Poly(RC)-binding protein 3
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30017635 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 8
Homology
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Human
Match: PCBP3 (poly(rC) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:8651]) HSP 1 Score: 194.897 bits (494), Expect = 8.677e-55 Identity = 132/355 (37.18%), Postives = 194/355 (54.65%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFP------------YPLIPVKLQGPI--SHFIPNLSNDS---LIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC ++LE +PY PK P G + + S + N+SL P+ YT Q Y I P P P+ P +P S++ L+ S+ + E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAAS--------TANLSLLLQHPPL---------PAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 351 HSP 2 Score: 51.6026 bits (122), Expect = 3.991e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 88 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 163
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Human
Match: PCBP3 (poly(rC) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:8651]) HSP 1 Score: 194.897 bits (494), Expect = 8.677e-55 Identity = 132/355 (37.18%), Postives = 194/355 (54.65%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFP------------YPLIPVKLQGPI--SHFIPNLSNDS---LIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC ++LE +PY PK P G + + S + N+SL P+ YT Q Y I P P P+ P +P S++ L+ S+ + E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAAS--------TANLSLLLQHPPL---------PAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 351 HSP 2 Score: 51.6026 bits (122), Expect = 3.991e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 88 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 163
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Human
Match: PCBP3 (poly(rC) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:8651]) HSP 1 Score: 194.897 bits (494), Expect = 1.014e-54 Identity = 124/336 (36.90%), Postives = 186/336 (55.36%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC ++LE +PY PK + + T + P + LA P PL + FP +P+ + + S ++T+ T + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPA------------FPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELT---------IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 360 HSP 2 Score: 51.2174 bits (121), Expect = 5.024e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 120 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Human
Match: PCBP3 (poly(rC) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:8651]) HSP 1 Score: 190.274 bits (482), Expect = 4.725e-53 Identity = 124/337 (36.80%), Postives = 186/337 (55.19%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISP-TFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC ++LE +PY PK + + T + P + LA P PL + FP +P+ + + S ++T+ T + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPA------------FPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELT---------IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 361 HSP 2 Score: 51.2174 bits (121), Expect = 5.039e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 120 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Human
Match: PCBP3 (poly(rC) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:8651]) HSP 1 Score: 187.963 bits (476), Expect = 2.025e-52 Identity = 124/336 (36.90%), Postives = 183/336 (54.46%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +I C +L PK G+ I S +I F+ + +P + DQ++ P G + P L D+ +ST E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI---------CVVMLESPPK-------GATIPYRPKPASTPVI---FAGGQAYTIQGQYAIP---------HPDQLTKLHQLAMQQTPFPPLGQTNPAFPGL--DASPPAST----------HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 341 HSP 2 Score: 51.2174 bits (121), Expect = 4.558e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 120 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Celegans
Match: pes-4 (Patterned Expression Site [Source:UniProtKB/TrEMBL;Acc:Q95Y67]) HSP 1 Score: 142.51 bits (358), Expect = 3.321e-36 Identity = 76/157 (48.41%), Postives = 107/157 (68.15%), Query Frame = 2 Query: 761 STNPKNSSEN----CLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSV 1219 S +P+ +S + L+IR+LM GKEVGSIIGK+GD IKK REES A+INISDG+ PERIVTI+GT I A ++C KFE D L S+ P+++R+++ A Q +++G GG +IK ++E T A+I E L S+ER +TLSGT+D++ Sbjct: 57 SCSPRETSPSTTSLVLTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGSCPERIVTITGTLGVIGKAFNMVCNKFEEDMLL-LPNSVPKP--PITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERAVTLSGTADAI 210 HSP 2 Score: 50.0618 bits (118), Expect = 4.895e-6 Identity = 24/67 (35.82%), Postives = 41/67 (61.19%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLICK 985 +++R+++ + GS+IGK G IK RE + A I ++ +S ER VT+SGT+ I+ M +C+ Sbjct: 153 ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERAVTLSGTADAINLCMTQVCQ 219
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Celegans
Match: hrpk-1 (Heterogeneous nuclear RibonucleoProtein (HnRNP) K homolog [Source:UniProtKB/TrEMBL;Acc:Q8I7G9]) HSP 1 Score: 78.5666 bits (192), Expect = 3.555e-15 Identity = 42/142 (29.58%), Postives = 74/142 (52.11%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSV 1219 +R+L+S K G+IIGK G+NIK+ R E A + + D N+PER+ T++ + + +K + + E++F S P +R+L+ ++G G +IK+L+E A + S++R+L SG +V Sbjct: 33 FEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLEDNF---------SERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQKNV 165 HSP 2 Score: 50.8322 bits (120), Expect = 2.286e-6 Identity = 26/57 (45.61%), Postives = 37/57 (64.91%), Query Frame = 2 Query: 830 GSIIGKRGDNIKKFREESMARINISDGNS-PERIVTISGTSRQIHYAMKLICKKFEN 997 G+IIG+ G+ I + R+ES A+I + N PERI+TI GT +QIH A L+ + N Sbjct: 312 GTIIGRGGERIARIRQESGAQITLEQSNGQPERIITIKGTEQQIHSAQYLLQQCVRN 368
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Celegans
Match: hrpk-1 (Heterogeneous nuclear RibonucleoProtein (HnRNP) K homolog [Source:UniProtKB/TrEMBL;Acc:Q8I7G9]) HSP 1 Score: 78.5666 bits (192), Expect = 3.555e-15 Identity = 42/142 (29.58%), Postives = 74/142 (52.11%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSV 1219 +R+L+S K G+IIGK G+NIK+ R E A + + D N+PER+ T++ + + +K + + E++F S P +R+L+ ++G G +IK+L+E A + S++R+L SG +V Sbjct: 33 FEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLEDNF---------SERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQKNV 165 HSP 2 Score: 50.8322 bits (120), Expect = 2.286e-6 Identity = 26/57 (45.61%), Postives = 37/57 (64.91%), Query Frame = 2 Query: 830 GSIIGKRGDNIKKFREESMARINISDGNS-PERIVTISGTSRQIHYAMKLICKKFEN 997 G+IIG+ G+ I + R+ES A+I + N PERI+TI GT +QIH A L+ + N Sbjct: 312 GTIIGRGGERIARIRQESGAQITLEQSNGQPERIITIKGTEQQIHSAQYLLQQCVRN 368
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Celegans
Match: hrpk-1 (Heterogeneous nuclear RibonucleoProtein (HnRNP) K homolog [Source:UniProtKB/TrEMBL;Acc:Q8I7G9]) HSP 1 Score: 78.5666 bits (192), Expect = 4.313e-15 Identity = 42/142 (29.58%), Postives = 74/142 (52.11%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSV 1219 +R+L+S K G+IIGK G+NIK+ R E A + + D N+PER+ T++ + + +K + + E++F S P +R+L+ ++G G +IK+L+E A + S++R+L SG +V Sbjct: 50 FEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLEDNF---------SERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQKNV 182 HSP 2 Score: 50.8322 bits (120), Expect = 2.410e-6 Identity = 26/57 (45.61%), Postives = 37/57 (64.91%), Query Frame = 2 Query: 830 GSIIGKRGDNIKKFREESMARINISDGNS-PERIVTISGTSRQIHYAMKLICKKFEN 997 G+IIG+ G+ I + R+ES A+I + N PERI+TI GT +QIH A L+ + N Sbjct: 329 GTIIGRGGERIARIRQESGAQITLEQSNGQPERIITIKGTEQQIHSAQYLLQQCVRN 385
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Celegans
Match: hrpk-1 (Heterogeneous nuclear RibonucleoProtein (HnRNP) K homolog [Source:UniProtKB/TrEMBL;Acc:Q8I7G9]) HSP 1 Score: 50.8322 bits (120), Expect = 8.215e-8 Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPER 925 +R+L+S K G+IIGK G+NIK+ R E A + + D N+PER Sbjct: 50 FEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPER 93
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Fly
Match: mub (gene:FBgn0262737 transcript:FBtr0111017) HSP 1 Score: 176.407 bits (446), Expect = 6.484e-47 Identity = 131/348 (37.64%), Postives = 194/348 (55.75%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISH--FIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSED---GKQERKISICGSYDSVQTAQILINSSLQLYKQTL 1822 L+IR++M GKEVGSIIGK+G+ + +FREES A+INISDG+ PERIVT+SGT+ I A LI KKFE ++ + + + IR+++ A Q +++G G +IK++++ T +I E L S+ER +TLSG+++ + CI +IC ++LE +PY PK P G I N + T N ++ T + PL ++ + + P G I+H + L+ L ++ N QQ E V N++IGCIIG+GG+ I EIR +SGA I+ISN E+ G +R I+I G+ DSV AQ LIN S++L K L Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKFE-EWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPK--PQV-TGPVILANG-------QAFTIQGNYAVPTQEVAKNPLASLAALGLAG------------MNPASTGG-INHTAALAALAGSQLRTANPANRAQQQQ--HEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANL 345
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Fly
Match: mub (gene:FBgn0262737 transcript:FBtr0304981) HSP 1 Score: 171.4 bits (433), Expect = 9.360e-47 Identity = 130/350 (37.14%), Postives = 191/350 (54.57%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFE--NDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSED---GKQERKISICGSYDSVQTAQILINSSLQLYKQTLKL 1828 L+IR++M GKEVGSIIGK+G+ + +FREES A+INISDG+ PERIVT+SGT+ I A LI KKFE ND K + + +P IR+++ A Q +++G G +IK++++ T +I E L S+ER +TLSG+++ + CI +IC ++LE +PY PK P G I N + T N ++ T + PL ++ + + P G + L+ L ++ N QQ E V N++IGCIIG+GG+ I EIR +SGA I+ISN E+ G +R I+I G+ DSV AQ LIN + + L + Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKFEEFNDVGK-----VGKTQIP--IRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPK--PQV-TGPVILANG-------QAFTIQGNYAVPTQEVAKNPLASLAALGLAG------------MNPASTGGINHTALAALAGSQLRTANPANRAQQQQ--HEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGLPI 342
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Fly
Match: mub (gene:FBgn0262737 transcript:FBtr0333222) HSP 1 Score: 171.4 bits (433), Expect = 9.360e-47 Identity = 130/350 (37.14%), Postives = 191/350 (54.57%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFE--NDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSED---GKQERKISICGSYDSVQTAQILINSSLQLYKQTLKL 1828 L+IR++M GKEVGSIIGK+G+ + +FREES A+INISDG+ PERIVT+SGT+ I A LI KKFE ND K + + +P IR+++ A Q +++G G +IK++++ T +I E L S+ER +TLSG+++ + CI +IC ++LE +PY PK P G I N + T N ++ T + PL ++ + + P G + L+ L ++ N QQ E V N++IGCIIG+GG+ I EIR +SGA I+ISN E+ G +R I+I G+ DSV AQ LIN + + L + Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKFEEFNDVGK-----VGKTQIP--IRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPK--PQV-TGPVILANG-------QAFTIQGNYAVPTQEVAKNPLASLAALGLAG------------MNPASTGGINHTALAALAGSQLRTANPANRAQQQQ--HEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGLPI 342
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Fly
Match: mub (gene:FBgn0262737 transcript:FBtr0304984) HSP 1 Score: 176.022 bits (445), Expect = 1.308e-46 Identity = 137/373 (36.73%), Postives = 201/373 (53.89%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLAT-NSLPILPLQNIYSSSYYTDQMSYPI-NFPYPLIP-VKLQG--PISHF----IPNLSNDSL-------------IKSSTTNHFT-----QQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSED---GKQERKISICGSYDSVQTAQILINSSLQLYKQTL 1822 L+IR++M GKEVGSIIGK+G+ + +FREES A+INISDG+ PERIVT+SGT+ I A LI KKFE ++ + + + IR+++ A Q +++G G +IK++++ T +I E L S+ER +TLSG+++ + CI +IC ++LE +PY PK P G I N + T N ++ T + P+ PL + T + I PL+ LQG P H +P+++ + L + NH Q E V N++IGCIIG+GG+ I EIR +SGA I+ISN E+ G +R I+I G+ DSV AQ LIN S++L K L Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKFE-EWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPK--PQV-TGPVILANG-------QAFTIQGNYAVPTQETCPVFPL------ALATGGLHAGISGLADPLLKGAHLQGAIPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANL 379
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Fly
Match: mub (gene:FBgn0262737 transcript:FBtr0078470) HSP 1 Score: 170.244 bits (430), Expect = 2.383e-46 Identity = 128/350 (36.57%), Postives = 192/350 (54.86%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISH--FIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSED---GKQERKISICGSYDSVQTAQILINSSLQLYKQTLKL 1828 L+IR++M GKEVGSIIGK+G+ + +FREES A+INISDG+ PERIVT+SGT+ I A LI KKFE ++ + + + IR+++ A Q +++G G +IK++++ T +I E L S+ER +TLSG+++ + CI +IC ++LE +PY PK P G I N + T N ++ T + PL ++ + + P G I+H + L+ L ++ N QQ E V N++IGCIIG+GG+ I EIR +SGA I+ISN E+ G +R I+I G+ DSV AQ LIN + + L + Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKFE-EWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPK--PQV-TGPVILANG-------QAFTIQGNYAVPTQEVAKNPLASLAALGLAG------------MNPASTGG-INHTAALAALAGSQLRTANPANRAQQQQ--HEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGLPI 347
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Zebrafish
Match: pcbp3 (poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]) HSP 1 Score: 196.052 bits (497), Expect = 1.272e-55 Identity = 129/338 (38.17%), Postives = 192/338 (56.80%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT +++ C+ +IC ++LE +PY PK P G + + S +S + L LP +Q Y+ + DQ++ P G + P L D+ +ST E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQVRADPLAASAANLS------LLLQHQPLPAYTIQGQYAIP-HPDQLTKLHQLAMQQTPFTPLGQTTPAFPGL--DASPPAST----------HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARL 334 HSP 2 Score: 52.373 bits (124), Expect = 1.395e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 90 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQIC 165
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Zebrafish
Match: pcbp3 (poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]) HSP 1 Score: 195.282 bits (495), Expect = 2.373e-55 Identity = 128/339 (37.76%), Postives = 192/339 (56.64%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQ 1804 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT +++ C+ +IC ++LE +PY PK P G + + S +S + L LP +Q Y+ + DQ++ P G + P L D+ +ST E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ + Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQVRADPLAASAANLS------LLLQHQPLPAYTIQGQYAIP-HPDQLTKLHQLAMQQTPFTPLGQTTPAFPGL--DASPPAST----------HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARFR 335 HSP 2 Score: 52.373 bits (124), Expect = 1.229e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 90 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQIC 165
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Zebrafish
Match: pcbp3 (poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]) HSP 1 Score: 195.282 bits (495), Expect = 2.373e-55 Identity = 128/339 (37.76%), Postives = 192/339 (56.64%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQ 1804 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT +++ C+ +IC ++LE +PY PK P G + + S +S + L LP +Q Y+ + DQ++ P G + P L D+ +ST E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ + Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQVRADPLAASAANLS------LLLQHQPLPAYTIQGQYAIP-HPDQLTKLHQLAMQQTPFTPLGQTTPAFPGL--DASPPAST----------HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARFR 335 HSP 2 Score: 52.373 bits (124), Expect = 1.229e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 90 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQIC 165
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Zebrafish
Match: pcbp3 (poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]) HSP 1 Score: 195.282 bits (495), Expect = 2.373e-55 Identity = 128/339 (37.76%), Postives = 192/339 (56.64%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQ 1804 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT +++ C+ +IC ++LE +PY PK P G + + S +S + L LP +Q Y+ + DQ++ P G + P L D+ +ST E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ + Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQVRADPLAASAANLS------LLLQHQPLPAYTIQGQYAIP-HPDQLTKLHQLAMQQTPFTPLGQTTPAFPGL--DASPPAST----------HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARFR 335 HSP 2 Score: 52.373 bits (124), Expect = 1.229e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 90 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQIC 165
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Zebrafish
Match: pcbp2 (poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]) HSP 1 Score: 187.578 bits (475), Expect = 7.019e-53 Identity = 124/336 (36.90%), Postives = 188/336 (55.95%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I +K E D + + S +S P+++RI++ A Q +++G GG +IK+++E T A + + L S+ER +T++GT S+ C+ +IC ++LE +PY PK GS + F+ + A +P ++ Q S P+PL P QG F + + T +H E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ A+ LIN+ L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIEKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPK-----PSGSPV--------------IFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS-----PFPLAPSS-QG----FTAGMDAS----AQTGSH--------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSSDRQVTITGSPASISLAEYLINARL 308
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Xenopus
Match: ENSXETT00000046774.1 (poly(rC) binding protein 3 [Source:NCBI gene;Acc:100490531]) HSP 1 Score: 198.749 bits (504), Expect = 1.682e-56 Identity = 128/338 (37.87%), Postives = 189/338 (55.92%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC ++LE +PY PK P G + + S +S + L LP +Q Y+ + DQ++ P G + P + S Q E + N++IGCIIGR G+ INEIR +SGAQIKI+++ +G ER+I+I GS ++ AQ LIN+ L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASAPVIFAGGQVRADPLGASTANLS------LLLQHQPLPAYSIQGQYAIP-HPDQLTKLHQLAMQQTPFTPLGQTTPAFPGMDASS------------QASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIASAMEGSAERQITITGSPANISLAQYLINARL 332 HSP 2 Score: 51.2174 bits (121), Expect = 4.176e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 163
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Xenopus
Match: ENSXETT00000046760.1 (poly(rC) binding protein 3 [Source:NCBI gene;Acc:100490531]) HSP 1 Score: 198.749 bits (504), Expect = 2.977e-56 Identity = 131/346 (37.86%), Postives = 196/346 (56.65%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPY---PLIPVKLQGPI--SHFIPNLSNDS---LIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC ++LE +PY PK P G + + S +S + L LP +Q Y+ + DQ++ P P+ P +P S++ L+ S + Q E + N++IGCIIGR G+ INEIR +SGAQIKI+++ +G ER+I+I GS ++ AQ LIN+ L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASAPVIFAGGQVRADPLGASTANLS------LLLQHQPLPAYSIQGQYAIP-HPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSAGMDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIASAMEGSAERQITITGSPANISLAQYLINARL 352 HSP 2 Score: 51.2174 bits (121), Expect = 4.442e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 163
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Xenopus
Match: pcbp2 (poly(rC) binding protein 2 [Source:NCBI gene;Acc:733863]) HSP 1 Score: 196.052 bits (497), Expect = 4.739e-54 Identity = 138/384 (35.94%), Postives = 213/384 (55.47%), Query Frame = 2 Query: 758 ESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHL--PYTDVGSAIAINT--CNTSNKMI------SPTFS---------DNMSLATNSLPILPL-----QNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKLKSV 1837 ++ P+ L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+G+ PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC ++LE +PY PK P G + T + N + +P F+ ++S A + +L L Q++ S+ Q++ P P+ G + P L S T++H E + N++IGCIIGR GS INEIR +SGAQIKI+N+ +G ER+++I GS ++ AQ LIN+SL++ K + + SV Sbjct: 5 DANAPEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASGPIIFAGGQVRAETILASAGNHTVLAQPQPAPAFAIQGQYAIPHPDVSSAHANYTLLFLFICFGQHLLSTLTKLHQLAMQHT---PFTPL---GQTTPGFPGLDAT----SPTSSH--------ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANASEGNGERQVTITGSPANISLAQYLINASLEMAKLSTQTASV 370
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Xenopus
Match: cert1 (ceramide transporter 1 [Source:Xenbase;Acc:XB-GENE-1002414]) HSP 1 Score: 193.356 bits (490), Expect = 2.975e-53 Identity = 130/346 (37.57%), Postives = 192/346 (55.49%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPK--HLPYTDVGSAIAI----NTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYK 1813 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S SS P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T++G S+ C+ +IC ++LE +PY PK P G ++ + C T + + +SL L YT Q Y I P +L SHF +S+ S + Q E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ AQ LIN SL+ K Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDL----------HGAYTIQGQYAIPQPDLTKLHQLAMQQSHF--PMSHSGNTGFSGGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGSTASISLAQYLINVSLETAK 347
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Xenopus
Match: cert1 (ceramide transporter 1 [Source:Xenbase;Acc:XB-GENE-1002414]) HSP 1 Score: 187.578 bits (475), Expect = 2.634e-52 Identity = 128/342 (37.43%), Postives = 189/342 (55.26%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPK--HLPYTDVGSAIAI----NTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S SS P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T++G S+ C+ +IC ++LE +PY PK P G ++ + C T + + +SL L YT Q Y I P +L SHF +S+ S + Q E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ AQ LIN L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDL----------HGAYTIQGQYAIPQPDLTKLHQLAMQQSHF--PMSHSGNTGFSGGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGSTASISLAQYLINVRL 343
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Mouse
Match: Pcbp3 (poly(rC) binding protein 3 [Source:MGI Symbol;Acc:MGI:1890470]) HSP 1 Score: 194.512 bits (493), Expect = 9.398e-55 Identity = 126/336 (37.50%), Postives = 186/336 (55.36%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC ++LE +PY PK + + T + P + LA P PL + FP +P+ H N L+ S+ + E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPA------------FPGEKLPL-------HSSEEAQN--LMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 360 HSP 2 Score: 51.2174 bits (121), Expect = 3.572e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 120 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Mouse
Match: Pcbp2 (poly(rC) binding protein 2 [Source:MGI Symbol;Acc:MGI:108202]) HSP 1 Score: 190.274 bits (482), Expect = 2.041e-53 Identity = 130/343 (37.90%), Postives = 194/343 (56.56%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFP-----YPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T++G S+ C+ +IC ++LE +PY PK P G +T + S P + +M L + L PL+ YT Q Y I P + L + P++H S + TT+H E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ AQ LIN L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASF--PHTTPSMCLNPD-LEGPPLE------AYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSH--------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRL 339
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Mouse
Match: Pcbp3 (poly(rC) binding protein 3 [Source:MGI Symbol;Acc:MGI:1890470]) HSP 1 Score: 189.889 bits (481), Expect = 4.462e-53 Identity = 126/337 (37.39%), Postives = 186/337 (55.19%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISP-TFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC ++LE +PY PK + + T + P + LA P PL + FP +P+ H N L+ S+ + E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPA------------FPGEKLPL-------HSSEEAQN--LMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 361 HSP 2 Score: 51.2174 bits (121), Expect = 3.646e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 120 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Mouse
Match: Pcbp3 (poly(rC) binding protein 3 [Source:MGI Symbol;Acc:MGI:1890470]) HSP 1 Score: 189.889 bits (481), Expect = 4.462e-53 Identity = 126/337 (37.39%), Postives = 186/337 (55.19%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISP-TFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC ++LE +PY PK + + T + P + LA P PL + FP +P+ H N L+ S+ + E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPA------------FPGEKLPL-------HSSEEAQN--LMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 361 HSP 2 Score: 51.2174 bits (121), Expect = 3.646e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 120 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Mouse
Match: Pcbp2 (poly(rC) binding protein 2 [Source:MGI Symbol;Acc:MGI:108202]) HSP 1 Score: 186.808 bits (473), Expect = 3.881e-52 Identity = 133/347 (38.33%), Postives = 195/347 (56.20%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSND--SLIKSSTTN-------HFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T++G S+ C+ +IC ++LE +PY PK P G +T + S P + +M L + L PL+ YT Q Y I P +L SHF N S I+SS+ + Q E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ AQ LIN L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASF--PHTTPSMCLNPD-LEGPPLE------AYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRL 351
BLAST of Poly(RC)-binding protein 3 vs. UniProt/SwissProt
Match: sp|P57721|PCBP3_HUMAN (Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 2.269e-52 Identity = 124/337 (36.80%), Postives = 186/337 (55.19%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISP-TFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC ++LE +PY PK + + T + P + LA P PL + FP +P+ + + S ++T+ T + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPA------------FPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELT---------IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 361
BLAST of Poly(RC)-binding protein 3 vs. UniProt/SwissProt
Match: sp|P57722|PCBP3_MOUSE (Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3) HSP 1 Score: 189.889 bits (481), Expect = 3.121e-52 Identity = 126/337 (37.39%), Postives = 186/337 (55.19%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISP-TFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT D++ C+ +IC ++LE +PY PK + + T + P + LA P PL + FP +P+ H N L+ S+ + E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPA------------FPGEKLPL-------HSSEEAQN--LMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 361
BLAST of Poly(RC)-binding protein 3 vs. UniProt/SwissProt
Match: sp|Q61990|PCBP2_MOUSE (Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 3.572e-51 Identity = 133/348 (38.22%), Postives = 195/348 (56.03%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSND--SLIKSSTTN--------HFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T++G S+ C+ +IC ++LE +PY PK P G +T + S P + +M L + L PL+ YT Q Y I P +L SHF N S I+SS+ + Q E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ AQ LIN L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASF--PHTTPSMCLNPD-LEGPPLE------AYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRL 352
BLAST of Poly(RC)-binding protein 3 vs. UniProt/SwissProt
Match: sp|Q15366|PCBP2_HUMAN (Poly(rC)-binding protein 2 OS=Homo sapiens OX=9606 GN=PCBP2 PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 2.399e-50 Identity = 131/351 (37.32%), Postives = 193/351 (54.99%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXX-XXXXXXXXSNCP---YVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSL--IKSSTTN-------HFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T++G S+ C+ + +L +S P +PY PK P G +T + S P + +M L + L PL+ YT Q Y I P +L SHF N I+SS+ + Q E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ AQ LIN L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASF--PHTTPSMCLNPD-LEGPPLE------AYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRL 355
BLAST of Poly(RC)-binding protein 3 vs. UniProt/SwissProt
Match: sp|P57724|PCBP4_MOUSE (Poly(rC)-binding protein 4 OS=Mus musculus OX=10090 GN=Pcbp4 PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 1.046e-46 Identity = 115/342 (33.63%), Postives = 178/342 (52.05%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQT 1819 L++R+LM GKEVGSIIGK+G+ +K+ RE+S ARI IS+G+ PERI TI+G++ + +A+ +I K + D S P+++R+++ A Q +++G G +IK+++E T A + + L S+ER +T+SG D++ IL C +L PK G+ I + ++SL T L ++ ++ Q Y P + KLQ H +P S + + + Q EF V N++IGC+IGR GS I+EIR +SGA IKI N +G ER ++I GS S+ AQ LI + L+ K T Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAI---------ILCVRQICAVILESPPK-------GATIP--------------YHPSLSLGTVLL--------SANQGFSVQGQYGAVTPAEV--TKLQQLSGHAVPFASPSVVPGMDPSTQTSSQ----EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKST 315
BLAST of Poly(RC)-binding protein 3 vs. TrEMBL
Match: A0A1I8GAN3 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.536e-65 Identity = 149/373 (39.95%), Postives = 215/373 (57.64%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDK--------------SMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYT-------DVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNII-------KEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKL 1828 L+IR+LMSGKEVGSIIG++GDN+K++REES ARINISDG+ PERIVT++GT+ QIH A ++C+KFE+DF + + K S + + P+++R+L+ A Q +I+G GG +IK+++ELT A+I E L SSER +T+SGT+ ++A CI ++C ILL+ +PY PK + T V SA A + P M S P +P S + + P P + G + L + +L T + Q +E + N++IGCIIGRGG+ INEIR +SGAQIKISN EDG +ERK++I G+ D++ AQ LI++S+ L+K L L Sbjct: 125 LTIRMLMSGKEVGSIIGRKGDNVKRYREESGARINISDGSCPERIVTVTGTAEQIHAAFAMMCQKFEDDFTQSIHKATAAAAANSAQPAGSDDVTCPPVTLRLLVAATQCGSIIGKGGCKIKEIRELTGASIQVASEALPNSSERTVTISGTARAIAKCIKQLCHILLDSPAKGATVPYRPKPVMLTTPIPQLNGVPSAAAAAAAAAAAAAAGPLMQPPM-----SGPPIPFMPEMSKAVPVSSVGLPFTSPLTGDALLANGCLPAASLALGHPALAGPGLTPARSHQGPAPPAPTNTQELVIPNDLIGCIIGRGGTKINEIRQLSGAQIKISNCEDGAKERKVTITGTPDTISAAQYLISASIDLHKHLLAL 492
BLAST of Poly(RC)-binding protein 3 vs. TrEMBL
Match: A0A1I8J6A4 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 3.419e-64 Identity = 142/379 (37.47%), Postives = 211/379 (55.67%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDK--------------SMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTD-------------VGSAIAINTCNTSNKMISPTFSDN----MSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPV---KLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKL 1828 L+IR+LMSGKEVGSIIG++GDN+K++REES ARINISDG+ PERIVT++GT+ QIH A ++C+KFE+DF + + K S + + P+++R+L+ A Q +I+G GG +IK+++ELT A+I E L SSER +T+SGT+ ++A CI ++ C +L H Y D ++ P S M + ++P+ + ++S D + P + + L GP P S+ + TN +E + N++IGCIIGRGG+ INEIR +SGAQIKISN EDG +ERK++I G+ D++ AQ LI++S+ L+K L L Sbjct: 26 LTIRMLMSGKEVGSIIGRKGDNVKRYREESGARINISDGSCPERIVTVTGTAEQIHAAFAMMCQKFEDDFTQSIHKATAAAAANSAQPAGSDDVTCPPVTLRLLVAATQCGSIIGKGGCKIKEIRELTGASIQVASEALPNSSERTVTISGTARAIAKCIKQL---------CHILLDAQAGHAHYADSPAQRCALRRSRSSCCRRGRCAAAARRPLMQPPMSGPPIPFMPEMSKAVPVSSVGLPFTSPLTGDALLANGCLPAASLALGHPALAGP--GLTPARSHQGPAPPAPTN-------TQELVIPNDLIGCIIGRGGTKINEIRQLSGAQIKISNCEDGAKERKVTITGTPDTISAAQYLISASIDLHKHLLAL 386
BLAST of Poly(RC)-binding protein 3 vs. TrEMBL
Match: A0A267EEB3 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig015157g1 PE=4 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 9.293e-63 Identity = 146/374 (39.04%), Postives = 215/374 (57.49%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDK--------------SMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYT-------DVGSAIAINTCNTSNKMISPTFSDNMSLA--------TNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPV---KLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQT 1819 L+IR+LMSGKEVGSIIG++GDN+K++REES ARINISDG+ PERIVT++GT+ QIH A ++C+KFE+DF + + K S + + P+++R+L+ A Q +I+G GG +IK+++ELT A+I E L SSER +T+SGT+ ++A CI ++C ILL+ +PY PK + T V SA A + P MS + ++P+ + ++S D + P + + L GP P S+ + TN +E + N++IGCIIGRGG+ INEIR +SGAQIKISN EDG +ERK++I G+ D++ AQ LI++ K + Sbjct: 93 LTIRMLMSGKEVGSIIGRKGDNVKRYREESGARINISDGSCPERIVTVTGTAEQIHSAFAMMCQKFEDDFTQSIHKATAAAAANSAQPAGSDDVTCPPVTLRLLVAATQCGSIIGKGGCKIKEIRELTGASIQVASEALPNSSERTVTISGTARAIAKCIKQLCHILLDSPAKGATVPYRPKPVMLTTPIPQLNGVPSAAAAAAAAAAAAAAGPLMQPPMSGPPIAFMPEMSKAVPVSSVGLPFTSPLTGDALLANGCLPAASLALGHPALAGP--GLTPARSHQGPAPPAPTN-------TQELVIPNDLIGCIIGRGGTKINEIRQLSGAQIKISNCEDGAKERKVTITGTPDTISAAQYLISARCHRQKSS 457
BLAST of Poly(RC)-binding protein 3 vs. TrEMBL
Match: A0A267G057 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig015157g2 PE=4 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 1.439e-62 Identity = 143/361 (39.61%), Postives = 207/361 (57.34%), Query Frame = 2 Query: 797 SIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDK--------------SMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYT-------DVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNII-------KEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINS 1795 +IR+LMSGKEVGSIIG++GDN+K++REES ARINISDG+ PERIVT++GT+ QIH A ++C+KFE+DF + + K S + + P+++R+L+ A Q +I+G GG +IK+++ELT A+I E L SSER +T+SGT+ ++A CI ++C ILL+ +PY PK + T V SA A + P M S P +P S + + P P + G + L + +L T + Q +E + N++IGCIIGRGG+ INEIR +SGAQIKISN EDG +ERK++I G+ D++ AQ LI++ Sbjct: 94 TIRMLMSGKEVGSIIGRKGDNVKRYREESGARINISDGSCPERIVTVTGTAEQIHAAFAMMCQKFEDDFTQSIHKATAAAAANSAQPAGSDDVTCPPVTLRLLVAATQCGSIIGKGGCKIKEIRELTGASIQVASEALPNSSERTVTISGTARAIAKCIKQLCHILLDSPAKGATVPYRPKPVMLTTPIPQLNGVPSAAAAAAAAAAAAAAGPLMQPPM-----SGPPIPFMPEMSKAVPVSSVGLPFTSPLTGDALLANGCLPAASLALGHPALAGPGLTPARSHQGPAPPAPTNTQELVIPNDLIGCIIGRGGTKINEIRQLSGAQIKISNCEDGAKERKVTITGTPDTISAAQYLISA 449
BLAST of Poly(RC)-binding protein 3 vs. TrEMBL
Match: A0A267EG34 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig007655g1 PE=4 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 2.907e-62 Identity = 142/362 (39.23%), Postives = 209/362 (57.73%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDK--------------SMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYT-------DVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNII-------KEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINS 1795 L+IR+LMSGKEVGSIIG++GDN+K++REES ARINISDG+ PERIVT++GT+ QIH A ++C+KFE+DF + + K S + + P+++R+L+ A Q +I+G GG +IK+++ELT A+I E L SSER +T+SGT+ ++A CI ++C ILL+ +PY PK + T V SA A + + + + S P +P S + + P P + G + L + +L T + Q +E + N++IGCIIGRGG+ INEIR +SGAQIKISN EDG +ERK++I G+ D++ AQ LI++ Sbjct: 93 LTIRMLMSGKEVGSIIGRKGDNVKRYREESGARINISDGSCPERIVTVTGTAEQIHAAFAMMCQKFEDDFTQSIHKATAAAAANSAQPAGSDDVTCPPVTLRLLVAATQCGSIIGKGGCKIKEIRELTGASIQVASEALPNSSERTVTISGTARAIAKCIKQLCHILLDSPAKGATVPYRPKPVMLTTPIPQLNGVPSAAAAAAAAAAAAAAAAAAAGPLMQPPMSGPPIPFMPEMSKAVPVSSVGLPFTSPLTGDALLANGCLPAASLALGHPALAGPGLTPARSHQGPAPPAPTNTQELVIPNDLIGCIIGRGGTKINEIRQLSGAQIKISNCEDGAKERKVTITGTPDTISAAQYLISA 454
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Cavefish
Match: pcbp3 (poly(rC)-binding protein 3 [Source:NCBI gene;Acc:103036377]) HSP 1 Score: 196.052 bits (497), Expect = 1.306e-55 Identity = 128/339 (37.76%), Postives = 192/339 (56.64%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPK--HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQ 1804 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT +++ C+ +IC ++LE +PY PK P G + + S +S + L LP +Q Y+ + DQ++ P G + P L D+ +ST E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ + Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESAARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQVRADPLAASAANLS------LLLQHQPLPAYTIQGQYAIP-HPDQLTKLHQLAMQQTPFTPLGQTTPAFPGL--DASPPAST----------HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARFR 335 HSP 2 Score: 52.373 bits (124), Expect = 1.070e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 90 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQIC 165
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Cavefish
Match: pcbp2 (poly(rC) binding protein 2 [Source:NCBI gene;Acc:103045736]) HSP 1 Score: 186.808 bits (473), Expect = 1.173e-52 Identity = 124/336 (36.90%), Postives = 187/336 (55.65%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S +S P+++RI++ A Q +++G GG +IK+++E T A + + L S+ER +T++GT S+ C+ +IC ++LE +PY PK GS + F+ + A +P ++ Q S P+PL P QG F + + T +H E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ A+ LIN+ L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPK-----PSGSPV--------------IFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS-----PFPLAPSS-QG----FTAGMDAS----AQTGSH--------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGSPASISLAEYLINARL 308
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Cavefish
Match: ENSAMXT00000036233.1 (poly(rC)-binding protein 2-like [Source:NCBI gene;Acc:103032686]) HSP 1 Score: 178.718 bits (452), Expect = 8.646e-50 Identity = 123/336 (36.61%), Postives = 186/336 (55.36%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM KEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S SS P+++RI++ A Q +++G GG +IK+++ELT A + + L S+ER +T++GT S+ C+ +IC ++LE +PY PK GS + F+ + A +P ++ Q S P+ IP SN ++T + Q + E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ A+ LIN+ L Sbjct: 14 LTIRLLMHSKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIDKLEEDISSSISNSPGSSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRELTGAQVQVAGDMLPNSTERAITIAGTIQSIIECVKQICVVMLESPPKGVTIPYRPK-----PSGSPV--------------IFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS-----PFQQIP--------------SNQGF--TTTMDAAAQTS--HEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSSDRQVTITGSAASISLAEYLINARL 307
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Cavefish
Match: ENSAMXT00000043675.1 (poly(rC)-binding protein 2-like [Source:NCBI gene;Acc:103032686]) HSP 1 Score: 179.874 bits (455), Expect = 6.687e-49 Identity = 119/334 (35.63%), Postives = 181/334 (54.19%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINS 1795 L+IR+LM KEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S SS P+++RI++ A Q +++G GG +IK+++ELT A + + L S+ER +T++GT S+ C+ +IC ++LE +PY PK + + + + P + LA P Q I S+ +T M ++ T+H E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ A+ LIN+ Sbjct: 14 LTIRLLMHSKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIDKLEEDISSSISNSPGSSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRELTGAQVQVAGDMLPNSTERAITIAGTIQSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQ---SPFQQIPSNQGFTTTMD-------------------------------AAAQTSH--------EMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSSDRQVTITGSAASISLAEYLINA 305
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Cavefish
Match: ENSAMXT00000017359.2 (poly(rC)-binding protein 2-like [Source:NCBI gene;Acc:103032686]) HSP 1 Score: 174.866 bits (442), Expect = 1.501e-48 Identity = 123/347 (35.45%), Postives = 186/347 (53.60%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPIL--PLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKL 1828 L+IR+LM KEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I K E D + + S SS P+++RI++ A Q +++G GG +IK+++ELT A + + L S+ER +T++GT S+ C+ +IC ++LE +PY PK GS + F+ + L + P Q I S+ +T M ++ T+H E + N++IGCIIGR G+ INEIR +SGAQIKI+N +G +R+++I GS S+ A+ LIN+S + L+L Sbjct: 14 LTIRLLMHSKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIDKLEEDISSSISNSPGSSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRELTGAQVQVAGDMLPNSTERAITIAGTIQSIIECVKQICVVMLESPPKGVTIPYRPK-----PSGSPV--------------IFAGGQLTKLHQLAMQQSPFQQIPSNQGFTTTMDA-------------------------------AAQTSH--------EMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSSDRQVTITGSAASISLAEYLINASSESVGGVLEL 302
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005114.1 (pep scaffold:Pmarinus_7.0:GL476545:177182:183416:1 gene:ENSPMAG00000004551.1 transcript:ENSPMAT00000005114.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 174.481 bits (441), Expect = 1.117e-48 Identity = 120/336 (35.71%), Postives = 179/336 (53.27%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISH--FIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINS 1795 LSIR+LM KEVGSIIGK+G+ +K+ REES ARINISD N PERIVT++G I A LI K E D L + S P+++R+++ A Q +++G G +I++L+E T A + + L S+ER +T+SGT D++ C+ +IC +++E +PY PK + ++S P++ YT Q Y I P P + Q + H F P S +++ + Q E + N +IGCIIG+ G+ INEIR +SGAQIKI+++ DG +R++ I GS ++ AQ LIN+ Sbjct: 16 LSIRLLMHSKEVGSIIGKKGEFVKRVREESGARINISDANCPERIVTVTGPMESIFLAFALITHKLEEDMGSTLSGGVMMSRPPVTLRLVVPASQCGSLIGKSGNKIQELRESTGAQVQVAGDLLPNSTERAVTISGTPDAIVQCVRQICVLMMESPPKGATIPYRPKPV--------------------------------SSSAPVI----FAGGQAYTIQGQYAI--PNPDLTKLHQLAMQHTPFTPINQASSGYQATPGVDASAQMSTHEISIPNNLIGCIIGKQGTKINEIRQMSGAQIKIASAIDGATDRQVIITGSPANISLAQYLINA 313
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005105.1 (pep scaffold:Pmarinus_7.0:GL501087:1205:15413:-1 gene:ENSPMAG00000004637.1 transcript:ENSPMAT00000005105.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 132.88 bits (333), Expect = 7.703e-36 Identity = 75/168 (44.64%), Postives = 112/168 (66.67%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPK 1297 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+G+ PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SG +++ C+ +IC I+LE +PY PK Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGQTDAIFKAFSMITNKFEEDINASMANSAVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTVSGAPEAIIQCVKQICVIMLESPPKGATIPYRPK 181
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Sea Lamprey
Match: zgc:110045 (zgc:110045 [Source:ZFIN;Acc:ZDB-GENE-050706-149]) HSP 1 Score: 103.605 bits (257), Expect = 1.959e-26 Identity = 51/112 (45.54%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKE 1129 L+IR+LM KEVGSIIGK+GD +K+ R+ES +RINISDGN PERIVT++G + I A ++ K E D + S+ + P+++R+++ A Q +++G G +IK+L+E Sbjct: 17 LTIRLLMHSKEVGSIIGKKGDFVKRIRDESGSRINISDGNCPERIVTVTGPTEAIFRAFTMMTHKLEEDMISTMANSVVMNRPPVTLRLVVPASQCGSLIGKSGNKIKELRE 128
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001813.1 (pep scaffold:Pmarinus_7.0:GL484105:1100:13677:-1 gene:ENSPMAG00000001644.1 transcript:ENSPMAT00000001813.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 53.9138 bits (128), Expect = 3.322e-8 Identity = 26/76 (34.21%), Postives = 48/76 (63.16%), Query Frame = 2 Query: 1586 TQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYK 1813 ++ + +EF V + M+G IIGRGG I++++ SG +I+IS GK ER S+ G+ ++++ A+ LI ++ + Sbjct: 96 SRSQVTEEFKVPDRMVGLIIGRGGENISKLQNESGCKIQISPDSGGKPERPCSLTGTPEAIRDAKRLIEQIIERAR 171
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Sea Lamprey
Match: NOVA1 (NOVA alternative splicing regulator 1 [Source:HGNC Symbol;Acc:HGNC:7886]) HSP 1 Score: 49.2914 bits (116), Expect = 2.620e-6 Identity = 26/76 (34.21%), Postives = 45/76 (59.21%), Query Frame = 2 Query: 1607 EFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSED---GKQERKISICGSYDSVQTAQILINSSLQLYKQTLK 1825 E V ++G I+G+GG T+ E + ++GA+I+IS + G + RK++I G+ S AQ LI + Y+Q ++ Sbjct: 303 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGTTASTHAAQYLITQRIT-YEQGVR 377 HSP 2 Score: 47.3654 bits (111), Expect = 8.728e-6 Identity = 38/129 (29.46%), Postives = 62/129 (48.06%), Query Frame = 2 Query: 1607 EFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDG--KQERKISICGSYDSVQTAQILINSSLQLYKQTLKLKSVMKSN--NPLVLSNPHLIPPTPQITQMLPQWSVNSNFLTQPT-QSIYTFPS 1978 + V N G IIG+GG+T+ I SG+ +++S +G QER I++ G + Q A LI +Q Q+ ++ N P+ SNP P +MLP ++ + L Q ++ FP+ Sbjct: 58 KILVPNSTAGLIIGKGGATVKAIMEASGSWVQLSQKPEGINLQERVITVSGEAEQNQKAIELILQKIQEDPQSSSCLNISYCNLSGPVANSNPTG-SPYANSAEMLPGSAMAAGLLGQTNLATVAAFPT 185
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Yeast
Match: PBP2 (RNA binding protein; has similarity to mammalian heterogeneous nuclear RNP K protein, involved in the regulation of telomere position effect and telomere length; relative distribution to the nucleus increases upon DNA replication stress [Source:SGD;Acc:S000000437]) HSP 1 Score: 98.5969 bits (244), Expect = 2.579e-22 Identity = 88/377 (23.34%), Postives = 176/377 (46.68%), Query Frame = 2 Query: 758 ESTNPKNSSENC---LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG--NSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVA------NXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTC--------NTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKLK 1831 S N +S +N + +R+L K I+G +G I + + E+ ARINIS+ PERIV + GT + A +I + + + + +SI +L+ I+G G R++++++L+ A + L S++R+LT++G D++ + L ++ N + Y P + + NT + S+K++S + N+ +++ L + Q Y+++ + ++ NF P + V L GP+ I + NH + +E F+D + +G +IG+ G IN ++ +G I I + +G ER+++I G++ + Q A +LI++ +++ + + K Sbjct: 52 HSDNDHDSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDDVAKAYGMIVRALLEEHGNEDN----GEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHS-QPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQ--YTTASVANATAFQPNFVIPNVTV-LDGPV------------ISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRGTFMASQAAIMLISNKIEIDRSNAERK 408
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Nematostella
Match: EDO42485 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S1C6]) HSP 1 Score: 126.716 bits (317), Expect = 7.270e-32 Identity = 68/170 (40.00%), Postives = 115/170 (67.65%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHL 1303 L ++++M GK++GSIIGK G IK+FR+ES A INISDG++PERIV+++GT + A LI +K E++ S ++ P+++R+++ Q +I+G GG +IK+++E++ A+++ EFL SSER +TLSGT +++ CI +C +++E + +PY+P L Sbjct: 27 LVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDGSTPERIVSVTGTKDAVVTAFALIGQKLEDELK---SNSKSNTTPPVTLRLIVPGSQCGSIIGKGGAKIKEIREVSGASVVVAGEFLPGSSERAVTLSGTPEALETCIDLLCGVMIEFPPRGHPMPYTPHKL 193 HSP 2 Score: 56.6102 bits (135), Expect = 1.655e-8 Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 2 Query: 1631 IGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQ 1804 +G IIG+ GS I IR +SGA IKI +SE+G +R++ I G+ ++V AQ LIN+ L+ Sbjct: 258 VGSIIGQKGSYITGIRQMSGASIKIGDSENGDDKREVLITGTAEAVGLAQFLINARLR 315 HSP 3 Score: 51.9878 bits (123), Expect = 5.492e-7 Identity = 33/93 (35.48%), Postives = 50/93 (53.76%), Query Frame = 2 Query: 713 INYNIVSELKSNPIIESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 I + ELKSN +T P +++R+++ G + GSIIGK G IK+ RE S A + ++ S ER VT+SGT + + L+C Sbjct: 88 IGQKLEDELKSNSKSNTTPP-------VTLRLIVPGSQCGSIIGKGGAKIKEIREVSGASVVVAGEFLPGSSERAVTLSGTPEALETCIDLLC 173
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Nematostella
Match: EDO37243 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SGC0]) HSP 1 Score: 72.0182 bits (175), Expect = 3.373e-13 Identity = 45/143 (31.47%), Postives = 82/143 (57.34%), Query Frame = 2 Query: 797 SIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQ--IHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSV 1219 ++RIL+ K+ G IIGK G NI++ R E A +N+ D NS ER++TI+ RQ + +++ K E + I++L+Q Q +I+G G +IK+++E + A + + L S+ER++T+SG+++++ Sbjct: 54 TLRILIQSKDAGGIIGKGGTNIRRLRTEYNAVVNVPDTNSNERVLTIT-APRQSALDILAEVVPKIGEVQYGH-------------EIQMLVQRSQVGSIIGRAGYKIKEIREGSGANVKVFADCLPNSTERVVTMSGSAETI 182
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Nematostella
Match: EDO35692 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SKT2]) HSP 1 Score: 65.4698 bits (158), Expect = 3.149e-11 Identity = 89/357 (24.93%), Postives = 152/357 (42.58%), Query Frame = 2 Query: 800 IRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGN-----SPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESS---ALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGM-EFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYV---LPYSPKH-----LPYTDVGSAIAINTCNTSNKMISPTFSDNMSL-ATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSST-TNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSED---GKQERKISICGSYDSVQTAQILINSSLQ 1804 ++IL+ GSIIGK G NI + ++ + ARI +S N + ERI I G I + + K + + + SM S ++I++ I+G G IK + E T A I + + + ER++ + G+ + V + C + + P+H + Y+ + ++ A +T+ ++ FS + A + L L L N ++ T + I L+ NL+N +ST T+ Q + E V +E+IG I+G+GG TI E SGA+I++S + G RK+ I G + Q A L+ +Q Sbjct: 48 LKILVPNYAAGSIIGKGGQNIAQVQQTTGARIKLSPNNQYYPGTQERIGLIMGEVENIVQMLDFVIDKIRQE-PQGIKASMSISFDRERAKQMKIIVPNSTAGMIIGKAGSAIKSISEQTGARIQISQKDAESVAGERIVCVGGSQEQV-------------TAACVIITSKVQEDPEHALNNNIMYSGLTTSRA---GHTNGQLAGSAFSSGLPFSALSGLSALGLTNTATAQNTTTSATNHILAQAALMSGS----------NLNNPMAPPTSTATSSSIQSSATLEITVPDELIGAILGKGGKTITEFMQYSGARIQVSQKGEFVPGTSNRKVVITGDVPAAQLAHFLVTQRIQ 377
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Medaka
Match: ENSORLT00000018033.2 (poly(rC)-binding protein 3 [Source:NCBI gene;Acc:101159528]) HSP 1 Score: 200.29 bits (508), Expect = 3.139e-56 Identity = 128/344 (37.21%), Postives = 195/344 (56.69%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLK 1825 L++R+LM GKEVGSIIGK+G+ +KK REES ARINIS+G+SPERIVTI+G + I A +I +KFE D + S +S P+++R++ Q +++G GG +IK+++E T A + + L S+ER +T+SGT ++ C+ IC ++LE +PY PK LP ++ +++P S + +P Q ++ T + IP+ G + P L DS +ST +E + N++IGCIIGR GS INEIR VSGA IKI+++ DG R+++I GS S+ AQ LIN+SL++ + T++ Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSPERIVTITGPTEGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPDSTERAVTISGTPQAITQCVRHICSVMLESPPKGATIPYRPKILPA-------------GAHAVLAPQHSAHAFA-------IPGQYAFAHQDLTKLHQLAMQH----IPLPSLGQSNPTFPGL--DSSASTST----------QELAIPNDLIGCIIGRQGSKINEIRQVSGAHIKIASATDGSAVRQVTITGSPASISIAQYLINASLEMARYTMQ 324 HSP 2 Score: 53.1434 bits (126), Expect = 7.170e-7 Identity = 28/76 (36.84%), Postives = 47/76 (61.84%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 TN +S+ +++R++ G + GS+IGK G IK+ RE + A++ ++ +S ER VTISGT + I ++ IC Sbjct: 91 TNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPDSTERAVTISGTPQAITQCVRHIC 166
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Medaka
Match: PCBP2 (poly(rC) binding protein 2 [Source:NCBI gene;Acc:101160803]) HSP 1 Score: 194.126 bits (492), Expect = 6.893e-54 Identity = 124/340 (36.47%), Postives = 188/340 (55.29%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYK 1813 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I +K E D + + S +S P+++RI++ A Q +++G GG +IK+++E T A + + L S+ER +T++GT S+ C+ +IC ++LE +PY PK GS + F+ + A +P ++ Q S P+P+ P SN T + Q E + N++IGCIIGR G+ INEIR +SGAQIKI+N DG +R+++I GS S+ A+ LIN+S++ K Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPK-----PSGSPV--------------IFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS-----PFPIAP--------------SNQGF----TGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVDGSTDRQVTITGSPASISLAEYLINASVECSK 311 HSP 2 Score: 51.9878 bits (123), Expect = 1.934e-6 Identity = 28/76 (36.84%), Postives = 47/76 (61.84%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 TN +S+ +++RI++ + GS+IGK G IK+ RE + A++ ++ NS ER +TI+GT + I +K IC Sbjct: 88 TNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECVKQIC 163
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Medaka
Match: PCBP2 (poly(rC) binding protein 2 [Source:NCBI gene;Acc:101160803]) HSP 1 Score: 189.119 bits (479), Expect = 1.520e-53 Identity = 123/336 (36.61%), Postives = 185/336 (55.06%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+++KK REES ARINIS+GN PERI+T++G + I A +I +K E D + + S +S P+++RI++ A Q +++G GG +IK+++E T A + + L S+ER +T++GT S+ C+ +IC ++LE +PY PK GS + F+ + A +P ++ Q S P+P+ P SN T + Q E + N++IGCIIGR G+ INEIR +SGAQIKI+N DG +R+++I GS S+ A+ LIN+ L Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPK-----PSGSPV--------------IFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS-----PFPIAP--------------SNQGF----TGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVDGSTDRQVTITGSPASISLAEYLINARL 307 HSP 2 Score: 51.2174 bits (121), Expect = 1.958e-6 Identity = 30/89 (33.71%), Postives = 53/89 (59.55%), Query Frame = 2 Query: 725 IVSELKSNPIIESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 I+ +L+ + TN +S+ +++RI++ + GS+IGK G IK+ RE + A++ ++ NS ER +TI+GT + I +K IC Sbjct: 75 IIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECVKQIC 163
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Medaka
Match: pcbp3 (poly(rC)-binding protein 3 [Source:NCBI gene;Acc:101158397]) HSP 1 Score: 187.193 bits (474), Expect = 8.240e-53 Identity = 124/336 (36.90%), Postives = 183/336 (54.46%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSL 1801 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT +++ C+ +I C +L PK G+ I S +I FS + +P + DQ++ P G + P L D+ +ST E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ L Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQI---------CVVMLESPPK-------GATIPYRPKPASTPVI---FSGGQAYTIQGQYAIP---------HPDQLTKLHQLAMQQTPFTPLGQTTPAFPGL--DAAPPAST----------HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARL 311 HSP 2 Score: 51.6026 bits (122), Expect = 1.515e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 90 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQIC 165
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Medaka
Match: pcbp3 (poly(rC)-binding protein 3 [Source:NCBI gene;Acc:101158397]) HSP 1 Score: 187.193 bits (474), Expect = 9.999e-53 Identity = 123/337 (36.50%), Postives = 183/337 (54.30%), Query Frame = 2 Query: 794 LSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQ 1804 L+IR+LM GKEVGSIIGK+G+ +KK REES ARINIS+GN PERIVTI+G + I A +I KFE D + S +S P+++R+++ A Q +++G GG +IK+++E T A + + L S+ER +T+SGT +++ C+ +I C +L PK G+ I S +I FS + +P + DQ++ P G + P L D+ +ST E + N++IGCIIGR G+ INEIR +SGAQIKI+N+ +G ER+I+I G+ ++ AQ LIN+ + Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQI---------CVVMLESPPK-------GATIPYRPKPASTPVI---FSGGQAYTIQGQYAIP---------HPDQLTKLHQLAMQQTPFTPLGQTTPAFPGL--DAAPPAST----------HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARFR 312 HSP 2 Score: 51.9878 bits (123), Expect = 1.183e-6 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 764 TNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDG---NSPERIVTISGTSRQIHYAMKLIC 982 +N +S+ +++R+++ + GS+IGK G IK+ RE + A++ ++ NS ER VTISGT I +K IC Sbjct: 90 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQIC 165
BLAST of Poly(RC)-binding protein 3 vs. Planmine SMEST
Match: SMESG000005644.1 (SMESG000005644.1) HSP 1 Score: 1047.73 bits (2708), Expect = 0.000e+0 Identity = 536/554 (96.75%), Postives = 537/554 (96.93%), Query Frame = 2 Query: 530 MSTPGLINQYPTIMSGIQHNYSLNNLQFPQNGQLSHPIALTGLPSLPFINTCDFNAQLMSPINYNIVSELKSNPIIESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKE----------------LTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKLKSVMKSNNPLVLSNPHLIPPTPQITQMLPQWSVNSNFLTQPTQSIYTFPSTELFDINQMLVNFNQFTNSTFTGCTVPSTVDTIDRSLTKMKASQINIDGNKHKTN 2143 MSTPGLINQYPTIMSGIQHNYSLNNLQFPQNGQLSHPIALTGLPSLPFINTCDFNAQLMSPINYNIVSELKSNPIIESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKK+K LTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKILLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKLKSVMKSNNPLVLSNPHLIPPTPQITQMLPQWSVNSNFLTQPTQSIYTFPSTELFDINQMLVNFNQFTNSTFTGCTVPSTVDTIDRSLTKMKASQINIDGNKHKTN Sbjct: 1 MSTPGLINQYPTIMSGIQHNYSLNNLQFPQNGQLSHPIALTGLPSLPFINTCDFNAQLMSPINYNIVSELKSNPIIESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKIKRGKFYYAVFFGNILFLLLTDATILFGMEFLTASSERLLTLSGTSDSVANCILEICKILLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKLKSVMKSNNPLVLSNPHLIPPTPQITQMLPQWSVNSNFLTQPTQSIYTFPSTELFDINQMLVNFNQFTNSTFTGCTVPSTVDTIDRSLTKMKASQINIDGNKHKTN 554
BLAST of Poly(RC)-binding protein 3 vs. Planmine SMEST
Match: SMESG000005644.1 (SMESG000005644.1) HSP 1 Score: 984.556 bits (2544), Expect = 0.000e+0 Identity = 498/538 (92.57%), Postives = 505/538 (93.87%), Query Frame = 2 Query: 530 MSTPGLINQYPTIMSGIQHNYSLNNLQFPQNGQLSHPIALTGLPSLPFINTCDFNAQLMSPINYNIVSELKSNPIIESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKLKSVMKSNNPLVLSNPHLIPPTPQITQMLPQWSVNSNFLTQPTQSIYTFPSTELFDINQMLVNFNQFTNSTFTGCTVPSTVDTIDRSLTKMKASQINIDGNKHKTN 2143 MSTPGLINQYPTIMSGIQHNYSLNNLQFPQNGQLSHPIALTGLPSLPFINTCDFNAQLMSPINYNIVSELKSNPIIESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKK+K + +++ D++ ILLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKLKSVMKSNNPLVLSNPHLIPPTPQITQMLPQWSVNSNFLTQPTQSIYTFPSTELFDINQMLVNFNQFTNSTFTGCTVPSTVDTIDRSLTKMKASQINIDGNKHKTN Sbjct: 1 MSTPGLINQYPTIMSGIQHNYSLNNLQFPQNGQLSHPIALTGLPSLPFINTCDFNAQLMSPINYNIVSELKSNPIIESTNPKNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSMESSALPLSIRILMQALQYENIVGNGGVRIKKIKRVNGRNYFIWNGIPNGFFRKII------DTICK-------ILLEISNCPYVLPYSPKHLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKLKSVMKSNNPLVLSNPHLIPPTPQITQMLPQWSVNSNFLTQPTQSIYTFPSTELFDINQMLVNFNQFTNSTFTGCTVPSTVDTIDRSLTKMKASQINIDGNKHKTN 525
BLAST of Poly(RC)-binding protein 3 vs. Planmine SMEST
Match: SMESG000028069.1 (SMESG000028069.1) HSP 1 Score: 227.254 bits (578), Expect = 6.478e-66 Identity = 163/420 (38.81%), Postives = 240/420 (57.14%), Query Frame = 2 Query: 638 PIALTGLPSLPFINTCDFNAQLMSPINYN-IVSELKSNPIIESTNP--------KNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLD---KSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKH------------------LPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQL 1807 P + + LP DFN S NY V ++S+P +S NP +N ++IR++MSGKEVGSIIGK+GDNIKK REES ARINISDG+ PERIVT++GT +I+ A ++C+KFE+D+ ++ K+ + + P+++R+L+ A Q +I+G GG +IK ++E+ A+I E L SSER +T+SGT+++VA CI EI IL E +PY PK P+ + + SPT + + + ILP QN++ +Y + Y + FP P +P+ P H + S S SS+ ++KEF + N+MIGCIIGRGGSTINEIR +SGAQIKIS +E+ +R+I+I G+ +S+ TA++LIN+ L + Sbjct: 38 PEGYSHIQQLPQFAVNDFNVPFFSFQNYQPFVMSMESDPS-QSINPPSPGKCLTQNHIAQMVTIRMIMSGKEVGSIIGKKGDNIKKIREESAARINISDGSCPERIVTVTGTVDKIYSAFLMMCQKFEDDYIGCINSNKKNADVTCPPVTLRLLVPATQCGSIIGKGGCKIKDIREMCGASIQVASELLPNSSERSVTVSGTANAVARCIQEISTILQETPLRCNTIPYKPKSSYSGIHTPLPSPNNMPPLFPFVGGNHEMMKHMDRYQQNNSSPTIALYPVSQSATGQILP-QNMF-PAYVPEHNPYHV-FP-PALPI---WPRQHPPLSYSVKSDSLSSSQTSSVGSQLVKEFSITNDMIGCIIGRGGSTINEIRTLSGAQIKISYTEEKSTDRQITISGTPESINTAEMLINAKLNI 449
BLAST of Poly(RC)-binding protein 3 vs. Planmine SMEST
Match: SMESG000028069.1 (SMESG000028069.1) HSP 1 Score: 228.024 bits (580), Expect = 1.805e-65 Identity = 168/443 (37.92%), Postives = 251/443 (56.66%), Query Frame = 2 Query: 638 PIALTGLPSLPFINTCDFNAQLMSPINYN-IVSELKSNPIIESTNP--------KNSSENCLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLD---KSMESSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLTASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPKH------------------LPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQTLKL-KSVMKSNNPLVLSNP 1873 P + + LP DFN S NY V ++S+P +S NP +N ++IR++MSGKEVGSIIGK+GDNIKK REES ARINISDG+ PERIVT++GT +I+ A ++C+KFE+D+ ++ K+ + + P+++R+L+ A Q +I+G GG +IK ++E+ A+I E L SSER +T+SGT+++VA CI EI IL E +PY PK P+ + + SPT + + + ILP QN++ +Y + Y + FP P +P+ P H + S S SS+ ++KEF + N+MIGCIIGRGGSTINEIR +SGAQIKIS +E+ +R+I+I G+ +S+ TA++LIN++++ + ++ K+ S NP V P Sbjct: 38 PEGYSHIQQLPQFAVNDFNVPFFSFQNYQPFVMSMESDPS-QSINPPSPGKCLTQNHIAQMVTIRMIMSGKEVGSIIGKKGDNIKKIREESAARINISDGSCPERIVTVTGTVDKIYSAFLMMCQKFEDDYIGCINSNKKNADVTCPPVTLRLLVPATQCGSIIGKGGCKIKDIREMCGASIQVASELLPNSSERSVTVSGTANAVARCIQEISTILQETPLRCNTIPYKPKSSYSGIHTPLPSPNNMPPLFPFVGGNHEMMKHMDRYQQNNSSPTIALYPVSQSATGQILP-QNMF-PAYVPEHNPYHV-FP-PALPI---WPRQHPPLSYSVKSDSLSSSQTSSVGSQLVKEFSITNDMIGCIIGRGGSTINEIRTLSGAQIKISYTEEKSTDRQITISGTPESINTAEMLINANIKSFMSSVTSNKTKPPSQNPSVDYQP 472
BLAST of Poly(RC)-binding protein 3 vs. Planmine SMEST
Match: SMESG000029221.1 (SMESG000029221.1) HSP 1 Score: 105.145 bits (261), Expect = 3.484e-24 Identity = 97/346 (28.03%), Postives = 162/346 (46.82%), Query Frame = 2 Query: 791 CLSIRILMSGKEVGSIIGKRGDNIKKFREESMARINISDGNSPERIVTISGTSRQIHYAMKLICKKFENDFAKPLDKSME--SSALPLSIRILMQALQYENIVGNGGVRIKKLKELTDATILFGMEFLT-ASSERLLTLSGTSDSVANXXXXXXXXXXXXSNCPYVLPYSPK-HLPYTDVGSAIAINTCNTSNKMISPTFSDNMSLATNSLPILPLQNIYSSSYYTDQMSYPINFPYPLIPVKLQGPISHFIPNLSNDSLIKSSTTNHFTQQNIIKEFFVDNEMIGCIIGRGGSTINEIRAVSGAQIKISNSEDGKQERKISICGSYDSVQTAQILINSSLQLYKQ 1816 C+ +R L+ K GS+IGK G+NI+ R MARINISD + PERI+++ I + +K E P S + +A + +R+L+ ++G GG RI L+E D +L + + S++R++ + G V +CI +I + C PK + + A A + + I P SL + + Q+ Y + +Y SYP N+ D+ + +TT++ Q++ I+E + ++++G IIG GGS I ++R SGA I IS+ + QER ++I G+ V+ A +IN L Y + Sbjct: 20 CIELRFLIPSKAAGSVIGKSGENIRNLRRLFMARINISDNSGPERILSLEADLDTILGILAQCLEKMEGCIPLPRAGSGDCNDNASNVDLRMLVNQSLVGALIGRGGGRINDLREKCDLRVLKVYQTVCPESTDRIVQMVGAIPLVIDCIGKIVDM------CKETPVREPKVNYDAQNYDHATANHYGGWAQSPIRPDNIATRSLGFSRPGFMKHQSTYKNEHY--DYSYPNNY-------------------REMDTSFR-NTTHYEDQESEIQEIRLPHKVVGAIIGPGGSRIQQVRMDSGAHITISSLDRNPQERVVTISGNTQDVKRAYNMINECLGKYGR 337 The following BLAST results are available for this feature:
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 3
BLAST of Poly(RC)-binding protein 3 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Poly(RC)-binding protein 3 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30017635 ID=SMED30017635|Name=Poly(RC)-binding protein 3|organism=Schmidtea mediterranea sexual|type=transcript|length=2421bpback to top protein sequence of SMED30017635-orf-1 >SMED30017635-orf-1 ID=SMED30017635-orf-1|Name=SMED30017635-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=558bp MSTPGLINQYPTIMSGIQHNYSLNNLQFPQNGQLSHPIALTGLPSLPFINback to top Annotated Terms
The following terms have been associated with this transcript:
|