPEN 861
BLAST of Protocadherin-11 X-linked vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 291.197 bits (744), Expect = 3.705e-82 Identity = 255/899 (28.36%), Postives = 416/899 (46.27%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRL----DKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIIN--DENDNAP-----FIECPEN--FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEP---IGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTP-RLFSLL-----------------ELIIHVVDGP---------SSNP--DYAIITNFRIVLIVIPTLIGISFSVILLFVIKTVQKQ--KANRLINHNTKQIYTKKEN 2684 Y++ EE + +G+++ DL L DK L+ T F + +I + + ++DREKLC +G + + CF + +++L E +V IR ++ DINDN P+F I I E A + + S+P AID DI +N Y+L ++ F + I+ K+ L + LDRE+KD Y++ ++ D G P S ++ L V++ D ND+ P F ++ I V I E A IG ++ + A D DIG N+++ F + L + A F +N +TG I V LDRE S L V+ +D GS P TV++N D NDN P +I P N ++ EN + + I D DS + +C + P F+L V F L T + LD E+ Y++ +L D G P L+ S ++ I V D+NDN P F +S + V EN + + K+ A+D D G NA++ Y + + F ++Q +G L ++ +D E+ ++ T+ +D G P + A V VT+ D ND P N V E +PK V ++V DPD G V++++L ++F ++ + N+ FDRE + Y+ V D G+ +++ +TI + D+NDN+P I P SF + P G + + DDDI NA++ Y + + K F++ SGN+ L C VSDLG R+++K D G P LF+++ EL+ +D P +S+P DY +I++ ++ I + + + V++ Q KA++ N++ + EN Sbjct: 28 YTVREEMPENVLIGDLLKDLNLSLIPDKSLT-------TPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLC-------------AGIVLDAR-----CFYEVEVAVLP-DEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAIN--SRYSLPAAIDPDIGINGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI-LQVSVADTNDNHPIFIEKE---IEVSIPENAPIGSSVTQLHATDADIGENARIHFYFS-NLVSNIAKRLFHLNTTTGLITVKEPLDREESPSHKLLVLATDGGSTP----ARATVLVNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEVP---FRLRPV-----------FSNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPI---FIDPPS------NYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGLHRVIVKANDLGQPDSLFNVVNVNFFINESVPNATLIYELVRRSIDAPANQNTETTSASSPTTDYV-----KIMVAIVAGTITVVLVIFITAVVRCRQPPHLKASQKNKQNSEWVTPNPEN 861
BLAST of Protocadherin-11 X-linked vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 289.271 bits (739), Expect = 7.163e-81 Identity = 255/899 (28.36%), Postives = 416/899 (46.27%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRL----DKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIIN--DENDNAP-----FIECPEN--FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEP---IGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTP-RLFSLL-----------------ELIIHVVDGP---------SSNP--DYAIITNFRIVLIVIPTLIGISFSVILLFVIKTVQKQ--KANRLINHNTKQIYTKKEN 2684 Y++ EE + +G+++ DL L DK L+ T F + +I + + ++DREKLC +G + + CF + +++L E +V IR ++ DINDN P+F I I E A + + S+P AID DI +N Y+L ++ F + I+ K+ L + LDRE+KD Y++ ++ D G P S ++ L V++ D ND+ P F ++ I V I E A IG ++ + A D DIG N+++ F + L + A F +N +TG I V LDRE S L V+ +D GS P TV++N D NDN P +I P N ++ EN + + I D DS + +C + P F+L V F L T + LD E+ Y++ +L D G P L+ S ++ I V D+NDN P F +S + V EN + + K+ A+D D G NA++ Y + + F ++Q +G L ++ +D E+ ++ T+ +D G P + A V VT+ D ND P N V E +PK V ++V DPD G V++++L ++F ++ + N+ FDRE + Y+ V D G+ +++ +TI + D+NDN+P I P SF + P G + + DDDI NA++ Y + + K F++ SGN+ L C VSDLG R+++K D G P LF+++ EL+ +D P +S+P DY +I++ ++ I + + + V++ Q KA++ N++ + EN Sbjct: 28 YTVREEMPENVLIGDLLKDLNLSLIPDKSLT-------TPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLC-------------AGIVLDAR-----CFYEVEVAVLP-DEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAIN--SRYSLPAAIDPDIGINGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI-LQVSVADTNDNHPIFIEKE---IEVSIPENAPIGSSVTQLHATDADIGENARIHFYFS-NLVSNIAKRLFHLNTTTGLITVKEPLDREESPSHKLLVLATDGGSTP----ARATVLVNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEVP---FRLRPV-----------FSNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPI---FIDPPS------NYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGLHRVIVKANDLGQPDSLFNVVNVNFFINESVPNATLIYELVRRSIDAPANQNTETTSASSPTTDYV-----KIMVAIVAGTITVVLVIFITAVVRCRQPPHLKASQKNKQNSEWVTPNPEN 861
BLAST of Protocadherin-11 X-linked vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 288.886 bits (738), Expect = 9.135e-81 Identity = 255/899 (28.36%), Postives = 416/899 (46.27%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRL----DKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIIN--DENDNAP-----FIECPEN--FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEP---IGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTP-RLFSLL-----------------ELIIHVVDGP---------SSNP--DYAIITNFRIVLIVIPTLIGISFSVILLFVIKTVQKQ--KANRLINHNTKQIYTKKEN 2684 Y++ EE + +G+++ DL L DK L+ T F + +I + + ++DREKLC +G + + CF + +++L E +V IR ++ DINDN P+F I I E A + + S+P AID DI +N Y+L ++ F + I+ K+ L + LDRE+KD Y++ ++ D G P S ++ L V++ D ND+ P F ++ I V I E A IG ++ + A D DIG N+++ F + L + A F +N +TG I V LDRE S L V+ +D GS P TV++N D NDN P +I P N ++ EN + + I D DS + +C + P F+L V F L T + LD E+ Y++ +L D G P L+ S ++ I V D+NDN P F +S + V EN + + K+ A+D D G NA++ Y + + F ++Q +G L ++ +D E+ ++ T+ +D G P + A V VT+ D ND P N V E +PK V ++V DPD G V++++L ++F ++ + N+ FDRE + Y+ V D G+ +++ +TI + D+NDN+P I P SF + P G + + DDDI NA++ Y + + K F++ SGN+ L C VSDLG R+++K D G P LF+++ EL+ +D P +S+P DY +I++ ++ I + + + V++ Q KA++ N++ + EN Sbjct: 28 YTVREEMPENVLIGDLLKDLNLSLIPDKSLT-------TPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLC-------------AGIVLDAR-----CFYEVEVAVLP-DEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAIN--SRYSLPAAIDPDIGINGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI-LQVSVADTNDNHPIFIEKE---IEVSIPENAPIGSSVTQLHATDADIGENARIHFYFS-NLVSNIAKRLFHLNTTTGLITVKEPLDREESPSHKLLVLATDGGSTP----ARATVLVNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEVP---FRLRPV-----------FSNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPI---FIDPPS------NYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGLHRVIVKANDLGQPDSLFNVVNVNFFINESVPNATLIYELVRRSIDAPANQNTETTSASSPTTDYV-----KIMVAIVAGTITVVLVIFITAVVRCRQPPHLKASQKNKQNSEWVTPNPEN 861
BLAST of Protocadherin-11 X-linked vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 288.886 bits (738), Expect = 1.147e-80 Identity = 255/899 (28.36%), Postives = 416/899 (46.27%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRL----DKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIIN--DENDNAPFIEC-----PEN--FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEP---IGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTP-RLFSLL-----------------ELIIHVVDGP---------SSNP--DYAIITNFRIVLIVIPTLIGISFSVILLFVIKTVQKQ--KANRLINHNTKQIYTKKEN 2684 Y++ EE + +G+++ DL L DK L+ T F + +I + + ++DREKLC +G + + CF + +++L E +V IR ++ DINDN P+F I I E A + + S+P AID DI +N Y+L ++ F + I+ K+ L + LDRE+KD Y++ ++ D G P S ++ L V++ D ND+ P F ++ I V I E A IG ++ + A D DIG N+++ F + L + A F +N +TG I V LDRE S L V+ +D GS P TV++N D NDN P I+ P N ++ EN + + I D DS + +C + P F+L V F L T + LD E+ Y++ +L D G P L+ S ++ I V D+NDN P F +S + V EN + + K+ A+D D G NA++ Y + + F ++Q +G L ++ +D E+ ++ T+ +D G P + A V VT+ D ND P N V E +PK V ++V DPD G V++++L ++F ++ + N+ FDRE + Y+ V D G+ +++ +TI + D+NDN+P I P SF + P G + + DDDI NA++ Y + + K F++ SGN+ L C VSDLG R+++K D G P LF+++ EL+ +D P +S+P DY +I++ ++ I + + + V++ Q KA++ N++ + EN Sbjct: 28 YTVREEMPENVLIGDLLKDLNLSLIPDKSLT-------TPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLC-------------AGIVLDAR-----CFYEVEVAVLP-DEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAIN--SRYSLPAAIDPDIGINGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI-LQVSVADTNDNHPIFIEKE---IEVSIPENAPIGSSVTQLHATDADIGENARIHFYFS-NLVSNIAKRLFHLNTTTGLITVKEPLDREESPSHKLLVLATDGGSTP----ARATVLVNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEVP---FRLRPV-----------FSNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPI---FIDPPS------NYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGLHRVIVKANDLGQPDSLFNVVNVNFFINESVPNATLIYELVRRSIDAPANQNTETTSASSPTTDYV-----KIMVAIVAGTITVVLVIFITAVVRCRQPPHLKASQKNKQNSEWVTPNPEN 861
BLAST of Protocadherin-11 X-linked vs. UniProt/SwissProt
Match: sp|Q6KEQ9|PC11X_PIG (Protocadherin-11 X-linked OS=Sus scrofa OX=9823 GN=PCDH11X PE=2 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 1.232e-77 Identity = 230/795 (28.93%), Postives = 371/795 (46.67%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYK---------DSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIEC-----PEN--FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEP---IGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTP 2456 Y++ EE + +G+++ DL +L + + +LT +F ++YK + + ++DREKLC +G + + CF + +++L E +V IR ++ DINDN P+F I I E A + + ++P ID D +N Y L + F + I+ K+ L + LDRE+KD Y++ I+ D G P S ++ L V++ D ND++P F + N I V I E A +G ++ + A D DIG N+K+ F + L + A + F +N +TG I + LDRE + L V+ SD G P + +M L V + D NDN P I+ P N ++ EN + + I D D+ + SC + P F+L V F L T + LD E+ Y++ +L D G P L+ S ++ I V D+NDN P F + + V EN + + K+ A D D G NA++ Y + + F ++ +G L ++ +D E+ ++ + T+ KD G P T A V VT+ D ND P N V E++P+ V ++V DPD G V +++L + F + + N+ FDRE + Y+ V D G+ +++ +TI + D+NDN+P + + SF P G + T+ D+D NA+L Y + + K FI+ SGN+ L C +DLG RLV+K +D G P Sbjct: 28 YTIREEMPENVLIGDLLKDL------NLSLIPDRSLT------TPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLC-------------AGIVVDAH-----CFYEVEVAVLP-DEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAIN--SRYALPATIDPDTGINGVQNYHLIKGQSIFGLDVIETPEGEKMPQLIVQKELDREEKDTYVMKIKVEDGGFPQRSSTAI-LQVSVADTNDNRPVFKE---NEIEVSIPENAPVGSSVTQLHATDADIGENAKIHFYFS-NLISNMAKKLFHLNSTTGLITIKEPLDREESPNHKLLVLASDGGLTP-ARAMVL-VNVTDINDNIPSIDIRYIINPINGTVVLSENAPLNTKIALITVTDKDADHNGWVSCFTDHEVP---FRLRPV-----------FSNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQPFLSLSVPENNSPGTQLTKISAMDADSGRNAEINYLLGFDAPSEFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPPLMTNATVLVTVLDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGENSAVILSILDANDDFTIDPQTGVIQPNISFDREKQESYTFYVKAEDGGRISRSSTAKVTINVVDVNDNKPVFV---------VPSSNYSFELVPPSTNPGTVVFTVVAIDNDTGMNAELRYSMVGGNTKGLFIIDQTSGNITLKEKCVFADLGLHRLVVKAKDLGQP 759
BLAST of Protocadherin-11 X-linked vs. UniProt/SwissProt
Match: sp|Q6X862|PC11X_GORGO (Protocadherin-11 X-linked OS=Gorilla gorilla gorilla OX=9595 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 3.147e-75 Identity = 247/886 (27.88%), Postives = 412/886 (46.50%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIEC-----PEN--FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPI-GFSIATIYFH----DDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTP-RLFSLL-----------------ELIIHVVDGP-SSNPDYAIITNFR--IVLIVIPTLIGISFSVILLFVIKTVQKQKANRLINHNTKQIYTKKENS 2687 Y++ EE + +G+++ DL L ++ K L T F + +I + + ++DREKLC + D CF + +++L E +V IR ++ DINDN P+F I I E A + + ++P A+D D+ +N Y L ++ F + I+ K+ L + LDREKKD Y++ ++ D G P S ++ L V++ D ND+ P F + I V I E A +G ++ + A D DIG N+K+ FS + L + A F +N +TG I + LDRE + L V+ SD G P + +M L V + D NDN P I+ P N ++ EN + + I D D+ + +C + P F+L V F L T + LD E+ Y++ +L D G P L+ S ++ I V D+NDN P F +S + + EN + K+ A+D D G NA++ Y + + F +++ +G L ++ +D E+ + TI KD G P T+ V V+I D ND P N V E++P+ V ++V DPD G V++++L + F + + N+ FDRE + Y+ V D G+ ++S +TI + D+NDN+P V SN +SY+ + + T+ F D+D NA++ Y + + + F + ++GN+ L C V+DLG R+++K D G P LFS++ EL+ ++ P + N + A +++ V I++ + G V+++F+ V+ ++A L K K+NS Sbjct: 28 YTIREEMPENVLIGDLLKDLNL-SLIPNKSL--TTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLC-----------------AGIPRDEH-CFYEVEVAILP-DEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAIN--SKYTLPAAVDPDVGINGVQNYELIKSQNMFGLDVIETPEGDKMPQLIVQKELDREKKDTYVMKVKVEDGGFPQRSSTAI-LQVSVTDTNDNHPVFKETE---IEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFS-NLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMP-ARAMVL-VNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIP---FRLRPV-----------FSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFI-------VPPSN----YSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTNDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHL-----KAAQKNKQNS 852
BLAST of Protocadherin-11 X-linked vs. UniProt/SwissProt
Match: sp|Q71M42|PC11X_PANTR (Protocadherin-11 X-linked OS=Pan troglodytes OX=9598 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 4.783e-74 Identity = 245/886 (27.65%), Postives = 409/886 (46.16%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIEC-----PEN--FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPI-----GFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTP-RLFSLL-----------------ELIIHVVDGP-SSNPDYAIITN--FRIVLIVIPTLIGISFSVILLFVIKTVQKQKANRLINHNTKQIYTKKENS 2687 Y++ EE + +G+++ DL L ++ K L T F + +I + + ++DREKLC + D CF + +++L E +V IR ++ DINDN P+F I I E A + + ++P A+D D+ N Y L ++ F + I+ K+ L + LDRE+KD Y++ ++ D G P S ++ L V++ D ND+ P F + I V I E A +G ++ + A D DIG N+K+ FS + L + A F +N +TG I + LDRE + L V+ SD G P + +M L V + D NDN P I+ P N ++ EN + + I D D+ + +C + P F+L V F L T + LD E+ Y++ +L D G P L+ S ++ I V D+NDN P F +S + + EN + K+ A+D D G NA++ Y + + F +++ +G L ++ +D E+ + TI KD G P T+ V V+I D ND P N V E++P+ V ++V DPD G V++++L + F + + N+ FDRE + Y+ V D G+ ++S +TI + D+NDN+P V SN +SY+ + G + + D+D NA++ Y + + + F + ++GN+ L C V+DLG R+++K D G P LFS++ EL+ + P + N + A +++ V I++ + G V+++F+ V+ ++A L K K+NS Sbjct: 28 YTIREEMPENVLIGDLLKDLNL-SLIPNKSL--TTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLC-----------------AGIPRDEH-CFYEVEVAILP-DEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAIN--SKYTLPAAVDPDVGTNGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI-LQVSVTDTNDNHPVFKETE---IEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFS-NLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMP-ARAMVL-VNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIP---FRLRPV-----------FSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFI-------VPPSN----YSYELVLPSTNPGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHL-----KAAQKNKQNS 852
BLAST of Protocadherin-11 X-linked vs. UniProt/SwissProt
Match: sp|Q6WYY1|PC11X_PANPA (Protocadherin-11 X-linked OS=Pan paniscus OX=9597 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 5.293e-74 Identity = 245/886 (27.65%), Postives = 409/886 (46.16%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIEC-----PEN--FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPI-----GFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTP-RLFSLL-----------------ELIIHVVDGP-SSNPDYAIITN--FRIVLIVIPTLIGISFSVILLFVIKTVQKQKANRLINHNTKQIYTKKENS 2687 Y++ EE + +G+++ DL L ++ K L T F + +I + + ++DREKLC + D CF + +++L E +V IR ++ DINDN P+F I I E A + + ++P A+D D+ N Y L ++ F + I+ K+ L + LDRE+KD Y++ ++ D G P S ++ L V++ D ND+ P F + I V I E A +G ++ + A D DIG N+K+ FS + L + A F +N +TG I + LDRE + L V+ SD G P + +M L V + D NDN P I+ P N ++ EN + + I D D+ + +C + P F+L V F L T + LD E+ Y++ +L D G P L+ S ++ I V D+NDN P F +S + + EN + K+ A+D D G NA++ Y + + F +++ +G L ++ +D E+ + TI KD G P T+ V V+I D ND P N V E++P+ V ++V DPD G V++++L + F + + N+ FDRE + Y+ V D G+ ++S +TI + D+NDN+P V SN +SY+ + G + + D+D NA++ Y + + + F + ++GN+ L C V+DLG R+++K D G P LFS++ EL+ + P + N + A +++ V I++ + G V+++F+ V+ ++A L K K+NS Sbjct: 28 YTIREEMPENVLIGDLLKDLNL-SLIPNKSL--TTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLC-----------------AGIPRDEH-CFYEVEVAILP-DEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAIN--SKYTLPAAVDPDVGTNGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI-LQVSVTDTNDNHPVFKETE---IEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFS-NLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMP-ARAMVL-VNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIP---FRLRPV-----------FSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFI-------VPPSN----YSYELVLPSTNPGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHL-----KAAQKNKQNS 852
BLAST of Protocadherin-11 X-linked vs. UniProt/SwissProt
Match: sp|Q9BZA8|PC11Y_HUMAN (Protocadherin-11 Y-linked OS=Homo sapiens OX=9606 GN=PCDH11Y PE=1 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 1.516e-73 Identity = 238/866 (27.48%), Postives = 403/866 (46.54%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIEC-----PEN--FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTP-RLFSLL-----------------ELIIHVVDGP-SSNPDYAIITN--FRIVLIVIPTLIGISFSVILLFVIKTVQKQKANRL 2642 Y++ EE + +GN++ DL L ++ K L T F + +I + + ++DREKLC + D CF + +++L E +V IR ++ DINDN P+F I I E A + + ++P A+D D+ +N Y L ++ F + I+ K+ L + LDRE+KD Y++ ++ D G P S ++ L V++ D ND+ P F + I V I E A +G ++ + A D DIG N+K+ FS + L + A F +N +TG I + LDRE + L V+ SD G P + +M L V + D NDN P I+ P N ++ EN + + I D D+ + +C + P F+L V F L + LD E+ Y++ +L D G P L+ S ++ I V D+NDN P F +S + + EN ++K+ A+D D G NA++ Y + + F +++ +G L ++ +D E+ + TI KD G P T+ V V+I D ND P V E++P+ V ++V DPD G V++++L + F + + N+ FDRE + Y+ V D G+ ++S +TI + D+NDN+P + P S + + S G + + D+D NA++ Y + + + F + ++GN+ L C V+DLG R+++K D G P LFS++ EL+ ++ P + N + A +++ V I++ + G V+++F+ V+ ++A L Sbjct: 60 YTIREEIPENVLIGNLLKDLNL-SLIPNKSL--TTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLC-----------------AGIPRDEH-CFYEVEVAILP-DEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAIN--SKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI-LQVSVTDTNDNHPVFKETE---IEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFS-NLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMP-ARAMVL-VNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIP---FRLRPV-----------FSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKP----VFIVPPYNYSYELVLPSTNP--GTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHL 874
BLAST of Protocadherin-11 X-linked vs. TrEMBL
Match: A0A1L8F7N2 (Uncharacterized protein OS=Xenopus laevis OX=8355 GN=XELAEV_18038901mg PE=4 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 1.140e-81 Identity = 259/900 (28.78%), Postives = 418/900 (46.44%), Query Frame = 3 Query: 57 YMLVILHFWCIISIKPFATNLLDQIGINFTYSMNEEQDPPIYLGNIIHDLRL--DKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGEL---------STVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI-HESEKPYFILHPDSGNLKLNSTCSVSDLGS-FRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY-----------AIITNFR----------IVLIVIPTLIGISFSVILLFVIKTVQKQKANR 2639 Y+L +L CI+ F + ++ Y + E+Q + +GN++ DL L D +SL +T F + +I D + ++DREKLC S IF+ +NK CF + +++L E +V IR ++ DINDNPP+F I I E A + + S+P AID D+ +N Y L ++ F + I+ K L Q+LDRE+KD Y++ I+ D G P S ++ L V + D+ND++P F ++ I V I E A +G ++ + A D D+G N+K+ F ++T+ A HF I+ +TG I V LDRE L V+ SD S P + +T+ I D NDN P I+ +II G + + + I D D+ + +C F +V +K F L T + LD E+ Y++ I+ D+G P L+ S ++ I + D+NDN P F + VEN + + K+ A+D D G NA+L Y + N F +++ +G L + +D E+ + T T+ KD G+PS T V +++ D ND PS N V E++P V ++V D D G V+++L+ + F+ L + N+ FDRE Y+ V D G P+ ++++ +TI + D+NDN+P + P S + + S G +A ++ D+D NA L Y I + + F + SGN+ L D GS ++LVIKV D+G P F + + V+ +N Y A+ +FR V I+I + G ++++FV V+ ++ R Sbjct: 8 YLLAVL-IACIV----FESGAQEK-----KYIVREDQQENVLIGNLLKDLNLTLDSAISL-----STPLQFKLVYKTGDVPLIRVDENTGEIFTTSNRIDREKLC--------SGIFT---------ENK-CFYEVEVAVLP-DEVFRLVKIRFLIEDINDNPPLFPSTVINISIPENTAVN--SRYSVPSAIDPDVGVNGIQHYELLKGQNVFGLDVIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAI-LQVTVTDVNDNRPVFKEKD---IEVNIPEDAAVGMSVTQLHATDADLGLNAKIHFYFGNQITN-LAKRHFAIDNNTGLITVKEPLDREESPYHKLTVLASDGSSTP--SRATVTINITDINDNIPSIDT--RYIINPVNGTVLLSEKAPLNTKIALITVTDKDADLNGKVTC----------FTDHDVPFR----LKPVFDNQFLLETAAPLDYESTREYAIKIVASDSGKPSLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISATDADSGRNAELSYTLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADYGENAVVTLSLVNARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKP----VFVVPSNNYSYELVQTSTSP--GSVVARVHAIDNDTGINADLRYSILGGNPRGLFAIGEKSGNITLKEKLLAGDHGSLYKLVIKVNDSGKPEPFHTIAFVHLFVNDTITNGSYVQELVRKSKETAVGEDFRDGEITPETNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPR 842
BLAST of Protocadherin-11 X-linked vs. TrEMBL
Match: A0A3P8YZ51 (Protocadherin 11 OS=Esox lucius OX=8010 PE=4 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 3.833e-81 Identity = 237/796 (29.77%), Postives = 383/796 (48.12%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIIN--DENDNAPFIECP-------ENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISF--SYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELI 2483 Y++ EEQ + +GN+ DL L+ +K + L F P + + ++ +++ + ++DREKLC S +F + K CF I +++L E +V IR ++ DINDN P+FQ I I E A + Y +P A D D+ +N Y L +F + I+ K L Q+LDRE+KD +++ I+ D G P S ++ L V I D+ND++P F + V + E A G ++ + A D D+G+N+++ FS + +++ S HF I+ +TG I V LDRE L V+ SD GS S TVI+N D NDN P I+ ++ EN + + I D DS + +C + P F+L V + F L T + LD E Y++ I+ D+G P L+ S ++ I + D+NDN P F + + ++ + EN S ++K+ A+D D G NA++LY + + F I++ SG L + +D ER ++ + T+ +D GS S + V + ++D+ND P+ N V E++P V ++V D D G +++++L ++ FV + + N+ FDRE Y+ +V D GQP T+ +TI + D+NDNRP + SN + S P G + ++ D+D NA+L Y I S++ F + +GN+ L SD G RLV+KV+D G P + LI Sbjct: 28 YTVREEQPENVRIGNLRRDLDLNLDPDVKL--SSPLQFKPVYK-TGDVPLVRVEASTGEIFTTAHRIDREKLC--------SGVF----------NEKRCFYEIEVAVLP-DEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTA-INTRY-PVPSAFDPDVGINGIQHYELVKSVSEFGLDIIETPEGDKWPQLIVQQSLDREQKDTFVMKIKVEDGGTPPKSSTAI-LQVTISDVNDNRPVFKDSE---VEVNVPENAPTGTSVTQLHATDADLGSNAQIHFSFSNQVSLS-TKRHFSIDSTTGLITVKQTLDREAAPVHKLIVLASDGGS----TSSRATVIVNVTDINDNVPSIDTRYIINLVNGTVLLSENAPLKTKIALITVTDKDSDLNGKVTCYTDHDIP---FRLKPVFNDQ-----------FLLETAAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPIFPQPDIQLSIPENNEPSSELIKISATDADSGHNAEILYSLAPDAPDCFNIDKRSGVLSVAKRLDRERQEKYSFTVLARDNGSTSLQSNITVKLIVQDLNDNSPAFTHPEYNFYVPENLPLSGTVGLITVTDSDAGDNAVITLSILNGKDNFVIDPQTGVIKPNITFDREQQSSYTFMVKATDGGQPPSTSYAKVTINVVDVNDNRPVFV-------IPSSNYSYDLVQSTTSP-GAVVTRVFAIDNDTGMNAELQYSIIGGSQRGLFAIDKTTGNITLQEKIVSSDQGLHRLVVKVKDLGQPESLHAIALI 768 HSP 2 Score: 162.54 bits (410), Expect = 7.445e-37 Identity = 164/598 (27.42%), Postives = 269/598 (44.98%), Query Frame = 3 Query: 807 PDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTG----AIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFI-IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLS---NVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKA-------SDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIE---PIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF----RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQE--PIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAI 2528 PD + + + I DIND+ P F +I++ I E I A D D+G N + L + +++ + ++ I G + V LDRE ++ + + V D G+PP+S++ L V I+D NDN P + E + + EN ++V + A D D G+++ I+ +N LS + +++STT + ++ LDRE + L++L D GS S+ + + V+D NDN+P + + I +V V LS LK +D D +N + + T+ D F + D + +E P+D+E ++ I I D G P T+A V + IKD ND P + S+ E+ + + +S D D+G E+ +L P + F R+ L DRE +KYS V+ RDNG L ++I + + + D+NDN P TH +F E P+ ++ I D D NA +T I K F++ P +G +K N T S+ ++K D G P S ++ I+VVD + P + I Sbjct: 116 PDEIFRLVKIRFLIEDINDNAPLFQS---TVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVKSVSE-FGLD--IIETPEGDKWPQLIVQQSLDREQKDTFVMKIKVEDGGTPPKSSTAILQVTISDVNDNRPVFKDSEVEVNVPENAPTGTSVTQLHATDADLGSNAQ-----IHFSFSNQVSLSTKRHFSIDSTTGL---------ITVKQTLDREAAPVHKLIVLASDGGS--TSSRATVIVNVTDINDNVPSID-TRYIINLVNGTVLLSENAPLKTKIALITVTDKDSDLNGKVTCY--TDHDIPFRLKPVFNDQFLLETAAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPIFPQPDIQLSIPENNEPSSELIKISATDADSGHNAEILYSLAP-DAPDCFNIDKRSGVLSVAKRLDRERQEKYSFTVLARDNGSTSLQSNITVKLIVQDLNDNSPAFTH-----------PEYNFYVPENLPLSGTVGLITVTDSDAGDNAVITLSILNG-KDNFVIDPQTGVIKPNITFDREQQSSYTFMVKATDGGQPPSTSYAKVTINVVDVNDNRPVFVI 675
BLAST of Protocadherin-11 X-linked vs. TrEMBL
Match: A0A3P8YZ64 (Protocadherin 11 OS=Esox lucius OX=8010 PE=4 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 3.964e-81 Identity = 237/796 (29.77%), Postives = 383/796 (48.12%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIIN--DENDNAPFIECP-------ENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISF--SYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELI 2483 Y++ EEQ + +GN+ DL L+ +K + L F P + + ++ +++ + ++DREKLC S +F + K CF I +++L E +V IR ++ DINDN P+FQ I I E A + Y +P A D D+ +N Y L +F + I+ K L Q+LDRE+KD +++ I+ D G P S ++ L V I D+ND++P F + V + E A G ++ + A D D+G+N+++ FS + +++ S HF I+ +TG I V LDRE L V+ SD GS S TVI+N D NDN P I+ ++ EN + + I D DS + +C + P F+L V + F L T + LD E Y++ I+ D+G P L+ S ++ I + D+NDN P F + + ++ + EN S ++K+ A+D D G NA++LY + + F I++ SG L + +D ER ++ + T+ +D GS S + V + ++D+ND P+ N V E++P V ++V D D G +++++L ++ FV + + N+ FDRE Y+ +V D GQP T+ +TI + D+NDNRP + SN + S P G + ++ D+D NA+L Y I S++ F + +GN+ L SD G RLV+KV+D G P + LI Sbjct: 28 YTVREEQPENVRIGNLRRDLDLNLDPDVKL--SSPLQFKPVYK-TGDVPLVRVEASTGEIFTTAHRIDREKLC--------SGVF----------NEKRCFYEIEVAVLP-DEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTA-INTRY-PVPSAFDPDVGINGIQHYELVKSVSEFGLDIIETPEGDKWPQLIVQQSLDREQKDTFVMKIKVEDGGTPPKSSTAI-LQVTISDVNDNRPVFKDSE---VEVNVPENAPTGTSVTQLHATDADLGSNAQIHFSFSNQVSLS-TKRHFSIDSTTGLITVKQTLDREAAPVHKLIVLASDGGS----TSSRATVIVNVTDINDNVPSIDTRYIINLVNGTVLLSENAPLKTKIALITVTDKDSDLNGKVTCYTDHDIP---FRLKPVFNDQ-----------FLLETAAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPIFPQPDIQLSIPENNEPSSELIKISATDADSGHNAEILYSLAPDAPDCFNIDKRSGVLSVAKRLDRERQEKYSFTVLARDNGSTSLQSNITVKLIVQDLNDNSPAFTHPEYNFYVPENLPLSGTVGLITVTDSDAGDNAVITLSILNGKDNFVIDPQTGVIKPNITFDREQQSSYTFMVKATDGGQPPSTSYAKVTINVVDVNDNRPVFV-------IPSSNYSYDLVQSTTSP-GAVVTRVFAIDNDTGMNAELQYSIIGGSQRGLFAIDKTTGNITLQEKIVSSDQGLHRLVVKVKDLGQPESLHAIALI 768 HSP 2 Score: 162.925 bits (411), Expect = 6.344e-37 Identity = 164/598 (27.42%), Postives = 269/598 (44.98%), Query Frame = 3 Query: 807 PDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTG----AIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFI-IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLS---NVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKA-------SDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIE---PIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF----RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQE--PIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAI 2528 PD + + + I DIND+ P F +I++ I E I A D D+G N + L + +++ + ++ I G + V LDRE ++ + + V D G+PP+S++ L V I+D NDN P + E + + EN ++V + A D D G+++ I+ +N LS + +++STT + ++ LDRE + L++L D GS S+ + + V+D NDN+P + + I +V V LS LK +D D +N + + T+ D F + D + +E P+D+E ++ I I D G P T+A V + IKD ND P + S+ E+ + + +S D D+G E+ +L P + F R+ L DRE +KYS V+ RDNG L ++I + + + D+NDN P TH +F E P+ ++ I D D NA +T I K F++ P +G +K N T S+ ++K D G P S ++ I+VVD + P + I Sbjct: 116 PDEIFRLVKIRFLIEDINDNAPLFQS---TVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVKSVSE-FGLD--IIETPEGDKWPQLIVQQSLDREQKDTFVMKIKVEDGGTPPKSSTAILQVTISDVNDNRPVFKDSEVEVNVPENAPTGTSVTQLHATDADLGSNAQ-----IHFSFSNQVSLSTKRHFSIDSTTGL---------ITVKQTLDREAAPVHKLIVLASDGGS--TSSRATVIVNVTDINDNVPSID-TRYIINLVNGTVLLSENAPLKTKIALITVTDKDSDLNGKVTCY--TDHDIPFRLKPVFNDQFLLETAAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPIFPQPDIQLSIPENNEPSSELIKISATDADSGHNAEILYSLAP-DAPDCFNIDKRSGVLSVAKRLDRERQEKYSFTVLARDNGSTSLQSNITVKLIVQDLNDNSPAFTH-----------PEYNFYVPENLPLSGTVGLITVTDSDAGDNAVITLSILNG-KDNFVIDPQTGVIKPNITFDREQQSSYTFMVKATDGGQPPSTSYAKVTINVVDVNDNRPVFVI 675
BLAST of Protocadherin-11 X-linked vs. TrEMBL
Match: A0A3P8YZ99 (Protocadherin 11 OS=Esox lucius OX=8010 PE=4 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 5.028e-81 Identity = 237/796 (29.77%), Postives = 383/796 (48.12%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIIN--DENDNAPFIECP-------ENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISF--SYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELI 2483 Y++ EEQ + +GN+ DL L+ +K + L F P + + ++ +++ + ++DREKLC S +F + K CF I +++L E +V IR ++ DINDN P+FQ I I E A + Y +P A D D+ +N Y L +F + I+ K L Q+LDRE+KD +++ I+ D G P S ++ L V I D+ND++P F + V + E A G ++ + A D D+G+N+++ FS + +++ S HF I+ +TG I V LDRE L V+ SD GS S TVI+N D NDN P I+ ++ EN + + I D DS + +C + P F+L V + F L T + LD E Y++ I+ D+G P L+ S ++ I + D+NDN P F + + ++ + EN S ++K+ A+D D G NA++LY + + F I++ SG L + +D ER ++ + T+ +D GS S + V + ++D+ND P+ N V E++P V ++V D D G +++++L ++ FV + + N+ FDRE Y+ +V D GQP T+ +TI + D+NDNRP + SN + S P G + ++ D+D NA+L Y I S++ F + +GN+ L SD G RLV+KV+D G P + LI Sbjct: 28 YTVREEQPENVRIGNLRRDLDLNLDPDVKL--SSPLQFKPVYK-TGDVPLVRVEASTGEIFTTAHRIDREKLC--------SGVF----------NEKRCFYEIEVAVLP-DEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTA-INTRY-PVPSAFDPDVGINGIQHYELVKSVSEFGLDIIETPEGDKWPQLIVQQSLDREQKDTFVMKIKVEDGGTPPKSSTAI-LQVTISDVNDNRPVFKDSE---VEVNVPENAPTGTSVTQLHATDADLGSNAQIHFSFSNQVSLS-TKRHFSIDSTTGLITVKQTLDREAAPVHKLIVLASDGGS----TSSRATVIVNVTDINDNVPSIDTRYIINLVNGTVLLSENAPLKTKIALITVTDKDSDLNGKVTCYTDHDIP---FRLKPVFNDQ-----------FLLETAAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPIFPQPDIQLSIPENNEPSSELIKISATDADSGHNAEILYSLAPDAPDCFNIDKRSGVLSVAKRLDRERQEKYSFTVLARDNGSTSLQSNITVKLIVQDLNDNSPAFTHPEYNFYVPENLPLSGTVGLITVTDSDAGDNAVITLSILNGKDNFVIDPQTGVIKPNITFDREQQSSYTFMVKATDGGQPPSTSYAKVTINVVDVNDNRPVFV-------IPSSNYSYDLVQSTTSP-GAVVTRVFAIDNDTGMNAELQYSIIGGSQRGLFAIDKTTGNITLQEKIVSSDQGLHRLVVKVKDLGQPESLHAIALI 768 HSP 2 Score: 162.925 bits (411), Expect = 6.546e-37 Identity = 164/598 (27.42%), Postives = 269/598 (44.98%), Query Frame = 3 Query: 807 PDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTG----AIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFI-IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLS---NVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKA-------SDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIE---PIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF----RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQE--PIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAI 2528 PD + + + I DIND+ P F +I++ I E I A D D+G N + L + +++ + ++ I G + V LDRE ++ + + V D G+PP+S++ L V I+D NDN P + E + + EN ++V + A D D G+++ I+ +N LS + +++STT + ++ LDRE + L++L D GS S+ + + V+D NDN+P + + I +V V LS LK +D D +N + + T+ D F + D + +E P+D+E ++ I I D G P T+A V + IKD ND P + S+ E+ + + +S D D+G E+ +L P + F R+ L DRE +KYS V+ RDNG L ++I + + + D+NDN P TH +F E P+ ++ I D D NA +T I K F++ P +G +K N T S+ ++K D G P S ++ I+VVD + P + I Sbjct: 116 PDEIFRLVKIRFLIEDINDNAPLFQS---TVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVKSVSE-FGLD--IIETPEGDKWPQLIVQQSLDREQKDTFVMKIKVEDGGTPPKSSTAILQVTISDVNDNRPVFKDSEVEVNVPENAPTGTSVTQLHATDADLGSNAQ-----IHFSFSNQVSLSTKRHFSIDSTTGL---------ITVKQTLDREAAPVHKLIVLASDGGS--TSSRATVIVNVTDINDNVPSID-TRYIINLVNGTVLLSENAPLKTKIALITVTDKDSDLNGKVTCY--TDHDIPFRLKPVFNDQFLLETAAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPIFPQPDIQLSIPENNEPSSELIKISATDADSGHNAEILYSLAP-DAPDCFNIDKRSGVLSVAKRLDRERQEKYSFTVLARDNGSTSLQSNITVKLIVQDLNDNSPAFTH-----------PEYNFYVPENLPLSGTVGLITVTDSDAGDNAVITLSILNG-KDNFVIDPQTGVIKPNITFDREQQSSYTFMVKATDGGQPPSTSYAKVTINVVDVNDNRPVFVI 675
BLAST of Protocadherin-11 X-linked vs. TrEMBL
Match: A0A3Q3FN09 (Protocadherin 1a OS=Kryptolebias marmoratus OX=37003 PE=4 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 1.054e-80 Identity = 257/900 (28.56%), Postives = 419/900 (46.56%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANEL-----KIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGEL---------STVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFII--TNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRN--LNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFS---IATIYFHDDDINQNAQLTYFIHESEKPY--FILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRL----------------FSLLE-LIIHVVDGP-----SSNPDYAIITNFRIVLIVIPTLIGISFSVILLFVI----KTVQKQKAN--RLINHNTKQIYTKKENSIN 2693 Y + EEQ P +G++ D L L +LE P+ + K I+ + +DRE TL + + G C +E F + L++ Q +I R+ V DINDN P F TI + E SIP+A D+D E N Y LT D T+ +Q+A++ ++ L LDRE KD Y + I+A+D G P S +L L V + D ND+ P+F K S +SE + +G ++ + A+D+D+G N +++++L++ + + I++STG I+V LDRE S+ +V+ D G P+S+ +T+ + D+NDNAP +E ++ + G + V ++ D D G ++ +C + P F+L + +ST K+ + L TT+ LD E + Y + I+ D+G+P LS++ + + V+D NDN P F + FE+ E VL + ASD D G NA+LLY I+ +++ F I+ +G++ P+D E ++ + D+GSP TA V V + D ND P + + SV E+MP + V ++V D D G V +++ P KFV +N +L+++ FDRE Y+ + D G+P ++ + +TI + D NDN P +T K SN SF P+ + + D D NA+L Y I PY F + P SG + L + G RLV++V D G P SL+E L+ H + P + +PD + +L +L G++ V+L+ V+ +Q++ + + TK +Y K+ N Sbjct: 26 YRVQEEQPPNTLIGSLAADQGLPDSGHLYKLEVGA----PYLRVDGKTGDIF---------TTEIPIDRE-------TLRDCRSLAKGKTCYLE------FEVSVTDLIQNQSPRLIEG-RIEVQDINDNTPQFPSSVLTISVPENTIMGALF--SIPLATDRDSERNGVADYALTAGPDAATLFGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSSAL-LRVVVTDANDNAPKFEKSSYE---AEVSENSPVGHSVLQVKANDSDMGPNGEIEYTLHQAVDPVPKL--LRIDRSTGIIYVKGPLDREEISSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGVANISEDMPVGTAVALVQVSDEDEGENAVVTCVVAGDVP---FQLRPAS-DSTADNKRK----YFLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPIFSPTLFEVDFAEENQPGEKVLDVTASDADSGTNAELLYNIVADSSIKGLFEIDPNTGEVRARSPLDREHKERYEFRVTAADKGSPVHKGTATVVVKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQDMDKGENARVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVIT--------KPSNS--SFRRLSPLASPDSHVEVVEAEDQDSGPNAELVYNI-AGGNPYSLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYVNETISNVSLVEALVGHSLYTPLDRDIAGDPDSGFAAHRSNILFG--SLAGVAGVVMLILVVVFIRHRIQRETKSGYQAGKKETKDLYAPKQAPKN 869
BLAST of Protocadherin-11 X-linked vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 286.189 bits (731), Expect = 3.126e-81 Identity = 238/812 (29.31%), Postives = 380/812 (46.80%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKL--CRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEF--QEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANEL-----KIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFI---------IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFII--TNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRN--LNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFS---IATIYFHDDDINQNAQLTYFI-----HESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHV 2492 Y + EEQ P +G++ D L L +LE P+ + K I+ + +DRE L CR + K CF+ +S+ + + ++ R+ V DINDN P F P T+ + +E A + +IP A D+D E N + Y L+ + + +Q+AN+ ++ L LDRE KD Y + I A+D G P S +L L V I D ND+ P+F K S +SE + +G ++ + A+D+D+G N ++++++++ M I +STG I V LDRE S VI D G P+S++ +++ + D+NDNAP +E + I E+ + V ++ D D G ++ +C + P F+L S KK + L TT+ LD E I Y + I+ D+G+P LS++ + + V+D NDN P F FE++ E VL + A D D G NA+L+Y II ++ F I+ +SG++ P+D E ++ + D+G PS TA V + + D ND P + S + SV E+MP + V ++V+D D G +V +++ P FV +N +L+++ FDRE Y+ + D G+P ++ + +TI + D NDN P +T K SN SF P+ + + D D NA+L Y I HE F + P G +KL + G RLV+KV D G P ++ + I+V Sbjct: 27 YHVREEQPPNTLIGSLAADQGLPDSGHLYKLEVGA----PYLRVDGKTGEIF---------TTEIPIDRETLKDCRIK--------------------GKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSV-QENAHMGATF-AIPQATDRDTERNGVLKYDLSAGPEASALFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSAL-LRVVITDANDNAPQFEKSSYE---AEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKM--LQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVP---FQLRPAGDSSVDNKKK-----YFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVT--------KPSNS--SFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHE----LFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYV 775 HSP 2 Score: 136.732 bits (343), Expect = 3.188e-32 Identity = 130/499 (26.05%), Postives = 219/499 (43.89%), Query Frame = 3 Query: 1182 INDENDNAPFIECPE-NFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLS-NVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVD---HTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMN--------PSVAEHMPKGTVVQTLSVIDPDTGP--------GGEVSVALLPWENKFVFRN----LNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI--HESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAIITNFRIVLIVIPTLIGISFSVIL 2597 + D NDN P P ++EN +T +A D D+ + DL + P S S + + + + IV LDRE +Y L I D G+P +S L+ ++++D NDN P F +S++E +V EN SVL++KA+D+D+G N ++ Y I D I +++G + P+D E + +D+G ++T YV + + D ND P++ + +++E MP GT V + V D D G G+V L P + V L T L+++R I D Y + ++ D+G P L+++ L + ++D NDN P I SP + + F+ + G + + D D NA+L Y I S + F + P SG ++ S + + D G P ++I V+D ++P + + + VL +P L + +L Sbjct: 121 VQDINDNTPQFPSPVLTLSVQENAHMGATFAIPQATDRDTERNGVLKYDL-SAGPEASALFSLQMANDRGEKLPQLIVL-------GNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYER-IRD-YRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSP-----IFSPPLF----EVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVL 600 HSP 3 Score: 133.65 bits (335), Expect = 2.696e-31 Identity = 113/381 (29.66%), Postives = 182/381 (47.77%), Query Frame = 3 Query: 738 LQT---LDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKP-TNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHR-SNFEIQVVENKVNLSSVLKL-KASDNDIGINADLLYFIITNVDHT-FMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKD 1856 LQT LD E+ Y + I A+D G P +LS + +L V + D ND+ P FS L V +E+ + G+ + + A D D G N++L +S+ + DS F I+ S+G + + LDRE E V +D G P + + + + D NDN P F+ +F + EN LS VG + DMD G ++ ++++P +F + N T I SI F DRE S+Y+ + D G P S+ ++I V D+NDN P + SN + + SV+++ +A D D G NA+L+Y I H F I+ + G++ + + + + + D+G PS A VH+ + + Sbjct: 421 LQTTTPLDYERIRDYRVEIVAVDSGNP-ALSSTNSLRVQVTDTNDNSPIFSPP---LFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSI---IADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQ---LSVEPDVGNFVVQN----GTGTILSSISF----------DREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYVNE 777 HSP 4 Score: 73.1738 bits (178), Expect = 1.234e-12 Identity = 67/247 (27.13%), Postives = 114/247 (46.15%), Query Frame = 3 Query: 480 QEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVI-VSDCGSPPRSNSMALTVIINDENDNAPFIE 1217 G V I+V+ D NDN P F L +++ + E P + + +D D NA++ + F ++ I + DREK+ Y ++A+D G+P S + +T+N++D ND+ P +K S N +S A + + A D D G+N++L +S+ E F+I+ S G I + EL R+ + +H V+ VSD G P R + + +N+ N +E Sbjct: 555 HRGTATVVIKVL--DRNDNDPKFMLSSYSFSVLENMPP--LSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQ----NGTGTILSSISFDREKESSYTFRLKAVDGGEP-PRSSYVGVTINVLDENDNAPVVTKPS-NSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSI----AGGNPHELFYISPSDGEIKLTKELTRK-HGGLHRLVVKVSDRGKPSRHAIALVHIYVNETISNVSLVE 786
BLAST of Protocadherin-11 X-linked vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 286.189 bits (731), Expect = 3.319e-80 Identity = 238/812 (29.31%), Postives = 380/812 (46.80%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKL--CRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEF--QEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANEL-----KIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFI---------IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFII--TNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRN--LNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFS---IATIYFHDDDINQNAQLTYFI-----HESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHV 2492 Y + EEQ P +G++ D L L +LE P+ + K I+ + +DRE L CR + K CF+ +S+ + + ++ R+ V DINDN P F P T+ + +E A + +IP A D+D E N + Y L+ + + +Q+AN+ ++ L LDRE KD Y + I A+D G P S +L L V I D ND+ P+F K S +SE + +G ++ + A+D+D+G N ++++++++ M I +STG I V LDRE S VI D G P+S++ +++ + D+NDNAP +E + I E+ + V ++ D D G ++ +C + P F+L S KK + L TT+ LD E I Y + I+ D+G+P LS++ + + V+D NDN P F FE++ E VL + A D D G NA+L+Y II ++ F I+ +SG++ P+D E ++ + D+G PS TA V + + D ND P + S + SV E+MP + V ++V+D D G +V +++ P FV +N +L+++ FDRE Y+ + D G+P ++ + +TI + D NDN P +T K SN SF P+ + + D D NA+L Y I HE F + P G +KL + G RLV+KV D G P ++ + I+V Sbjct: 63 YHVREEQPPNTLIGSLAADQGLPDSGHLYKLEVGA----PYLRVDGKTGEIF---------TTEIPIDRETLKDCRIK--------------------GKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSV-QENAHMGATF-AIPQATDRDTERNGVLKYDLSAGPEASALFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSAL-LRVVITDANDNAPQFEKSSYE---AEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKM--LQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVP---FQLRPAGDSSVDNKKK-----YFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVT--------KPSNS--SFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHE----LFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYV 811 HSP 2 Score: 135.961 bits (341), Expect = 5.786e-32 Identity = 132/499 (26.45%), Postives = 221/499 (44.29%), Query Frame = 3 Query: 1182 INDENDNAPFIECPE-NFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLS-NVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVD---HTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPS-------LVSYSMN-PSVAEHMPKGTVVQTLSVIDPDTGP--------GGEVSVALLPWENKFVFRN----LNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI--HESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAIITNFRIVLIVIPTLIGISFSVIL 2597 + D NDN P P ++EN +T +A D D+ + DL + P S S + + + + IV LDRE +Y L I D G+P +S L+ ++++D NDN P F +S++E +V EN SVL++KA+D+D+G N ++ Y I D I +++G + P+D E + +D+G ++T YV + + D ND P+ L ++S +++E MP GT V + V D D G G+V L P + V L T L+++R I D Y + ++ D+G P L+++ L + ++D NDN P I SP + + F+ + G + + D D NA+L Y I S + F + P SG ++ S + + D G P ++I V+D ++P + + + VL +P L + +L Sbjct: 157 VQDINDNTPQFPSPVLTLSVQENAHMGATFAIPQATDRDTERNGVLKYDL-SAGPEASALFSLQMANDRGEKLPQLIVL-------GNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYER-IRD-YRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSP-----IFSPPLF----EVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVL 636 HSP 3 Score: 134.035 bits (336), Expect = 2.613e-31 Identity = 113/381 (29.66%), Postives = 182/381 (47.77%), Query Frame = 3 Query: 738 LQT---LDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKP-TNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHR-SNFEIQVVENKVNLSSVLKL-KASDNDIGINADLLYFIITNVDHT-FMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKD 1856 LQT LD E+ Y + I A+D G P +LS + +L V + D ND+ P FS L V +E+ + G+ + + A D D G N++L +S+ + DS F I+ S+G + + LDRE E V +D G P + + + + D NDN P F+ +F + EN LS VG + DMD G ++ ++++P +F + N T I SI F DRE S+Y+ + D G P S+ ++I V D+NDN P + SN + + SV+++ +A D D G NA+L+Y I H F I+ + G++ + + + + + D+G PS A VH+ + + Sbjct: 457 LQTTTPLDYERIRDYRVEIVAVDSGNP-ALSSTNSLRVQVTDTNDNSPIFSPP---LFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSI---IADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQ---LSVEPDVGNFVVQN----GTGTILSSISF----------DREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYVNE 813 HSP 4 Score: 72.7886 bits (177), Expect = 1.522e-12 Identity = 67/246 (27.24%), Postives = 111/246 (45.12%), Query Frame = 3 Query: 480 QEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIE 1217 G V I+V+ D NDN P F L +++ + E P + + +D D NA++ + F ++ I + DREK+ Y ++A+D G+P S + +T+N++D ND+ P +K S N +S A + + A D D G+N++L +S+ E F+I+ S G I + EL R+ L V VSD G P R + + +N+ N +E Sbjct: 591 HRGTATVVIKVL--DRNDNDPKFMLSSYSFSVLENMPP--LSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQ----NGTGTILSSISFDREKESSYTFRLKAVDGGEP-PRSSYVGVTINVLDENDNAPVVTKPS-NSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSI----AGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYVNETISNVSLVE 822
BLAST of Protocadherin-11 X-linked vs. Ensembl Cavefish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 273.863 bits (699), Expect = 1.375e-76 Identity = 227/804 (28.23%), Postives = 383/804 (47.64%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIIN--DENDNAPFIEC-----PEN--FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSN 2513 Y++ EEQ + +GN+ DL L+ ++K + L F P + + ++ +++ + ++DRE+LC S +F + K CF I +++L E +V IR ++ DINDN P+FQ I I E A + N +P A D D+ +N Y L +F + I+ K L Q LDRE KD +++ I+ D G P S ++ L V + D+ND++P F + V + E A +G ++ + A D D+G+N+++ FS + +++ + HF I+ STG I V LDRE L V+ SD + P TVI+N D NDN P I+ P N ++ EN + + I D D+ + +C + P F+L V + F L T + LD E Y++ I+ D+G P L+ S ++ I + D+NDN P F + ++ + EN + ++K+ A+D D G NA ++Y + + F I+ SG L + +D E+ ++ + T+ +D GS + V + ++D ND P+ N V E++P V ++V D D G V+++++ ++ F+ + + N+ FDRE Y+ +V D+G + T+ +TI + D+NDNRP + P S + F+ G + ++ D+D NA+L Y I S + F + +GN+ L + +D G RLV+KV+D G P + L+ V+ SN Sbjct: 68 YTVKEEQPENVRIGNLRTDLDLNLDPNIKL--SSALQFKPVYK-TGDVPLVRVEASTGEIFTTANRIDRERLC--------SGVF----------NEKRCFYEIEVAVLP-DEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAIN--NRYPVPSAFDPDVGINGIQHYELVKSVSEFGLDIIETPEGDKWPQLIVQQNLDRETKDTFVMKIKVEDGGNPPKSSTAI-LQVTVSDVNDNRPVFKDSE---VEVNVPENAPMGTSVTQLHATDADLGSNAQIHFSFSNQISPA-TKRHFAIDSSTGLITVKQPLDRESNPVHKLIVLASDGSATPSR----ATVIVNVTDVNDNVPSIDTRYIMNPVNGTVLLSENAPLNTKIALITVTDRDADLNGKVTCYTDHDVP---FRLKPVFNDQ-----------FLLETAAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPVFPQPEIQLSIPENNDPGTQLIKITATDADSGSNALIIYSLGPDAPDGFNIDPRSGILSVSKRLDREKQEKYSFTVIARDNGSNPLQSNVTVKLIVQDQNDNSPAFTHAEYNFYVPENLPLYGTVGLITVTDADAGDNAIVTLSIINGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDSGLIQTTSYAKVTINVVDVNDNRP----VFVIPSSNYSYDLVPFTTNP--GSVVTRVFAIDNDTGMNAELQYSIIGGSPRGLFAIDKTTGNITLQEKIANADQGLHRLVVKVKDLGQPESLHSIALVHLFVNDTVSN 818
BLAST of Protocadherin-11 X-linked vs. Ensembl Cavefish
Match: pcdh1b (protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]) HSP 1 Score: 271.166 bits (692), Expect = 8.797e-76 Identity = 230/819 (28.08%), Postives = 378/819 (46.15%), Query Frame = 3 Query: 81 WCIISIKPFATNLLDQIGINFTYSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKL--CRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGM--IIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANEL-----KIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIE-------CPENFI--IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITN--VDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRN--LNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPI---GFSIATIYFHDDDINQNAQLTYFIHESEKPY--FILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTP 2456 W ++ + ++L + TY + EEQ P +G++ D L L +LE P+ + K IY +DRE L CR +F + CF+ +S+ + +G ++ R+ + D NDN P F P + I E + SIP+A+D+D N Y+L + D + +Q+A+ ++ L LDRE++D Y + I+ ID G P S +L L + I D ND+ P+F + ++E +GQ++ + A+D+D+G N ++ +S ++ + + H I+ +TG I V +DRE + V D G +S+ +T+ + D NDNAP I E+ I + E+ + V ++ D D G ++ +C + P F+L + + +T +K + L TT+ LD E I Y + I+ D+G+P LS++ + + V+D NDN P F S +E+ E VL + A+D D G NA+LLY IIT+ F IN +G++ + +D E ++ + D+G PS TA V V + D ND P + + SV E+MP + V ++VID D G V +++ P KFV +N +L+++ FDRE Y+ + D G P ++ + +TI + D NDN P +T K SN S+ + +P+ + + D D NA+L Y I P+ F + G + L + G RLV+KV D G P Sbjct: 20 WTVLLLYSCGSSL-----ASITYQLREEQPPNTLVGSLAADQGLPDTGHLYKLE----VGGPYLRVDGKTGDIY---------TTDVPIDRETLKDCR--------NLF----------EGDPCFLEFEVSITDLMKGSGPRLIEGRIEIQDENDNTPQFPSPILELAIPENTYVG--AHYSIPVAMDKDAGSNGIADYKLNSGSDAMNLFSLQVADNTDEKVPQLIVLGNLDREQRDTYDLSIKVIDGGTPPRYSSAL-LRITITDTNDNVPKFERSHY---EGEMAENTPVGQSVLQVKANDDDLGANGQVTYSFHQPSPNVQRLLH--IDHNTGIIQVKGSVDREEVPLLKFSVQARDNGPQAKSSKAMVTITVKDRNDNAPSIRIRGFGLVAHEDGIANVSEDMPVGTPVALVEVSDKDEGENAVVTCVVAGDVP---FQLRSASASDSTSKRK-----YFLQTTTPLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPSLYEVDFAEENQPGDKVLDVVATDADSGTNAELLYSIITDSATKGLFDINPNTGEVRVMNQLDREYKERYEFHVEAADKGVPSLKGTATVVVRVLDRNDNDPKFMLNGYSFSVLENMPPLSPVGMVTVIDADKGENAHVQLSVEPENGKFVIQNGTGTILSSISFDREKESTYTFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVT--------KPSNS--SYKFLQPLTSPDTRVEKVDAEDIDTGLNAELVYSI-TGGNPHGLFRISSTDGEITLAKEFTRKHNGLHRLVVKVSDKGKP 775
BLAST of Protocadherin-11 X-linked vs. Ensembl Cavefish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 273.092 bits (697), Expect = 1.302e-75 Identity = 224/794 (28.21%), Postives = 379/794 (47.73%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIIN--DENDNAPFIEC-----PEN--FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELI 2483 Y++ EEQ + +GN+ DL L+ ++K + L F P + + ++ +++ + ++DRE+LC S +F + K CF I +++L E +V IR ++ DINDN P+FQ I I E A + N +P A D D+ +N Y L +F + I+ K L Q LDRE KD +++ I+ D G P S ++ L V + D+ND++P F + V + E A +G ++ + A D D+G+N+++ FS + +++ + HF I+ STG I V LDRE L V+ SD + P TVI+N D NDN P I+ P N ++ EN + + I D D+ + +C + P F+L V + F L T + LD E Y++ I+ D+G P L+ S ++ I + D+NDN P F + ++ + EN + ++K+ A+D D G NA ++Y + + F I+ SG L + +D E+ ++ + T+ +D GS + V + ++D ND P+ N V E++P V ++V D D G V+++++ ++ F+ + + N+ FDRE Y+ +V D+G + T+ +TI + D+NDNRP + P S + F+ G + ++ D+D NA+L Y I S + F + +GN+ L + +D G RLV+KV+D G P + L+ Sbjct: 68 YTVKEEQPENVRIGNLRTDLDLNLDPNIKL--SSALQFKPVYK-TGDVPLVRVEASTGEIFTTANRIDRERLC--------SGVF----------NEKRCFYEIEVAVLP-DEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAIN--NRYPVPSAFDPDVGINGIQHYELVKSVSEFGLDIIETPEGDKWPQLIVQQNLDRETKDTFVMKIKVEDGGNPPKSSTAI-LQVTVSDVNDNRPVFKDSE---VEVNVPENAPMGTSVTQLHATDADLGSNAQIHFSFSNQISPA-TKRHFAIDSSTGLITVKQPLDRESNPVHKLIVLASDGSATPSR----ATVIVNVTDVNDNVPSIDTRYIMNPVNGTVLLSENAPLNTKIALITVTDRDADLNGKVTCYTDHDVP---FRLKPVFNDQ-----------FLLETAAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPVFPQPEIQLSIPENNDPGTQLIKITATDADSGSNALIIYSLGPDAPDGFNIDPRSGILSVSKRLDREKQEKYSFTVIARDNGSNPLQSNVTVKLIVQDQNDNSPAFTHAEYNFYVPENLPLYGTVGLITVTDADAGDNAIVTLSIINGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDSGLIQTTSYAKVTINVVDVNDNRP----VFVIPSSNYSYDLVPFTTNP--GSVVTRVFAIDNDTGMNAELQYSIIGGSPRGLFAIDKTTGNITLQEKIANADQGLHRLVVKVKDLGQPESLHSIALV 808
BLAST of Protocadherin-11 X-linked vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010725.1 (pep scaffold:Pmarinus_7.0:GL479425:26296:30457:-1 gene:ENSPMAG00000009713.1 transcript:ENSPMAT00000010725.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 241.506 bits (615), Expect = 6.687e-67 Identity = 235/839 (28.01%), Postives = 374/839 (44.58%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKD----SANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKD------KFTI---------------KYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWN--ELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIEC--------PENFI-IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVS--DQNDNIPFFHR--------SNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFII-----TNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPS------VAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLP-----WENKF------VFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTI-SFSYQEPIGFSIA-TIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNG 2450 Y ++EE + +G +I DLR +L + FFP + S + + S +L + ++DRE LC + +S F + +++ + + ++ ++++V DIND+ P F+ P+ + I E +A +P AID D N+ YR++ F++ + + + + LDRE Y +++ D G P LSGS+ LT+ ++D ND+ P F V I+E +K+G ++ + A D D G N + +S + KLT ++ +TG + V N +LDRE L V+ D G RS S+ +TV +ND+NDNAP E P+ + I EN + V I D D G+S L F + L S ++ F L TT +LD E Y++ +L D G+P+LS KL+++++S D NDN P F + +E+ + EN + VL L A+D D G N + + + +V F +N +G L P+D E+ + +++ D GSP A V VT+ D ND P+ V S + + V E GT V T+S D D G V++ L+ W V R L +L DRE +Y + V D+G+P L+ S ++IT+SD NDN P +T SP + + + +FS P G + ++ +D D N + Y I + K F+L+ DSG L L T S D G RLV++V+D G Sbjct: 31 YEVDEE----VLVGYVIGDLRQSNLL--------CVCFFPPAPHVSPLPLHTPSLCIVNELSGELSVALRLDREALCMEEPDACRSTGFMH------------TVQVAAMAKGQGSSNLRLLDVQLLVRDINDHAPAFRAPHLNVSISESEAVG--RRVPLPRAIDPDAGTNSIQHYRISAASGDGLQLGPFSLVESDDDDDGGGVGVDGDGGMGHRALLELREQLDREAVPSYELLLWGEDGGNP-KLSGSVLLTIVVVDANDNAPVFVDPPTR--PVRITEHSKVGTSVVQLRAADPDAGPNGAIAYSFHTKLTSLATQAALHVDGTTGLVTVRNAEKLDRETMPVHRLVVVARDGGQLSRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDLGSSGTVDVRL-------EFP-TGAELASPNKVQ------FLLKTTRLLDYEEAQQYNVSVLAADRGTPKLS--KLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDREKRMRYELSVEACDGGSPQRKARAIVRVTVLDENDNAPTFVGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGDNARVALNLVREAGPDWIGGAGDTPGGVVRTLVVL-----DREDRVQYELSVRAVDSGRPALSASCRVSITVSDTNDNAPVIT----SPNTNDTWKHVRTFS---PAGMLVGVSVTANDIDAGDNGRPLYEIIGGNPKGIFLLNADSGALSLARTVSSLDEGLHRLVVRVRDRG 812 HSP 2 Score: 143.665 bits (361), Expect = 3.463e-35 Identity = 153/629 (24.32%), Postives = 268/629 (42.61%), Query Frame = 3 Query: 828 LNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKST-------------------GAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFI-IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFF--------HRSNFEIQVVENKVNLSSVLKLKASDNDIGINA--DLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNP------------SVAEHMPKGTVVQTLSVIDPDTGPGGEVSVA---LLPWENKFVFRNLNLLTN-----LEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQT---ISFSYQE--PIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPD---SGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAIITN 2537 L++ + + DIND P F LN V ISE +G+ + A D D G NS + ++ D + F + +S + + +LDRE S L + D G+P S S+ LT+++ D NDNAP F++ P + I E+ ++V ++A D D+G + + KL+++ ++ ++ + + LDRE + + LV++ D G S S +++ ++D NDN P F + + +++VEN + + V+ + SD D+G + D+ T + N+ L +D+E +Q +++ D+G+P + + +++ D+ND P MNP S+ E+ P GTVV L D D+GP G ++ L E+ +LN+ T DRE +Y + V D G P+ ++ +T+ D NDN P V +SN T F +E +G + T+ D D NA++ + P +I G ++ D + L ++ D+G P L + + I V D +N + +IT+ Sbjct: 128 LDVQLLVRDINDHAPAFRAPHLN---VSISESEAVGRRVPLPRAIDPDAGTNSIQHYRISAASGDGLQLGPFSLVESDDDDDGGGVGVDGDGGMGHRALLELREQLDREAVPSYELLLWGEDGGNPKLSGSVLLTIVVVDANDNAPVFVDPPTRPVRITEHSKVGTSVVQLRAADPDAGPNGAIAYSF-------HTKLTSLATQAALHVDGTTGL-VTVRNAEKLDRETMPVHRLVVVARDGGQLSRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDLGSSGTVDVRLEFPTGAELASP-NKVQFLLKTTRLLDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVF----MNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDREKRMRYELSVEACDGGSPQRKARAIVRVTVLDENDNAPTF--------VGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGDNARVALNLVREAGPDWIGGAGDTPGGVVRTLVVLDREDRVQYELSVRAVDSGRPALSASCRVSITVSD---TNDNAPVITS 729 HSP 3 Score: 53.1434 bits (126), Expect = 2.943e-7 Identity = 62/282 (21.99%), Postives = 114/282 (40.43%), Query Frame = 3 Query: 318 SQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIF-QLPNFTIMIKE---EQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIA-TIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVI-VSDCGS 1145 + +L L +DREK R++ ++ C+ + + ++ RV V D NDN P F + N T + + E+ S Y D D NA++ L I + L LDRE + +Y + + A+D G+P +LS S +++ + D ND+ P + + N + + G + ++ A+D D G+N + + ++ F +N +GA+ + + + E +H V+ V D G Sbjct: 563 TGQLTLATPLDREKRMRYELSVEA---------CDGGSPQRKARAIV----------------RVTVLDENDNAPTFVGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGDNARVALNLVREAGPDWIGGAGDTPGGVVRTLVVLDREDRVQYELSVRAVDSGRP-ALSASCRVSITVSDTNDNAPVITSPNTNDTWKHVRTFSPAGMLVGVSVTANDIDAGDNGRPLY----EIIGGNPKGIFLLNADSGALSLARTVS-SLDEGLHRLVVRVRDRGG 813
BLAST of Protocadherin-11 X-linked vs. Ensembl Sea Lamprey
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 227.254 bits (578), Expect = 8.362e-62 Identity = 221/798 (27.69%), Postives = 363/798 (45.49%), Query Frame = 3 Query: 144 TYSMNEEQDPPIYLGNIIHDLRL-DKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMI--IVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHK----DKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEH----FFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIE-----CPEN---FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF----RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIAT-IYFHDDDINQNAQLTYFIHESEKPYFILHPDS--GNLKLNSTCSVSDLGSFRLVIKVQDNG 2450 +Y + EE ++GN DLRL D L L T + ++ + + +K+DRE LC Q + C + + + +L Q G ++ +R+ V DINDN P F P T+ + E AP+ + P A D D E N Y L F + + AN K+ L ++LDRE++ Y + + A+D G P SGS L +N+ D ND+ P F + +N V I E + +G + + A D D G+N+++ + L + + + F +++++G + V L+RE + ++ +D G P + +TV + D NDN+P IE P N +I E + L V I D D GA+ +C + N P F+L +T + + L T LD E + Y + I D G+ LS + ++I + D NDN P F +++ V EN V ++ + A+D D+ NA+++YF+ + F ++ +G + E +D E+ + TI KDQG P A V V + D+ND P + V E++PK + V ++V D D G G V +++L +N+ +F + + +N+ FDRE Y + V D G+P ++++ + I + DINDN P + + SN T F + +I T + D+D NA+L Y I P+ + H D GN+ L + + G RLV++V D G Sbjct: 40 SYRVAEELREGAFIGNPSVDLRLADYNLEL------TYKVMLSKAEDAAPPLVRVNPRTGELFAAGRKMDREALCGGQ------------------DPGDECHVDVQVGVLPVQPGPFFKLIEVRINVEDINDNAPAFAAPVLTVSVPE-NAPAGKRFPIQP-ANDPDSEANGVRRYELLPSDPATVSAFELSVTETANGEKVPYLVVRKSLDREERQLYEMNLRAVDGGSPPH-SGSAVLRINVTDTNDNSPVFDQAEVN---VEIPENSPVGTHVVQLHASDRDAGSNAEVVYRLGTSTGGAGSGQGGKRLFRLDQNSGLVTVNGLLNREESPVYRIIILATDKGPEPVPATATVTVTVTDVNDNSPTIEIRDIVAPVNGVIYISEASHVNLP-VALITVSDPDIGANGAVTCYIYN--PEVPFQLKKLTYPNQ----------YLLETRETLDYETKNEYVVQIKAADAGATSLSRTMSVTIKLLDSNDNAPVFTEPTYKVSVPENNVIGKHLITVSATDRDMDKNAEMVYFLGPDAPTMFHMDPETGIISLTEQLDREKKANYSFTILAKDQGIPVLEGNATVIVNVLDVNDNRPRFSLAEFDFYVNENVPKHSTVGMVTVADSDEGENGRVRLSILGTDNRQLFSIDPESGMIRSNVGFDREQRHYYVLEVQATDGGEPVRSSTVKVVIHVMDINDNSPIVL-------MPPSNTTYKFVVPRTLPGTIVTEVSAVDNDAEINAELRYHI-VGGNPHNLFHIDPVIGNITLMEPLTETHHGLHRLVVRVSDIG 786 HSP 2 Score: 110.538 bits (275), Expect = 8.392e-25 Identity = 130/480 (27.08%), Postives = 213/480 (44.38%), Query Frame = 3 Query: 1182 INDENDNAPFIECPENFI-IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPT--NSFKLS---NVTLESTTY--IKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNV---------DHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSL--------VSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVAL----LPWE-NKFVFRNLNLLTNLE-FDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAI 2528 + D NDNAP P + + EN A D DS A+ +L+ P ++F+LS E Y ++KS LDRE Y + + D GSP S S ++ I V+D NDN P F ++ +++ EN + V++L ASD D G NA+++Y + T+ F ++Q SG + ++ E I I D+G TA V VT+ D+ND P++ V+ + S A H+ V ++V DPD G G V+ + +P++ K + N LL E D E ++Y + + D G L+ ++ +TI + D NDN P T P K+S IG + T+ D D+++NA++ YF+ F + P++G + L ++ I +D G P L +I++V+D + P +++ Sbjct: 143 VEDINDNAPAFAAPVLTVSVPENAPAGKRFPIQPANDPDSEANGVRRYELLPSDPATVSAFELSVTETANGEKVPYLVVRKS------------LDREERQLYEMNLRAVDGGSPPHSGSAVLRINVTDTNDNSPVFDQAEVNVEIPENSPVGTHVVQLHASDRDAGSNAEVVYRLGTSTGGAGSGQGGKRLFRLDQNSGLVTVNGLLNREESPVYRIIILATDKGPEPVPATATVTVTVTDVNDNSPTIEIRDIVAPVNGVIYISEASHV--NLPVALITVSDPDIGANGAVTCYIYNPEVPFQLKKLTYPNQYLLETRETLDYETKNEYVVQIKAADAGATSLSRTMSVTIKLLDSNDNAPVFT----EPTYKVS-----VPENNVIGKHLITVSATDRDMDKNAEMVYFLGPDAPTMFHMDPETGIISLTEQLDREKKANYSFTILAKDQGIPVLEGNATVIVNVLDVNDNRPRFSL 599
BLAST of Protocadherin-11 X-linked vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004042.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004042.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 203.371 bits (516), Expect = 2.201e-53 Identity = 191/686 (27.84%), Postives = 289/686 (42.13%), Query Frame = 3 Query: 501 TIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISV-FISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVF-----TFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFII-TNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFR--NLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISF-SYQEPIGFS--IATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLK---------LNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVV 2495 T+ V+V D NDN P F + E+ AP + + A D D LNA I YRL F++ + +I +LDRE ++ Y++ + A+D G LS S L V + D+ND PRF LN V + A G + + A D D G N L+FSL+ A F ++ G IH L + + + L V VSD G+PPRS +TV D + F P +F E++ +T+ + A +S + V+ + VF + E+S LD E Y LV+ D+G P S + + V D NDN P F S F +V EN +++ L A D D GIN + Y II N+ + F +N SG++ + +D E +T+ D+GSP+ T V +++ D ND P + V E G V +S +D D GP ++ +LL F + + +RE Y++ V D P T S +TI + D+NDN PR QT + + EP +A + D D N Q+ +F+ S+ F + DSG + S ++L + V+ D G P L S + I++V Sbjct: 11 TVTVLVEDENDNLPRFGAAELRAAVPED-APIGSDVALV-NATDADAGLNAIISYRLRGGDGHFSVN----PSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRF----LNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLS-----GSASAGFSVDPRRGVIHAARAL-QGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEFPRFAPGPRSFSFREDQPPGTTITVVAA--------------------RSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPEN-TPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQI-FSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRF------------GQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMR-SQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIV 642 HSP 2 Score: 159.844 bits (403), Expect = 8.766e-40 Identity = 156/639 (24.41%), Postives = 281/639 (43.97%), Query Frame = 3 Query: 495 IVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLT---NHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISE--QAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGF----IKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHK---------QITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF-----RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESE 2339 + T+ V D + P P + +E+Q P +I + + + Y L N D F + + E+ + + LD E + Y +++EA D G P S L L V+++DIND+ P FS S F ++ + +TI + A D D G N ++ +S+ D F +N ++G I + LDRE S L V +D GSP + ++ + + + DENDN+P F + I + E + VGF + D D G ++ + L++ P+ F + T E++ + L+RE+ S Y++ + D P + S ++I+V D NDN P F ++ + I+ E + V ++ ASD D G N + +F+ + ++ F + + SG+++ + P+ + + + + D+G P ++ A V + I N P + + VA + GT + +S +DPD G+++ +++ F L+L +L D +S+ V RD G+P L++ I++++ N PR H P ++ +S P G S+A + D D N + Y I + Sbjct: 216 VTTVTVRFRDAGEFPRFAPGPR-SFSFREDQPPG----TTITVVAARSSRRAGPVSYHLASGGNLGDVFAVD--PQSGEVSV--HRALDHEYQHHYELVVEARDSGFP-PFSAYLKLEVDVLDINDNAPEFSS------SRFWAKVPENTPPRTIVVLTAVDKDSGINGQVDYSI----IDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQ-----IFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLD--PSLPFSIHPST--------------GEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTEN-FRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRASLAGD--AGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAH----PPLE-----LSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGD 798 HSP 3 Score: 142.895 bits (359), Expect = 1.434e-34 Identity = 161/660 (24.39%), Postives = 285/660 (43.18%), Query Frame = 3 Query: 624 AIDQDIELNAKILYRLT--NHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENF-IIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVT-LESTTYI--KKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGS-PSFTT-TAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNL-----EFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQN-AQLTYFIHESE---KPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVV---DGPSSNPDYAIITNF 2540 A+D D ++N +I Y + N +F + L + +L + + + +EA D G+P LS +++ + N PRF+ L L + E G ++A + A D D G N + +S+ D + F I++++G + + ELD E + +L V +D G ++ +++ + D NDN P + + + +I EN +TV + A D DS P+N+ + ++ E+ ++ +K+ V L+T LD E TY L + + ++ + + ++ N+ P F + + V E+ + V + A+D D GI+ + Y + + F +N+ +G++ +D ER T+ + K+ GS F V+V I D ND PP S + V+E GT V +S D D+ PG L+ N ++N T L DRE Y++ V+ D G+P T + ++ + + D+NDN P L + + +P G ++ + D D+ N T+ + S+ + YF L SG LK F L + + D G+P L S + L + V+ D PS D + N+ Sbjct: 675 AVDPDRDVNGQIAYSVVGGNASRRFDV---DAGGFLHL--RASLAGDAGSIFSVTVEARDRGRP-PLSSRATAIISVTEENQYAPRFAHPPLELS---LPENHPAGSSLARVTATDTDAGVNGAIVYSIASG--DGSGL--FDISRASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADS--------------PSNAVTMYSLDDGEADLFVLNQKTGV----LTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLL-----------TSSAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLS-SSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNPSEARDVRVHVNY 1290 HSP 4 Score: 135.961 bits (341), Expect = 1.906e-32 Identity = 139/570 (24.39%), Postives = 245/570 (42.98%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI-AIDQDIELNAKILYRLTNHKDKFTIKYIQIANEL-KIAPLQTLDREKK------DKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF----RNLNLLTNLEFDREINDKYSILVILRDNGQPRL--TNSILLTITISDIND 2168 + ++V+D+NDN P F + I E PS+ + A D D N ++ + + + + F + + + E+ + PL+ D +KY ++ A+D G+P LS +T+NI+ N + PRF +E S ++ + G I + A D D N ++ +S+ A F ++ + G +H+ L + + V D G PP S+ + + +EN AP F P + EN S++ + A D D+G + + + + F +S + + ++ EL D E Y+L + D G + +SI V+D NDN P + S++ + EN + ++VL + A D D NA +Y + F++NQ +G L +D+E + +T+ + +TA VHV I +N+ P V N V+E P G V ++ D D G G V L F ++ + + DRE ++ VI ++ G R + +L+ + I+D ND Sbjct: 525 VTIVVDDVNDNAPRFGQTAYYIEFPE---PSEGEALVARVSASDADDGANGQVFFFMRSQTENFRVG--RDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRP-PLSSDATVTINIVVPNANAPRFLRERY---STPVAATVRAGTRILDMSAVDPDRDVNGQIAYSV----VGGNASRRFDVD-AGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGD--------VLLVGEL------DYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND 1066 HSP 5 Score: 134.42 bits (337), Expect = 6.116e-32 Identity = 131/468 (27.99%), Postives = 208/468 (44.44%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHK-DKFTIKYIQIANELKIAPLQT---LDREKKDKYLIIIEAIDCGKPDSLS-GSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRS---NSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSI-VFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVD---HTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVP 1871 + + V D+NDNPP+ ++ +I E APS + A+D D NA +Y L + + D F + K L T LD E K Y + + A + PD+ + + V I +N+ PRF + N + +SE A +G + ++FA D D G + + + L +S + + F +N+ TG I V ++LDRE S L VI + GS R + + + V I D ND F + + E + V + A D DS P S + SI T + S LDRE++ Y+L ++ D G P + + ++ + + D NDN PF S+ +V EN+ +VL L+A D D+ N F + D + +SG L PID E+ + + + D GSP T+T +H+++ D ND P Sbjct: 846 VSISVTDVNDNPPMLNASDYYPVIPE-NAPSGTTVLVM-DAVDADSPSNAVTMYSLDDGEADLFVLNQ-------KTGVLTTQGFLDYETKQTYELTVRAFN--YPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFV---VSESAPVGAPVGSVFATDRDAGIDGTVFYML---FGESRS-KGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSI-RGFDVDEVLVNVAITDANDPPVFSSALYHGRVSEAASVGTHVVGVSAHDFDS--------------PPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTSS--AKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNP 1278 HSP 6 Score: 133.265 bits (334), Expect = 1.250e-31 Identity = 135/554 (24.37%), Postives = 227/554 (40.97%), Query Frame = 3 Query: 801 GKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCG-SPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFR----NLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQD 2444 G+P L+G+ +TV + D ND+ PRF L + E A IG +A + A D D G N+ + + L + D HF +N STG I LDRE ES L V D G +P S+S L V + D ND+ P F+ P + + V + A D D+G + DL F LS + + V + D +L + D G+P S +++ D + P F E++ +++ + A + N+ F ++ SG++ +D E + + +D G P F+ + V + D+ND P S V E+ P T+V L+ +D D+G G+V +++ VFR + + + DRE Y + V D G P ++ + I+++D NDN PR T + + +GF + + D D NA +T+ + + P F +HP +G + ++ + D + + ++ D Sbjct: 2 GEP-RLTGTGTVTVLVEDENDNLPRFGAAELRAA---VPEDAPIGSDVALVNATDADAGLNAIISYRL--RGGDG----HFSVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNG----DL-------RFSLSGSASAGFSVDPRRGVIHAARALQGPRD-----DLTLTVRVSDGGAPPRSAVTTVTVRFRDAGE-FPRFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIV-VLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIF----------SAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLP-FSIHPSTGEITVSRRLNREDRSGYAVKVRASD 516 HSP 7 Score: 128.257 bits (321), Expect = 5.139e-30 Identity = 142/569 (24.96%), Postives = 243/569 (42.71%), Query Frame = 3 Query: 498 VTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRL--SNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFII--TNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPG-GEVSVALL----PWENKFVFRNLNLL-TNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDN 2171 T + V + N P F P + + E P+ + + A D D +N I+Y + + + + ++ + + LD E + Y + + A D G S +++++ D+ND+ P + + I E A G T+ + A D D +N+ +SL++ D F +N+ TG + LD E ++ L V + ++ + V I N+ P F++ NF++ E+ + VG + A D D+G L + F ++ T E+ +S LDRE ++ +L ++ + GS R + L+++ ++D ND P F + + +V E + V+ + A D D F+I N F IN +G + P+D E +T+ D G P T T V V ++D+ND P L++ S V E+ P G V L DPD P G + LL W F + LL T DRE ++ + V + D G P LT+++ L +++ D NDN Sbjct: 739 ATAIISVTEENQYAPRFAHPPLELSLPENH-PAGSSLARV-TATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLL--VGELDYETEKLYNLSVCAADGGWQAKTECS-GVSISVTDVNDNPPMLNASDYYPV---IPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEAD-----LFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNE--------------HTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDANDP-PVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTSSAK--VTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDN 1277 HSP 8 Score: 125.176 bits (313), Expect = 4.228e-29 Identity = 170/706 (24.08%), Postives = 273/706 (38.67%), Query Frame = 3 Query: 498 VTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDK-FTI----KYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-------FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPW-ENKFVFRNLNLLTNLEFDREIN----------DKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPI------GFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGS-FRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYA 2525 T+ V V D+ND+ P F L + AP+ ++ A D D N + + L+ F++ I A L+ +D + + D G P S +TV D + PRF+ S E G TI + A + + L D +A ++ +G + V LD E L V D G PP S + L V + D NDNAP + + PEN T+ + A D DSG + +I+ N F+++ + E+ + S LDREN+++Y L + D GSP + + I V+D+NDN P F + F V E+ VL++ D D G NA + F + + F I+ ++G++ ++ E + + D P++T + V + + D+ND P + E +V +S D D G G+V + EN V R+ + ++ R + +KYS +V D G+P L++ +TI I N N PR + Y P+ G I + D D + N Q+ Y + G L L ++ + D GS F + ++ +D G P L S II V + P +A Sbjct: 114 ATLVVAVTDVNDHTPRF-LNAPYVAYAPSSAPAGTAVFAV-TARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQ---------GPRDDLTLTVRVSDGGAP-PRSAVTTVTVRFRDAGEF-PRFAP---GPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDVFA-----VDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPR-------TIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNP--------------NSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQI-FSAHVREDAAVGFPVLRVSTLDADEGPNA-AITFSLLDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRF---------------LRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRASLA-GDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFA 756 HSP 9 Score: 116.701 bits (291), Expect = 1.682e-26 Identity = 117/475 (24.63%), Postives = 201/475 (42.32%), Query Frame = 3 Query: 1140 GSPPRSNSMALTVIINDENDNAPFIECPE-NFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNG-SPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVP---PSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWEN-KFVF----RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESE-KPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAII 2531 G P + + +TV++ DENDN P E + E+ S V + A D D+G ++ S L S S T ++ TT+ LDRE +Y L + D G +P LS+S + + V+D ND+ P F + + + ++V + A D D G N DL + + + F ++ G ++ + R +T+T+ D G+P + V V +D + P P S+S E P GT + ++ G VS L N VF ++ + + D E Y ++V RD+G P + + L + + DINDN P + S++ + + +I + D D N Q+ Y I + F ++P+SG ++ ST ++ S+ L +K D G+P ++++I V D ++P + I Sbjct: 2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDGHFSVNPS----------------TGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQGPR-DDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEFPRFAPGPRSFSFR----EDQPPGTTITVVAARSSRRA--GPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFS----------SSRFWAKVPENTPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQI 443
BLAST of Protocadherin-11 X-linked vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004043.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004043.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 203.371 bits (516), Expect = 2.458e-53 Identity = 191/686 (27.84%), Postives = 289/686 (42.13%), Query Frame = 3 Query: 501 TIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISV-FISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVF-----TFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFII-TNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFR--NLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISF-SYQEPIGFS--IATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLK---------LNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVV 2495 T+ V+V D NDN P F + E+ AP + + A D D LNA I YRL F++ + +I +LDRE ++ Y++ + A+D G LS S L V + D+ND PRF LN V + A G + + A D D G N L+FSL+ A F ++ G IH L + + + L V VSD G+PPRS +TV D + F P +F E++ +T+ + A +S + V+ + VF + E+S LD E Y LV+ D+G P S + + V D NDN P F S F +V EN +++ L A D D GIN + Y II N+ + F +N SG++ + +D E +T+ D+GSP+ T V +++ D ND P + V E G V +S +D D GP ++ +LL F + + +RE Y++ V D P T S +TI + D+NDN PR QT + + EP +A + D D N Q+ +F+ S+ F + DSG + S ++L + V+ D G P L S + I++V Sbjct: 11 TVTVLVEDENDNLPRFGAAELRAAVPED-APIGSDVALV-NATDADAGLNAIISYRLRGGDGHFSVN----PSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRF----LNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLS-----GSASAGFSVDPRRGVIHAARAL-QGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEFPRFAPGPRSFSFREDQPPGTTITVVAA--------------------RSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPEN-TPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQI-FSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRF------------GQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMR-SQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIV 642 HSP 2 Score: 159.844 bits (403), Expect = 8.971e-40 Identity = 156/639 (24.41%), Postives = 281/639 (43.97%), Query Frame = 3 Query: 495 IVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLT---NHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISE--QAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGF----IKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHK---------QITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF-----RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESE 2339 + T+ V D + P P + +E+Q P +I + + + Y L N D F + + E+ + + LD E + Y +++EA D G P S L L V+++DIND+ P FS S F ++ + +TI + A D D G N ++ +S+ D F +N ++G I + LDRE S L V +D GSP + ++ + + + DENDN+P F + I + E + VGF + D D G ++ + L++ P+ F + T E++ + L+RE+ S Y++ + D P + S ++I+V D NDN P F ++ + I+ E + V ++ ASD D G N + +F+ + ++ F + + SG+++ + P+ + + + + D+G P ++ A V + I N P + + VA + GT + +S +DPD G+++ +++ F L+L +L D +S+ V RD G+P L++ I++++ N PR H P ++ +S P G S+A + D D N + Y I + Sbjct: 216 VTTVTVRFRDAGEFPRFAPGPR-SFSFREDQPPG----TTITVVAARSSRRAGPVSYHLASGGNLGDVFAVD--PQSGEVSV--HRALDHEYQHHYELVVEARDSGFP-PFSAYLKLEVDVLDINDNAPEFSS------SRFWAKVPENTPPRTIVVLTAVDKDSGINGQVDYSI----IDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQ-----IFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLD--PSLPFSIHPST--------------GEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTEN-FRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRASLAGD--AGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAH----PPLE-----LSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGD 798 HSP 3 Score: 142.895 bits (359), Expect = 1.531e-34 Identity = 161/660 (24.39%), Postives = 285/660 (43.18%), Query Frame = 3 Query: 624 AIDQDIELNAKILYRLT--NHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENF-IIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVT-LESTTYI--KKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGS-PSFTT-TAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNL-----EFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQN-AQLTYFIHESE---KPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVV---DGPSSNPDYAIITNF 2540 A+D D ++N +I Y + N +F + L + +L + + + +EA D G+P LS +++ + N PRF+ L L + E G ++A + A D D G N + +S+ D + F I++++G + + ELD E + +L V +D G ++ +++ + D NDN P + + + +I EN +TV + A D DS P+N+ + ++ E+ ++ +K+ V L+T LD E TY L + + ++ + + ++ N+ P F + + V E+ + V + A+D D GI+ + Y + + F +N+ +G++ +D ER T+ + K+ GS F V+V I D ND PP S + V+E GT V +S D D+ PG L+ N ++N T L DRE Y++ V+ D G+P T + ++ + + D+NDN P L + + +P G ++ + D D+ N T+ + S+ + YF L SG LK F L + + D G+P L S + L + V+ D PS D + N+ Sbjct: 675 AVDPDRDVNGQIAYSVVGGNASRRFDV---DAGGFLHL--RASLAGDAGSIFSVTVEARDRGRP-PLSSRATAIISVTEENQYAPRFAHPPLELS---LPENHPAGSSLARVTATDTDAGVNGAIVYSIASG--DGSGL--FDISRASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADS--------------PSNAVTMYSLDDGEADLFVLNQKTGV----LTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLL-----------TSSAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLS-SSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNPSEARDVRVHVNY 1290 HSP 4 Score: 135.961 bits (341), Expect = 2.124e-32 Identity = 139/570 (24.39%), Postives = 245/570 (42.98%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI-AIDQDIELNAKILYRLTNHKDKFTIKYIQIANEL-KIAPLQTLDREKK------DKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF----RNLNLLTNLEFDREINDKYSILVILRDNGQPRL--TNSILLTITISDIND 2168 + ++V+D+NDN P F + I E PS+ + A D D N ++ + + + + F + + + E+ + PL+ D +KY ++ A+D G+P LS +T+NI+ N + PRF +E S ++ + G I + A D D N ++ +S+ A F ++ + G +H+ L + + V D G PP S+ + + +EN AP F P + EN S++ + A D D+G + + + + F +S + + ++ EL D E Y+L + D G + +SI V+D NDN P + S++ + EN + ++VL + A D D NA +Y + F++NQ +G L +D+E + +T+ + +TA VHV I +N+ P V N V+E P G V ++ D D G G V L F ++ + + DRE ++ VI ++ G R + +L+ + I+D ND Sbjct: 525 VTIVVDDVNDNAPRFGQTAYYIEFPE---PSEGEALVARVSASDADDGANGQVFFFMRSQTENFRVG--RDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRP-PLSSDATVTINIVVPNANAPRFLRERY---STPVAATVRAGTRILDMSAVDPDRDVNGQIAYSV----VGGNASRRFDVD-AGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGD--------VLLVGEL------DYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND 1066 HSP 5 Score: 134.035 bits (336), Expect = 6.645e-32 Identity = 131/468 (27.99%), Postives = 208/468 (44.44%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHK-DKFTIKYIQIANELKIAPLQT---LDREKKDKYLIIIEAIDCGKPDSLS-GSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRS---NSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSI-VFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVD---HTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVP 1871 + + V D+NDNPP+ ++ +I E APS + A+D D NA +Y L + + D F + K L T LD E K Y + + A + PD+ + + V I +N+ PRF + N + +SE A +G + ++FA D D G + + + L +S + + F +N+ TG I V ++LDRE S L VI + GS R + + + V I D ND F + + E + V + A D DS P S + SI T + S LDRE++ Y+L ++ D G P + + ++ + + D NDN PF S+ +V EN+ +VL L+A D D+ N F + D + +SG L PID E+ + + + D GSP T+T +H+++ D ND P Sbjct: 846 VSISVTDVNDNPPMLNASDYYPVIPE-NAPSGTTVLVM-DAVDADSPSNAVTMYSLDDGEADLFVLNQ-------KTGVLTTQGFLDYETKQTYELTVRAFN--YPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFV---VSESAPVGAPVGSVFATDRDAGIDGTVFYML---FGESRS-KGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSI-RGFDVDEVLVNVAITDANDPPVFSSALYHGRVSEAASVGTHVVGVSAHDFDS--------------PPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTSS--AKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNP 1278 HSP 6 Score: 133.265 bits (334), Expect = 1.358e-31 Identity = 135/554 (24.37%), Postives = 227/554 (40.97%), Query Frame = 3 Query: 801 GKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCG-SPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFR----NLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQD 2444 G+P L+G+ +TV + D ND+ PRF L + E A IG +A + A D D G N+ + + L + D HF +N STG I LDRE ES L V D G +P S+S L V + D ND+ P F+ P + + V + A D D+G + DL F LS + + V + D +L + D G+P S +++ D + P F E++ +++ + A + N+ F ++ SG++ +D E + + +D G P F+ + V + D+ND P S V E+ P T+V L+ +D D+G G+V +++ VFR + + + DRE Y + V D G P ++ + I+++D NDN PR T + + +GF + + D D NA +T+ + + P F +HP +G + ++ + D + + ++ D Sbjct: 2 GEP-RLTGTGTVTVLVEDENDNLPRFGAAELRAA---VPEDAPIGSDVALVNATDADAGLNAIISYRL--RGGDG----HFSVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNG----DL-------RFSLSGSASAGFSVDPRRGVIHAARALQGPRD-----DLTLTVRVSDGGAPPRSAVTTVTVRFRDAGE-FPRFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIV-VLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIF----------SAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLP-FSIHPSTGEITVSRRLNREDRSGYAVKVRASD 516 HSP 7 Score: 127.872 bits (320), Expect = 5.926e-30 Identity = 142/569 (24.96%), Postives = 243/569 (42.71%), Query Frame = 3 Query: 498 VTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRL--SNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFII--TNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPG-GEVSVALL----PWENKFVFRNLNLL-TNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDN 2171 T + V + N P F P + + E P+ + + A D D +N I+Y + + + + ++ + + LD E + Y + + A D G S +++++ D+ND+ P + + I E A G T+ + A D D +N+ +SL++ D F +N+ TG + LD E ++ L V + ++ + V I N+ P F++ NF++ E+ + VG + A D D+G L + F ++ T E+ +S LDRE ++ +L ++ + GS R + L+++ ++D ND P F + + +V E + V+ + A D D F+I N F IN +G + P+D E +T+ D G P T T V V ++D+ND P L++ S V E+ P G V L DPD P G + LL W F + LL T DRE ++ + V + D G P LT+++ L +++ D NDN Sbjct: 739 ATAIISVTEENQYAPRFAHPPLELSLPENH-PAGSSLARV-TATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLL--VGELDYETEKLYNLSVCAADGGWQAKTECS-GVSISVTDVNDNPPMLNASDYYPV---IPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEAD-----LFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNE--------------HTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDANDP-PVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTSSAK--VTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDN 1277 HSP 8 Score: 125.176 bits (313), Expect = 4.292e-29 Identity = 170/706 (24.08%), Postives = 273/706 (38.67%), Query Frame = 3 Query: 498 VTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDK-FTI----KYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-------FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPW-ENKFVFRNLNLLTNLEFDREIN----------DKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPI------GFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGS-FRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYA 2525 T+ V V D+ND+ P F L + AP+ ++ A D D N + + L+ F++ I A L+ +D + + D G P S +TV D + PRF+ S E G TI + A + + L D +A ++ +G + V LD E L V D G PP S + L V + D NDNAP + + PEN T+ + A D DSG + +I+ N F+++ + E+ + S LDREN+++Y L + D GSP + + I V+D+NDN P F + F V E+ VL++ D D G NA + F + + F I+ ++G++ ++ E + + D P++T + V + + D+ND P + E +V +S D D G G+V + EN V R+ + ++ R + +KYS +V D G+P L++ +TI I N N PR + Y P+ G I + D D + N Q+ Y + G L L ++ + D GS F + ++ +D G P L S II V + P +A Sbjct: 114 ATLVVAVTDVNDHTPRF-LNAPYVAYAPSSAPAGTAVFAV-TARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQ---------GPRDDLTLTVRVSDGGAP-PRSAVTTVTVRFRDAGEF-PRFAP---GPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDVFA-----VDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPR-------TIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNP--------------NSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQI-FSAHVREDAAVGFPVLRVSTLDADEGPNA-AITFSLLDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRF---------------LRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRASLA-GDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFA 756 HSP 9 Score: 116.701 bits (291), Expect = 1.722e-26 Identity = 117/475 (24.63%), Postives = 201/475 (42.32%), Query Frame = 3 Query: 1140 GSPPRSNSMALTVIINDENDNAPFIECPE-NFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNG-SPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVP---PSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWEN-KFVF----RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESE-KPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAII 2531 G P + + +TV++ DENDN P E + E+ S V + A D D+G ++ S L S S T ++ TT+ LDRE +Y L + D G +P LS+S + + V+D ND+ P F + + + ++V + A D D G N DL + + + F ++ G ++ + R +T+T+ D G+P + V V +D + P P S+S E P GT + ++ G VS L N VF ++ + + D E Y ++V RD+G P + + L + + DINDN P + S++ + + +I + D D N Q+ Y I + F ++P+SG ++ ST ++ S+ L +K D G+P ++++I V D ++P + I Sbjct: 2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDGHFSVNPS----------------TGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQGPR-DDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEFPRFAPGPRSFSFR----EDQPPGTTITVVAARSSRRA--GPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFS----------SSRFWAKVPENTPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQI 443
BLAST of Protocadherin-11 X-linked vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008517.1 (pep scaffold:Pmarinus_7.0:GL476786:43429:129410:1 gene:ENSPMAG00000007697.1 transcript:ENSPMAT00000008517.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 197.978 bits (502), Expect = 9.825e-52 Identity = 170/632 (26.90%), Postives = 283/632 (44.78%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYR-LTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQT----IATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIE--ENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGS---PRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHT----------FMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNLE----FDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISF--SYQEPIGFSIATIYFHDDDINQNAQLTY 2321 + + V D+NDNPP+F +P + ++E + + A D D NA + Y L+ + F + A + + LDRE++ YL+ + A D + + L+V + D ND+ PRFS+ + + + A G+T I T+ A D D G ++ ++L +A F ++ TGA++V LDRE L +D G + + L V + D NDNAP ++ ++ E E+ +++ I A D D G ++ + + P F + N +LS LDRE S Y+LV+ D RLS++ +S++++D NDN P F + ++ V + V ++A D D G N+ + Y + T+ + F +N +G++ + +D E + +T+ D+G P T+TA + VT+ D ND P ++AE P GT V LS DPD G GE+ + + FR +L L DRE Y + V RD G P +++ + +T+SD+ND SP ++S T+ + Q P I + DDD+ + Q+TY Sbjct: 1502 VEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLS--ATDADQGQNALVTYSVLSGSEGAFVVD----AASGVLRASRRLDREERASYLLTVRASDG----THATDARLSVAVRDANDNSPRFSRHAYSFD--VAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRACYVLRARATDGGG--LAATARLYVNVLDANDNAPSVQN-DSLAAEVPEDAPPGTSLLRISATDDDEGVNAELEFSISSGDPEGRFAVGN---------------DGQLSVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSPRSALAPEDSPVG-AVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPTGDFRLDPVLGTLAVARPLDRERTASYELAVRARDGGGPARSDTASVRVTLSDVNDC---------SPAFQLSPYTVHARENTQGPPVL-ILQVVARDDDLGSSGQVTY 2092 HSP 2 Score: 194.897 bits (494), Expect = 8.310e-51 Identity = 171/688 (24.85%), Postives = 313/688 (45.49%), Query Frame = 3 Query: 345 VDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMII-VTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRL--TNHKDKFTI-----KYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVF-ISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREI------YESVHLFVIVSDCGSP-PRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDH-TFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVAL---LPWENKFVF--RNLNLLTNLEFDREINDK-YSILVILRDNGQPRLTNSILL---TITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI 2327 V ++ F S +IF++ I E L ++ G+ ++ V+V+D+N++ P+F ++ + I E++ P + + S+ A D+D N ++ Y + N +KF I Y++ LDRE +++Y + + A+D G + LS S+ + V ++D+ND++P F+ S VF E+ ++G + + A D D G+N + +S + +F ++ TG I DRE S V+ +D G P P + + V + D NDN P F + + E+ L+ + + A D+D G + + F T++++ T +++ LDRE ++Y+LV+ D+G+ L+ S +++ V D+NDN P F S + +E+ ++ L ASD D G + D+ Y I+ H TF I++++G ++ +DFE + + + +D G P ++ + V ++D ND PP+ + + S+ E++P GT V T++ DPD GE+ ++ P F + + T E DRE+ + + V D P T L T+ ++D NDN PR +P + + + G + T+ D D +NA + Y + Sbjct: 696 VSGDQRGSFSIEWSGGRIFTANAIDREEQ------AFYQLRVVANSGGVAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDE-PVNSRFFSV-RATDKDSGKNGEVKYEIGEGNGGEKFGIFPDGQLYVRY----------ELDRETREEYSLTVSAMDTGV-EPLSSSVTVNVTVLDVNDNKPLFNSSSY----VFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQV------NFELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNLTQLLRVTASDVDEGVNGALRYAINEGNEGGKF-----TVDAS---------TGQITLLGSLDREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELLITLTASDEDTGPSGDVRYAIVAGNTHATFAIDRSTGSVFLARRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHVRDFNDNPPAFLPGDVFASIMENIPIGTRVITVTARDPDADVNGELHYSIARQFPPGAHFTIDPESGEICTAAEIDREVTGGLFEVTVRATDKAIPVHTRRSALKNVTVLVTDENDNAPRFV----TPTAILVD-----GLRAAAGSVVGTLQASDPDEAENAAVRYAV 1331 HSP 3 Score: 187.578 bits (475), Expect = 2.053e-48 Identity = 160/555 (28.83%), Postives = 260/555 (46.85%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSI---PIAIDQDIELNAKILYRLTNHKDK----FTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGS-PPR--SNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHT--FMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPS--LVSYSMNPSVAEHMPKGTVVQTLSVI--DPDTGPGGEVSVALLPWENKFVFR-----NLNLLTNLEFDREINDKYSILVILRD 2105 + V V D NDN P F ++ + E+ AP +++ +A D D ++ Y L +D + L + + LDRE + Y++ A D G L+ + L VN++D ND+ P +SL + + E A G ++ I A D+D G N++L+FS++ S E F + G + V LDRE +L V VSD PP S+++ +++I+ D NDNAP P + + E+ + V ++A D DSG +S L T+ + + V T E+ LDRE +Y+L +L D G P L+++ +++ V D NDN P F R +E + E++ + VL+L A D D G N +L Y I + D T F ++ G L P+D ER + + +D G P+ + TA V VT+ D+ND P+ L Y+++ A +G V L V+ D D G G+V+ A + F +++LL +L DRE ++ +++ D Sbjct: 1603 LSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVT--RPLDRESRACYVLRARATDGG---GLAATARLYVNVLDANDNAPSVQNDSL---AAEVPEDAPPGTSLLRISATDDDEGVNAELEFSIS-----SGDPEGRFAVGNDGQLSVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSPRSALAPEDSPVGAVVATVQAVDPDSGRNSYVEYALA----TDGEEGGGGAGAGPGPFALNTV-TGEVRLVRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASG-DPTGDFRLDPVLGTLAVARPLDRERTASYELAVRARDGGGPARSDTASVRVTLSDVNDCSPAFQLSPYTVH---ARENTQGPPVLILQVVARDDDLGSSGQVTYAAAGGNDGGAFSVSPDGHVHLLRSL--DREAQPQHVLIITATD 2133 HSP 4 Score: 167.162 bits (422), Expect = 4.020e-42 Identity = 172/698 (24.64%), Postives = 288/698 (41.26%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPN-FTIMIKEEQAPSDWNYQSIPIAIDQDIELNA--KILYRLTNHKDKFTI---KYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP---FIECP---ENFIIEENRGELSTVGFIKAFDMDS-GASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSP--RLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVD-HTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVAL---LPWENKFVFRNLNLLTN-----LEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYA 2525 +RV+V D+NDN P F P + KE+ A + A+D+D+ N Y++ + ++ + + + L +A LDRE Y + ++A D G P G L + V + D ND+ P F K + ++E + +G + + L + K TG + LD E L + +D G+PP S + + D NDN P F+ P + ++E+ + + D DS A+ S ++ F L + +K S LDRE I Y+L IL DNG P R + + L+ + V+D ND+ P F S + + E S V + A D D G+NA L Y I++ D F +++++G + +D E + + I +DQG+ T + VT+ D+ND PP + E+ G V ++S D D G G V +P + + +FR L+ LT DRE ++Y ++V +D G P L ++ +T+ + D+NDN P + S EP G ++ T+ D D N + Y + + F ++ +G + + + ++L + D G R S + I V D + P +A Sbjct: 9 VRVVVGDVNDNAPSFPEPGVMEVAFKEDAAVGRQVL--LDTAVDRDVGPNGVNHHAYKIVSGNEEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRY-GRLQVNVTVQDANDNPPAFEKPAYR---ASVAEDSPVGAALRDLLHR-----GRGPLAVPFDPK---------------TGMVSTRQPLDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAPGVPGLRVLK----------VASQLDRERIPMYNLTILASDNGKPVARSATASLV-VYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFR-LDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPV---------QYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAARFQVNAVTGAVSTRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFA 659 HSP 5 Score: 162.54 bits (410), Expect = 1.303e-40 Identity = 169/692 (24.42%), Postives = 295/692 (42.63%), Query Frame = 3 Query: 480 QEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRL-----TNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFIS--EQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFII-TNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVAL-LPWENKFVFRNLNLLTNLE-FDREI------NDKYSILVILRDNGQPR-LTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHES-EKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVD 2498 Q ++ V + D+ND PP+F + E P + A D D+ N + Y +++ F + + K+ L++LDRE+ ++Y ++++A D G P L + +TV + D+ND+ P F + F S E G + T+ A D D G N +++ L + F +N TGA+ LDRE L V D G + +T+ + D D P F +F++ EN + VG + A +D A N + +++ SF + +F T + +DRE + Y L ++ + G ++ +S+LV D N++ P F R+++E+ + E++ S ++A+D D G N ++ Y I N F I G LY +D E ++ ++T+ D G +++ V+VT+ D+ND P S S E G++V + D D G G V+ + P N + + +L FDRE +S V+ D G+P+ L + + + + D+NDN P+ + V S ++ + + D D N L Y I+E E F + +G + L + + S+ LV+ D+GT L + + + V+D Sbjct: 424 QPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSV--SAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLT----GKVTTLKSLDREELEEYPLVVQAQDRGSP-PLGSTAKVTVVVGDLNDNHPVFYP-----VQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLT-----AGDAARFQVNAVTGAVSTRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGSVSASTLDLNA--NVTYLIVSGDQRGSFSIE---------WSGGRIF-----TANAIDREEQAFYQLRVVANSGG---VAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGNGGEKFGIFP-DGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVNFELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNLT---------QLLRVTASDVDEGVNGALRYAINEGNEGGKFTVDASTGQITLLGSLDREETASYTLVVSATDSGTSPLAASCTVAVQVLD 1069 HSP 6 Score: 157.147 bits (396), Expect = 5.968e-39 Identity = 170/684 (24.85%), Postives = 287/684 (41.96%), Query Frame = 3 Query: 522 DINDNPPIFQ---LPNFTIMIKEEQAPSDWNYQSIPIAIDQDI-----ELNAKILYRLTNHKDKFTIKYIQIAN--ELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTN---SFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGP--------GGEVSVALLPWENKFVFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHE---SEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVD 2498 D+NDN P + LP +++ + ++ D D EL+ I+ N + F + + LK+A LDRE+ Y + I A D GKP + S + +L V + D+ND PRF+ + SE A G + + A D D G N+KL++S+ + F +++STG + ++DRE+ SV L + D G+ P++ +LTV + D ND P F + EN V + A D D G + + P F+L ++T + TT KS LDRE + Y LV+ D GSP L ++ ++++V D NDN P F+ + ++EN+ ++V + A+D D G N + Y + F +N +G + +D E + + D G + A V +T+ D D PP+ + V E++ GT+V ++S D G + + W +F T DRE Y + V+ G + +++ + D+N++ P ++ +S + EP+ ++ D D +N ++ Y I E EK F + PD G L + + L + D G L S + + + V+D Sbjct: 217 DVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVG--GNERGHFVLHAPGVPGLRVLKVA--SQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAAL---SEGAPAGSYVKDVTAMDADSGLNAKLRYSI----VSGNDLGWFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTGKVTTL--KS------------LDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAARFQVNAVTGAVSTRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGSVSASTLDLNANVTYLIVSGDQRGSFSIEWSGGRIF------TANAIDREEQAFYQLRVVANSGG---VAGEASVSVLVHDVNNHAPVFDR---------ASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGNGGEK--FGIFPD-GQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLD 854 HSP 7 Score: 144.05 bits (362), Expect = 5.246e-35 Identity = 168/683 (24.60%), Postives = 290/683 (42.46%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLT-NHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNN-SKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLY-FIITNVDHTFMINQTSGDLYQIEPIDFER------HKQITITIGCKDQGSPS-FTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFR------NLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI-HESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVD 2498 + V+V D+NDN P+F + I E + + A D D N + Y+LT +F + + A ++ +LDRE++ Y + + A+D G + S ++ +T+ + D D+ P F+++ + + VF E G + ++ A D+ N + L S +++ + F I S G I N +DRE L V+ + G + +++V+++D N++AP F I E+ S ++A D DSG + + I N + + + Y++ +EL DRE YSL + D G LS+S +++ V D NDN P F+ S++ E + S V ++A+D D G N + Y F V+ F ++ +G + + D E + ++ D G P A V V ++D+ND PP SV+E T + ++ D D G G + A+ F + LL +L DRE Y+++V D+G L S + + + D NDN PR T + S S + +G + T+ D+D + + Y I + F + +G++ L +RL + +D G P S L++HV D Sbjct: 540 VTVVVGDLNDNHPVFYPVQYFASILENE--PGGTAVTTVTATDPDRGANGTVRYQLTAGDAARFQVNAVTGAVSTRV----SLDREERAVYQLQVTALDGGHLRARSPAI-VTITVADAQDTPPTFARDDYSFV-VF--ENVAPGTLVGSVSASTLDLNANVTYLIVSGDQRGS-------FSIEWSGGRIFTANAIDREEQAFYQLRVVANSGGV---AGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYE---IGEGNGGEKFGIFPDGQLYVR------YEL------DRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVN--FELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNLTQLLRVTASDVDEGVNGALRYAINEGNEGGKFTVDASTGQITLLGSL--DREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTR---------VGELLITLTASDEDTGPSGDVRYAIVAGNTHATFAIDRSTGSVFLARRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHVRD 1174 HSP 8 Score: 141.354 bits (355), Expect = 4.506e-34 Identity = 147/543 (27.07%), Postives = 229/543 (42.17%), Query Frame = 3 Query: 498 VTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREK------KDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENF-IIEENR-GELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNV--DHTFMINQTSGDLYQIEPIDFERHKQI-TITIGCKDQGSPSFTTTAY---VHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNL-----EFDRE 2066 VT+ V V D+NDN P+F ++ EEQ + A D D N + Y + F + + +IA L+ DRE + + A D G+P L + V + D+ND+ P+F+K ++ +SE A + + A D D G N L++++NE F ++ STG I + LDRE S L V +D G+ P + S + V + DENDN P F E + +E R GEL + A D D+G S + ++ +F + T + ++ + LD E Y L + D G P S++ ++ + V D NDN P F + ++EN + V+ + A D D +N +L Y I F I+ SG++ ID E + +T+ D+ P T + V V + D ND P V+ + G+VV TL DPD V A+ + +FR L+ T + E DRE Sbjct: 846 VTVNVTVLDVNDNKPLFNSSSYVFHFCEEQ--EVGSLVGAVQATDADAGSNGGVTYSFEKPQVNFELD----SETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAK---SVYQASVSESASNLTQLLRVTASDVDEGVNGALRYAINEGNEGG----KFTVDASTGQITLLGSLDREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELLIT--LTASDEDTGPSGDVRYAIVAGNTHATFAIDRST--GSVFLARR------------LDFETQRLYRLNVSAEDGGRPPRSSATILVVHVRDFNDNPPAFLPGDVFASIMENIPIGTRVITVTARDPDADVNGELHYSIARQFPPGAHFTIDPESGEICTAAEIDREVTGGLFEVTVRATDKAIPVHTRRSALKNVTVLVTDENDNAPRFVTPTAILVDGLRAAAGSVVGTLQASDPDEAENAAVRYAVTGGDAAILFR-LDRRTGIIETSTELDRE 1358 HSP 9 Score: 135.191 bits (339), Expect = 3.396e-32 Identity = 170/684 (24.85%), Postives = 272/684 (39.77%), Query Frame = 3 Query: 498 VTIRVI-VNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNH---KDKFTIKYIQIANELKIAPLQTLDREKKDK-YLIIIEAIDCGKP--DSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSP--PRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTY------IKKSIVFTFELSTTSILDRENISTYSLVILCHDNGS-----PRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAE-HMPKG----TVVQTLSVIDPDTGPGGEVSVALLPWEN------KFVFRNLNLLTNL--EFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQE--PIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQD 2444 TI V+ V D NDNPP F LP E P ++ A D D ++N ++ Y + FTI +I +DRE + + + A D P S N+TV + D ND+ PRF + L+ +A G + T+ A D D N+ +++++ T A F +++ TG I ELDRE +V+ PR+ T+I N N P P+++ S + ++ + +S ++ +P + L T + +F+L+ + I SL+ DNG+ P +S+ + I V D NDN P F E++V EN + L A+D D G NA + Y +++ + F+++ SG L +D E +T+ D + T A + V ++D ND P ++ + VAE P G V+ T+ D D+GP GEV+ AL P E+ F + N+ DRE Y + D G L + L + + D NDN P + N +++ E P G S+ I DDD NA+L + I + + G L + + LV++V D Sbjct: 1165 ATILVVHVRDFNDNPPAF-LPGDVFASIMENIPIGTRVITV-TARDPDADVNGELHYSIARQFPPGAHFTID----PESGEICTAAEIDREVTGGLFEVTVRATDKAIPVHTRRSALKNVTVLVTDENDNAPRFVTPTAILVDGL---RAAAGSVVGTLQASDPDEAENAAVRYAV----TGGDAAILFRLDRRTGIIETSTELDRESGHGAFTLEVVAVEAKAAAPRTQRAENTIIANSMTFNHPLPRFPQDY--------ESPINLLQGQTIPMPSSYLFLRHHLDWEPEGQLVFFTLLLGVTRGHGVINPLDAPWRVSFDLTARCMF----IVFSSLLSSLRDNGAGSFIRPPMSSFNQVEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDADQGQNALVTYSVLSGSEGAFVVDAASGVLRASRRLDREERASYLLTVRASDG---THATDARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRACYVLRARATDGGG--LAATARLYVNVLDANDNAP-----------SVQNDSLAAEVPEDAPPGTSLLRISATDDDEGVNAELEFSISSGDPEGRFAVGNDGQLSVARALDRERQSFYNLVVRVSD 1807 HSP 10 Score: 90.1225 bits (222), Expect = 2.035e-18 Identity = 76/288 (26.39%), Postives = 126/288 (43.75%), Query Frame = 3 Query: 498 VTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI---AIDQDIELNAKILYRLTNHKDKFTIKYIQ---------IANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEEN-RGELSTVGFIKAFDMDSGASSNCS 1319 V + +I+ D+NDN P F P + AP D ++ A+D D N+ + Y L ++ + E+++ ++ LDRE + Y + + A+D G+P L+ + L V + D ND+ PRF + I+E G + + A D D G N +L++ + F ++ G + V LDRE S L V D G P RS++ ++ V ++D ND +P F P EN +G + + A D D G+S + Sbjct: 1820 VRVSLILTDVNDNAPAFTSPRSAL------APEDSPVGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRL--VRELDREARQSYALTVLAVDKGRP-PLTSTATLAVTVGDANDNAPRFPRREYE---AAIAEDEPPGTEVLRLSAWDPDEGANGELRY----DIASGDPTGDFRLDPVLGTLAVARPLDRERTASYELAVRARDGGGPARSDTASVRVTLSDVNDCSPAFQLSPYTVHARENTQGPPVLILQVVARDDDLGSSGQVT 2091
BLAST of Protocadherin-11 X-linked vs. Ensembl Nematostella
Match: EDO46189 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQM0]) HSP 1 Score: 230.72 bits (587), Expect = 7.516e-62 Identity = 204/686 (29.74%), Postives = 323/686 (47.08%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQT-LDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSL---NEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVI---INDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNL-----EFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYA 2525 + + + DINDN PIFQ P + + E +P Q A D D N + Y L+++ D F+I + L+T LD EKK +Y++ + A D G P S S + V + D+ND+ P+F+K +L + + E G + + A D D G N K+ +S+ NE + ++AM+ F TG I LDRE S L I +D GS R MA T + I DENDN P P F I E+ + VG + A D D G + + +I+ NSF+L +S + LS S LDRE I +Y+LV+ D GSP+ S + I + V D NDN P F +S F ++ E+ S+VL++K D D G N + + F I+ T G + P+D+E +T+ +D GSPS + TA V +TI ++ND PS VS + S+ E + T V L+ D D P ++ ++ F+ ++ + L DRE Y+++V + G + TI + D+NDN P + +PG + S PIG ++A + D D +NA++TY + + F ++P +G + D S+ L + D+G P ++ + + + D ++P ++ Sbjct: 569 VTIALQDINDNSPIFQGP-YVFRVSESSSPGHQIGQVA--ATDADDSSNGDVRYALSDNTDVFSIN-----TSTGLITLKTQLDYEKKTQYMVTVTAKDGGTP-SRSSLTVVKVMVDDVNDNPPQFAK---SLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENM--AFAMDRF-----TGEITTRVPLDRETIASYSL-TINADDGSLVRF--MAATTVNISIADENDNQPTFTGPSRFNISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLD----------PRSGI----LSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDNFTIDST-GFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAINTHVVKLNATDSDGTP---LTFDIVEGNAGSSFK-IDQSSGLISVAKRLDRETTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAP-----VFNPG----SYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKFEVNPATGLVTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFS 1204 HSP 2 Score: 212.616 bits (540), Expect = 4.149e-56 Identity = 187/687 (27.22%), Postives = 315/687 (45.85%), Query Frame = 3 Query: 465 SLLEFQEGMIIVTIRVIVNDINDNPPIFQLPN-FTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKP-DSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNLE----FDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQE--PIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVD 2498 SL+ F M T+ + + D NDN P F P+ F I E +P+ + A D+DI N + Y + + + + + L + TLDRE Y ++++A D G P S++ S++ V+++D+ND+ PRF K +L S I E A + T+ + D D G+N + SL+ + +D++ ++ STG + LD E + L V D GSP +S + + + I + NDN P F+ + I E+ + V + A D D + + D++ +SFK+ +S+ I S LDRE + Y+LV+ + GS S +I V D NDN P F+ ++ + EN +V K+ A+D D G NA + Y + F +N +G + P+D E ++ + D G PS + A + +TI D+ND P +V E+ G+ + + DPD G G V+ +++ + FR + + DRE Y++ + +D+G P ++ + IT++D NDN P + SN+T S+ E IG +A + D D NAQ+ Y I + F ++ +G L + + + ++ L I+ D G+P + S EL + V D Sbjct: 766 SLVRF---MAATTVNISIADENDNQPTFTGPSRFNI---SEDSPTGTRVGQL-TATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSV--RSTLDRETIPSYTLVVKASDAGSPQQSITASIH--VSVLDVNDNAPRFEK---SLFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDNFTID------STGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAINTHVVKLNATDSD---GTPLTFDIVEGNAGSSFKID----QSSGLI----------SVAKRLDRETTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAPVFNPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKFEVNPATGLVTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRITVVGVVDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSP----------IFASNET-SYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFAINAMNGVLTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVND 1404 HSP 3 Score: 203.371 bits (516), Expect = 3.439e-53 Identity = 193/677 (28.51%), Postives = 313/677 (46.23%), Query Frame = 3 Query: 495 IVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSI--PIAIDQDIELNAKILYRL--TNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFI--IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDH-TFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNLE-FDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESE-KPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVD 2498 + I + +ND+NDN P F +T+ + E A N +I +A D D N ++ Y + NH + F I + +I + +DRE Y + I A D G P +S + + + + D ND+ P F+ N S I E IG +A + A D D G+N+++ +S+ T ++A IN G + V E++RE + L + SD GSP ++ LTV++ND NDN P +++I + EN + ++V + A D D GA++ +I+ FK++ ST+ + + TT+ LD E S Y L + D+ +N ++I V + ND P F + N+ V EN +SV+K+ ASD D L Y I+ D F I+Q SG + + +D E I + D G+P + +V + I D ND P S S + S+ E+ + L+ D D G ++ L + + + ++T + DRE Y + + RD+G P +SI + +T+ DIND+RP LI S ++ S +P + I D D NA+LT+ + +E K F L +G++ + L I V D G P L S+ ++II V+D Sbjct: 1186 VAAITLTINDLNDNSPQFSQSKYTLTVTENTA----NGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRID----STTGRITVVGVVDREALASYNLTISAKDSGVPPWVSTAF-VAITVADENDNSPIFAS---NETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFA-----INAMNGVLTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNS-QSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKIN-----STSGV---------IMTTTPLDFEEKSQYGLEVTATDSKYTAKTN---VTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDS--FGSLSYSIVGGKDSDKFSIDQRSGIISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYNLSRNDAFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRP----LINSSSLRGS-----VRENQPKETHVMRILASDADTGLNAELTFSLLSNEHKSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVID 1816 HSP 4 Score: 202.986 bits (515), Expect = 4.754e-53 Identity = 189/649 (29.12%), Postives = 295/649 (45.45%), Query Frame = 3 Query: 492 IIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAI---DQDIELNAKILYRLTNH-KDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFI--IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWE-NKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLT--HLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSV 2402 I +I V V D+NDN P F+ F+ I+E D + S + + D+D N I L+ D FTI L P LD E Y + + A D G P S S + + + II++ND+ P F + I E I + + A D+D + L F + E A F I++S+G I V LDRE + L V ++ GS S T+ + D NDNAP P ++ + EN TV + A D D G ++ + +L ++ T+ F+++ T ++T LDRE+ ++YSL + D+G P S I++ ++D NDN P F +S + + V EN N S++L++ ASD D G N + Y II+ N + F I+ T+G + + +D E +TI KD G P + +TA+V +T+ D ND P S + + E + G+ V ++ D D G +V +++ + + F +N L E +RE Y++ + D G P +T+ LT+ ++D+NDN P IGS + T S+ T+ D D+ NA L Y I I D K+NST V Sbjct: 876 ITASIHVSVLDVNDNAPRFEKSLFSGEIRE-----DASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDNFTIDSTGFV--LSKTP---LDYETTAAYQLTVTARDGGSP-SKSATAQVKITIINVNDNVPSFVSPAQ---VTSIPEDVAINTHVVKLNATDSD---GTPLTFDIVE----GNAGSSFKIDQSSGLISVAKRLDRETTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAPVFN-PGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYEL-SVGDTSKFEVNPA--------------TGLVTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRITVVGVVDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFAINAMNGVLTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQST-----------SVLTVAADDSDVGANAVLRYSI--------ISGNDEKRFKINSTSGV 1468 HSP 5 Score: 202.216 bits (513), Expect = 8.395e-53 Identity = 185/681 (27.17%), Postives = 301/681 (44.20%), Query Frame = 3 Query: 480 QEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI-AIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFI--IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFR----NLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVD 2498 + G V I ++ D+NDN P+F +T + E+ A + + A D+D NA + Y T+ + + ++ ++LD E++ Y + + D G P L+ + +L +N+ DIND+ P FS + + E G ++ A D D N L F + + D F I+ STG I + D E L V D G P + ++ +T+ I D ND++P P N+ I E+ STV + A D+DSG LI+ +F + + + +S LDRE +YSL + D GS S+S ++I + D NDN P F + +V E+ + ++ A+D D N D+ Y + N D F IN ++G + +D+E+ Q +T+ KD G+PS ++ V V + D+ND PP +V E++ G V ++ D D+G G++S ++L F + T + DRE YS+ + D R + + I+I+D NDN+P T G IS + P G + + D DI N +TY I ++ F L P SG L + ST + S+ LV+K D G+P+ + + V+D Sbjct: 251 RSGQATVEIEIL--DVNDNRPVFSSAQYTASVDEDVA---IGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGVVTVS--RSLDFEQRSSYALGLSVTDRGSP-PLTDTSHLLINVNDINDNPPVFSPSAYQ---SRVKENTPAGTQVS---ATDRDSSTNGALVFGIIKGNDDGV----FTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVF-SPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNID--------------ANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQ-GPYVFRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDNTD-VFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEITTRVPLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFT---GPSRFNISEDS-------PTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLD 886 HSP 6 Score: 199.134 bits (505), Expect = 6.837e-52 Identity = 187/685 (27.30%), Postives = 311/685 (45.40%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI-AIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPW--ENKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI---HESEKPYFILHPDSGNLKLNSTCSVSD---LGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY 2522 +++ + ++NDN P F P I E+ A N + + A D D + + + + K Q + + +A + LDRE Y +++ A + G S N T+ ++D+ND+ P F+ S + + E IGQT+A + A D D G N+K+ + L+ T F +N +TG + LDRE S L V D G P +S A+T+ IND NDN+P F + + EN S + + A D D+GA+ + +I+ N+F++ + T ++ ++DRE +++Y+L I D+G P ++ ++I V+D+NDN P F + + E S V + A+D D G NA + Y I+ F IN +G L + I+ E T+TI D+GSP T+ + V + D+ND PP S S SV E+ + T V T++ D D G + +++ E +F + + ++T D E +Y + V D+ TN +TI + ++ND P T N T S P S+ + D D L+Y I +S+K F + SG + ST V D + + + ++V D G P L +L + I ++D ++P + Sbjct: 983 VKITIINVNDNVPSFVSPAQVTSIPEDVA---INTHVVKLNATDSD---GTPLTFDIVEGNAGSSFKIDQSSGLISVA--KRLDRETTANYTLVVRATETGS-QGESVYNNATIRVLDVNDNAPVFNPGSY---AKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDT-----SKFEVNPATGLVTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTT--------------GRITVVGVVDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFAINAMNGVLTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDSKYTAKTN---VTIRVINLNDITPAFTQ---------QNYTASVRENSPTSTSVVKVSASDRD--SFGSLSYSIVGGKDSDK--FSIDQRSG---IISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKF 1617 HSP 7 Score: 194.512 bits (493), Expect = 2.317e-50 Identity = 183/674 (27.15%), Postives = 302/674 (44.81%), Query Frame = 3 Query: 516 VNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDK--FTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSI-----LDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF----RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNST-CSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVD 2498 VNDINDNPP+F + +KE P+ A D+D N +++ + D FTI + I+ ++ D E K +Y + ++A D G P + +T+ I D+ND P FS + S I E IG T+ T+ A D D G +L++ +L F I+ ++G+I V +ELDRE S L V D GS RS+S +T+ + D NDN+P + P F + E+ +G + A D D SSN + LS+ T VF+ ST I LD E + Y + + D G+P S+ ++ ++V D NDN P F +S + V EN +V + A+D D G N + Y I++ N + F +++ +G++ P+D E ++TI D F V+++I D ND P+ S +++E P GT V L+ D D GP G V+ A++ F R+ L DRE Y+++V D G P+ + + + +++ D+NDN PR + S ++ + ++ + D D N +T + F + DS L+ T +++L + +D G+P + ++ I +++ Sbjct: 366 VNDINDNPPVFSPSAYQSRVKE-NTPAGTQVS----ATDRDSSTNGALVFGIIKGNDDGVFTID----GSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYD-TAQVTIFIEDVNDHSPVFSPSNY---SKQIPESTVIGSTVVTVTATDLDSGPRGRLEY----RLISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGPYVFRVSESSSPGHQIGQVAATDADD--SSNGDV---------RYALSDNT----------DVFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEITTRVPLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGPSRF-NISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIR---------EDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDNFTI--DSTGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITIIN 989 HSP 8 Score: 194.126 bits (492), Expect = 2.421e-50 Identity = 199/750 (26.53%), Postives = 325/750 (43.33%), Query Frame = 3 Query: 294 MIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF----RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYA 2525 M DS+ +K DRE R++ T+ L + +G +V I V D NDN P F L ++ I+E + +I A D+D NA I Y L + ++KF + + +I + LD E KD Y + I A D GK + + L + + D+ND+ P F +L++ + E +G + + A D D+G N++L +SL T +F S G I DRE S + + D GSP RS + + I D NDN P F ++E+ + + + A D D+G +++ + ++F L VT V T S LD E S+Y+L + D GSP L+++ + I V+D NDN P F S ++ +V E N + ++ A+D D N L++ II N D F I+ ++G + + D+E + +T+ +D+G P TA V + I+D+ND P + + + E G+ V T++ D D+GP G + L+ K F + ++ + E DRE YS+ V RD G ++S +TI + DINDN P + P V S G I + D D + N + Y + ++ F ++ +G + L + + + + +D GTP SL + + V D + P +A Sbjct: 11 MFTIDSSTGSITTTGRKFDRESESRYRLTV-----------------------LAQDAANRCHKGRTVVVIDV--KDENDNAPEFPLNSYVFNIRENTPAAQV---AIVTATDRDSGTNAAITYSLFSGENKFMMN----SKTGEIRTVTPLDHETKDSYTMRISAFD-GKHTTF---VPL-ITVDDVNDNAPFF---ALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDT------SYFTVDSQGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTG----------VVTVSRS----LDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKE---NTPAGTQVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSP----IFQGPYV------FRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDNTD-VFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFA 686 HSP 9 Score: 194.126 bits (492), Expect = 2.463e-50 Identity = 181/690 (26.23%), Postives = 302/690 (43.77%), Query Frame = 3 Query: 510 VIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNP---SVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNL-----EFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI-HESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAIITNFRI 2546 + V+D+NDN P F L + + E+ A Q A+D D+ +NA++ Y L + Y + ++ I DRE K Y + + A D G P S SG + + I+D+ND++P FS + + E IG + T+ A D D GNN+ L++S T+ F ++ TG + V LD E S L + V+D GSPP +++ L + +ND NDN P F ++EN + V A D DS + +I F T++ +T I +S D EN + Y L + D G P ++ ++I + D ND+ P F SN+ Q+ E+ V S+V+ + A+D D G L Y +I+ NV F I+ SG + +D E ++ + +D GS S +++ V + ++D+ND P P V+E G + ++ D D G+V AL +N VF ++N T L + D E +Y + V +D G P ++ ++ + + D+NDN P+ + T + G ++ + D D N +++Y I +E F + +G + + S+ L I D R + + I + D + P + + F I Sbjct: 156 ITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQ--LTAVDLDVGINARLSYSLVSGD----TSYFTVDSQGVIRTKGAFDRETKASYQVALRAQDGGSP-SRSGQATVEIEILDVNDNRPVFSSAQY---TASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTN----HAFTLDAVTGVVTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGTQV---SATDRDSSTNGALVFGIIKGNDDGVF-----TIDGSTGI---------ISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIF----QGPYVFRVSESSSPGHQIGQVAATDADDSSNGDVRYAL--SDNTDVF-SINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSL---------YTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEITTRVPLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGPSRFNI 798 HSP 10 Score: 192.586 bits (488), Expect = 8.554e-50 Identity = 189/689 (27.43%), Postives = 305/689 (44.27%), Query Frame = 3 Query: 495 IVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI----AIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFII-TNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIK--DMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWE-NKFVFRNLNLL--TNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYA 2525 + ++V+V+D+NDNPP F +T + E A + + A D D N KI Y + + + + E I LDRE Y + I A D G + + ++I D ND+QP F+ S ISE + G + + A D DIG N + ++ + F ++ +G + V + LDRE S L V SD GSP +S + ++ V + D NDNAP F + + I E+ STV +K D D G++ + L + N T++ST ++ LS T LD E + Y L + D GSP S + + I + + NDN+P F + E+ + V+KL A+D+D L + I+ N +F I+Q+SG + + +D E T+ + + GS + Y + TI+ D+ND P S S+ E++P G V ++ D D G +V+ L + +KF L T DRE YS+ V D+G+P + +T+TI+D+NDN P+ + S T++ + G +I + D D N ++TY I + F + +G + + L S+ L I +D+G P S + I V D ++P +A Sbjct: 668 LTVVKVMVDDVNDNPPQFAKSLYTCTVGENLA------AGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGE--ITTRVPLDRETIASYSLTINA-DDGSLVRFMAATTVNISIADENDNQPTFTGPS----RFNISEDSPTGTRVGQLTATDRDIGPNGAVTYA----IISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSL------SGEGSDNFTIDSTGFV---------LSKTP-LDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAINTHVVKLNATDSD---GTPLTFDIVEGNAGSSFKIDQSSGLISVAKRLDRETTANYTLVVRATETGSQG--ESVYNNATIRVLDVNDNAPVFNPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKFEVNPATGLVTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQ---------SKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRITVVGVVDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFA 1309 HSP 11 Score: 184.111 bits (466), Expect = 4.179e-47 Identity = 174/607 (28.67%), Postives = 286/607 (47.12%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLT-NHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSL----NEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF----RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDD 2294 + + V D NDN PIF + I E S + ++ A D+D NA++ Y + F I + +K + ++RE Y + I A D G P ++ LTV + D+ND+ P F+ +S + SV E + ++ T+ A D+D+G N+ L++S+ +EK F IN ++G I LD E L V +D ++N +T+ + + ND P F + + EN ++V + A D DS S S ++ K ++ F + ++S + +ST +LDRE +S Y++ + D G+P LSN ++I + D+NDN P F S++ ++EN S KL A+D D G NA + Y + N FMI +SG + +P+D E + I +D G+P ++ + VT+ D+ND P + S S+ SV E+ PK T V + D DTG E++ +LL E+K VF ++ T + DRE Y++ + + D G P L++ + I + D +DN PR + + ++ S P G SI + D D Sbjct: 1294 VAITVADENDNSPIFASNETSYGIDE--GVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFAINAMNGVLTVK----KEINRETVPTYTLTIRASDRGSP-MMTSDKELTVVVNDVNDNPPVFNSQSY-IGSV--RENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEK--------RFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDSKYTAKTN---VTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDSFGS--LSYSIVGGKDSDKFSID----------QRSGI----ISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYNLSRN--DAFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVMRILASDADTGLNAELTFSLLSNEHKSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRF---------QPTEYNVTISESLPRGASIVQVTARDID 1852
BLAST of Protocadherin-11 X-linked vs. Ensembl Nematostella
Match: EDO35413 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLL0]) HSP 1 Score: 224.172 bits (570), Expect = 7.906e-60 Identity = 195/677 (28.80%), Postives = 310/677 (45.79%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRL--TNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVF-ISEQAKIGQTIATIFAHDNDIGNNSKLQFSL--NEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHT-FMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEV--SVALLPWENKFVFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEP-IGFSIATIYFHDD-DINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVD 2498 + + V D+NDN P+F FT+ I E D A D D NAK+ Y +H +KF I A+ +I T DRE KD Y I + A D G P S S + + V + D ND+ P+F L VF I+E A +G +I T+ A D DIG N++L +S+ EK T F +N TG I V LDRE + + V +D G+PP S SM +TVI++D ND+ P F+ I+EN + + ++A D DSG ++ + NSF ++++ T L T LDRE ++L +L +D G PR + +++++ D NDN P F S + +V E V S+++ + A D DIG + + Y I + F+IN+ +G + +D E + T+ + D GSP+ ++ A V V + D ND P ++ V E GT V +S +D D G +V S ++ F+ + L N Y++ V R+ P + I + D ND+ P V I + + F+ Q+ G SI + D D NA + Y I + F + P++G + + S+ ++ + ++ D G P++ + + V + Sbjct: 1 VTITVQDVNDNAPVFTSDEFTVSIAENV--DDGTTVITVTATDPDAGDNAKVSYATYGGSHGNKFAID----ASSGRIYTTGTFDRETKDDYSINVTASDHGNP-SKSSTCVVLVTVADNNDNSPKFPA----LHYVFDIAEDAAVGASIGTVSASDADIGENARLTYSIVSPEKAT-------FSMNPVTGEITVGQRLDRE-GANYSIRVTATDLGTPPLSASMEITVIVDDYNDHRPVFLSHIGTVFIDENASPGTEIITLQAVDGDSGVNAEIRYAFVTGNSNNSFTINSI--------------TGRLRTARNLDRETTPRFTLEVLAYDLGVPRKDSVTNVTVVLRDVNDNQPVFTMSEYAAEVSEGVVE-SNIVTVVAEDRDIGSDGSVTYCITQGREGGLFVINENTGTIGITAKLDRETKSKYTLRVQATDGGSPALSSEADVIVNVLDQNDHAPVFTPATLTVKVQEDTGSGTTVIKVSAVDGDVGSNADVTYSTGMITLNRAIAFKPFSALPNPNI-------YNLTVRARNIYPPHYKADAAIQIEVLDTNDHAP----------VFIKSVYLLFAVQDAGSGVSIGRVEAVDKFDYGPNALVRYEAISGNGTGRFRVAPETGEVLIASSLRDDVNKTYYIRVRASDMGQPKMSDTAGVYVEVTE 626 HSP 2 Score: 165.622 bits (418), Expect = 2.066e-41 Identity = 184/727 (25.31%), Postives = 318/727 (43.74%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI--AIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGEL-STVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQI-TITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDP-DTGPGGEVSVALLPWENKFVFR----NLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAIITNFRIVLIVIPTLIGISFSVILLFVIKTVQKQKANRLINHN 2654 + V V D NDN P F ++ I E+ A SI A D DI NA++ Y + + +K T + E+ + Q LDRE + Y I + A D G P LS S+ +TV + D ND +P F ++ +VFI E A G I T+ A D D G N++++++ + F IN TG + LDRE L V+ D G P + + +TV++ D NDN P E + E + G + S + + A D D G+ + + + + F ++ E+T I T+ LDRE S Y+L + D GSP LS+ + + V DQND+ P F + ++V E+ + ++V+K+ A D D+G NAD+ Y T MI T +P + I +T+ ++ P + A + + + D ND P + + G + + +D D GP V + FR +L ++N Y I V D GQP+++++ + + +++ N + P + + N+ I+ +G ++ T+ D D +N +++Y I + + YF + +G+L ++ ++ L + D G S + I + D +NP ++ I +R L T SV++ V T + ++ + + ++ Sbjct: 106 VLVTVADNNDNSPKFPALHYVFDIAEDAAVG----ASIGTVSASDADIGENARLTYSIVS-PEKATFSMNPVTGEITVG--QRLDREGAN-YSIRVTATDLGTP-PLSASMEITVIVDDYNDHRPVFLS---HIGTVFIDENASPGTEIITLQAVDGDSGVNAEIRYAF----VTGNSNNSFTINSITGRLRTARNLDRETTPRFTLEVLAYDLGVPRKDSVTNVTVVLRDVNDNQPVFTMSE-YAAEVSEGVVESNIVTVVAEDRDIGSDGSVTYCITQGREGGLFVIN----ENTGTI----------GITAKLDRETKSKYTLRVQATDGGSPALSSEADVIVNVLDQNDHAPVFTPATLTVKVQEDTGSGTTVIKVSAVDGDVGSNADVTY-------STGMI--TLNRAIAFKPFSALPNPNIYNLTVRARNIYPPHYKADAAIQIEVLDTNDHAPVFIKSVYLLFAVQDAGSGVSIGRVEAVDKFDYGPNALVRYEAISGNGTGRFRVAPETGEVLIASSLRDDVNKTYYIRVRASDMGQPKMSDTAGVYVEVTERNLHPPVFSKAVYQ---TSENEDIA------VGSALLTVTATDRDFGRNGEISYDIIAGNSQEYFGIGLTNGSLYVSKPLDYEHQENYSLNVSATDGGKEPKTSYATVRITLRDVNDNNPVFSPI-EYRCELAENTT----PRSVVVCSVRATDRDERGQQSVRYS 778 HSP 3 Score: 164.466 bits (415), Expect = 4.256e-41 Identity = 171/702 (24.36%), Postives = 319/702 (45.44%), Query Frame = 3 Query: 459 SLSLLEFQEGM----IIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNE-KLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNS-MALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFD-MDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEH-MPKGTVVQTLSVIDPDTGPGGEVSVALL--PWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNG-QPRLTNS--ILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESE-KPYFILHPDSGNLKLNSTCSVSDLG--SFRLVIK--VQDNGTPRLFSLLELIIHVVD 2498 +L +L + G+ + + V++ D+NDN P+F + + + E S N ++ +A D+DI + + Y +T ++ ++ N I LDRE K KY + ++A D G P +LS ++ VN++D ND P F+ +L +V + E G T+ + A D D+G+N+ + +S L + A + F + I+ R IY PP + A+ + + D ND+AP FI+ ++ G ++G ++A D D G ++ + I+ T F+++ T E L +S+ D N TY + + D G P++S++ + + V+++N + P F ++ ++ E+ S++L + A+D D G N ++ Y II N F I T+G LY +P+D+E + ++ + D G T+ A V +T++D+ND P +AE+ P+ VV ++ D D V ++L ++KFV R + +EFD E+ +++ +D G P+ T + I I+ +N+ P + T + + PIG S+ + D D + + Y + S+ + F L ++G L ++ G + R++ K Q++ TP + +++ V D Sbjct: 295 TLEVLAYDLGVPRKDSVTNVTVVLRDVNDNQPVFTMSEYAAEVSEGVVES--NIVTV-VAEDRDIGSDGSVTYCITQGREGGL--FVINENTGTIGITAKLDRETKSKYTLRVQATDGGSP-ALSSEADVIVNVLDQNDHAPVFTPATL---TVKVQEDTGSGTTVIKVSAVDGDVGSNADVTYSTGMITLNRAIAFKPFSALPNPN-IYNLTVRARNIY--------------PPHYKADAAIQIEVLDTNDHAPVFIKSVYLLFAVQDAGSGVSIGRVEAVDKFDYGPNALVRYEAISGNGTGRFRVAPETGEV-------------LIASSLRDDVN-KTYYIRVRASDMGQPKMSDTAGVYVEVTERNLHPPVFSKAVYQTSENEDIAVGSALLTVTATDRDFGRNGEISYDIIAGNSQEYFGIGLTNGSLYVSKPLDYEHQENYSLNVSATDGGKEPKTSYATVRITLRDVNDNNPVFSPIEYRCELAENTTPRSVVVCSVRATDRDERGQQSVRYSILGGSGKDKFVIDERTGEIRATVEFDFEVTMSSFLMIAAKDEGLSPQRTADPPASVHILITGVNEFLPVFVQSV---------FTATVAENAPIGHSVLRVSATDKDKGPDGVVLYHLLGSDNQQGFDLDSNTGTLSVSGDLDNERAGIVTLRVIAKNLFQNSVTPSSVAHATIVVTVTD 949 HSP 4 Score: 157.918 bits (398), Expect = 4.630e-39 Identity = 181/684 (26.46%), Postives = 301/684 (44.01%), Query Frame = 3 Query: 498 VTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQ-DIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIE--ENRGELSTV-GFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNG-SPRLSNSKLIS--ILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFII-TNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKD--QGS--PSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGG-EVSVALLPWENKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQN-AQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLEL-IIHVVD 2498 I++ V D ND+ P+F + + ++ + A S + + A+D+ D NA + Y + + E+ IA +L + Y I + A D G+P +S + + V + + N P FSK + +E +G + T+ A D D G N ++ + + + E+F I + G+++V LD E E+ L V +D G P+++ + + + D NDN P P + E EN S V ++A D D + ++ + F V E T I+ ++ F FE++ +S L +I D G SP+ + S IL++ N+ +P F +S F V EN SVL++ A+D D G + +LY ++ ++ F ++ +G L +D ER +T+ + K+ Q S PS A + VT+ D ND PP + + V E G VV ++ +D D+ ++ N FV + + T E DRE +Y + V DNG P +T + L +T+ DINDN P LT L P + + +P G + T+ D D+N N Y I S+ F L+ SG + + ++ + IKV D R S + +IHV D Sbjct: 512 AAIQIEVLDTNDHAPVF-IKSVYLLFAVQDAGSGVSIGRVE-AVDKFDYGPNALVRYEAISGNGTGRFRVAPETGEVLIA--SSLRDDVNKTYYIRVRASDMGQP-KMSDTAGVYVEVTERNLHPPVFSKA---VYQTSENEDIAVGSALLTVTATDRDFGRNGEISY----DIIAGNSQEYFGIGLTNGSLYVSKPLDYEHQENYSLNVSATDGGKEPKTSYATVRITLRDVNDNNPVFS-PIEYRCELAENTTPRSVVVCSVRATDRDERGQQSVRYSILGGSGKDKF----VIDERTGEIRATVEFDFEVTMSSFL----------MIAAKDEGLSPQRTADPPASVHILITGVNEFLPVFVQSVFTATVAENAPIGHSVLRVSATDKDKGPDGVVLYHLLGSDNQQGFDLDSNTGTLSVSGDLDNERAGIVTLRVIAKNLFQNSVTPSSVAHATIVVTVTDAND-PPRFLKSVYSAHVTEGSRIGHVVTNVTAVDDDSDIRSIRYGISAGNTGNAFVMDAVTGFVRTAAELDREAIAEYRLTVTATDNGTPPMTGNATLVVTLDDINDNPPHLTPL---PCIG------RVTENKPQGTQVMTLNAEDPDLNPNRGPFKYSISGSDYGSFRLNVSSGVVSTVKSLDREKQDAYNISIKVTD---ARGLSAVNFCMIHVED 1155 HSP 5 Score: 110.538 bits (275), Expect = 2.179e-24 Identity = 143/600 (23.83%), Postives = 240/600 (40.00%), Query Frame = 3 Query: 435 NKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRL--TNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGK-PDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNS---MALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILC----HDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNL-----EFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLT 2186 NK ++ + S + + + V V + N +PP+F + E+ A A D+D N +I Y + N ++ F I L ++ + LD E ++ Y + + A D GK P + ++ +T+ D+ND+ P FS + + ++ A D D + Q S+ + + F I++ TG I E D E+ S L + D G P+ + ++ ++I N+ P F++ + EN +V + A D D G L+ F L + T LS + LD E +L ++ ++ +P I + V+D ND P F +S + V E V + A D+D I + N + F+++ +G + +D E + +T+ D G+P T A + VT+ D+ND PP L V E+ P+GT V TL+ DPD P + + FR LN+ + + DRE D Y+I + + D N I + D NDNRP+ T Sbjct: 597 NKTYYIRVRASDMGQPKMSDTAGVYVEVTERNLHPPVFSKAVYQTSENEDIAVGSALLTVT--ATDRDFGRNGEISYDIIAGNSQEYFGIGLTN--GSLYVS--KPLDYEHQENYSLNVSATDGGKEPKTSYATVRITLR--DVNDNNPVFSP--IEYRCELAENTTPRSVVVCSVRATDRD----ERGQQSVRYSILGGSGKDKFVIDERTGEIRATVEFDFEVTMSSFLMIAAKDEGLSPQRTADPPASVHILITGVNEFLPVFVQSVFTATVAENAPIGHSVLRVSATDKDKGPDGVVLYHLLGSDNQQGFDLDS--------------NTGTLSVSGDLDNERAGIVTLRVIAKNLFQNSVTPSSVAHATIVVTVTDAND-PPRFLKSVYSAHVTEGSRIGHVVTNVTAVDDDSDIRSIRYGISAGNTGNAFVMDAVTGFVRTAAELDREAIAEYRLTVTATDNGTPPMTGNATLVVTLDDINDNPPHLTPLPCIGRVTENKPQGTQVMTLNAEDPDLNPNRGPFKYSISGSDYGSFR-LNVSSGVVSTVKSLDREKQDAYNISIKVTDARGLSAVN--FCMIHVEDQNDNRPKAT 1164 HSP 6 Score: 105.916 bits (263), Expect = 4.838e-23 Identity = 133/535 (24.86%), Postives = 230/535 (42.99%), Query Frame = 3 Query: 498 VTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRL--TNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNII--DINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIV----SDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDH-TFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALL--PWENKFVFRNLNL-LTNLEFDRE 2066 T+R+ + D+NDN P+F + + E P S+ A D+D + Y + + KDKF I + E++ A ++ D E ++I A D G + +V+I+ +N+ P F + ++ + ++E A IG ++ + A D D G + + + L S + F ++ +TG + V +LD E V L VI + +P + V + D ND F++ + + E V + A D DS D+ +I+ + +S + + F + T + LDRE I+ Y L + DNG+P ++ + + + + D NDN P +V ENK + V+ L A D D+ N + I+ D+ +F +N +SG + ++ +D E+ I+I D S +HV +D ND P S + E G VV + DPD ++ ALL P N F F N L++L + ++ Sbjct: 723 ATVRITLRDVNDNNPVFSPIEYRCELAENTTPRSVVVCSVR-ATDRDERGQQSVRYSILGGSGKDKFVID--ERTGEIR-ATVE-FDFEVTMSSFLMIAAKDEGLSPQRTADPPASVHILITGVNEFLPVFVQ---SVFTATVAENAPIGHSVLRVSATDKDKGPDGVVLY----HLLGSDNQQGFDLDSNTGTLSVSGDLDNERAGIVTLRVIAKNLFQNSVTPSSVAHATIVVTVTDANDPPRFLKSVYSAHVTEGSRIGHVVTNVTAVDDDS--------DIRSIR----YGISAGNTGNAFVMDAVTGF---VRTAAELDREAIAEYRLTVTATDNGTPPMTGNATLVVTLDDINDNPPHLTPLPCIGRVTENKPQGTQVMTLNAEDPDLNPNRGPFKYSISGSDYGSFRLNVSSGVVSTVKSLDREKQDAYNISIKVTDARGLSAVNFCMIHV--EDQNDNRPKATSRDVYVHTFEGKFLGGVVADVRPDDPDIDD--LMTCALLNPPQNNIFSFPRGNCELSSLAYSQD 1226
BLAST of Protocadherin-11 X-linked vs. Ensembl Nematostella
Match: EDO40470 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S751]) HSP 1 Score: 211.846 bits (538), Expect = 9.410e-56 Identity = 197/710 (27.75%), Postives = 319/710 (44.93%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI-AIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIV--FTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENK---FVFRNLNLLTNLE-FDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAIITNFRIVLIVIP--TLIGISFSVILLF 2603 + + V D NDN P F +++ I E D + + A D+DI NA+I Y + H D I I + + ++ LD E K YLI+++A D G LS S + + ++D+ND+ P S ++E A IG +A + D D G N ++ +L D Y F + I V LDRE ++ L + D G PPR+ + + + D ND AP F + EN + V + A D D G++S + N T ES +Y+ + + ++T + LDRE I L +L HD GSP LS++ + + ++D NDN P+F++S++ + EN + S V++L A D DIG N+ +LY I+T + F ++ G + +D E T + D G S T VHV++ D+ND P S + E+ G + L ID D+ P ++ ++ N F L+T + DRE D Y + V D G N ++ IT+ D+ND P + + ++ +Q +S I ++ D NA++ Y I + +L +G L L S + S L ++ +D GTP LF + I V+D ++P + N +L+ +P T IG +F + +F Sbjct: 158 LSITVEDTNDNKPEFSNVSYSGTIPENI---DVGTSILQVSASDKDIGTNAEIQYSIETHSDPQAIFGIHPTTGVIVNNVR-LDYEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVIHVSYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTLEGG--DGYFSMKFDVLNDESIIAVGQSLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWENATVNTLVAIVNAVDQDFGSNSELVYTIAN------------TTESRSYLHWFAIDPSSGMITTATDLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGENSLILYSILT-PNTPFFLDPRKGLVTNSRTLDHEVQSSYTFQVAATDGGGRSCNAT--VHVSLTDLNDNQPVFDPSSYSVEYFENTRIGQSICQLKAIDRDS-PKFAITRFIIEQGNADEVFSVDGSGLITLAKLLDRETQDNYLLTVKAVDGGGQDSVNKAIVNITVLDVNDEPPIFSKAEYNFTIQEHSQALSV---------IGHVHAISRDKGTNAEVVYSISKGNTDNIVLINSTGTLYLQSEVDHEKIPSLYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQF----NSSSILVRLPEDTPIGHTFYTVSVF 832 HSP 2 Score: 185.267 bits (469), Expect = 1.797e-47 Identity = 200/691 (28.94%), Postives = 309/691 (44.72%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDI-GNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVI-INDENDNAP-------FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNS-KLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHT-FMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFT------TTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALL-PWENKFVFRNLNLLTNL-----EFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTH--LIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHES-EKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVD 2498 ++VIV+D+NDN P FQ ++ +KE + + Y A D D N + YR D ++I KI Q LDRE K Y+ I A D G + + +TV + D+ND P+FSK N SV ++E +G ++ T+ A D+D G NS + + + + F +N+ TG + + + LDRE+ L V+ SD G ++ I + D NDN P F PE I S V + A D D G + ++N +FK++ E+T I ST LD E + Y L + D G + S +L++I V D NDN P F ++ + EN ++V +KA D+D G+N+ + Y I + F IN +G + PID E + ++ + DQ +FT TA + + I+D+ND P VS ++ V E P V +++ +DPDTG GG V ++ P KF +L+L T + D E +Y++ + D G P LT+ L + + D+NDN P T IG + S +P G S+ + +D D NA+LTY I E F + SG + NS ++ L + P S + I+V+D Sbjct: 1002 VKVIVDDVNDNNPHFQQASYAFFVKENEPVA--TYLGAVSASDSDEGSNGHVTYRF----DTQVAQFIVDKQTGKITTSQVLDREAKASYVFSIVATDGGSSPRVDKT-QVTVIVRDVNDCSPKFSK---NKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMI------VAGPKAFSLNQVTGVLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIG------SVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFKIN----ETTGVI----------STLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPIITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSPRAHFKINSETGLIQTTHPIDREEISEYSLKVRATDQ---AFTEQDRLYNTATLKIIIQDLNDNAPKFVSRNLT-YVMEDEPFNFQVTSITALDPDTGQGGNVEYRIVSPDTGKF---SLDLKTGVLKLIGSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIG-----------TVSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGVEMDKFSIDKHSGLIVTNSILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMD 1638 HSP 3 Score: 184.496 bits (467), Expect = 3.265e-47 Identity = 179/647 (27.67%), Postives = 292/647 (45.13%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI-----AIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQT-LDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELD-REIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPD-TGPGGEVSVALLPWENKFVFRNLNLLTNL--EFDREINDKYSILVILRDNGQPRLTNSI-LLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQE--PIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSV 2402 + + V D+ND PPIF + I+E Q++ + AI +D NA+++Y ++ K I + N LQ+ +D EK + ++A D G P L G N+T+ +IDIND+ P+F+ S I V + E IG T T+ D D G ++ FSL L++ + F ++ +TGA+ + +D S L V D GSPPRS++ L + + D ND +P F + E S + + A D+DSG + S + T+ F L N +IK S LDRE+I Y+L ++ D+G+PR S+S + ++V D NDN P F ++++ V EN+ + + + ASD+D G N + Y T V F++++ +G + + +D E +I D GS V V ++D+ND P + +V E +P G+ + TL D D GP +++ ++ F + + L DRE+ ++ + V+ D G + +I + I + D+NDN P N+T + E PIG +A + D D N ++ Y I G K+N T V Sbjct: 689 VNITVLDVNDEPPIFSKAEYNFTIQEHS-------QALSVIGHVHAISRDKGTNAEVVYSIS----KGNTDNIVLINSTGTLYLQSEVDHEKIPSLYLTVQAKDKGTP-PLFGYANVTIAVIDINDNSPQFNSSS---ILVRLPEDTPIGHTFYTVSVFDADSGVLGRVSFSL---LSNPGTL--FNLDSNTGALSLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRISYAFDSKVDTSKFGLRN---GGKIFIK------------SKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKENEPVATYLGAVSASDSDEGSNGHVTYRFDTQVAQ-FIVDKQTGKITTSQVLDREAKASYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVAGPKAFSLNQVTGVLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFI-----------NETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNT--------DGTFKINETTGV 1280 HSP 4 Score: 181.415 bits (459), Expect = 2.717e-46 Identity = 178/613 (29.04%), Postives = 278/613 (45.35%), Query Frame = 3 Query: 399 FSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQ--------IANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVI-INDENDNAPFIECP----ENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVD-----HTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALL-PWENKFVFRNLNLLTNLE-FDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRP 2177 +++G I ++ +L+++EF T+ V V D+NDN P F ++ E +D +++ IA+D D N+ Y + + K I A+ + A +DRE+ D Y++ I A D G P + G L L++ + D ND++P FS S S I E +G +I + A D DIG N+++Q+S+ E +D A+ F I+ +TG I LD E S + V D GS + +S A+ I + D NDN P I ++ + EN + V + D DSG + + L S K + ES + +S LDRE + L +C D G P + K I V D ND P F R +E +V EN + V + A D D G N++L+Y I + H F I+ +SG + +D E+ Q+ +T+ D+GSP + V V + D ND P S N S+ E+ P G+ V L DPD G + ++L P F+ L+TN D E+ Y+ V D G R N+ + ++++D+NDN+P Sbjct: 9 YNAGVITTKTVLDREKVSAYNLTIVEFSTPPKSYTVLVYVQDLNDNSPSFVRGTSAKLVVFE---NDKDFRQKLIAVDSDFGSNSTQSYTIVSGNVGNVFKLISKRDTDGDLYADLVVNASSIGVDRERLDSYVLNISASDGGNP-ANHGFLRLSITVEDTNDNKPEFSNVSY---SGTIPENIDVGTSILQVSASDKDIGTNAEIQYSI-ETHSDPQAI--FGIHPTTGVIVNNVRLDYEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVIHVSYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTLEGGDGYFSMKFDVLNDESIIAVGQS------------LDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWENATVNTLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGENSLILYSILTPNTPFFLDPRKGLVTNSRTLDHEVQSSYTFQVAATDGGG-RSCNAT-VHVSLTDLNDNQP 597 HSP 5 Score: 180.259 bits (456), Expect = 6.968e-46 Identity = 191/750 (25.47%), Postives = 334/750 (44.53%), Query Frame = 3 Query: 498 VTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIP--IAIDQDIELNA--KILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-------FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKL-SNVTLESTTYIKKSIVFTFELSTTSILDRENIS-TYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDD-INQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELI-IHVVDGPSSNPDYAIITNFRIVLIVIPTLIGISFSVILLFVIKTVQKQKAN---RLINHNTKQIYTKKENS 2687 T+ V + D+NDN P+F ++++ E QSI AID+D A + + N + F++ + K+ LDRE +D YL+ ++A+D G DS++ ++ + + ++D+ND P FSK N I E ++ I + A D G N+++ +S+++ TD+ + IN STG +++ +E+D E S++L V D G+PP +T+ + D NDN+P + PE+ I T + FD DSG S L++ P F L SN T LS T ++D N + +Y+L + D GSP S++ ++ + V D ND P F ++ V+E S+++++ A+D D G N + Y + VD + + G ++ +D E ++ + + D G+P +++A V V + D+ND P S V E+ P T + +S D D G G V+ +F+ + + T+ DRE Y ++ D G + +T+ + D+ND P+ + + +++ + P+G S+ T+ DDD N+ +TY I K F L+ +G L L S L + D G + + I I+V+D + P + T F+ V P + I V + + + Q +++N NT + E + Sbjct: 583 ATVHVSLTDLNDNQPVFDPSSYSVEYFENTRIG----QSICQLKAIDRDSPKFAITRFIIEQGNADEVFSVDGSGLITLAKL-----LDRETQDNYLLTVKAVDGGGQDSVNKAI-VNITVLDVNDEPPIFSKAEYNFT---IQEHSQALSVIGHVHAISRDKGTNAEVVYSISKGNTDNIVL----IN-STGTLYLQSEVDHEKIPSLYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQFNSSSILVRLPEDTPIGH------TFYTVSVFDADSGVLGRVSFSLLS-NPGTLFNLDSN---------------TGALSLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRISYAFDSKVDTSKFGLRNGGKIFIKSKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKENEPVATYLGAVSASDSDEGSNGHVTYRFDTQVAQFIVDKQTGKITTSQVLDREAKASYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSK---------NKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVAGPKA-FSLNQVTGVLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTV----PEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFKINETT 1278 HSP 6 Score: 172.555 bits (436), Expect = 1.707e-43 Identity = 184/690 (26.67%), Postives = 312/690 (45.22%), Query Frame = 3 Query: 501 TIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFT-IKYIQI-ANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIE--ENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFE----LSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTN-LEFDREIN-----DKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY 2522 + R+ V D+ND P F + + E + +I A+DQD N++++Y + N + + + + I + I LDRE+ + ++ + D G P LS + ++ VN+ D ND+ P F++ S N S+F E + G + + A D DIG NS + +S+ LT + FF++ G + LD E+ S V +D G RS + + V + D NDN P + P ++ +E EN ++ +KA D DS F ++ +E + VF+ + ++ +LDRE Y L + D G N +++I V D ND P F ++ + + E+ LS + + A D G NA+++Y I N D+ +IN T G LY +D E+ + +T+ KD+G+P A V + + D+ND P S S+ + E P G T+SV D D+G G VS +LL N NL+ T L + I+ Y++ V +D G P +++ +L + + D+ND P + + T P +I + D D +N +++Y F + + F L + G + + S D+ + L + D+GTPR S ++ + V D +NP + Sbjct: 374 SFRINVGDVNDCAPKFDRHTYETRVWENATVN--TLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQIPQVVLTVLVHDRGSP-PLSDNCSVIVNLTDSNDNDPYFNQSSYNA-SLF--ENSPSGSPVVQLLAQDPDIGENSLILYSI---LTPNTP---FFLDPRKGLVTNSRTLDHEVQSSYTFQVAATDGGG--RSCNATVHVSLTDLNDNQPVFD-PSSYSVEYFENTRIGQSICQLKAIDRDSP----------------KFAITRFIIEQGNADE---VFSVDGSGLITLAKLLDRETQDNYLLTVKAVDGGGQDSVNKAIVNITVLDVNDEPPIFSKAEYNFTIQEHSQALSVIGHVHAISRDKGTNAEVVYSISKGNTDNIVLINST-GTLYLQSEVDHEKIPSLYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQFNSSSILVRLPEDTPIGHTFYTVSVFDADSGVLGRVSFSLL--SNPGTLFNLDSNTGALSLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTAMLELKVVDVNDYSPVFGNW---------SYTAHVLETTPPDSNIIEVVATDVDSGENGRISYAFDSKVDTSKFGLR-NGGKIFIKSKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHF 1016 HSP 7 Score: 158.303 bits (399), Expect = 4.241e-39 Identity = 177/694 (25.50%), Postives = 309/694 (44.52%), Query Frame = 3 Query: 498 VTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI-AIDQDIELNAKILYRLTN-HKDKFTIKYIQIANELKIAPLQ---TLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDT--GPGGEVSVALLPWENK---FVFRN--LNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQT---ISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPY-FILHPDSGNLKLNSTCSV--SDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY 2522 T+++I+ D+NDN P F N T ++++E +N+Q I A+D D + YR+ + KF++ +LK L+ +LD E +Y + I A D G P S L V ++D+ND+ P F+++ L +SE G ++ + A+D D G+N++L +S+ + M+ F I+K +G I + LDRE ++ L V + P R +S ++ + + D NDN P FI + EN + + D+D G ++ +++ +F + T ELSTT+ LDRE ++Y L + D P + I+I + DQNDN P F +S + + E +S+L L ASD D G N +++Y + + + I+ +G +Y + ++ KDQG V + I+D N+ P + + +V ++ D DT G+V+ L +N FV + ++ T+ F ++++ +I D+G P L ++ I I +I D+ PR NQT +S +G I T+ + +AQ+TY I K F + P +G + + S ++ +FRL + G L + L I+V+D ++P + Sbjct: 1422 ATLKIIIQDLNDNAPKFVSRNLTYVMEDEP----FNFQVTSITALDPDTGQGGNVEYRIVSPDTGKFSL-------DLKTGVLKLIGSLDYEDVPQYTLHISATDLGSPPLTSYQL-FNVVVVDVNDNPPEFTRD---LFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGV----EMDKFSIDKHSGLIVTNSILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISPVVTLKVPEN-SPARLIYTLTVQDLDYGNNTKVLYSIMSGNTDGAFTIGRST--------------GELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLSNDTYGVYSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQGQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVTMVTATDADTDKSTNGKVTYRLDDSKNSTSLFVVESNTGSVRTSAGFSNPPQGRHALYIIAEDHGSPPLRGYGIVQIVIGNIQDDPPRFL-----------NQTPARVSIPENSKVGSYITTVRAR---ASSDAQVTYSIISGNKGRAFYVDPFTGVISVASADALDYESTKNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAF 2067 HSP 8 Score: 157.147 bits (396), Expect = 1.125e-38 Identity = 169/701 (24.11%), Postives = 298/701 (42.51%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIF--QLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSL---NEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDS--------GASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKS--IVFTFELSTTSILDRENI------STYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF---RNLNLL-TNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFR--LVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY 2522 +++++ +I D+PP F Q P P + S + +A++ Y + + + +A LD E + + + A G SL+G + L +N+ID ND+ P F ++ L + A + + + A D D G N K+ +S+ NE F I+ +TG I LDRE S L + +D G PP+S + + V++ D NDN P + I E+ + V + A D D ++S ++ + T+ SN ++ + I S I + + T I R I S + + D G P + I+++ + P F ++ +V EN + +SVL ++ +DN G+ + + I N ++ F I Q SG + +P+D+E ++ + + D +PS V++ + D+ND P +E +P GT+V +S D D+G G V A+ ++K F R ++ T D E + + V D G P + + +TI + D+NDN P + + G V++ P+ + I D D NA+L++ I + + F++ SG L N T + ++ L IK D G P L S + +I++V D +P + Sbjct: 1948 VQIVIGNIQDDPPRFLNQTP------ARVSIPENSKVGSYITTVRARASSDAQVTYSIISGNKGRAFYVDPFTGVISVASADALDYESTKNFRLHLVATPQGWV-SLNGYMILDINVIDRNDNSPAFHPSNM-LAQLAEDTGAFKPRFVVKVTATDVDSGTNGKVTYSIWTGNEAGV-------FTIDSTTGEITTAKLLDRETTASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDNPPLFDPLSEVNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKIDADTGVISARRTIDVRIRDSFIQIPVQAMDQGVPPQRALVYVRIIITRE----PKFELPSYFGKVPENAMMGTSVLTVRVTDNAAGLPLGRISYNIENSNY-FRIGQRSGVISVNKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDKGSFAIDRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDN-PPVFRVPGPNDVQVLENL-------PLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSF 2620 HSP 9 Score: 140.584 bits (353), Expect = 1.182e-33 Identity = 142/506 (28.06%), Postives = 233/506 (46.05%), Query Frame = 3 Query: 1062 GAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIE-CPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKL-SNVTLESTTYIKKSIVFTFELSTTSI-LDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVD--HTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSP-SFTTTAYVHVTIKDMNDVPPSL-VSYSMNPS--VAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFV--FRNLN----LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKP-----YFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNP 2516 G I LDRE + +L ++ + +PP+S + V + D NDN+P F+ ++ EN + + A D D G++S S +++ N FKL S + Y ++ +SI +DRE + +Y L I D G+P +SI V D NDN P F ++ + EN +S+L++ ASD DIG NA++ Y I T+ D F I+ T+G + +D+E + I + +D+GS +++A V + + D+ND P + VSY++ S V E+ GT V +SV D D+G GEV+V L + F F LN + DRE +D + + + D G P T I + D+ND P+ V N T++ +A + D D N++L Y I + + +F + P SG + + + L + V D G+P L +I+++ D ++P Sbjct: 12 GVITTKTVLDREKVSAYNLTIV--EFSTPPKS--YTVLVYVQDLNDNSPSFVRGTSAKLVVFENDKDFRQK--LIAVDSDFGSNSTQSYTIVSGNVGNVFKLISKRDTDGDLYAD------LVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSIETHSDPQAIFGIHPTTGVIVNNVRLDYEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVIHVSYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTLEGGDGYFSMKFDVLNDESIIAVGQSLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRV-WENATVN--------TLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDP 496 HSP 10 Score: 130.954 bits (328), Expect = 1.119e-30 Identity = 166/683 (24.30%), Postives = 285/683 (41.73%), Query Frame = 3 Query: 486 GMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRL--TNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHD----------------------------NDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYES-VHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENF-IIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDH-TFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSL-VSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFR----NLNLLTNLEFDREIND--KYSILVILRDNGQPRLTNSILLTITISDINDNRP---RLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILH-PDSGNLKLNSTCSV 2402 G +I+ I VI D NDN P F N + E+ + A D D N K+ Y + N FTI E+ A L LDRE + ++I D G P S + + V + D+ND+ P F L V I E + G + ++ A D D G+N+++++S +T+S ++ + I+ TG I +D I +S + + V D G PP+ + + +II E P E P F + EN ++V ++ D +G NI+ +N F++ ++S V +S LD E + LV+ D+ +P + I VSD ND P F +S + Q E + V+ + A+D D G N + + I + D +F I++ +G + +D E K +++ D+GSP T V + + D+ND PP V + V E++P + + ++ D D+G +S ++ + +F + L TN+ FD E +YS+ + D G P L+++I + + ++D ++ P R+ + PG IG + + D D ++ +F+ + P S LK+N+T + Sbjct: 2049 GYMILDINVI--DRNDNSPAFHPSNMLAQLAEDTGAFKPRFVVKVTATDVDSGTNGKVTYSIWTGNEAGVFTID--STTGEITTAKL--LDRETTASFDLVIRGTDSGIPPK-STNCQVKVVVTDLNDNPPLFDP----LSEVNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSF--PITNSDQID-YKIDADTGVISARRTIDVRIRDSFIQIPVQAMDQGVPPQRALVYVRIIITRE----PKFELPSYFGKVPENAMMGTSVLTVRVTDNAAGLPLGRIS--YNIENSNYFRIG----------QRSGV----ISVNKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDKGSFAIDRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSFNRMDYKFDVPG------------NAKIGDFVGQVTATDRDSGDQGRV----------FFVFYNPTSNALKMNATTGI 2675
BLAST of Protocadherin-11 X-linked vs. Ensembl Nematostella
Match: EDO48237 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKF4]) HSP 1 Score: 211.075 bits (536), Expect = 1.316e-55 Identity = 173/634 (27.29%), Postives = 295/634 (46.53%), Query Frame = 3 Query: 624 AIDQDIELNAKILYRLTNHKDKFTIKYIQIANELK-IAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFR-NLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNP 2516 A D D N I Y ++ ++ + Y I I + LDRE D++ ++A D G+P SL G ++LT+N++D+ND+ P F + N+ + I E IG + + A D D G+N ++++ + D+ A F I + +GA+ V +LDRE + L V D G+PPRS ++ + + + D ND P F + + I E+ V ++A D D G++ ++++ N F ++ + E K LD E I ++L++ D G P L N + I + D NDN P F S+F+ + EN +++A D D G N ++ + + N D F IN+ +G + E +D E+ + T I +D+G P TA + +T+ D+ND PP + S+AE+ GT V + IDPD+GP V + + FR N L L N K+ + V L+++ L+ + ++D N + P S VK +G S+ T+ D D NA+++Y I + P F + +G +K + + ++R + D+G P+L + + IH+ D ++P Sbjct: 44 ASDPDSGSNGMIRYSMSPSQNLMSATYFSIDQITGVITTKRGLDREFLDRHFFRVKAEDGGEP-SLEGYMDLTINVLDVNDNGPIFER---NIYAADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGDNSA---FSIGEVSGAVTVMKKLDREKVPTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVYSATIREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGNDMNFFSINRINGEVRVKQK--------------LDYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFSFMQN-DLPFSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQVKAIDPDSGPTNVVYSIVSSSGHDRCFRINPQGLITLSCTLNYNTKH-VYVFSVSASDGMLSSTALVYVNVTDSNTHAPEFKRRSYSAEVK---------EDASLGTSVLTVLATDRDTGSNAKISYSI-ATLVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDP 644 HSP 2 Score: 177.178 bits (448), Expect = 5.961e-45 Identity = 177/673 (26.30%), Postives = 293/673 (43.54%), Query Frame = 3 Query: 483 EGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNH---KDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSI-----LDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDH--TFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN--LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY-FIHESE-KPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTP 2456 EG + +TI V+ D+NDN PIF+ + I E+++ D + A D D N ++ Y + N F+I + A + ++ LDREK Y + ++A D G P S ++ + + ++D+ND P+FSK+ + S I E + Q + T+ A D D G+N ++ F ++ M F IN+ G + V +LD E+ +L V D G P N + + + D NDNAP F+ +I EN ++A+D D G + +T ++++ + F+ +T I LDRE + ++ I D G P + I+I + D NDN P F + + + EN +SVL++KA D D G +++Y I+++ H F IN G + +++ ++ D ++TA V+V + D N P S + V E GT V T+ D DTG ++S ++ +F + T DRE D Y V D+G P+L + I I+D+NDN P +K S + P G + + D DI +NAQ+ Y F + + F + G ++ + + L + D GTP Sbjct: 109 EGYMDLTINVL--DVNDNGPIFERNIYAADIPEDKSIGD--FVLAVRASDADSGSNGEVKYCILNSDGDNSAFSIGEVSGA----VTVMKKLDREKVPTYTLQVQAQDQGNPPR-SATVTVKITLLDVNDCTPQFSKK---VYSATIREDVPVNQLVTTVRATDCDQGSNGEVFF----EIVSGNDMNFFSINRINGEVRVKQKLDYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQTMIPENYAVGQEFYRVQAYDKDHGTN------------------GEITF---SFMQNDLPFSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQVKAIDPDSG-PTNVVYSIVSSSGHDRCFRIN-PQGLITLSCTLNYNTKHVYVFSVSASDG---MLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSIATLVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVF--------LKPSYEAKVREDIRP-GGRVIEVSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTP 730 HSP 3 Score: 169.474 bits (428), Expect = 1.709e-42 Identity = 169/638 (26.49%), Postives = 290/638 (45.45%), Query Frame = 3 Query: 501 TIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVD--HTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN-----LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHES-EKPYFILHPDSGNLKLN 2387 T+ + + D+NDN P F +F MI E A Y+ A D+D N +I + + F+I N I+ + LDREK K+ I+A D G P G+ +T+ ++DIND+ P+FS+E + I+E ++ G ++ + A D D G + + + S + F G I + L+ Y + H++V S++ + V + D N +AP F + ++E+ ++V + A D D+G+++ S + + P S E+T IK T LDRE + TY + D+G P+L + I ++D NDN P F + ++E +V E+ V+++ ASD DIG NA ++Y +N D TF I+ T G + ++P+D E + +T+ DQG+P + V V ++D+ D PP +V E P + V T+ D P + +++ + VF ++N + T ++ D E +Y + V R P T + ++ + + DINDN P L + V+ Y+ P +D D++ +LT+ + E K + L+ SG L +N Sbjct: 324 TVDIALIDVNDNAPQFVSSHFQTMIPENYAVGQEFYRVQ--AYDKDHGTNGEITFSFMQNDLPFSIN----ENTGGISIKEELDREKVPKFTFGIKARDKGVPFK-EGTAQITITLLDINDNPPKFSQEEYH---TSIAENSRWGTSVLQVKAIDPDSGPTNVVY-----SIVSSSGHDRCFRINPQGLITLSCTLN---YNTKHVYVFSVSASDGMLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSIATLVPEFSVD------ETTGVIK----------TAGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPSYEAKVREDIRPGGRVIEVSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPGQASVKVKVILEDVKDSPPLFEKPLYEVTVPEDTPPRSPVITVKAKSQDLSPETGMMYSIVRGNSPQVF-DINPNTGAIQTLMKLDYETQSEYRLTV--RATLSPFFTETTVM-VYLKDINDNTPVLEAFHMNINVQEGKVPPEARYKIPA---------YDPDVSD--KLTFKVMEGNAKEWVTLNATSGELSVN 912 HSP 4 Score: 153.68 bits (387), Expect = 1.135e-37 Identity = 120/435 (27.59%), Postives = 201/435 (46.21%), Query Frame = 3 Query: 912 ISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFI---IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNS-FKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFM-INQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFR----NLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTH 2189 +SE A++G +AT+ A D D G+N +++S++ + + +F I++ TG I LDRE + V D G P M LT+ + D NDN P E N I E++ V ++A D DSG++ ++N NS F + V+ + T +KK LDRE + TY+L + D G+P S + + I + D ND P F + + + E+ V ++A+D D G N ++ + I++ D F IN+ +G++ + +D+E + + +D+G P V + + D+ND P VS + E+ G + D D G GE++ + + +N F + E DRE K++ + RD G P + +TIT+ DINDN P+ + Sbjct: 29 VSEDAEVGTVVATVSASDPDSGSNGMIRYSMSPS-QNLMSATYFSIDQITGVITTKRGLDREFLDRHFFRVKAEDGGEPSLEGYMDLTINVLDVNDNGPIFE--RNIYAADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGDNSAFSIGEVS-GAVTVMKK-------------LDREKVPTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVYSATIREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGNDMNFFSINRINGEVRVKQKLDYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFSFM--QNDLPFSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQ 444 HSP 5 Score: 131.724 bits (330), Expect = 7.290e-31 Identity = 113/441 (25.62%), Postives = 200/441 (45.35%), Query Frame = 3 Query: 1194 NDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFII-TNVDHT-FMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFR----NLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVD 2498 N+ F E+ + E+ + V + A D DSG++ +I + S L + T S I T ++T LDRE + + + D G P L ++I V D NDN P F R+ + + E+K VL ++ASD D G N ++ Y I+ ++ D++ F I + SG + ++ +D E+ T+ + +DQG+P + T V +T+ D+ND P + ++ E +P +V T+ D D G GEV ++ + F N + + D E+ +++LV +D GQP L N + I + D+NDN P+ V QT+ +G + +D D N ++T+ +++ P F ++ ++G + + + F IK +D G P ++ I ++D Sbjct: 15 NNPPQFSRLQEDASVSEDAEVGTVVATVSASDPDSGSNG-----MIRYSMSPSQNLMSATYFSIDQI------TGVITTKRGLDREFLDRHFFRVKAEDGGEPSLEGYMDLTINVLDVNDNGPIFERNIYAADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGDNSAFSIGEVSGAVTVMKKLDREKVPTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVYSATIREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGNDMNFFSINRINGEVRVKQKLDYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQF--------VSSHFQTM-IPENYAVGQEFYRVQAYDKDHGTNGEITFSFMQNDLP-FSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLD 434
BLAST of Protocadherin-11 X-linked vs. Ensembl Nematostella
Match: EDO35412 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK9]) HSP 1 Score: 208.379 bits (529), Expect = 8.994e-55 Identity = 208/710 (29.30%), Postives = 320/710 (45.07%), Query Frame = 3 Query: 405 SGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIA----NELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIEC----PEN---FIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVD-HTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKF--VFRNLN-----LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSV-SDLGS--------FRLVIKVQDNG 2450 +G I ++ ISL L ++++V V+DINDN P F +T+ I+E + N I A D D N + Y + + + T A + L + + LDRE D Y + I A D G P +L G + + I+D ND P F++ S L S I+E K G +I + A D D G+N ++++++ S ++ F ++ STG I LD E+ S VI SD G P +++ +T+ + D NDN+P ++ P N I EN + + +I D DS +S + N FK+ + + F F + LDRE + Y+L + D G P S + I V+D NDN P F + + + E N S VL+L A+D D G N + Y I D F ++ SG + +P+D E+ +TITI +D GS T + V VTI D ND P + S +++E G V +S D D+G G ++ + + + +F LN L T + DRE YS V+ +D+G P+L +S+ + +TISDINDN P + S EP G + + D D NA ++Y I I ++GN ++S+ V S L S F L+I +D G Sbjct: 48 TGVISTTARIDRETTTQISLQLRTLNPSNQPISVQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTN--PINTATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTP-ALMGYCLINITILDENDHAPVFTQNSY-LGS--IAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSI--FDLDSSTGVIRTKQNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGCFKV------------EFLGFYF-IQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFE-LNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPV---------EYFASIMENEPPG-KLLQVTATDADEGTNAVISYDI--------IGGNNNGNFSIDSSTGVISTLASLDHEVEEFFSLIISAKDGG 717 HSP 2 Score: 173.326 bits (438), Expect = 7.575e-44 Identity = 172/665 (25.86%), Postives = 290/665 (43.61%), Query Frame = 3 Query: 531 DNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIY---ESVHLFVIVSDC---GSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLT---------NLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKL------NSTCSVSDLGSFRLVIKVQDNGTP 2456 ++PP F L ++ + Q P + + + +A+DQD N ++ Y + ++ I K+ ++L + K Y +I+ A D G P S S S+ +T+ I D ND + F N ++E + G + T+ AH D + +SL + HF ++ +G I LDRE +++++ ++ + + + + V + D NDNAP F + E S V IKA D D G ++ L++ + F +I S T EL + LDRE S+Y+LV+ D + L ++ I I V D ND P F S++ + + E+ + S V+ L ASD DIG N + Y I N+ F + +G L + +DFE + +TI +D G ++T V V + D+ND P + + +V E++ G V + D DTG ++ ++ F ++N T +LE D + ++V+ D G P+L+ +T+ ++D NDN P SP + ++ ++ TI D D N N ++TY I YF LHP +G L++ N T ++L I+ D G P Sbjct: 941 NHPPKFTLSSYVTHVLASQ-PLSYQFFYV-VAVDQDSGKNGQLFYSIPQGNEE---GLFGIFPGGKLYIRKSLLQALKGSYDLIVRATDGGVP-SFSASVPVTIYIQDSNDHRSLFVN---NTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLIS------SESHFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKF-----------FINSS---TGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKTF-SVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFV----SPPAAAAGSSL----------NVMTITAEDPDRNSNGKVTYSIISGNNGYFNLHPSTGQLQMIHQIPDNPTI-------YQLTIQASDGGQP 1554 HSP 3 Score: 166.392 bits (420), Expect = 1.124e-41 Identity = 176/634 (27.76%), Postives = 286/634 (45.11%), Query Frame = 3 Query: 318 SQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI----AIDQDIELNAKILYRLTNHK--DKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSL-NEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENI----STYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLN----LLTNLEFDRE-INDKYSILVILRDNGQPRL-TNSILLTITISDIN 2165 S ++ + ++DRE+L + +T S I + M ND I + + ++IVT V D+NDN P+F + I + E P P+ A+D D NAK Y L + DKF I EL ++ +TLDRE Y ++++A D + L + + + + D ND +P F + +V I+E A IG + + A D DIG N +++S+ N L AM F + +TG + V LD E + L + D G P S+++ +TV + D NDNAP F P + EN VG A D D+G +++ + + + P+ +F +++ T E ++T + +D E + ++ LV++ D GSP+LS K I++ V+D+NDN P F + +N V+ + A D D N + Y II+ + F ++ ++G L I I + +TI D G PS T V V + P+ S SV E+ GT V T+ P + G + L +K F + + T DRE + ++++V D P T+S +TIT+ D+N Sbjct: 1102 SGQITTRVRLDREELIK--NTGSNVYIMQAEA---MYNDTTI----------KRDKAIVIVT----VTDLNDNAPVFSRAVYAITVSELSLPGS------PVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFIN--SSTGELHLS--KTLDRETTSSYNLVVKATDASNAN-LYSTAKIEITVGDSNDQRPVFPESDY---TVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLA---AM--FDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKTFSVNSATCE--------------ITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVSP--PAAAAGSSLN---VMTITAEDPDRNSNGKVTYSIISGNNGYFNLHPSTGQLQMIHQIP-DNPTIYQLTIQASDGGQPSRQTQTVVSVFKEGPIGGGPTFSSADYQGSVTENKVAGTSVVTVLAAYPQSSLNGNIEYYLTSDSSKGGFEVVKSTGVVKTTRGIDREGMGASFNLVVYAVDKQGPSARTSSATVTITVQDVN 1677 HSP 4 Score: 144.436 bits (363), Expect = 7.899e-35 Identity = 168/668 (25.15%), Postives = 281/668 (42.07%), Query Frame = 3 Query: 498 VTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFT--IKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNV-DHTFMINQTSGDLYQIEPIDFER----HKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTN-LEFDREINDK---YSILVILRDNGQP-RLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI-HESEKPYFILHPDSGNLKLNSTCSVSDLG-SFRLVIKVQDNGTP 2456 V + + + D ND+ +F F + E +P + A+D I+Y L + + F ++ QI +++ + + + Y++ EA+ ++ + V + D+ND+ P FS+ + ++ +SE + G + I A D D G+N+K +S L M+ FFIN STG +H+ LDRE S +L V +D + ++ + + + D ND P F E I E+ S V + A D D G + LI + +SN L + ++ + T L LD E Y L I D+G LS++ +++ V D NDN P F + V EN V + ASD D G NA + + + + TF +N + ++ I ID E + + DQGSP +T + V + D ND P VS P+ A V T++ DPD G+V+ +++ N + NL+ T L+ +I D Y + + D GQP R T +++ I G P ++ S + + G S+ T+ + N + Y++ +S K F + +G +K +G SF LV+ D P Sbjct: 1034 VPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDH--SRTKDIVYSLISSESHFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAI-VIVTVTDLNDNAPVFSRA---VYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYS----LVSGTGMDKFFINSSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNG-----LIK------YSISNGNLAAMFDVESA---TGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVS---PPAAAAGSSLN--VMTITAEDPDRNSNGKVTYSIISGNNGYF--NLHPSTGQLQMIHQIPDNPTIYQLTIQASDGGQPSRQTQTVVSVFKEGPIG----------GGPTFSSADYQGSVTENKVAGTSVVTVLAAYPQSSLNGNIEYYLTSDSSKGGFEVVKSTGVVKTTRGIDREGMGASFNLVVYAVDKQGP 1660 HSP 5 Score: 143.28 bits (360), Expect = 1.676e-34 Identity = 167/695 (24.03%), Postives = 295/695 (42.45%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPI----AIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESL---NLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSL-NEKLTDSYAME--HFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITN---VDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF---RNLNLLTNL-EFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQE--PIGFSIATIYFHDDDINQNAQLTYFIHESEKP-YFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYA 2525 I + + D ND+ P+F ++ I E P + I A D+D N I Y + + + ++ I Q LD E K+ Y + A D G P S + +T+N++D ND+ P+ L N SE + I IA I D D NS+ + + N + +E F+ I + LDRE+ +L + V+D G P RS + + + D NDN+P F I E S V + A D D G + S +I N V +S ++T LDRE +S+ ++ I D+GS + S +++ + D NDN P F +S+++ + E ++VL++ A+D D G N + Y I ++ V+ F +N +G L+ +D E + T+ KD G P ++ V +TI D+ND P S+ E+ P G ++Q ++ D D G +S ++ N F + +++ L D E+ + +S+++ +D G + ++ +T+ + DN P + + +F+ E P G + +Y D +N ++Y I + F++ G +K+N + + L + + L + + I V+D + P ++ Sbjct: 192 INITILDENDHAPVFTQNSYLGSIAENTKPG------VSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDFEVKNSYTFNVIASDGGVP-SKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGCFKVEFLGFYF------IQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSY---SITGGNDLGWFQVDFQSGL-----------VTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIMENEPPGKLLQ-VTATDADEGTNAVISYDIIGGNNNGNFSIDSSTGVISTLASLDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLY-----------EMYNFTVYENVPKGTLVGRVYATTKD--KNGSISYAIVSGDPTNLFLVDSTGGIIKINGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFS 845 HSP 6 Score: 139.813 bits (351), Expect = 2.050e-33 Identity = 161/723 (22.27%), Postives = 311/723 (43.02%), Query Frame = 3 Query: 420 NMENDNKICFMLISLSLLEFQEGMII-VTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENI------STYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFII--TNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF----RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPI--GFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSV------SDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY 2522 +M+ + K ++L ++ + + + T+ + V D NDN P F + + I Y + A+D D N + Y+LT++ + + + +K+A + L + +Y + + A D G P S +T++I + P+F+ S + V S+ + + A D D G N +L +S+ + E F G +++ L + + S L V +D G P S S+ +T+ I D ND+ F+ F + EN + VG + A +D + + LI+ + + F + + + TT ++ LDRE + + Y + N + + ++ + V+D NDN P F R+ + I V E + S V ++KA D D G NA Y ++ T +D F IN ++G+L+ + +D E + + D + + +TA + +T+ D ND P ++ E G++V L+ D D G G + ++ +F L+ D E Y + + +D+G L++++ +T+ + D+NDN P Q ++ + +E + GF + D D NA + + ++ S+ P +S ++ + ++ + SF+LV+ D G+P+L + + + V D ++P + Sbjct: 801 DMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDIDGTWLVGQVVYNAA--AVDLDAGKNGLVRYQLTSNAEGL-LWINSTSGVIKLA--RKLTDGDETQYTVQVLASDSGSPPQHS---TMTIHITLSINHPPKFTLSSY-VTHVLASQ--PLSYQFFYVVAVDQDSGKNGQLFYSIPQG-----NEEGLFGIFPGGKLYIRKSLLQALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLISSE--SHFAVDVRSGQITTRVR--------------LDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDK-FFINSSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLF-----------PTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMY-SQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGF 1478 HSP 7 Score: 127.487 bits (319), Expect = 1.343e-29 Identity = 148/580 (25.52%), Postives = 254/580 (43.79%), Query Frame = 3 Query: 828 LNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSL-NEKLTDSYAMEHFFI-NKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNC--SCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFF-------HRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIE---PIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVAL-----LPWENKFVFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEK---PYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVD 2498 +++ V + DIND++PRF L I E + T A D D GNN + +++ + T ++++ ST + LDRE + L + +D G+P + + I DEND+AP F + I EN ++ + A D DSG++ + + D I+ + F L +S+T + + T LD E ++Y+ ++ D G P ++ ++I V D NDN P H + I+ EN + +++ + +D D N+ ITN D Y I+ P+D E +T+ D+G PS +T +V + + D+ND P+ S + +++E G+ V L+ DPD G G VS ++ L W + F++ + T DRE +I + +D+G T S +T+TI D NDN+PR S+ + S IG ++ + D D N ++TY I S+ F L+ +G L S + + +D+G P+L S +++ + + D Sbjct: 79 ISVQVQVDDINDNEPRFPTLYYTL---RIRESMDVNTTNPINTATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDL-----DSSTGV---------IRTKQNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRS-ENSLINTNIAYILVTDKDSNTNSQT-ELKITNGDDEGCFKVEFLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWF-QVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMK---------SSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISD 629 HSP 8 Score: 124.405 bits (311), Expect = 1.092e-28 Identity = 163/643 (25.35%), Postives = 266/643 (41.37%), Query Frame = 3 Query: 480 QEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQT-LDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFIS--EQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENK----FVFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQE--PIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNL 2378 + G VT+ +I D NDN P F ++ I E + Q A D D N +I Y +++ D ++ + + ++ LDRE K Y + A D G P +S S+ + + I DIND+ P F + F S E G+ + + A D D G N+ + + + + +F I+ STG I LD E+ E L + D G+ + + + V + ++ DN P F+ NF + EN + + VG + A D S S +++ PTN F ++ST I K +DRE + Y L ++ LS ++I V D+NDN P F S+ + + + V A D D G N + Y + +N + IN TSG + + Q T+ + D GSP +T +H+T+ +N PP S V P + +D D+G G++ + +P N+ +F L + + Y ++V D G P + S+ +TI I D ND+R N T F+ E G + T+ H D ++ + Y + SE +F + SG + Sbjct: 510 KTGSTTVTVTII--DGNDNKPRFMKSSYKGTISEGASIGATVLQVS--ATDVDSGDNGRITYEISS-SDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMS-SVKVELTISDINDNAPVFYP-----VEYFASIMENEPPGKLLQ-VTATDADEGTNAVISYDIIGGNNNG----NFSIDSSTGVISTLASLDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDKNGS--ISYAIVSGDPTNLF-----LVDSTGGIIK---------INGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTSNAEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSPPQHSTMTIHITLS-INH-PPKFTLSSYVTHVLASQPLSYQFFYVVAVDQDSGKNGQLFYS-IPQGNEEGLFGIFPGGKLYIRKSLLQALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFV-----------NNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLISSES-HFAVDVRSGQI 1105 HSP 9 Score: 103.219 bits (256), Expect = 3.369e-22 Identity = 118/519 (22.74%), Postives = 212/519 (40.85%), Query Frame = 3 Query: 1035 EHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNV---DHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKG------TVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNLEF------------DREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFI-HESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDY 2522 + F N +TG I +DRE + L + + P + +++ V ++D NDN P F I E+ +T A D D+G + + + T +F L + + T + T LDRE Y L I D G+P L LI+I + D+ND+ P F ++++ + EN S+L++ A+D D G N D+ Y I + + F ++ ++G + + +DFE T + D G PS A V + + D ND P L + P + + T + + V D D+ + + + +++ F+ +EF DRE+ Y++ + + D G P + + I ++D+NDN P T + + Q S+ Q + D D N ++Y I ++ +F + SG + + S + I QD+G+ + + ++DG + P + Sbjct: 40 KQFGFNSNTGVISTTARIDRETTTQISLQLRTLN----PSNQPISVQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGS--------TLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGCFK-------VEFLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQ---------LNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRF 530
BLAST of Protocadherin-11 X-linked vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079]) HSP 1 Score: 282.722 bits (722), Expect = 5.873e-80 Identity = 232/805 (28.82%), Postives = 382/805 (47.45%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANEL-----KIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGEL---------STVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITN--VDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRN--LNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFS---IATIYFHDDDINQNAQLTYFIHESEKPY--FILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHV 2492 Y + EEQ P +G++ D L L +LE P+ + K I+ + +DRE TL + G C +E + + +L + S ++ R+ V DINDN P F L TI + E SIP+A D+D E N Y LT D T+ +Q+A++ ++ L LDRE KD Y + I+A+D G P S +L L V + D ND+ P+F S +SE + +G ++ + A D+D+G N ++++SL++ + + I+++TG I+V LDRE S+ +V+ D G P+S+ +T+ + D+NDNAP +E ++ + G + V ++ D D G ++ +C + P F+L + +ST+ K+ + L TT+ LD E + Y + I+ D+G+P LS++ + + V+D NDN P F + FE+ E ++L + A+D D G NA+L Y I+ + + F I+ +G++ P+D E ++ + D+GSP TA V + + D ND P + + SV E+MP + V ++V+D D G V +++ P KFV +N +L+++ FDRE Y+ + D G+P ++ + +TI + D NDN P +T K SN SF P+ + + D D NA L + I PY F + P SG + L + G RLV++V D G P + + I+V Sbjct: 26 YRVQEEQPPNTLIGSLAADHGLPDSGHLYKLEVGA----PYLRVDGKTGDIF---------TTEIPIDRE-------TLRDCRSLVKGKPCYLEFEVSVTDLLQNPSPR-------LIEGRIEVQDINDNTPQFPLSVLTISVPENTIMGALF--SIPLATDRDSERNGVADYALTAGPDAATLFGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQAL-LRVVVTDANDNSPKFEHPSYE---AEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPVPKL--LRIDRTTGIIYVKGPLDREEINSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVP---FQLRPAS-DSTSDNKRK----YFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAHVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVT--------KPSNS--SFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSI-AGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYV 776 HSP 2 Score: 134.035 bits (336), Expect = 2.131e-31 Identity = 117/382 (30.63%), Postives = 186/382 (48.69%), Query Frame = 3 Query: 738 LQT---LDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNS-FKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHR---SNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKD 1856 LQT LD E+ +Y + I A+D G P +LS + +L V + D+ND+ P FS + V +E+ + G+TI + A D D G N++L +++ + DSY F I+ +TG + LDRE E V +D GSP + + + + D NDN P F+ +F + EN LS VG + DMD G +++ ++++P F + N T I SI F DRE S+Y+ + D G P S+ ++I V D+NDN P + S+F Q+ S V ++A D D G NADL++ I N F I+ +SG++ + + + + + D+G P TA VH+ + + Sbjct: 422 LQTTTPLDYERVKEYRVEIVAVDSGNP-ALSSTNSLKVQVTDVNDNSPVFSP---TIFEVDFAEENQPGETILDVTATDADSGTNAELFYNI---VGDSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAHVH---LSVEPDGGKFVVQN----GTGTILSSISF----------DREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKPSNSSFR-QLSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYVNE 778 HSP 3 Score: 76.2554 bits (186), Expect = 1.302e-13 Identity = 68/247 (27.53%), Postives = 111/247 (44.94%), Query Frame = 3 Query: 480 QEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIEC 1220 +G V I+V+ D NDN P F L ++ + E P + + +D D NA + + KF ++ I + DREK+ Y ++A+D G+P S + +T+N++D ND+ P +K S N +S A + + A D D G N+ L FS+ + F I+ S+G I + E+ R+ L V VSD G PPR + + + +N+ N +E Sbjct: 556 HKGTATVVIKVL--DCNDNDPKFMLSGYSFSVLENMPP--LSPVGMVTVLDMDKGENAHVHLSVEPDGGKFVVQ----NGTGTILSSISFDREKESSYTFRLKAVDGGEP-PRSSYVGVTINVLDENDNDPVVTKPS-NSSFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSI----AGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYVNETISNVSLVEA 788
BLAST of Protocadherin-11 X-linked vs. Ensembl Medaka
Match: pcdh1b (protocadherin-1 [Source:NCBI gene;Acc:101174755]) HSP 1 Score: 283.108 bits (723), Expect = 6.721e-80 Identity = 241/848 (28.42%), Postives = 398/848 (46.93%), Query Frame = 3 Query: 30 VNFRYFFFLYMLVILHFWCIISIKPFATNLLDQIGINFTYSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKL--CRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVI-----VNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANEL-----KIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECP-------ENFI--IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFII-TNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRN--LNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTIS-FSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPY--FILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHV 2492 V+FR + +L + C++ + + N Y ++EEQ P +G++ DL L L +LE + P+ + SK IY + +DRE L CR N+ D+K CF+ +S+ + +G I + R+I V DINDN P F P T+ I E SIP+A+D+D N Y L+ D + +Q+A ++ ++ + LDREKKD Y + I +D GKP S +L L + + D ND+ P+F K N + E + G ++ + A+D D G N + +SL++ I++STG I+V +DRE + +V+ D G +S+ +T+ I D+NDNAP IE +NF+ I E+ + V ++ D D G ++ +C + P F+L + + +K + L TT++LD E I Y + I+ D+G+P LS++ + + V+D NDN P F + E+ E+ V+ + A+D D G+NA+L+Y II ++ F IN +G++ +D E ++ + D+G PS T TA V + ++D ND P + + SV E+MP V ++V D D G +V++ + P KF+ +N +L+++ FDRE Y+ + D G P ++ + +TI + D NDN P +T K +N + + P + + D D NA+L Y I P+ F + +SG +KL + G RLV++V D G P + ++HV Sbjct: 4 VSFRVMLSGEDMAVLRWGCLVLLTIVLMVPCGAVPSNNIYKLSEEQPPNTLIGSLAADLGLPDSGHLYKLEVGS----PYLRVDSKTGEIY---------TTEIPIDRETLSDCR-----------------NLFEDDK-CFLEFEVSITDMVKG-IGLGPRLIEGIIEVLDINDNTPQFSSPILTLSIPENT--HTGTLFSIPVAVDRDSGSNGVAEYALSAGPDANQLFGLQVAEDVDEKIPQVIVIGNLDREKKDSYDLNIRVVDGGKPPRASSAL-LRITVTDQNDNAPKFEK---NQYEAELPENSPPGHSVLQVRANDADTGANGDIDYSLHQ--ASDTVQRLLRIDRSTGIIYVKGLVDREEDNLLKFYVVARDRGPNSKSSKAQVTISIKDQNDNAPAIEIRGIGLVIHQNFVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVP---FQLRPASESANDRKRK-----YFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPSFSPALLEVNFAEDNQPGDKVIDVVATDADSGVNAELVYSIIESSAASLFEINSNTGEIRVRNQLDREDVERYEFGVAAADKGVPSKTGTAIVVINVEDRNDNDPKFMLSGYSFSVNENMPPLNPVGVVTVSDADKGENSQVTLFVEPDNGKFIIQNGTGTILSSISFDREKESTYTFRLKAVDAGDPPRSSYVGVTINVLDENDNAPYVT--------KPANSSYTHLKPSSPPDTPVEVVKAEDIDAGVNAELYYTI-TGGNPHGLFQISHNSGEIKLAQGFTGKHKGLHRLVVRVSDKGKPPRHTT--ALVHV 792 HSP 2 Score: 144.05 bits (362), Expect = 1.702e-34 Identity = 141/578 (24.39%), Postives = 249/578 (43.08%), Query Frame = 3 Query: 840 VNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNE-----KLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPE-NFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFH--------RSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGD-------LYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFR-NLN---LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVD 2498 + ++DIND+ P+FS ++++ I E G + A D D G+N +++L+ +L E +++ + V LDRE +S L + V D G PPR++S L + + D+NDNAP E + + EN +V ++A D D+GA+ + S ++ T++ I +S + ++DRE + ++ D G S+ ++I + DQNDN P NF + E+ + V ++ SD D G NA + + +V S + L +D+ER K I I D G+P+ ++T + V + D+ND PS + + AE G V + D D+G E+ +++ +F N N + + DRE ++Y V D G P T + ++ I + D NDN P+ +S + S + P + + D D +N+Q+T F+ E + FI+ +G + + + ++ +K D G P S + + I+V+D Sbjct: 139 IEVLDINDNTPQFSSP---ILTLSIPENTHTGTLFSIPVAVDRDSGSNGVAEYALSAGPDANQLFGLQVAED--VDEKIPQVIVIGNLDREKKDSYDLNIRVVDGGKPPRASSALLRITVTDQNDNAPKFEKNQYEAELPENSPPGHSVLQVRANDADTGANGDIDY---------SLHQASDTVQRLLRIDRSTGIIY---VKGLVDREEDNLLKFYVVARDRGPNSKSSKAQVTISIKDQNDNAPAIEIRGIGLVIHQNFVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESANDRKRKYFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPSFSPALLEVNFAEDNQPGDKVIDVVATDADSGVNAELVYSIIESSAASLFEINSNTGEIRVRNQLDREDVERYEFGVAAADKGVPSKTGTAIVVINVEDRNDNDPKFM---------LSGYSFSVNENMPPLNPVGVVTVSDADKGENSQVTLFV-EPDNGKFIIQNGTGTILSSISFDREKESTYTFRLKAVDAGDPPRSSYVGVTINVLD 689 HSP 3 Score: 122.094 bits (305), Expect = 1.035e-27 Identity = 149/599 (24.87%), Postives = 253/599 (42.24%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTL-DREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLI-----SVFISEQAKIGQTIATIFAHDNDIGNNS--------KLQFSL---NEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-----FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCK--DQGSPSFTTTAYVHVTIKDMND-----VPPSLVSYS-MNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNLEFDREINDKYS----ILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIG 2198 +R+ V D NDN P F+ + + E P Q A D D N I Y L D + ++I I ++ L DRE+ + + A D G P+S S +T++I D ND+ P + L+ ISE IG +A + D D G N+ + F L +E D +F+ +T LD E + + ++ D G+P S++ +L V + D NDN P +E NF + G+ V + A D DSG ++ +I + F++++ T E+ + LDRE++ Y + D G P + + ++ I V D+NDN P F S + V EN L+ V + SD D G N+ + F+ + + F+I +G + + I F+R K+ T T K D G P ++ V + + D ND P+ SY+ + PS P T V+ + D D G E+ + +F+ + ++ + K+ ++V + D G+P + L+ + +++ +N + L+G Sbjct: 249 LRITVTDQNDNAPKFEKNQYEAELPENSPPGHSVLQVR--ANDADTGANGDIDYSLHQASDTVQ-RLLRIDRSTGIIYVKGLVDREEDNLLKFYVVARDRG-PNSKSSKAQVTISIKDQNDNAPAIEIRGIGLVIHQNFVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESANDR--KRKYFLQTTT-------LLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPSFSPALLEV--NFAEDNQPGD--KVIDVVATDADSGVNAELVYSIIESSAASLFEINS--------------NTGEIRVRNQLDREDVERYEFGVAAADKGVPSKTGTAIVVINVEDRNDNDPKFMLSGYSFSVNENMPPLNPVGVVTVSDADKGENSQVTLFVEPD-NGKFIIQNGTGTI--LSSISFDREKESTYTFRLKAVDAGDPPRSSYVGVTINVLDENDNAPYVTKPANSSYTHLKPS----SPPDTPVEVVKAEDIDAGVNAELYYTITGGNPHGLFQISHNSGEIKLAQGFTGKHKGLHRLVVRVSDKGKPPRHTTALVHVYVNETTNNVTLIEGLVG 809 HSP 4 Score: 70.8626 bits (172), Expect = 6.967e-12 Identity = 72/318 (22.64%), Postives = 138/318 (43.40%), Query Frame = 3 Query: 267 WSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVI-VSDCGSPPRSNSMALTVIINDENDNAPFIE 1217 +S S +++ ++N+ ++ ++ ++DRE + R++ ++ + + + G IV I V D NDN P F L ++ + E P N + D D N+++ + KF I+ I + DREK+ Y ++A+D G P S + +T+N++D ND+ P +K + N + + + + A D D G N++L +++ T F I+ ++G I + + ++ +H V+ VSD G PPR + + V +N+ +N IE Sbjct: 526 YSIIESSAASLFEINSNTGEIRVRNQLDREDVERYEFGVAAAD-----------------------KGVPSKTGTAIVVINV--EDRNDNDPKFMLSGYSFSVNENMPP--LNPVGVVTVSDADKGENSQVTLFVEPDNGKFIIQ----NGTGTILSSISFDREKESTYTFRLKAVDAGDP-PRSSYVGVTINVLDENDNAPYVTKPA-NSSYTHLKPSSPPDTPVEVVKAEDIDAGVNAELYYTI----TGGNPHGLFQISHNSGEIKLAQGFTGK-HKGLHRLVVRVSDKGKPPRHTTALVHVYVNETTNNVTLIE 805
BLAST of Protocadherin-11 X-linked vs. Ensembl Medaka
Match: pcdh1b (protocadherin-1 [Source:NCBI gene;Acc:101174755]) HSP 1 Score: 282.337 bits (721), Expect = 6.241e-79 Identity = 241/848 (28.42%), Postives = 398/848 (46.93%), Query Frame = 3 Query: 30 VNFRYFFFLYMLVILHFWCIISIKPFATNLLDQIGINFTYSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKL--CRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVI-----VNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANEL-----KIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECP-------ENFI--IEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFII-TNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRN--LNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTIS-FSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPY--FILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHV 2492 V+FR + +L + C++ + + N Y ++EEQ P +G++ DL L L +LE + P+ + SK IY + +DRE L CR N+ D+K CF+ +S+ + +G I + R+I V DINDN P F P T+ I E SIP+A+D+D N Y L+ D + +Q+A ++ ++ + LDREKKD Y + I +D GKP S +L L + + D ND+ P+F K N + E + G ++ + A+D D G N + +SL++ I++STG I+V +DRE + +V+ D G +S+ +T+ I D+NDNAP IE +NF+ I E+ + V ++ D D G ++ +C + P F+L + + +K + L TT++LD E I Y + I+ D+G+P LS++ + + V+D NDN P F + E+ E+ V+ + A+D D G+NA+L+Y II ++ F IN +G++ +D E ++ + D+G PS T TA V + ++D ND P + + SV E+MP V ++V D D G +V++ + P KF+ +N +L+++ FDRE Y+ + D G P ++ + +TI + D NDN P +T K +N + + P + + D D NA+L Y I P+ F + +SG +KL + G RLV++V D G P + ++HV Sbjct: 4 VSFRVMLSGEDMAVLRWGCLVLLTIVLMVPCGAVPSNNIYKLSEEQPPNTLIGSLAADLGLPDSGHLYKLEVGS----PYLRVDSKTGEIY---------TTEIPIDRETLSDCR-----------------NLFEDDK-CFLEFEVSITDMVKG-IGLGPRLIEGIIEVLDINDNTPQFSSPILTLSIPENT--HTGTLFSIPVAVDRDSGSNGVAEYALSAGPDANQLFGLQVAEDVDEKIPQVIVIGNLDREKKDSYDLNIRVVDGGKPPRASSAL-LRITVTDQNDNAPKFEK---NQYEAELPENSPPGHSVLQVRANDADTGANGDIDYSLHQ--ASDTVQRLLRIDRSTGIIYVKGLVDREEDNLLKFYVVARDRGPNSKSSKAQVTISIKDQNDNAPAIEIRGIGLVIHQNFVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVP---FQLRPASESANDRKRK-----YFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPSFSPALLEVNFAEDNQPGDKVIDVVATDADSGVNAELVYSIIESSAASLFEINSNTGEIRVRNQLDREDVERYEFGVAAADKGVPSKTGTAIVVINVEDRNDNDPKFMLSGYSFSVNENMPPLNPVGVVTVSDADKGENSQVTLFVEPDNGKFIIQNGTGTILSSISFDREKESTYTFRLKAVDAGDPPRSSYVGVTINVLDENDNAPYVT--------KPANSSYTHLKPSSPPDTPVEVVKAEDIDAGVNAELYYTI-TGGNPHGLFQISHNSGEIKLAQGFTGKHKGLHRLVVRVSDKGKPPRHTT--ALVHV 792 HSP 2 Score: 142.895 bits (359), Expect = 4.908e-34 Identity = 141/579 (24.35%), Postives = 249/579 (43.01%), Query Frame = 3 Query: 840 VNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFF------INKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPE-NFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFH--------RSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGD-------LYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFR-NLN---LLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVD 2498 + ++DIND+ P+FS ++++ I E G + A D D G+N +++L+ A + F +++ + V LDRE +S L + V D G PPR++S L + + D+NDNAP E + + EN +V ++A D D+GA+ + S ++ T++ I +S + ++DRE + ++ D G S+ ++I + DQNDN P NF + E+ + V ++ SD D G NA + + +V S + L +D+ER K I I D G+P+ ++T + V + D+ND PS + + AE G V + D D+G E+ +++ +F N N + + DRE ++Y V D G P T + ++ I + D NDN P+ +S + S + P + + D D +N+Q+T F+ E + FI+ +G + + + ++ +K D G P S + + I+V+D Sbjct: 139 IEVLDINDNTPQFSSP---ILTLSIPENTHTGTLFSIPVAVDRDSGSNGVAEYALS---AGPDANQLFGLQVAEDVDEKIPQVIVIGNLDREKKDSYDLNIRVVDGGKPPRASSALLRITVTDQNDNAPKFEKNQYEAELPENSPPGHSVLQVRANDADTGANGDIDY---------SLHQASDTVQRLLRIDRSTGIIY---VKGLVDREEDNLLKFYVVARDRGPNSKSSKAQVTISIKDQNDNAPAIEIRGIGLVIHQNFVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESANDRKRKYFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPSFSPALLEVNFAEDNQPGDKVIDVVATDADSGVNAELVYSIIESSAASLFEINSNTGEIRVRNQLDREDVERYEFGVAAADKGVPSKTGTAIVVINVEDRNDNDPKFM---------LSGYSFSVNENMPPLNPVGVVTVSDADKGENSQVTLFV-EPDNGKFIIQNGTGTILSSISFDREKESTYTFRLKAVDAGDPPRSSYVGVTINVLD 689 HSP 3 Score: 121.324 bits (303), Expect = 1.973e-27 Identity = 149/599 (24.87%), Postives = 253/599 (42.24%), Query Frame = 3 Query: 504 IRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTL-DREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLI-----SVFISEQAKIGQTIATIFAHDNDIGNNS--------KLQFSL---NEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-----FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCK--DQGSPSFTTTAYVHVTIKDMND-----VPPSLVSYS-MNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNLEFDREINDKYS----ILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIG 2198 +R+ V D NDN P F+ + + E P Q A D D N I Y L D + ++I I ++ L DRE+ + + A D G P+S S +T++I D ND+ P + L+ ISE IG +A + D D G N+ + F L +E D +F+ +T LD E + + ++ D G+P S++ +L V + D NDN P +E NF + G+ V + A D DSG ++ +I + F++++ T E+ + LDRE++ Y + D G P + + ++ I V D+NDN P F S + V EN L+ V + SD D G N+ + F+ + + F+I +G + + I F+R K+ T T K D G P ++ V + + D ND P+ SY+ + PS P T V+ + D D G E+ + +F+ + ++ + K+ ++V + D G+P + L+ + +++ +N + L+G Sbjct: 249 LRITVTDQNDNAPKFEKNQYEAELPENSPPGHSVLQVR--ANDADTGANGDIDYSLHQASDTVQ-RLLRIDRSTGIIYVKGLVDREEDNLLKFYVVARDRG-PNSKSSKAQVTISIKDQNDNAPAIEIRGIGLVIHQNFVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESANDR--KRKYFLQTTT-------LLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPSFSPALLEV--NFAEDNQPGD--KVIDVVATDADSGVNAELVYSIIESSAASLFEINS--------------NTGEIRVRNQLDREDVERYEFGVAAADKGVPSKTGTAIVVINVEDRNDNDPKFMLSGYSFSVNENMPPLNPVGVVTVSDADKGENSQVTLFVEPD-NGKFIIQNGTGTI--LSSISFDREKESTYTFRLKAVDAGDPPRSSYVGVTINVLDENDNAPYVTKPANSSYTHLKPS----SPPDTPVEVVKAEDIDAGVNAELYYTITGGNPHGLFQISHNSGEIKLAQGFTGKHKGLHRLVVRVSDKGKPPRHTTALVHVYVNETTNNVTLIEGLVG 809 HSP 4 Score: 70.0922 bits (170), Expect = 1.082e-11 Identity = 65/245 (26.53%), Postives = 110/245 (44.90%), Query Frame = 3 Query: 486 GMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVI-VSDCGSPPRSNSMALTVIINDENDNAPFIE 1217 G IV I V D NDN P F L ++ + E P N + D D N+++ + KF I+ I + DREK+ Y ++A+D G P S + +T+N++D ND+ P +K + N + + + + A D D G N++L +++ T F I+ ++G I + + ++ +H V+ VSD G PPR + + V +N+ +N IE Sbjct: 576 GTAIVVINV--EDRNDNDPKFMLSGYSFSVNENMPP--LNPVGVVTVSDADKGENSQVTLFVEPDNGKFIIQ----NGTGTILSSISFDREKESTYTFRLKAVDAGDP-PRSSYVGVTINVLDENDNAPYVTKPA-NSSYTHLKPSSPPDTPVEVVKAEDIDAGVNAELYYTI----TGGNPHGLFQISHNSGEIKLAQGFTGK-HKGLHRLVVRVSDKGKPPRHTTALVHVYVNETTNNVTLIE 805
BLAST of Protocadherin-11 X-linked vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079]) HSP 1 Score: 281.567 bits (719), Expect = 1.696e-78 Identity = 232/805 (28.82%), Postives = 382/805 (47.45%), Query Frame = 3 Query: 147 YSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANEL-----KIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGEL---------STVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITN--VDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRN--LNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFS---IATIYFHDDDINQNAQLTYFIHESEKPY--FILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHV 2492 Y + EEQ P +G++ D L L +LE P+ + K I+ + +DRE TL + G C +E + + +L + S ++ R+ V DINDN P F L TI + E SIP+A D+D E N Y LT D T+ +Q+A++ ++ L LDRE KD Y + I+A+D G P S +L L V + D ND+ P+F S +SE + +G ++ + A D+D+G N ++++SL++ + + I+++TG I+V LDRE S+ +V+ D G P+S+ +T+ + D+NDNAP +E ++ + G + V ++ D D G ++ +C + P F+L + +ST+ K+ + L TT+ LD E + Y + I+ D+G+P LS++ + + V+D NDN P F + FE+ E ++L + A+D D G NA+L Y I+ + + F I+ +G++ P+D E ++ + D+GSP TA V + + D ND P + + SV E+MP + V ++V+D D G V +++ P KFV +N +L+++ FDRE Y+ + D G+P ++ + +TI + D NDN P +T K SN SF P+ + + D D NA L + I PY F + P SG + L + G RLV++V D G P + + I+V Sbjct: 103 YRVQEEQPPNTLIGSLAADHGLPDSGHLYKLEVGA----PYLRVDGKTGDIF---------TTEIPIDRE-------TLRDCRSLVKGKPCYLEFEVSVTDLLQNPSPR-------LIEGRIEVQDINDNTPQFPLSVLTISVPENTIMGALF--SIPLATDRDSERNGVADYALTAGPDAATLFGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQAL-LRVVVTDANDNSPKFEHPSYE---AEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPVPKL--LRIDRTTGIIYVKGPLDREEINSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVP---FQLRPAS-DSTSDNKRK----YFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAHVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVT--------KPSNS--SFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSI-AGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYV 853 HSP 2 Score: 133.65 bits (335), Expect = 3.634e-31 Identity = 117/382 (30.63%), Postives = 186/382 (48.69%), Query Frame = 3 Query: 738 LQT---LDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAP-FIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNS-FKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHR---SNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIIT-NVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKD 1856 LQT LD E+ +Y + I A+D G P +LS + +L V + D+ND+ P FS + V +E+ + G+TI + A D D G N++L +++ + DSY F I+ +TG + LDRE E V +D GSP + + + + D NDN P F+ +F + EN LS VG + DMD G +++ ++++P F + N T I SI F DRE S+Y+ + D G P S+ ++I V D+NDN P + S+F Q+ S V ++A D D G NADL++ I N F I+ +SG++ + + + + + D+G P TA VH+ + + Sbjct: 499 LQTTTPLDYERVKEYRVEIVAVDSGNP-ALSSTNSLKVQVTDVNDNSPVFSP---TIFEVDFAEENQPGETILDVTATDADSGTNAELFYNI---VGDSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAHVH---LSVEPDGGKFVVQN----GTGTILSSISF----------DREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKPSNSSFR-QLSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYVNE 855 HSP 3 Score: 76.2554 bits (186), Expect = 1.432e-13 Identity = 68/247 (27.53%), Postives = 111/247 (44.94%), Query Frame = 3 Query: 480 QEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIEC 1220 +G V I+V+ D NDN P F L ++ + E P + + +D D NA + + KF ++ I + DREK+ Y ++A+D G+P S + +T+N++D ND+ P +K S N +S A + + A D D G N+ L FS+ + F I+ S+G I + E+ R+ L V VSD G PPR + + + +N+ N +E Sbjct: 633 HKGTATVVIKVL--DCNDNDPKFMLSGYSFSVLENMPP--LSPVGMVTVLDMDKGENAHVHLSVEPDGGKFVVQ----NGTGTILSSISFDREKESSYTFRLKAVDGGEP-PRSSYVGVTINVLDENDNDPVVTKPS-NSSFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSI----AGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYVNETISNVSLVEA 865
BLAST of Protocadherin-11 X-linked vs. Ensembl Medaka
Match: pcdh11 (protocadherin-11 X-linked [Source:NCBI gene;Acc:101161492]) HSP 1 Score: 273.478 bits (698), Expect = 1.721e-76 Identity = 214/736 (29.08%), Postives = 348/736 (47.28%), Query Frame = 3 Query: 342 KVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPL---QTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIIN--DENDNAPFIECP-------ENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVF--RNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTY--------FIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELI 2483 ++DREKLC S +F+ K C+ I +++L E +V IR ++ D+NDN P+FQ I I E A + Y +P A D D+ +N Y L +F + I+ K L Q LDREK+D +++ I+ D G P S ++ L V I D+ND++P F L V + E A G ++A + A D D G+N+++ F+ + +++ S HF IN STG I V LDRE+ L V+ SD GS P TVI+N D NDN P I+ ++ EN + + I D D+ +C + P F+L V + F L T + LD E Y++ I+ D G+P L+ S ++ I + D+NDN P F + ++ + EN + ++K+ A+D D G NA+++Y + + F I++ SG L + +D E+ ++ + + +D GS + V + ++D+ND P+ N V E++P V ++V D D G +++++L ++ F+ + + N+ FDRE Y+ +V D GQP ++ +TI + D+NDNRP + P S + + G + ++ D+D NA+L Y S + F + SGN+ L +DLG RLV+KV+D G P + L+ Sbjct: 90 RIDREKLC--------SGVFTE----------KRCYYEIEVAVLP-DEIFRLVKIRFLIEDVNDNAPLFQSTVINISIPENTA-INTRY-PVPSAFDPDVGINGIQNYELVKSVTEFGLDIIETPEGDKWPQLIVQQNLDREKRDTFVMKIKVEDGGNPPKSSTAI-LQVTISDVNDNRPIFQDSEL---EVSVPENAPTGTSVAQLHATDADWGSNAQIHFAFSNQISSS-TKRHFAINSSTGLITVKQPLDREVTPVHKLIVLASDGGSTPSR----ATVIVNVTDVNDNVPAIDTRYIINLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVP---FRLKPVFNDQ-----------FLLETAAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENNDPSTQLIKISATDADSGSNAEIIYTLGPDAPDGFHIDRRSGILSVGKRLDREKQERFSFIVIARDNGSTPLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAAITLSILNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAIDGGQPPTSSYAKVTINVVDVNDNRP----VFVIPSSNYSYDLVRTTTTP--GAVVTRVFAIDNDTGMNAELQYSIISSIIITSRVSPRGLFTIDKISGNITLQEKIVGADLGLHRLVVKVRDLGQPESLQAITLV 775 HSP 2 Score: 160.614 bits (405), Expect = 1.025e-39 Identity = 165/609 (27.09%), Postives = 267/609 (43.84%), Query Frame = 3 Query: 756 EKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTG----AIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPE-NFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGI---NADLLYFIITNVDH--TFMINQTSGDLYQIE---PIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLP--WENKFVFRNLNLLT-NLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQE--PIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAI 2528 EK+ Y I + + PD + + + I D+ND+ P F +I++ I E I A D D+G N + L + +T+ + ++ I G + V LDRE ++ + + V D G+PP+S++ L V I+D NDN P + E + EN ++V + A D D G+++ F SN ST T ++ LDRE + L++L D GS + + + V+D NDN+P + + I +V V LS L I + +ADL + DH F + D + +E P+D+E ++ I I D+G+P T+A V + IKD ND P + S+ E+ T + +S D D+G E+ L P + + R +L+ DRE +++S +VI RDNG L +++ + + + D+NDN P TH +F E P+ ++ I D D NA +T I K FI+ P +G +K N T S+ ++K D G P S ++ I+VVD + P + I Sbjct: 103 EKRCYYEIEVAVL----PDEIFRLVKIRFLIEDVNDNAPLFQS---TVINISIPENTAINTRYPVPSAFDPDVGINGIQNYELVKSVTE-FGLD--IIETPEGDKWPQLIVQQNLDREKRDTFVMKIKVEDGGNPPKSSTAILQVTISDVNDNRPIFQDSELEVSVPENAPTGTSVAQLHATDADWGSNAQIH-----------FAFSNQISSSTKRHFAINSSTGLITVKQPLDREVTPVHKLIVLASDGGS--TPSRATVIVNVTDVNDNVPAID-TRYIINLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLETAAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENNDPSTQLIKISATDADSGSNAEIIYTLGPDAPDGFHIDRRSGILSVGKRLDREKQERFSFIVIARDNGSTPLQSNVTVRLIVQDLNDNSPAFTH-----------PEYNFYVPENLPLYGTVGLITVTDADAGDNAAITLSILNG-KDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAIDGGQPPTSSYAKVTINVVDVNDNRPVFVI 675
BLAST of Protocadherin-11 X-linked vs. Planmine SMEST
Match: SMESG000023518.1 (SMESG000023518.1) HSP 1 Score: 1915.97 bits (4962), Expect = 0.000e+0 Identity = 976/982 (99.39%), Postives = 977/982 (99.49%), Query Frame = 3 Query: 60 MLVILHFWCIISIKPFATNLLDQIGINFTYSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAIITNFRIVLIVIPTLIGISFSVILLFVIKTVQKQKANRLINHNTKQIYTKKENSINKNDPVNDEALMELXXXXXXXXXXXXXXXIGYSSFLPCMDSHTMIFQPGYVLTIDTSMIGSGSKLNILXXXXXXXXXXXXETNLQENHGCNLSNVTFKPAGVKKL 3005 MLVILHFWCIISIKPFATNLLDQIGINFTYSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLC+FQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQ IATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIE IDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQE IGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAIITNFRIVLIVIPTLIGISFSVILLFVIKTVQKQKANRLINHNTKQIYTKKENSINKNDPVNDEALMELYPTSSCYSTYPSETCIGYSSFLPCMDSHTMIFQPGYVLTIDTSMIGSGSKLNILDTSTDSGNGDSSETNLQENHGCNLSNVTFKPA VKK Sbjct: 1 MLVILHFWCIISIKPFATNLLDQIGINFTYSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCQFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQKIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEAIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQETIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAIITNFRIVLIVIPTLIGISFSVILLFVIKTVQKQKANRLINHNTKQIYTKKENSINKNDPVNDEALMELYPTSSCYSTYPSETCIGYSSFLPCMDSHTMIFQPGYVLTIDTSMIGSGSKLNILDTSTDSGNGDSSETNLQENHGCNLSNVTFKPADVKKF 982
BLAST of Protocadherin-11 X-linked vs. Planmine SMEST
Match: SMESG000023518.1 (SMESG000023518.1) HSP 1 Score: 1852.03 bits (4796), Expect = 0.000e+0 Identity = 945/951 (99.37%), Postives = 946/951 (99.47%), Query Frame = 3 Query: 153 MNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAIITNFRIVLIVIPTLIGISFSVILLFVIKTVQKQKANRLINHNTKQIYTKKENSINKNDPVNDEALMELXXXXXXXXXXXXXXXIGYSSFLPCMDSHTMIFQPGYVLTIDTSMIGSGSKLNILXXXXXXXXXXXXETNLQENHGCNLSNVTFKPAGVKKL 3005 MNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLC+FQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQ IATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIE IDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQE IGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAIITNFRIVLIVIPTLIGISFSVILLFVIKTVQKQKANRLINHNTKQIYTKKENSINKNDPVNDEALMELYPTSSCYSTYPSETCIGYSSFLPCMDSHTMIFQPGYVLTIDTSMIGSGSKLNILDTSTDSGNGDSSETNLQENHGCNLSNVTFKPA VKK Sbjct: 1 MNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCQFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQKIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENKVNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEAIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQETIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNGTPRLFSLLELIIHVVDGPSSNPDYAIITNFRIVLIVIPTLIGISFSVILLFVIKTVQKQKANRLINHNTKQIYTKKENSINKNDPVNDEALMELYPTSSCYSTYPSETCIGYSSFLPCMDSHTMIFQPGYVLTIDTSMIGSGSKLNILDTSTDSGNGDSSETNLQENHGCNLSNVTFKPADVKKF 951
BLAST of Protocadherin-11 X-linked vs. Planmine SMEST
Match: SMESG000014227.1 (SMESG000014227.1) HSP 1 Score: 308.916 bits (790), Expect = 2.867e-89 Identity = 254/803 (31.63%), Postives = 403/803 (50.19%), Query Frame = 3 Query: 84 CIISIKPFATNLLDQIGINFTYSMNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEE-QAPSDWNYQSIPIAIDQDIELNAKILYRLTNHK--DKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNS-FKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGS--PRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENK----VNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIG----FSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNG 2450 C+I+ + I NFTY+M EE PP LGN+I DL+L ++S+ L+ +L+F P +Q SKF I S Q L L K DRE C T + SK+ ++ CIC D C+ I L L ++ +++ ++DINDN P F I I E+ Q S + +P+A DQD LNA I Y+ ++ D + I L + LDRE Y +II A D G S+S SL + + ++D+ND P F+ L++ ++ISE + + + A D DIG+N ++ +SL + + A + F IN S G I + ++ DRE L + D GS PRS+S+ ++V I D NDN P I P N EN + + D+D N SC + + NS F+L S + I + V + L T I DRE+ S Y++ ++C D+ S R+S S IS+ + D NDN P + N+ + +N+ N + ++ A D DIG+N+ + YFII + F ++ +G L+Q+ +D+E+ + + IG +D G+PS T++ + I D ND P ++ S+AE+ GTV+ L++ D D+G G + L ++F L+ + FDRE ++YS+ ++D G+P L + L I I D+NDN P + + P + NQT+ F+Y F + + D D N+ L +FI E +F + +G + L S S++G+ + + V+D G Sbjct: 21 CLINFLFIQKTFQELIFPNFTYTMKEEIIPPYNLGNLITDLKLRSIISINDLQPQSLSFLPSNQFGSKFLTIVFHSYLYQYLTLTKVFDREINCDLLSTKTISKVSTNKCIC-QNYDPFRCYFYIVLVLAPVHHSNMVFILQIFIDDINDNSPQFTKKEIQISIPEDAQLNSRF---PLPVAEDQDWNLNAVIDYKSFPNESFDIIIVDRFSINQTLYMTIKTNLDREIAQNYTLIIIASDRGIEISMSTSLTVQITVLDVNDCSPTFT--DLSIKPLYISEDIFVPSQLLIVNATDLDIGDNGQITYSLEIQPFSNLA-QTFSINPSNGEIRIISKPDREKQAFFTLIIWAQDHGSIPRSSSVKVSVNIIDVNDNDPIINGPSNPETYENNKTPLIISTYRITDLD--IHHNISCIIAKNQLENSVFQLK----RSKSMISQESV--YHLITQHIFDRESQSDYNITLICRDDFSDISRVS-SLTISLTILDLNDNSPELSK-NYNLSFRQNESYLPYNNDCITQISAIDKDIGLNSQIEYFIIHSDQQAFTVHLITGKLFQLNSLDYEKGSKCFVVIGARDSGNPSLTSSLTLTFDIIDTNDNAPHYDGPTI-VSIAENNLIGTVLIVLNISDKDSGLSGMTTSILTYKSDEFSLVENQLVALVSFDREKQNEYSVKFKMKDFGEPPLISIQELVIKILDVNDNHPTILY----PSI---NQTMVFAYNHYFPRQKIFQVTAV---DSDEGLNSNLRFFI-EPYSEFFQIDFKTGWISLKQYLSSSNIGNLSINLVVRDCG 794
BLAST of Protocadherin-11 X-linked vs. Planmine SMEST
Match: SMESG000014227.1 (SMESG000014227.1) HSP 1 Score: 298.901 bits (764), Expect = 6.030e-86 Identity = 247/780 (31.67%), Postives = 392/780 (50.26%), Query Frame = 3 Query: 153 MNEEQDPPIYLGNIIHDLRLDKVLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQKKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEE-QAPSDWNYQSIPIAIDQDIELNAKILYRLTNHK--DKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNS-FKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGS--PRLSNSKLISILVSDQNDNIPFFHRSNFEIQVVENK----VNLSSVLKLKASDNDIGINADLLYFIITNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNPSVAEHMPKGTVVQTLSVIDPDTGPGGEVSVALLPWENKFVFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIG----FSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKVQDNG 2450 M EE PP LGN+I DL+L ++S+ L+ +L+F P +Q SKF I S Q L L K DRE C T + SK+ ++ CIC D C+ I L L ++ +++ ++DINDN P F I I E+ Q S + +P+A DQD LNA I Y+ ++ D + I L + LDRE Y +II A D G S+S SL + + ++D+ND P F+ L++ ++ISE + + + A D DIG+N ++ +SL + + A + F IN S G I + ++ DRE L + D GS PRS+S+ ++V I D NDN P I P N EN + + D+D N SC + + NS F+L S + I + V + L T I DRE+ S Y++ ++C D+ S R+S S IS+ + D NDN P + N+ + +N+ N + ++ A D DIG+N+ + YFII + F ++ +G L+Q+ +D+E+ + + IG +D G+PS T++ + I D ND P ++ S+AE+ GTV+ L++ D D+G G + L ++F L+ + FDRE ++YS+ ++D G+P L + L I I D+NDN P + + P + NQT+ F+Y F + + D D N+ L +FI E +F + +G + L S S++G+ + + V+D G Sbjct: 1 MKEEIIPPYNLGNLITDLKLRSIISINDLQPQSLSFLPSNQFGSKFLTIVFHSYLYQYLTLTKVFDREINCDLLSTKTISKVSTNKCIC-QNYDPFRCYFYIVLVLAPVHHSNMVFILQIFIDDINDNSPQFTKKEIQISIPEDAQLNSRF---PLPVAEDQDWNLNAVIDYKSFPNESFDIIIVDRFSINQTLYMTIKTNLDREIAQNYTLIIIASDRGIEISMSTSLTVQITVLDVNDCSPTFT--DLSIKPLYISEDIFVPSQLLIVNATDLDIGDNGQITYSLEIQPFSNLA-QTFSINPSNGEIRIISKPDREKQAFFTLIIWAQDHGSIPRSSSVKVSVNIIDVNDNDPIINGPSNPETYENNKTPLIISTYRITDLD--IHHNISCIIAKNQLENSVFQLK----RSKSMISQESV--YHLITQHIFDRESQSDYNITLICRDDFSDISRVS-SLTISLTILDLNDNSPELSK-NYNLSFRQNESYLPYNNDCITQISAIDKDIGLNSQIEYFIIHSDQQAFTVHLITGKLFQLNSLDYEKGSKCFVVIGARDSGNPSLTSSLTLTFDIIDTNDNAPHYDGPTI-VSIAENNLIGTVLIVLNISDKDSGLSGMTTSILTYKSDEFSLVENQLVALVSFDREKQNEYSVKFKMKDFGEPPLISIQELVIKILDVNDNHPTILY----PSI---NQTMVFAYNHYFPRQKIFQVTAV---DSDEGLNSNLRFFI-EPYSEFFQIDFKTGWISLKQYLSSSNIGNLSINLVVRDCG 751
BLAST of Protocadherin-11 X-linked vs. Planmine SMEST
Match: SMESG000053027.1 (SMESG000053027.1) HSP 1 Score: 282.722 bits (722), Expect = 9.695e-82 Identity = 239/778 (30.72%), Postives = 387/778 (49.74%), Query Frame = 3 Query: 129 IGINFTYSMNEEQDPPIYLGNIIHDLRLDK-VLSLKQLEENTLTFFPWSQASSKFYMIYKDSANSQKLVLQ--KKVDREKLCRFQHTLSKSKIFSSGCICNMENDNKICFMLISLSLLEFQEGMIIVTIRVIVNDINDNPPIFQLPNFTIMIKEEQAPSDWNYQSIPIAIDQDIELNAKILYRLTNHKDKFTIKYIQIANELKIAPLQTLDREKKDKYLIIIEAIDCGKPDSLSGSLNLTVNIIDINDSQPRFSKESLNLISVFISEQAKIGQTIATIFAHDNDIGNNSKLQFSLNEKLTDSYAMEHFFINKSTGAIHVWNELDREIYESVHLFVIVSDCGSPPRSNSMALTVIINDENDNAPFIECPENFIIEENRGELSTVGFIKAFDMDSGASSNCSCDLINIKPTNSFKLSNVTLESTTYIKKSIVFTFELSTTSILDRENISTYSLVILCHDNGSPRLSNSKLISILVSDQNDNIP-FFHRSNF-EIQVVENKVNLSSVLKLKASDNDIGINADLLYFII-TNVDHTFMINQTSGDLYQIEPIDFERHKQITITIGCKDQGSPSFTTTAYVHVTIKDMNDVPPSLVSYSMNP-SVAEHMPKGTVVQTLSVIDPDT-GPGGEVSVALLPWENKFVFRNLNLLTNLEFDREINDKYSILVILRDNGQPRLTNSILLTITISDINDNRPRLTHLIGSPGVKISNQTISFSYQEPIGFSIATIYFHDDDINQNAQLTYFIHESEKPYFILHPDSGNLKLNSTCSVSDLGSFRLVIKV 2438 + I Y + EEQ PPI LGN++ DL+L+ S L ++ FFP Q + I + +L+ +++DREKLC+ HT S SK C C +N+N C++ ++ +Q M + + + + DINDN PIF FT+ I E ++ +IP A D+D ++ I Y L F++ Y N L+I +TLDRE KY + + ID + S +G L LT+ + DIND P+F + IS + E + IGQ + + D D GNNS + F LN D +++HF IN +G + + LDRE + L ++ D GSP +++SM + +I+ D NDN+P I+ I ENR S + D D G +S +C+L++ + F L+ + + V+T+++ T I DRE + Y+ VI C DNG L+ + IL+ D+ND P F + NF I ++EN + + + K +A D DI N L+Y I+ + F +N ++G L+ D+E K + I +D + + + I + ND P +++ N + E++ ++ V+D D V L+ EN FV LNL+T F+RE DK+ I +I+RD + +L+N ++ + I D+ND P P + + + S I F IA I D D NA+L+Y ++ YF + P SG LK+ + + +L S ++++ + Sbjct: 21 VSITINYQLVEEQPPPIILGNLLDDLKLNSNSFSKSDL---SINFFPMQQPGVTLFKI-------ENFLLKAVERIDREKLCK-SHTRSISKT-KDICFC-FKNENN-CYIRFNILQTPYQSLMNLHEVNIRIVDINDNYPIFTPNFFTLRISE--GSEIGSFFNIPKANDKDNIVHESITYILFPLSSSFSVVYQN--NSLRIKLKETLDRESIYKYNLKVLGIDKIEDLSNTGVLTLTIIVEDINDCSPKFLDSATRNIS--LPETSIIGQVVYVVQVTDCDSGNNSIIHFYLNNNGQDE-SLQHFSINPISGEVSIIEPLDRESIQGYVLIILAKDLGSPSKTSSMTINIIVTDINDNSPIIKIDPILFISENRPIRSVLTTFTVEDYDEGDNSRVTCELLSHETHPPFSLNFM-------FNRLFVYTYKIETNFIFDREKKTFYNFVIHCQDNGVNNLTTDVKVLILIEDENDFSPKFTNAHNFSSISIMENTLFPNPIFKFQAIDPDIKENGKLVYSIMRSRYPLRFRLNASTGYLFANGIFDYELVKTYELEIKVEDSSPHPLCSIIHFIINIINENDNSPEIINLGDNRIFIQENISINNIIFRFHVLDRDNENDSCSADVFLVNNENHFVIMGLNLITTDYFNREQKDKFQITIIVRDKEKHQLSNVYVVDVFIEDVNDCVPEFVF----PSKE--STPLEISCDVSIDFVIAQISARDGDSGYNAKLSYQLYNYNH-YFFMDPFSGFLKVRN--KLKELSSRQIILNI 761 The following BLAST results are available for this feature:
BLAST of Protocadherin-11 X-linked vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Protocadherin-11 X-linked vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Protocadherin-11 X-linked vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Protocadherin-11 X-linked vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Protocadherin-11 X-linked vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Protocadherin-11 X-linked vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Protocadherin-11 X-linked vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Protocadherin-11 X-linked vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Protocadherin-11 X-linked vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Protocadherin-11 X-linked vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Protocadherin-11 X-linked vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Protocadherin-11 X-linked vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Protocadherin-11 X-linked vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Protocadherin-11 X-linked vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30017705 ID=SMED30017705|Name=Protocadherin-11 X-linked|organism=Schmidtea mediterranea sexual|type=transcript|length=3096bpback to top protein sequence of SMED30017705-orf-1 >SMED30017705-orf-1 ID=SMED30017705-orf-1|Name=SMED30017705-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1003bp MLVILHFWCIISIKPFATNLLDQIGINFTYSMNEEQDPPIYLGNIIHDLRback to top Annotated Terms
The following terms have been associated with this transcript:
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