RBBP4-1
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30017595 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 8
Homology
BLAST of RBBP4-1 vs. Ensembl Human
Match: RBBP4 (RB binding protein 4, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:9887]) HSP 1 Score: 175.252 bits (443), Expect = 4.439e-47 Identity = 95/233 (40.77%), Postives = 143/233 (61.37%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P+++G L + + TIC +DIS + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++++WD+ KIG++ D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 150 WNPNLSGHL-LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 377 HSP 2 Score: 108.997 bits (271), Expect = 1.293e-24 Identity = 64/169 (37.87%), Postives = 91/169 (53.85%), Query Frame = 1
Query: 118 TLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRL-------PLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNC--LLTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
L+WPS T QWLP + E D +I++++LGTH +E+N L+ A + N D Q + + S ++GK+ I +NH+G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D +C
Sbjct: 4 ALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPN----DDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTIC 168 HSP 3 Score: 56.225 bits (134), Expect = 2.226e-7 Identity = 46/196 (23.47%), Postives = 81/196 (41.33%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P I + +L++DY + + S P ++ H + LSW+P S LL+ D + LWD + K+V A +F +V V+W L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 87 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 270
BLAST of RBBP4-1 vs. Ensembl Human
Match: RBBP4 (RB binding protein 4, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:9887]) HSP 1 Score: 175.637 bits (444), Expect = 8.606e-47 Identity = 95/233 (40.77%), Postives = 143/233 (61.37%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P+++G L + + TIC +DIS + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++++WD+ KIG++ D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 184 WNPNLSGHL-LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 411 HSP 2 Score: 130.568 bits (327), Expect = 1.670e-31 Identity = 76/199 (38.19%), Postives = 107/199 (53.77%), Query Frame = 1
Query: 46 DDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRL-------PLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
DD +EER +IWK N P +Y+L L+WPS T QWLP + E D +I++++LGTH +E+N L+ A + N D Q + + S ++GK+ I +NH+G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D +C
Sbjct: 8 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPN----DDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTIC 202 HSP 3 Score: 55.8398 bits (133), Expect = 2.829e-7 Identity = 46/196 (23.47%), Postives = 81/196 (41.33%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P I + +L++DY + + S P ++ H + LSW+P S LL+ D + LWD + K+V A +F +V V+W L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 121 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 304
BLAST of RBBP4-1 vs. Ensembl Human
Match: RBBP4 (RB binding protein 4, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:9887]) HSP 1 Score: 175.252 bits (443), Expect = 9.583e-47 Identity = 95/233 (40.77%), Postives = 143/233 (61.37%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P+++G L + + TIC +DIS + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++++WD+ KIG++ D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 185 WNPNLSGHL-LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 412 HSP 2 Score: 130.568 bits (327), Expect = 1.620e-31 Identity = 76/199 (38.19%), Postives = 107/199 (53.77%), Query Frame = 1
Query: 46 DDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRL-------PLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
DD +EER +IWK N P +Y+L L+WPS T QWLP + E D +I++++LGTH +E+N L+ A + N D Q + + S ++GK+ I +NH+G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D +C
Sbjct: 9 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPN----DDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTIC 203 HSP 3 Score: 55.8398 bits (133), Expect = 2.962e-7 Identity = 46/196 (23.47%), Postives = 81/196 (41.33%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P I + +L++DY + + S P ++ H + LSW+P S LL+ D + LWD + K+V A +F +V V+W L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 305
BLAST of RBBP4-1 vs. Ensembl Human
Match: RBBP7 (RB binding protein 7, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:9890]) HSP 1 Score: 172.17 bits (435), Expect = 1.384e-45 Identity = 87/216 (40.28%), Postives = 132/216 (61.11%), Query Frame = 2
Query: 692 TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEA-SVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
T+C +DI+ + A+ I TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ +++V WSP ET+ S+G ++++WD+ KIG++ + D ED P EL IH GH ++D W+P + SV+EDN++ +WQ+ ++I+ DE
Sbjct: 200 TVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 411 HSP 2 Score: 128.642 bits (322), Expect = 7.178e-31 Identity = 76/197 (38.58%), Postives = 105/197 (53.30%), Query Frame = 1
Query: 40 MNDDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSN---EADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
M +DT+EER +IWK N P +Y+L L WPS T QWLP K E D+ ++ ++LGTH +E+N L+ A I N + +A + + + GK+ +NH+G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D VC
Sbjct: 6 MFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVC 202 HSP 3 Score: 57.3806 bits (137), Expect = 1.158e-7 Identity = 48/196 (24.49%), Postives = 84/196 (42.86%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEA----SSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P +I + +L++DY + A S P ++ H + LSW+ S LL+ D V LWD + K+V A +F ++V VAW L E+LF S K+ IWD P+ L H+ + ++ ++PY + +A+ + D V +W +++
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS---------NTTSKPSHLVDAHTAEVNCLS---FNPYSEFILATGSADKTVALWDLRN 304
BLAST of RBBP4-1 vs. Ensembl Human
Match: RBBP7 (RB binding protein 7, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:9890]) HSP 1 Score: 171.785 bits (434), Expect = 1.535e-45 Identity = 87/216 (40.28%), Postives = 132/216 (61.11%), Query Frame = 2
Query: 692 TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEA-SVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
T+C +DI+ + A+ I TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ +++V WSP ET+ S+G ++++WD+ KIG++ + D ED P EL IH GH ++D W+P + SV+EDN++ +WQ+ ++I+ DE
Sbjct: 191 TVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 402 HSP 2 Score: 129.413 bits (324), Expect = 3.506e-31 Identity = 78/194 (40.21%), Postives = 104/194 (53.61%), Query Frame = 1
Query: 40 MNDDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
M +DT+EER +IWK N P +Y+L L WPS T QWLP K E D+ ++ ++LGTH +E+N L+ A I N D Q + + S GK+ +NH+G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D VC
Sbjct: 6 MFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPN----DDAQFDASHCDSDK--GGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVC 193 HSP 3 Score: 56.9954 bits (136), Expect = 1.519e-7 Identity = 48/196 (24.49%), Postives = 84/196 (42.86%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEA----SSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P +I + +L++DY + A S P ++ H + LSW+ S LL+ D V LWD + K+V A +F ++V VAW L E+LF S K+ IWD P+ L H+ + ++ ++PY + +A+ + D V +W +++
Sbjct: 112 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS---------NTTSKPSHLVDAHTAEVNCLS---FNPYSEFILATGSADKTVALWDLRN 295
BLAST of RBBP4-1 vs. Ensembl Celegans
Match: unc-9 (Innexin unc-9 [Source:UniProtKB/Swiss-Prot;Acc:O01393]) HSP 1 Score: 130.954 bits (328), Expect = 1.244e-52 Identity = 67/153 (43.79%), Postives = 95/153 (62.09%), Query Frame = 3
Query: 2658 DLSDWLNYSCSTVILILFAMIISARQYIGKPISCWVPAEFTRSQEEYTESVCWVTSTYFLP-NSTISNDNERRNVTKLTYYQWVPFILIAQAALFYIPCLVWRMFNWQSGYQ-----DIRAISPLADLYQLSRPPLQYCPTSPASQ*HLQDQT 3098
D+ D LNY +T I+ +FA+++SA+QY+G PI CWVPA FT E+YTE+ CWV +TYFLP + I ++ R ++ YYQWVPF+L +A LFY+P +VWR+ +WQSG + S L DL +R LQ T+ H++ Q
Sbjct: 22 DIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNTYFLPLHDYIPHNYAERENRQIGYYQWVPFVLALEALLFYVPTIVWRLLSWQSGIHVQSLVQMACDSRLLDLESRNR-ALQTIATNVEEALHVKHQV 173 HSP 2 Score: 97.0561 bits (240), Expect = 1.244e-52 Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 3181 GNFLVGLYLFVKFLYSLNIFGQLILMNTYLGTNYTLYGIHLLLDISSGRSWQESGNFPRVTICDFTIHKLANTHKYTVQCVL 3426
G + LY+ VK LY++NI GQ+ L+NT+LG YG+ +L D+ +GR W+ESG+FPRVT+CDF + L N H++TVQCVL
Sbjct: 192 GAAVTFLYISVKILYTVNIVGQIFLLNTFLGNRSKWYGLQVLNDLMNGREWEESGHFPRVTLCDFEVKVLGNVHRHTVQCVL 273
BLAST of RBBP4-1 vs. Ensembl Celegans
Match: inx-1 (Innexin [Source:UniProtKB/TrEMBL;Acc:Q17394]) HSP 1 Score: 122.479 bits (306), Expect = 1.788e-51 Identity = 56/126 (44.44%), Postives = 88/126 (69.84%), Query Frame = 3
Query: 2646 KYECDLSDWLNYSCSTVILILFAMIISARQYIGKPISCWVPAEFTRSQEEYTESVCWVTSTYFLP-NSTISNDNERRNVTKLTYYQWVPFILIAQAALFYIPCLVWR-MFNWQSGYQDIRAISPLA 3017
+ + D D LNY ++ I+ FA+I+SA+QY+G PI CWVPA+FT + E+YTE+ CWV +TY+LP S + R +++YYQWVPF+L +A FYIPC++WR + +W SG ++++++ +A
Sbjct: 16 RVDDDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENTYYLPLTSAFPLEYGDRRARQISYYQWVPFVLALEALCFYIPCIMWRGLLHWHSGI-NVQSLTQMA 140 HSP 2 Score: 101.679 bits (252), Expect = 1.788e-51 Identity = 50/134 (37.31%), Postives = 79/134 (58.96%), Query Frame = 1
Query: 3025 INSQDRHYNIVLLALHLNDIFKTRLTVQGTGIATKIKKCICSVFCFWFGKRFGNFLVGLYLFVKFLYSLNIFGQLILMNTYLGTNYTLYGIHLLLDISSGRSWQESGNFPRVTICDFTIHKLANTHKYTVQCVL 3426
+++ R + +A H+ D A +I++ + V KR+ N++ LY+F+K LY N+ Q+ ++N++LGT+ YG H+L D+ +GR W+ SGNFPRVT+CDF + L N H +TVQCVL
Sbjct: 146 MDADARAATVQTIAGHMED-------------ALEIQREVTDVSGMCVQKRWANYVTLLYVFIKMLYLGNVVLQVFMLNSFLGTDNLFYGFHILRDLLNGREWEVSGNFPRVTMCDFEVRVLGNVHHHTVQCVL 266
BLAST of RBBP4-1 vs. Ensembl Celegans
Match: inx-1 (Innexin [Source:UniProtKB/TrEMBL;Acc:Q17394]) HSP 1 Score: 122.094 bits (305), Expect = 2.315e-51 Identity = 56/126 (44.44%), Postives = 88/126 (69.84%), Query Frame = 3
Query: 2646 KYECDLSDWLNYSCSTVILILFAMIISARQYIGKPISCWVPAEFTRSQEEYTESVCWVTSTYFLP-NSTISNDNERRNVTKLTYYQWVPFILIAQAALFYIPCLVWR-MFNWQSGYQDIRAISPLA 3017
+ + D D LNY ++ I+ FA+I+SA+QY+G PI CWVPA+FT + E+YTE+ CWV +TY+LP S + R +++YYQWVPF+L +A FYIPC++WR + +W SG ++++++ +A
Sbjct: 16 RVDDDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENTYYLPLTSAFPLEYGDRRARQISYYQWVPFVLALEALCFYIPCIMWRGLLHWHSGI-NVQSLTQMA 140 HSP 2 Score: 101.293 bits (251), Expect = 2.315e-51 Identity = 46/102 (45.10%), Postives = 69/102 (67.65%), Query Frame = 1
Query: 3121 ATKIKKCICSVFCFWFGKRFGNFLVGLYLFVKFLYSLNIFGQLILMNTYLGTNYTLYGIHLLLDISSGRSWQESGNFPRVTICDFTIHKLANTHKYTVQCVL 3426
A +I++ + V KR+ N++ LY+F+K LY N+ Q+ ++N++LGT+ YG H+L D+ +GR W+ SGNFPRVT+CDF + L N H +TVQCVL
Sbjct: 165 ALEIQREVTDVSGMCVQKRWANYVTLLYVFIKMLYLGNVVLQVFMLNSFLGTDNLFYGFHILRDLLNGREWEVSGNFPRVTMCDFEVRVLGNVHHHTVQCVL 266
BLAST of RBBP4-1 vs. Ensembl Celegans
Match: inx-1 (Innexin [Source:UniProtKB/TrEMBL;Acc:Q17394]) HSP 1 Score: 122.094 bits (305), Expect = 2.315e-51 Identity = 56/126 (44.44%), Postives = 88/126 (69.84%), Query Frame = 3
Query: 2646 KYECDLSDWLNYSCSTVILILFAMIISARQYIGKPISCWVPAEFTRSQEEYTESVCWVTSTYFLP-NSTISNDNERRNVTKLTYYQWVPFILIAQAALFYIPCLVWR-MFNWQSGYQDIRAISPLA 3017
+ + D D LNY ++ I+ FA+I+SA+QY+G PI CWVPA+FT + E+YTE+ CWV +TY+LP S + R +++YYQWVPF+L +A FYIPC++WR + +W SG ++++++ +A
Sbjct: 16 RVDDDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENTYYLPLTSAFPLEYGDRRARQISYYQWVPFVLALEALCFYIPCIMWRGLLHWHSGI-NVQSLTQMA 140 HSP 2 Score: 101.293 bits (251), Expect = 2.315e-51 Identity = 46/102 (45.10%), Postives = 69/102 (67.65%), Query Frame = 1
Query: 3121 ATKIKKCICSVFCFWFGKRFGNFLVGLYLFVKFLYSLNIFGQLILMNTYLGTNYTLYGIHLLLDISSGRSWQESGNFPRVTICDFTIHKLANTHKYTVQCVL 3426
A +I++ + V KR+ N++ LY+F+K LY N+ Q+ ++N++LGT+ YG H+L D+ +GR W+ SGNFPRVT+CDF + L N H +TVQCVL
Sbjct: 165 ALEIQREVTDVSGMCVQKRWANYVTLLYVFIKMLYLGNVVLQVFMLNSFLGTDNLFYGFHILRDLLNGREWEVSGNFPRVTMCDFEVRVLGNVHHHTVQCVL 266
BLAST of RBBP4-1 vs. Ensembl Celegans
Match: inx-18 (Innexin [Source:UniProtKB/TrEMBL;Acc:Q8MXG8]) HSP 1 Score: 118.627 bits (296), Expect = 9.509e-49 Identity = 57/135 (42.22%), Postives = 88/135 (65.19%), Query Frame = 3
Query: 2592 NVDSHFWSGLSRLKVDSQKYECDLSDWLNYSCSTVILILFAMIISARQYIGKPISCWVPAEFTRSQEEYTESVCWVTSTYFLPNSTI----SNDNERRNVTKLTYYQWVPFILIAQAALFYIPCLVWRMFNWQSG 2984
+ HF + S L+ + + D D L+Y ++ ++++FA+++SA+QY+G PI C+VPA+FTR+ E+YTE+ CWV +TY++P + +D ERR ++ YYQWVPF+L A F+IP VWRM QSG
Sbjct: 6 RIGMHFLA--SALRFLEPRVDDDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVPAQFTRAMEQYTENYCWVQNTYWVPFQDLIPHRLDDRERR---QIGYYQWVPFVLAVAALTFHIPSSVWRMLAGQSG 135 HSP 2 Score: 95.9005 bits (237), Expect = 9.509e-49 Identity = 50/130 (38.46%), Postives = 80/130 (61.54%), Query Frame = 1
Query: 3040 RHYNIVLLALHLNDIFKTRLTVQGTGIATKIKKCICSVFCFWFGKRFGNFLVGLYLFVKFLYSLNIFGQLILMNTYLGT-NYTLYGIHLLLDISSGRSWQESGNFPRVTICDFTIHKLANTHKYTVQCVL 3426
R + ++A H++D L Q A + I ++F GK +G ++ +Y+F+K L+ N+ Q +L+N++L T +Y ++G H+L D+ GR W++SG FPRVT+CDF I L N H++TVQCVL
Sbjct: 156 RDKTVDIVARHIDDA----LMYQRDHGARRHSVYIFAIFKL--GKFYGAYVSSVYIFIKALHLANVILQFMLLNSFLQTSDYPMFGAHVLYDLFMGREWRDSGKFPRVTLCDFEIRVLGNVHRHTVQCVL 279
BLAST of RBBP4-1 vs. Ensembl Fly
Match: Caf1-55 (gene:FBgn0263979 transcript:FBtr0301845) HSP 1 Score: 176.792 bits (447), Expect = 1.596e-47 Identity = 95/236 (40.25%), Postives = 143/236 (60.59%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLI---N*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P++ G YLL + TIC +DI+ + + A+ I TGH VEDV WH ++FGSV DDQ+L+IWD R +++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++H+WD+ KIG++ + D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++++ DE
Sbjct: 188 WNPNLNG----YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN---NNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDE 415 HSP 2 Score: 128.257 bits (321), Expect = 5.220e-31 Identity = 74/199 (37.19%), Postives = 111/199 (55.78%), Query Frame = 1
Query: 46 DDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGA--DNKSRL-----PLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
DD +EER +IWK N P +Y+L L+WPS T QWLP K + D+++++++LGTH +E+N L+ A + ++ Q +G+ DN+ + GK+ I +NH+G+VNRARYMPQN+ ++ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D +C
Sbjct: 12 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLP----SEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTIC 206 HSP 3 Score: 58.9214 bits (141), Expect = 1.602e-8 Identity = 45/196 (22.96%), Postives = 83/196 (42.35%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P A + + +L++DY + E S P ++ H + LSW+P + LL+ D + LWD + +++ A ++F +V VAW L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 125 NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 308
BLAST of RBBP4-1 vs. Ensembl Fly
Match: Caf1-55 (gene:FBgn0263979 transcript:FBtr0083052) HSP 1 Score: 176.792 bits (447), Expect = 1.711e-47 Identity = 95/236 (40.25%), Postives = 143/236 (60.59%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLI---N*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P++ G YLL + TIC +DI+ + + A+ I TGH VEDV WH ++FGSV DDQ+L+IWD R +++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++H+WD+ KIG++ + D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++++ DE
Sbjct: 189 WNPNLNG----YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN---NNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDE 416 HSP 2 Score: 129.028 bits (323), Expect = 2.523e-31 Identity = 76/206 (36.89%), Postives = 113/206 (54.85%), Query Frame = 1
Query: 25 DNNLMMNDDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGA--DNKSRL-----PLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
DN DD +EER +IWK N P +Y+L L+WPS T QWLP K + D+++++++LGTH +E+N L+ A + ++ Q +G+ DN+ + GK+ I +NH+G+VNRARYMPQN+ ++ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D +C
Sbjct: 6 DNAAESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLP----SEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTIC 207 HSP 3 Score: 58.9214 bits (141), Expect = 1.678e-8 Identity = 45/196 (22.96%), Postives = 83/196 (42.35%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P A + + +L++DY + E S P ++ H + LSW+P + LL+ D + LWD + +++ A ++F +V VAW L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 126 NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 309
BLAST of RBBP4-1 vs. Ensembl Fly
Match: l(2)09851 (gene:FBgn0022288 transcript:FBtr0335269) HSP 1 Score: 87.4261 bits (215), Expect = 1.716e-17 Identity = 54/186 (29.03%), Postives = 87/186 (46.77%), Query Frame = 2
Query: 749 RTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVS--ALHVFDTEAS-VYRVAWSPLQETLFLSAGLQHKIHIW------DVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVA 1279
R + GH VED+ W P E ++ S D+ + IWD R + + AH D N +SW+ + +GG DG +H+WD R+ S + F + V WSP + T+ S G +I +W D+++ D + D ++ P +L IH G + + ++ WHP L + S A
Sbjct: 263 RPLAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCED--AHQSDVNVISWN-RNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQKE-IKELHWHPQLPGVLLSTA 444
BLAST of RBBP4-1 vs. Ensembl Fly
Match: l(2)09851 (gene:FBgn0022288 transcript:FBtr0086043) HSP 1 Score: 87.4261 bits (215), Expect = 1.716e-17 Identity = 54/186 (29.03%), Postives = 87/186 (46.77%), Query Frame = 2
Query: 749 RTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVS--ALHVFDTEAS-VYRVAWSPLQETLFLSAGLQHKIHIW------DVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVA 1279
R + GH VED+ W P E ++ S D+ + IWD R + + AH D N +SW+ + +GG DG +H+WD R+ S + F + V WSP + T+ S G +I +W D+++ D + D ++ P +L IH G + + ++ WHP L + S A
Sbjct: 263 RPLAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCED--AHQSDVNVISWN-RNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQKE-IKELHWHPQLPGVLLSTA 444
BLAST of RBBP4-1 vs. Ensembl Fly
Match: Pex7 (gene:FBgn0035922 transcript:FBtr0076568) HSP 1 Score: 84.7297 bits (208), Expect = 4.541e-17 Identity = 54/190 (28.42%), Postives = 88/190 (46.32%), Query Frame = 2
Query: 740 NPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVS-ALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAM-IHSGHADAVTDIDWHPYLKATVASVAEDNMVNVW 1303
N T GH D + + P AN+F SV D L +W+ + P+ + AHA +A C W +L+TGG+DGL+ WD RK+ + ++ E +V R+A SP + SA IW++E+ E A +++ H + V +DW+P+ +A D++ NV+
Sbjct: 158 NSITTFVGHNDLIYGAKFSPLIANLFASVSTDGHLNLWN----SLDFAGKPLMSIEAHASEALCCDWSHFDRNVLVTGGSDGLIRGWDLRKMRTHVFELYSGEFAVRRLACSPHSAAVLASANYDFTTRIWNLER---------------GESAQEVNARHTEFVCGLDWNPHRTHQLADCGWDSLANVY 328
BLAST of RBBP4-1 vs. Ensembl Zebrafish
Match: rbb4l (retinoblastoma binding protein 4, like [Source:NCBI gene;Acc:322129]) HSP 1 Score: 177.563 bits (449), Expect = 1.021e-47 Identity = 95/233 (40.77%), Postives = 145/233 (62.23%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P+++G L + + TIC +DIS + + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++++WD+ KIG++ + D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 185 WNPNLSGNL-LSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 412 HSP 2 Score: 133.65 bits (335), Expect = 8.478e-33 Identity = 76/196 (38.78%), Postives = 111/196 (56.63%), Query Frame = 1
Query: 46 DDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSN-EADSIQIN---GADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
DD +EER +IWK N P +Y+L L+WPS T QWLP + E D+ +++++LGTH +E+N L+ A I N + + D+ + GA+ ++GK+ I +NH+G+VNRARYMPQN I+ATK+ D ++ G+C L L GH EGYG+SWN + G LL+ S D +C
Sbjct: 8 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTIC 203 HSP 3 Score: 55.8398 bits (133), Expect = 2.115e-7 Identity = 46/196 (23.47%), Postives = 81/196 (41.33%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P I + +L++DY + + S P ++ H + LSW+P S LL+ D + LWD + K+V A +F +V V+W L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 305
BLAST of RBBP4-1 vs. Ensembl Zebrafish
Match: rbb4l (retinoblastoma binding protein 4, like [Source:NCBI gene;Acc:322129]) HSP 1 Score: 177.563 bits (449), Expect = 1.021e-47 Identity = 95/233 (40.77%), Postives = 145/233 (62.23%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P+++G L + + TIC +DIS + + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++++WD+ KIG++ + D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 185 WNPNLSGNL-LSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 412 HSP 2 Score: 133.65 bits (335), Expect = 8.478e-33 Identity = 76/196 (38.78%), Postives = 111/196 (56.63%), Query Frame = 1
Query: 46 DDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSN-EADSIQIN---GADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
DD +EER +IWK N P +Y+L L+WPS T QWLP + E D+ +++++LGTH +E+N L+ A I N + + D+ + GA+ ++GK+ I +NH+G+VNRARYMPQN I+ATK+ D ++ G+C L L GH EGYG+SWN + G LL+ S D +C
Sbjct: 8 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTIC 203 HSP 3 Score: 55.8398 bits (133), Expect = 2.115e-7 Identity = 46/196 (23.47%), Postives = 81/196 (41.33%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P I + +L++DY + + S P ++ H + LSW+P S LL+ D + LWD + K+V A +F +V V+W L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 305
BLAST of RBBP4-1 vs. Ensembl Zebrafish
Match: rbb4l (retinoblastoma binding protein 4, like [Source:NCBI gene;Acc:322129]) HSP 1 Score: 177.563 bits (449), Expect = 1.183e-47 Identity = 95/233 (40.77%), Postives = 145/233 (62.23%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P+++G L + + TIC +DIS + + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++++WD+ KIG++ + D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 184 WNPNLSGNL-LSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 411 HSP 2 Score: 132.109 bits (331), Expect = 3.280e-32 Identity = 76/199 (38.19%), Postives = 108/199 (54.27%), Query Frame = 1
Query: 46 DDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRL-------PLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
DD +EER +IWK N P +Y+L L+WPS T QWLP + E D+ +++++LGTH +E+N L+ A I N D Q + + S ++GK+ I +NH+G+VNRARYMPQN I+ATK+ D ++ G+C L L GH EGYG+SWN + G LL+ S D +C
Sbjct: 8 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTSDEQNHLVIASVQIPN----DDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTIC 202 HSP 3 Score: 55.8398 bits (133), Expect = 2.281e-7 Identity = 46/196 (23.47%), Postives = 81/196 (41.33%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P I + +L++DY + + S P ++ H + LSW+P S LL+ D + LWD + K+V A +F +V V+W L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 121 NHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 304
BLAST of RBBP4-1 vs. Ensembl Zebrafish
Match: rbbp4 (retinoblastoma binding protein 4 [Source:NCBI gene;Acc:321726]) HSP 1 Score: 176.022 bits (445), Expect = 4.120e-47 Identity = 95/233 (40.77%), Postives = 143/233 (61.37%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P+++G L + + TIC +DIS + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++++WD+ KIG++ D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 185 WNPNLSGCL-LSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 412 HSP 2 Score: 129.413 bits (324), Expect = 2.432e-31 Identity = 75/199 (37.69%), Postives = 107/199 (53.77%), Query Frame = 1
Query: 46 DDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRL-------PLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
DD +EER +IWK N P +Y+L L+WPS T QWLP + E D ++++++LGTH +E+N L+ A + N D Q + + S ++GK+ I +NH+G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D +C
Sbjct: 9 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSVHRLVLGTHTSDEQNHLVIASVQLPN----DDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTIC 203 HSP 3 Score: 56.225 bits (134), Expect = 1.486e-7 Identity = 52/226 (23.01%), Postives = 85/226 (37.61%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGD--------------DVLSYDEEDRFPAELA----------------MIHS--GHADAVTDIDWHPYLKATVASVAEDNMVNVWQI 1309
H+ +V + P I + +L++DY + + S P ++ H + LSW+P S LL+ D + LWD + K+V A +F +V V+W L E+LF S K+ IWD + LS++ F +HS H D + + W P+ + +AS D +NVW +
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
BLAST of RBBP4-1 vs. Ensembl Zebrafish
Match: grwd1 (glutamate-rich WD repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9844]) HSP 1 Score: 96.6709 bits (239), Expect = 2.162e-20 Identity = 62/189 (32.80%), Postives = 92/189 (48.68%), Query Frame = 2
Query: 725 GGSTLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTE---ASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEE-DRFPAELAMIHSGHADAVTDIDWHPYLKATVASVA 1279
GG+ R + H VED+ W P EA +F S DQ + IWD R S S AH+ D N +SW+ T +L+GG DGL+ +WD R+ S V + A V V WSP+ ++F ++G I WD+ D+ E+ + P +L +H G + V ++ WHP + + S A
Sbjct: 258 GGTWKIDQRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPPNSMLSA----NEAHSSDVNVISWN-RTEPFILSGGDDGLLKVWDLRQFQSGRPVASFKQHSAPVTSVQWSPVDSSVFAASGADDVISQWDLSVESCDMGGQAEDVKQLPPQLLFLHQGQKE-VKELHWHPQIPGVLISTA 440
BLAST of RBBP4-1 vs. Ensembl Xenopus
Match: rbbp4 (retinoblastoma binding protein 4 [Source:NCBI gene;Acc:496866]) HSP 1 Score: 175.637 bits (444), Expect = 7.261e-47 Identity = 95/233 (40.77%), Postives = 143/233 (61.37%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P+++G L + + TIC +DIS + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++++WD+ KIG++ D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 191 WNPNLSGNL-LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 418 HSP 2 Score: 129.028 bits (323), Expect = 4.896e-31 Identity = 75/199 (37.69%), Postives = 106/199 (53.27%), Query Frame = 1
Query: 46 DDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLP--FEEKHEDHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRL-------PLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
DD +EER +IWK N P +Y+L L+WPS T QWLP +D +I++++LGTH +E+N L+ A + N D Q + + S ++GK+ I +NH+G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D +C
Sbjct: 15 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSDEQNHLVIASVQLPN----DDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTIC 209 HSP 3 Score: 56.225 bits (134), Expect = 1.976e-7 Identity = 46/196 (23.47%), Postives = 81/196 (41.33%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P I + +L++DY + + S P ++ H + LSW+P S LL+ D + LWD + K+V A +F +V V+W L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 128 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 311
BLAST of RBBP4-1 vs. Ensembl Xenopus
Match: rbbp4 (retinoblastoma binding protein 4 [Source:NCBI gene;Acc:496866]) HSP 1 Score: 175.637 bits (444), Expect = 1.241e-46 Identity = 95/233 (40.77%), Postives = 143/233 (61.37%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P+++G L + + TIC +DIS + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++++WD+ KIG++ D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 215 WNPNLSGNL-LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 442 HSP 2 Score: 129.028 bits (323), Expect = 6.695e-31 Identity = 75/199 (37.69%), Postives = 106/199 (53.27%), Query Frame = 1
Query: 46 DDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLP--FEEKHEDHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRL-------PLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
DD +EER +IWK N P +Y+L L+WPS T QWLP +D +I++++LGTH +E+N L+ A + N D Q + + S ++GK+ I +NH+G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D +C
Sbjct: 39 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSDEQNHLVIASVQLPN----DDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTIC 233 HSP 3 Score: 56.225 bits (134), Expect = 2.357e-7 Identity = 46/196 (23.47%), Postives = 81/196 (41.33%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P I + +L++DY + + S P ++ H + LSW+P S LL+ D + LWD + K+V A +F +V V+W L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 152 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 335
BLAST of RBBP4-1 vs. Ensembl Xenopus
Match: rbbp4 (retinoblastoma binding protein 4 [Source:NCBI gene;Acc:496866]) HSP 1 Score: 174.481 bits (441), Expect = 3.381e-46 Identity = 91/216 (42.13%), Postives = 132/216 (61.11%), Query Frame = 2
Query: 692 TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEA-SVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
TIC +DIS + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ +++V WSP ET+ S+G ++++WD+ KIG++ D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 232 TICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 443 HSP 2 Score: 130.183 bits (326), Expect = 3.461e-31 Identity = 75/197 (38.07%), Postives = 105/197 (53.30%), Query Frame = 1
Query: 46 DDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLP--FEEKHEDHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRL-------PLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQV 555
DD +EER +IWK N P +Y+L L+WPS T QWLP +D +I++++LGTH +E+N L+ A + N D Q + + S ++GK+ I +NH+G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D V
Sbjct: 7 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSDEQNHLVIASVQLPN----DDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHV 199
BLAST of RBBP4-1 vs. Ensembl Xenopus
Match: rbbp7 (retinoblastoma binding protein 7 [Source:NCBI gene;Acc:394900]) HSP 1 Score: 172.94 bits (437), Expect = 6.052e-46 Identity = 87/216 (40.28%), Postives = 131/216 (60.65%), Query Frame = 2
Query: 692 TICAFDISQSAG-GSTLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEA-SVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
T+C +DIS G ++ TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ +++V WSP ET+ S+G ++++WD+ KIG++ + D ED P EL IH GH ++D W+P + SV+EDN++ +WQ+ ++I+ DE
Sbjct: 200 TVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 411 HSP 2 Score: 130.568 bits (327), Expect = 1.539e-31 Identity = 78/204 (38.24%), Postives = 109/204 (53.43%), Query Frame = 1
Query: 31 NLMMNDDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRL-------PLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
N M +DT+EER +IWK N P +Y+L L+WPS T QWLP + E D+ ++ ++LGTH +E+N L+ A I N D Q + + S ++GK+ +NH+G+VNRARYMPQN I+ATK+ D ++ G+C L L GH EGYG+SWN + G LL+ S D VC
Sbjct: 3 NKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSDEQNHLVVARVQIPN----DDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVC 202 HSP 3 Score: 53.1434 bits (126), Expect = 2.252e-6 Identity = 47/196 (23.98%), Postives = 81/196 (41.33%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P I + +L++DY + + S P ++ H + LSW+ S LL+ D V LWD + K+V A +F ++V VAW L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 121 NHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 304
BLAST of RBBP4-1 vs. Ensembl Xenopus
Match: rbbp7 (retinoblastoma binding protein 7 [Source:NCBI gene;Acc:394900]) HSP 1 Score: 172.94 bits (437), Expect = 9.150e-46 Identity = 87/216 (40.28%), Postives = 131/216 (60.65%), Query Frame = 2
Query: 692 TICAFDISQSAG-GSTLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEA-SVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
T+C +DIS G ++ TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ +++V WSP ET+ S+G ++++WD+ KIG++ + D ED P EL IH GH ++D W+P + SV+EDN++ +WQ+ ++I+ DE
Sbjct: 216 TVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 427 HSP 2 Score: 130.568 bits (327), Expect = 1.609e-31 Identity = 80/211 (37.91%), Postives = 114/211 (54.03%), Query Frame = 1
Query: 10 SFY*FDNNLMMNDDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRL-------PLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
+FY F +L+ +DT+EER +IWK N P +Y+L L+WPS T QWLP + E D+ ++ ++LGTH +E+N L+ A I N D Q + + S ++GK+ +NH+G+VNRARYMPQN I+ATK+ D ++ G+C L L GH EGYG+SWN + G LL+ S D VC
Sbjct: 13 TFYNFFFSLVF-EDTVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSDEQNHLVVARVQIPN----DDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVC 218 HSP 3 Score: 53.1434 bits (126), Expect = 2.231e-6 Identity = 47/196 (23.98%), Postives = 81/196 (41.33%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P I + +L++DY + + S P ++ H + LSW+ S LL+ D V LWD + K+V A +F ++V VAW L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 137 NHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 320
BLAST of RBBP4-1 vs. Ensembl Mouse
Match: Rbbp4 (retinoblastoma binding protein 4, chromatin remodeling factor [Source:MGI Symbol;Acc:MGI:1194912]) HSP 1 Score: 175.252 bits (443), Expect = 6.579e-47 Identity = 95/233 (40.77%), Postives = 143/233 (61.37%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P+++G L + + TIC +DIS + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++++WD+ KIG++ D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 185 WNPNLSGHL-LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 412 HSP 2 Score: 130.568 bits (327), Expect = 1.112e-31 Identity = 76/199 (38.19%), Postives = 107/199 (53.77%), Query Frame = 1
Query: 46 DDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRL-------PLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
DD +EER +IWK N P +Y+L L+WPS T QWLP + E D +I++++LGTH +E+N L+ A + N D Q + + S ++GK+ I +NH+G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D +C
Sbjct: 9 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPN----DDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTIC 203 HSP 3 Score: 55.8398 bits (133), Expect = 2.033e-7 Identity = 46/196 (23.47%), Postives = 81/196 (41.33%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P I + +L++DY + + S P ++ H + LSW+P S LL+ D + LWD + K+V A +F +V V+W L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 305
BLAST of RBBP4-1 vs. Ensembl Mouse
Match: Rbbp7 (retinoblastoma binding protein 7, chromatin remodeling factor [Source:MGI Symbol;Acc:MGI:1194910]) HSP 1 Score: 171.4 bits (433), Expect = 1.094e-45 Identity = 87/216 (40.28%), Postives = 132/216 (61.11%), Query Frame = 2
Query: 692 TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEA-SVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
T+C +DI+ + A+ I TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ +++V WSP ET+ S+G ++++WD+ KIG++ + D ED P EL IH GH ++D W+P + SV+EDN++ +WQ+ ++I+ DE
Sbjct: 191 TVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 402 HSP 2 Score: 129.413 bits (324), Expect = 2.385e-31 Identity = 78/194 (40.21%), Postives = 104/194 (53.61%), Query Frame = 1
Query: 40 MNDDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
M +DT+EER +IWK N P +Y+L L WPS T QWLP K E D+ ++ ++LGTH +E+N L+ A I N D Q + + S GK+ +NH+G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D VC
Sbjct: 6 MFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPN----DDAQFDASHCDSDK--GGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVC 193 HSP 3 Score: 56.6102 bits (135), Expect = 1.099e-7 Identity = 48/196 (24.49%), Postives = 84/196 (42.86%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEA----SSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P +I + +L++DY + A S P ++ H + LSW+ S LL+ D V LWD + K+V A +F ++V VAW L E+LF S K+ IWD P+ L H+ + ++ ++PY + +A+ + D V +W +++
Sbjct: 112 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS---------NTTSKPSHLVDAHTAEVNCLS---FNPYSEFILATGSADKTVALWDLRN 295
BLAST of RBBP4-1 vs. Ensembl Mouse
Match: Rbbp7 (retinoblastoma binding protein 7, chromatin remodeling factor [Source:MGI Symbol;Acc:MGI:1194910]) HSP 1 Score: 171.785 bits (434), Expect = 1.095e-45 Identity = 87/216 (40.28%), Postives = 132/216 (61.11%), Query Frame = 2
Query: 692 TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEA-SVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
T+C +DI+ + A+ I TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ +++V WSP ET+ S+G ++++WD+ KIG++ + D ED P EL IH GH ++D W+P + SV+EDN++ +WQ+ ++I+ DE
Sbjct: 200 TVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 411 HSP 2 Score: 128.642 bits (322), Expect = 4.837e-31 Identity = 76/197 (38.58%), Postives = 105/197 (53.30%), Query Frame = 1
Query: 40 MNDDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSN---EADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
M +DT+EER +IWK N P +Y+L L WPS T QWLP K E D+ ++ ++LGTH +E+N L+ A I N + +A + + + GK+ +NH+G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D VC
Sbjct: 6 MFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVC 202 HSP 3 Score: 56.9954 bits (136), Expect = 8.377e-8 Identity = 48/196 (24.49%), Postives = 84/196 (42.86%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEA----SSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P +I + +L++DY + A S P ++ H + LSW+ S LL+ D V LWD + K+V A +F ++V VAW L E+LF S K+ IWD P+ L H+ + ++ ++PY + +A+ + D V +W +++
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS---------NTTSKPSHLVDAHTAEVNCLS---FNPYSEFILATGSADKTVALWDLRN 304
BLAST of RBBP4-1 vs. Ensembl Mouse
Match: Rbbp7 (retinoblastoma binding protein 7, chromatin remodeling factor [Source:MGI Symbol;Acc:MGI:1194910]) HSP 1 Score: 132.109 bits (331), Expect = 1.383e-32 Identity = 70/173 (40.46%), Postives = 103/173 (59.54%), Query Frame = 2
Query: 692 TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEA-SVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMI 1204
T+C +DI+ + A+ I TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ +++V WSP ET+ S+G ++++WD+ KIG++ + D ED P L I
Sbjct: 200 TVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLVCI 369 HSP 2 Score: 128.642 bits (322), Expect = 2.606e-31 Identity = 76/197 (38.58%), Postives = 105/197 (53.30%), Query Frame = 1
Query: 40 MNDDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSN---EADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
M +DT+EER +IWK N P +Y+L L WPS T QWLP K E D+ ++ ++LGTH +E+N L+ A I N + +A + + + GK+ +NH+G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D VC
Sbjct: 6 MFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVC 202 HSP 3 Score: 56.9954 bits (136), Expect = 7.481e-8 Identity = 48/196 (24.49%), Postives = 84/196 (42.86%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEA----SSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P +I + +L++DY + A S P ++ H + LSW+ S LL+ D V LWD + K+V A +F ++V VAW L E+LF S K+ IWD P+ L H+ + ++ ++PY + +A+ + D V +W +++
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS---------NTTSKPSHLVDAHTAEVNCLS---FNPYSEFILATGSADKTVALWDLRN 304
BLAST of RBBP4-1 vs. Ensembl Mouse
Match: Rbbp7 (retinoblastoma binding protein 7, chromatin remodeling factor [Source:MGI Symbol;Acc:MGI:1194910]) HSP 1 Score: 127.102 bits (318), Expect = 2.541e-32 Identity = 75/198 (37.88%), Postives = 106/198 (53.54%), Query Frame = 1
Query: 37 MMNDDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSN---EADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
++ +DT+EER +IWK N P +Y+L L WPS T QWLP K E D+ ++ ++LGTH +E+N L+ A I N + +A + + + GK+ +NH+G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D VC
Sbjct: 33 LVFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVC 230
BLAST of RBBP4-1 vs. UniProt/SwissProt
Match: sp|O01393|UNC9_CAEEL (Innexin unc-9 OS=Caenorhabditis elegans OX=6239 GN=unc-9 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.308e-51 Identity = 67/153 (43.79%), Postives = 95/153 (62.09%), Query Frame = 3
Query: 2658 DLSDWLNYSCSTVILILFAMIISARQYIGKPISCWVPAEFTRSQEEYTESVCWVTSTYFLP-NSTISNDNERRNVTKLTYYQWVPFILIAQAALFYIPCLVWRMFNWQSGYQ-----DIRAISPLADLYQLSRPPLQYCPTSPASQ*HLQDQT 3098
D+ D LNY +T I+ +FA+++SA+QY+G PI CWVPA FT E+YTE+ CWV +TYFLP + I ++ R ++ YYQWVPF+L +A LFY+P +VWR+ +WQSG + S L DL +R LQ T+ H++ Q
Sbjct: 22 DIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNTYFLPLHDYIPHNYAERENRQIGYYQWVPFVLALEALLFYVPTIVWRLLSWQSGIHVQSLVQMACDSRLLDLESRNR-ALQTIATNVEEALHVKHQV 173 HSP 2 Score: 97.0561 bits (240), Expect = 1.308e-51 Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 3181 GNFLVGLYLFVKFLYSLNIFGQLILMNTYLGTNYTLYGIHLLLDISSGRSWQESGNFPRVTICDFTIHKLANTHKYTVQCVL 3426
G + LY+ VK LY++NI GQ+ L+NT+LG YG+ +L D+ +GR W+ESG+FPRVT+CDF + L N H++TVQCVL
Sbjct: 192 GAAVTFLYISVKILYTVNIVGQIFLLNTFLGNRSKWYGLQVLNDLMNGREWEESGHFPRVTLCDFEVKVLGNVHRHTVQCVL 273
BLAST of RBBP4-1 vs. UniProt/SwissProt
Match: sp|Q7ZTY4|RBBP7_DANRE (Histone-binding protein RBBP7 OS=Danio rerio OX=7955 GN=rbbp7 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 8.470e-47 Identity = 95/233 (40.77%), Postives = 145/233 (62.23%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P+++G L + + TIC +DIS + + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++++WD+ KIG++ + D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 185 WNPNLSGNL-LSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 412 HSP 2 Score: 132.109 bits (331), Expect = 2.189e-31 Identity = 78/196 (39.80%), Postives = 113/196 (57.65%), Query Frame = 1
Query: 46 DDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSN-EADSIQIN---GADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKD--SFIYS--------DGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
DD +EER +IWK N P +Y+L L+WPS T QWLP + E D+ +++++LGTH +E+N L+ A I N + + D+ + GA+ ++GK+ I +NH+G+VNRARYMPQN I+ATK+ D +F Y+ G+C L L GH EGYG+SWN + G LL+ S D +C
Sbjct: 8 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTSDEQNHLVIASAQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLAFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTIC 203 HSP 3 Score: 54.299 bits (129), Expect = 5.066e-6 Identity = 46/196 (23.47%), Postives = 80/196 (40.82%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P I + +L +DY + + S P ++ H + LSW+P S LL+ D + LWD + K+V A +F +V V+W L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPTSDVLAFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 305
BLAST of RBBP4-1 vs. UniProt/SwissProt
Match: sp|Q61Y48|LIN53_CAEBR (Probable histone-binding protein lin-53 OS=Caenorhabditis briggsae OX=6238 GN=lin-53 PE=3 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 1.570e-46 Identity = 95/232 (40.95%), Postives = 140/232 (60.34%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEA-SVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFAD 1330
W+P+ G L + + T+C +DI+ +AG + AR I GH+ VEDV WH +FGSVGDD++LLIWD R ++ P + AH+ + NCL+++P + +L TG AD V LWD R L LH F++ +++V WSP ET+ S+G ++H+WD+ KIG+D + D ED P EL IH GH ++D W+P V SV+EDN++ VWQ+ D+I+ D
Sbjct: 180 WNPNKEG-LILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDLR------TNVPGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQTAEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYND 403 HSP 2 Score: 135.191 bits (339), Expect = 2.019e-32 Identity = 71/185 (38.38%), Postives = 105/185 (56.76%), Query Frame = 1
Query: 58 EERRIWKINCPLMYNLAHFDTLDWPSFTCQWLP-FEEKHEDHTIYKILLGTHADEEENKLIYADYIISNSN---EADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY-----------SDGNCLLTLSGHSDEGYGISWNQQVEGRLLTCSFDQVC*CH 567
+E +IWK N P +Y+L L+WPS + QWLP E++ DHT+++++LGTH +E+N L+ + + +A + +NGK+ +NH+G+VNRARYMPQ +I+ATKS D +I+ + N LL L GH+ EGYG+SWN EG +L+ S DQ CH
Sbjct: 16 DEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPEIEKESSDHTVHRLILGTHTSDEQNHLLISKICMPTDEAQFDASRYDTERGEFGGFGAVNGKVEPDIRINHEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKYPSVPKDNTFNPLLKLKGHTKEGYGLSWNPNKEGLILSASDDQTV-CH 199
BLAST of RBBP4-1 vs. UniProt/SwissProt
Match: sp|Q24572|CAF1_DROME (Probable histone-binding protein Caf1 OS=Drosophila melanogaster OX=7227 GN=Caf1 PE=1 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.715e-46 Identity = 95/236 (40.25%), Postives = 143/236 (60.59%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLI---N*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P++ G YLL + TIC +DI+ + + A+ I TGH VEDV WH ++FGSV DDQ+L+IWD R +++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++H+WD+ KIG++ + D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++++ DE
Sbjct: 189 WNPNLNG----YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN---NNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDE 416 HSP 2 Score: 129.028 bits (323), Expect = 2.529e-30 Identity = 76/206 (36.89%), Postives = 113/206 (54.85%), Query Frame = 1
Query: 25 DNNLMMNDDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGA--DNKSRL-----PLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
DN DD +EER +IWK N P +Y+L L+WPS T QWLP K + D+++++++LGTH +E+N L+ A + ++ Q +G+ DN+ + GK+ I +NH+G+VNRARYMPQN+ ++ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D +C
Sbjct: 6 DNAAESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLP----SEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTIC 207 HSP 3 Score: 58.9214 bits (141), Expect = 1.682e-7 Identity = 45/196 (22.96%), Postives = 83/196 (42.35%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P A + + +L++DY + E S P ++ H + LSW+P + LL+ D + LWD + +++ A ++F +V VAW L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 126 NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 309
BLAST of RBBP4-1 vs. UniProt/SwissProt
Match: sp|O22467|MSI1_ARATH (Histone-binding protein MSI1 OS=Arabidopsis thaliana OX=3702 GN=MSI1 PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 3.023e-46 Identity = 88/214 (41.12%), Postives = 132/214 (61.68%), Query Frame = 2
Query: 695 ICAFDISQSAGGSTLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
IC +DI+ + +L+ + H+ VEDV WH +FGSVGDDQ LLIWD R + S+S PVQ VVAH+ + NCL+++P ++ TG D V L+D RKL +ALH FD+ + V++V W+P ET+ S L ++ +WD+ +I ++ D ED P EL IH GH ++D W+P ++SVAEDN++ +WQ+ ++I+ DE
Sbjct: 203 ICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR---SPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDG-PPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDE 412 HSP 2 Score: 123.635 bits (309), Expect = 1.691e-28 Identity = 74/188 (39.36%), Postives = 111/188 (59.04%), Query Frame = 1
Query: 58 EERRIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKH--EDHTIYKILLGTHADEEE-NKLIYADYIIS-NSNEADSIQINGADNKSRLP----LNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIYS----------DGNC--LLTLSGHSDEGYGISWNQQVEGRLLTCSFD-QVC 558
EE +IWK N P +Y+L L+WPS T +WLP E+ +D+++ K++LGTH E E N L+ A + + E+++ Q + D++S GK+ I + +NH G+VNRARYMPQN I+ATK+ + +++ DG C L L GHS EGYG+SW++ +G LL+ S D Q+C
Sbjct: 19 EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQKMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYD--DDRSEFGGFGCATGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQIC 204
BLAST of RBBP4-1 vs. TrEMBL
Match: H9CXT2 (RBBP4-1 OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 441.81 bits (1135), Expect = 1.751e-141 Identity = 218/231 (94.37%), Postives = 221/231 (95.67%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+ V G L + + TICAFDISQSAGGSTLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE
Sbjct: 157 WNQQVEGRL-LTCSFDQTICAFDISQSAGGSTLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 386 HSP 2 Score: 362.459 bits (929), Expect = 2.378e-111 Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 1
Query: 37 MMNDDTIEERRIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHEDHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIYSDGNCLLTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC*CHVGFRFGG 588
MMNDDTIEERRIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHEDHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIYSDGNCLLTLSGHSDEGYGISWNQQVEGRLLTCSFDQ +C + GG
Sbjct: 1 MMNDDTIEERRIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHEDHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIYSDGNCLLTLSGHSDEGYGISWNQQVEGRLLTCSFDQTICAFDISQSAGG 185
BLAST of RBBP4-1 vs. TrEMBL
Match: A0A4E0RPY2 (Innexin OS=Fasciola hepatica OX=6192 GN=inx PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.158e-79 Identity = 78/137 (56.93%), Postives = 108/137 (78.83%), Query Frame = 3
Query: 2595 VDSHFWSGLSRLKVDSQKY--ECDLSDWLNYSCSTVILILFAMIISARQYIGKPISCWVPAEFTRSQEEYTESVCWVTSTYFLPNSTIS-----NDNERRNVTKLTYYQWVPFILIAQAALFYIPCLVWRMFNWQSG 2984
+D+HF++GL++ K+D+ K+ + D SD +++ +T++L++F ++ISARQYIGKPI+CWVP EFTR+QEEY ESVCWVTSTYF+P + +S D E R K+ YYQWVPFIL+ QA LF +PC+VWR+FNWQSG
Sbjct: 1 MDTHFFAGLTKFKLDAGKFRRDDDFSDRFSHTFTTLLLVIFTLVISARQYIGKPIACWVPTEFTRAQEEYAESVCWVTSTYFIPTNDVSVPVKIADREDR---KIHYYQWVPFILMLQAFLFNLPCIVWRLFNWQSG 134 HSP 2 Score: 155.606 bits (392), Expect = 4.158e-79 Identity = 69/148 (46.62%), Postives = 98/148 (66.22%), Query Frame = 1
Query: 2986 TKISELSRHLQICINSQDRHYNIVLLALHLNDIFKTRLTVQGTGIATKIKKCICSVFCFWFGKRFGNFLVGLYLFVKFLYSLNIFGQLILMNTYLGTNYTLYGIHLLLDISSGRSWQESGNFPRVTICDFTIHKLANTHKYTVQCVLP 3429
+ I E++ +++ + + R N+ +A H+ D + + +G A + + C+ C WFGKR+GN+L+ LYL K LY LN+ GQ MN LGTNYT YG+ LL D++ G WQESGNFPR+T+CDF + KLANTH++TVQCVLP
Sbjct: 138 SSIMEVACEIEMIKDPETRKSNVTYVARHVEDALTAQREYR-SGCAVRCRHCLAKSCCLWFGKRYGNYLICLYLITKSLYILNVVGQFFFMNRILGTNYTFYGLDLLRDLAEGYMWQESGNFPRITLCDFEVRKLANTHRHTVQCVLP 284
BLAST of RBBP4-1 vs. TrEMBL
Match: A0A158R819 (Innexin OS=Taenia asiatica OX=60517 GN=inx PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.624e-78 Identity = 73/134 (54.48%), Postives = 106/134 (79.10%), Query Frame = 3
Query: 2595 VDSHFWSGLSRLKVDSQKY--ECDLSDWLNYSCSTVILILFAMIISARQYIGKPISCWVPAEFTRSQEEYTESVCWVTSTYFLP--NSTISNDNERRNVTKLTYYQWVPFILIAQAALFYIPCLVWRMFNWQSG 2984
+D+HF++GL++ K+D+ K+ + D +D +++ +T++L++F +++SARQYIGKPI+CWVP EFTR+QEEY ESVCWVTSTYFLP T+ + R K+ YYQWVPF+L+ QA LF +PC++WR+FNWQSG
Sbjct: 1 MDTHFFAGLTKFKLDAGKHRRDDDFADRFSHNFTTLLLVIFTLVVSARQYIGKPIACWVPTEFTRAQEEYAESVCWVTSTYFLPTKQKTVPESTQEREERKILYYQWVPFVLMIQAFLFNLPCIIWRLFNWQSG 134 HSP 2 Score: 152.91 bits (385), Expect = 1.624e-78 Identity = 70/148 (47.30%), Postives = 96/148 (64.86%), Query Frame = 1
Query: 2986 TKISELSRHLQICINSQDRHYNIVLLALHLNDIFKTRLTVQGTGIATKIKKCICSVFCFWFGKRFGNFLVGLYLFVKFLYSLNIFGQLILMNTYLGTNYTLYGIHLLLDISSGRSWQESGNFPRVTICDFTIHKLANTHKYTVQCVLP 3429
+ I E+S +++ + R NI +A H+ D ++ + G ++ + CFWFGKR+GN+L+ LYL K LY N+ GQ LMN LGTNYT YG+ L+ DI+ G W+ESGNFPR+T+CDF I KLAN+H+YTVQCVLP
Sbjct: 138 SSIMEVSCDIEMIRDPDSRKSNITYVARHIEDALTSQREYRD-GCGVNCRQAMARSCCFWFGKRYGNYLICLYLITKALYIFNVVGQFFLMNRILGTNYTFYGLDLIRDIAEGYLWEESGNFPRITLCDFEIRKLANSHRYTVQCVLP 284
BLAST of RBBP4-1 vs. TrEMBL
Match: A0A4S2LLY4 (Innexin OS=Opisthorchis felineus OX=147828 GN=inx PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.120e-76 Identity = 76/137 (55.47%), Postives = 106/137 (77.37%), Query Frame = 3
Query: 2595 VDSHFWSGLSRLKVDSQKY--ECDLSDWLNYSCSTVILILFAMIISARQYIGKPISCWVPAEFTRSQEEYTESVCWVTSTYFLPNSTIS-----NDNERRNVTKLTYYQWVPFILIAQAALFYIPCLVWRMFNWQSG 2984
+D+HF++GL++ K+D+ K+ + D SD +++ + ++L++F ++ISARQYIGKPI+CWVP EFTR+QEEY ESVCWVTSTYF+P ++ D E R K+ YYQWVPFIL+ QA LF +PC+VWR+FNWQSG
Sbjct: 1 MDTHFFAGLTKFKLDAGKFRRDDDFSDRFSHTFTPLLLVIFTLVISARQYIGKPIACWVPTEFTRAQEEYAESVCWVTSTYFIPTREVNVPVNLADREDR---KIHYYQWVPFILMIQAFLFNLPCIVWRLFNWQSG 134 HSP 2 Score: 151.369 bits (381), Expect = 1.120e-76 Identity = 70/148 (47.30%), Postives = 96/148 (64.86%), Query Frame = 1
Query: 2986 TKISELSRHLQICINSQDRHYNIVLLALHLNDIFKTRLTVQGTGIATKIKKCICSVFCFWFGKRFGNFLVGLYLFVKFLYSLNIFGQLILMNTYLGTNYTLYGIHLLLDISSGRSWQESGNFPRVTICDFTIHKLANTHKYTVQCVLP 3429
+ I E++ +++ + + R N+ +A H+ D T+ + +G K + + C WFGKR+GN+L+ LYL K LY LN+ GQ MN LGTNYT YGI LL DI+ G WQESGNFPR+T+CDF + KLAN H++TVQCVLP
Sbjct: 138 SSIMEVACEIEMIKDPETRKSNVTYVARHIEDALTTQREYR-SGCGVKCRHFLARSCCLWFGKRYGNYLICLYLITKSLYILNVVGQFFFMNRILGTNYTFYGIDLLRDIAEGIVWQESGNFPRITLCDFEVRKLANVHRHTVQCVLP 284
BLAST of RBBP4-1 vs. TrEMBL
Match: A0A075A080 (Innexin OS=Opisthorchis viverrini OX=6198 GN=inx PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.207e-76 Identity = 76/137 (55.47%), Postives = 106/137 (77.37%), Query Frame = 3
Query: 2595 VDSHFWSGLSRLKVDSQKY--ECDLSDWLNYSCSTVILILFAMIISARQYIGKPISCWVPAEFTRSQEEYTESVCWVTSTYFLPNSTIS-----NDNERRNVTKLTYYQWVPFILIAQAALFYIPCLVWRMFNWQSG 2984
+D+HF++GL++ K+D+ K+ + D SD +++ + ++L++F ++ISARQYIGKPI+CWVP EFTR+QEEY ESVCWVTSTYF+P ++ D E R K+ YYQWVPFIL+ QA LF +PC+VWR+FNWQSG
Sbjct: 1 MDTHFFAGLTKFKLDAGKFRRDDDFSDRFSHTFTPLLLVIFTLVISARQYIGKPIACWVPTEFTRAQEEYAESVCWVTSTYFIPTREVNVPVNLADREDR---KIHYYQWVPFILMIQAFLFNLPCIVWRLFNWQSG 134 HSP 2 Score: 150.984 bits (380), Expect = 1.207e-76 Identity = 70/148 (47.30%), Postives = 96/148 (64.86%), Query Frame = 1
Query: 2986 TKISELSRHLQICINSQDRHYNIVLLALHLNDIFKTRLTVQGTGIATKIKKCICSVFCFWFGKRFGNFLVGLYLFVKFLYSLNIFGQLILMNTYLGTNYTLYGIHLLLDISSGRSWQESGNFPRVTICDFTIHKLANTHKYTVQCVLP 3429
+ I E++ +++ + + R N+ +A H+ D T+ + +G K + + C WFGKR+GN+L+ LYL K LY LN+ GQ MN LGTNYT YGI LL DI+ G WQESGNFPR+T+CDF + KLAN H++TVQCVLP
Sbjct: 138 SSIMEVACEIEMIKDPETRKSNVTYVARHIEDALTTQREYR-SGCGVKCRHFLARSCCLWFGKRYGNYLICLYLITKSLYILNVVGQFFFMNRILGTNYTFYGIDLLRDIAEGIVWQESGNFPRITLCDFEVRKLANVHRHTVQCVLP 284
BLAST of RBBP4-1 vs. Ensembl Cavefish
Match: rbb4l (histone-binding protein RBBP7 [Source:NCBI gene;Acc:103023991]) HSP 1 Score: 177.178 bits (448), Expect = 1.300e-47 Identity = 95/233 (40.77%), Postives = 145/233 (62.23%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P+++G L + + TIC +DIS S + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R +++++ P V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++++WD+ KIG++ + D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 185 WNPNLSGNL-LSASDDHTICLWDISGSPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR---SNNTAKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 412 HSP 2 Score: 133.265 bits (334), Expect = 1.014e-32 Identity = 76/196 (38.78%), Postives = 110/196 (56.12%), Query Frame = 1
Query: 46 DDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSN-EADSIQIN---GADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
DD +EER +IWK N P +Y+L L+WPS T QWLP + E D+ +++++LGTH +E+N L+ A I N + + D+ + GA+ ++GK+ I +NH+G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D +C
Sbjct: 8 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYAVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTIC 203 HSP 3 Score: 55.4546 bits (132), Expect = 2.024e-7 Identity = 53/226 (23.45%), Postives = 88/226 (38.94%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGD--------------DVLSYDEEDRF-------PAELAM---------IHS--GHADAVTDIDWHPYLKATVASVAEDNMVNVWQI 1309
H+ +V + P I + +L++DY + + S P ++ H + LSW+P S LL+ D + LWD + K+V A +F +V V+W L E+LF S K+ IWD + LS++ F +A+ +HS H D + + W P+ + +AS D +NVW +
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGSPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTAKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
BLAST of RBBP4-1 vs. Ensembl Cavefish
Match: rbbp4 (RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:103039809]) HSP 1 Score: 175.637 bits (444), Expect = 3.912e-47 Identity = 95/233 (40.77%), Postives = 143/233 (61.37%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P+++G L + + TIC +DIS + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++++WD+ KIG++ D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 185 WNPNLSGCL-LSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 412 HSP 2 Score: 128.257 bits (321), Expect = 4.337e-31 Identity = 72/189 (38.10%), Postives = 104/189 (55.03%), Query Frame = 1
Query: 58 EERRIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRL-------PLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
EE +IWK N P +Y+L L+WPS T QWLP + E D+++++++LGTH +E+N L+ A + N D Q + + S ++GK+ I +NH+G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D +C
Sbjct: 19 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSVHRLVLGTHTSDEQNHLVIASVQLPN----DDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTIC 203 HSP 3 Score: 56.225 bits (134), Expect = 1.185e-7 Identity = 52/226 (23.01%), Postives = 85/226 (37.61%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGD--------------DVLSYDEEDRFPAELA----------------MIHS--GHADAVTDIDWHPYLKATVASVAEDNMVNVWQI 1309
H+ +V + P I + +L++DY + + S P ++ H + LSW+P S LL+ D + LWD + K+V A +F +V V+W L E+LF S K+ IWD + LS++ F +HS H D + + W P+ + +AS D +NVW +
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
BLAST of RBBP4-1 vs. Ensembl Cavefish
Match: grwd1 (glutamate rich WD repeat containing 1 [Source:NCBI gene;Acc:103032799]) HSP 1 Score: 97.4413 bits (241), Expect = 1.167e-20 Identity = 64/182 (35.16%), Postives = 92/182 (50.55%), Query Frame = 2
Query: 749 RTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTE---ASVYRVAWSPLQETLFLSAGLQHKIHIWD--VEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVA 1279
R + H VED+ W P EA +F S DQ + +WD R S S V + AH+ D N +SW+ T LL+GG DGL+ +WD R+ S V + A V V W+P+ ++F +AG + WD VE + D +D P +L +H G + V ++ WHP L T+ S A
Sbjct: 269 RPFSSHTKSVEDLQWSPTEATVFASCSVDQSIRVWDIRAPPNSMLS--VNE--AHSSDVNVISWN-RTEPFLLSGGDDGLLKVWDLRQFKSGRAVASFKQHSAPVTSVEWNPVDSSVFAAAGADDVVSQWDLSVESCDMGERANDVKD-LPPQLLFLHQGQTE-VKELHWHPQLPGTLISTA 443
BLAST of RBBP4-1 vs. Ensembl Cavefish
Match: wdr24 (WD repeat domain 24 [Source:NCBI gene;Acc:103027339]) HSP 1 Score: 66.2402 bits (160), Expect = 1.716e-10 Identity = 59/230 (25.65%), Postives = 86/230 (37.39%), Query Frame = 2
Query: 755 ITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKE--------------------------ASSSSGPVQ------------QVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQ-RKLVSALHVFDTEASVYRVAWSPLQE--TLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDW-HPYLKATVASVAEDNMVNVWQIKDS 1318
T H+ V VC+HP E ++ S D + +D R+KE AS +G VQ AH G C WHP L TGG D +V +WD ++ T ASV RV W P + S + H I++WDV + +++E H D T I W H + + S ++D+ + KD+
Sbjct: 110 FTEHKRTVNKVCFHPTEVHMLLSGSQDGFMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFAASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTNRAKEIYCVQTIASVARVKWRPERRWHLATCSMMVDHNIYVWDVRRPFIPFATFEE--------------HKDVTTGIVWRHQHDPYVLLSGSKDSTLYQHMFKDA 325 HSP 2 Score: 61.2326 bits (147), Expect = 6.207e-9 Identity = 42/176 (23.86%), Postives = 67/176 (38.07%), Query Frame = 2
Query: 782 DVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQI 1309
DV WH E N+ + + ++ W+ R + H N + +HP +LL+G DG + +D RK S SV V +S F ++ + +WD+ R P + + H V DWHP + +A+ D MV VW +
Sbjct: 73 DVMWHQMEENLLATAATNGAVVTWNLARPCRNKQE---HLFTEHKRTVNKVCFHPTEVHMLLSGSQDGFMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFAASFENGNVQLWDI--------------RRPDRYERMFTAHTGPVFCCDWHPEDRGWLATGGRDKMVKVWDM 231
BLAST of RBBP4-1 vs. Ensembl Cavefish
Match: wdr24 (WD repeat domain 24 [Source:NCBI gene;Acc:103027339]) HSP 1 Score: 66.2402 bits (160), Expect = 1.822e-10 Identity = 59/230 (25.65%), Postives = 86/230 (37.39%), Query Frame = 2
Query: 755 ITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKE--------------------------ASSSSGPVQ------------QVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQ-RKLVSALHVFDTEASVYRVAWSPLQE--TLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDW-HPYLKATVASVAEDNMVNVWQIKDS 1318
T H+ V VC+HP E ++ S D + +D R+KE AS +G VQ AH G C WHP L TGG D +V +WD ++ T ASV RV W P + S + H I++WDV + +++E H D T I W H + + S ++D+ + KD+
Sbjct: 110 FTEHKRTVNKVCFHPTEVHMLLSGSQDGFMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFAASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTNRAKEIYCVQTIASVARVKWRPERRWHLATCSMMVDHNIYVWDVRRPFIPFATFEE--------------HKDVTTGIVWRHQHDPYVLLSGSKDSTLYQHMFKDA 325 HSP 2 Score: 61.6178 bits (148), Expect = 4.377e-9 Identity = 42/176 (23.86%), Postives = 67/176 (38.07%), Query Frame = 2
Query: 782 DVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQI 1309
DV WH E N+ + + ++ W+ R + H N + +HP +LL+G DG + +D RK S SV V +S F ++ + +WD+ R P + + H V DWHP + +A+ D MV VW +
Sbjct: 73 DVMWHQMEENLLATAATNGAVVTWNLARPCRNKQE---HLFTEHKRTVNKVCFHPTEVHMLLSGSQDGFMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFAASFENGNVQLWDI--------------RRPDRYERMFTAHTGPVFCCDWHPEDRGWLATGGRDKMVKVWDM 231
BLAST of RBBP4-1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008002.1 (pep scaffold:Pmarinus_7.0:GL477852:421:9512:1 gene:ENSPMAG00000007189.1 transcript:ENSPMAT00000008002.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 175.252 bits (443), Expect = 1.048e-47 Identity = 93/233 (39.91%), Postives = 144/233 (61.80%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEA-SVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P+++G L + + T+C +DIS + + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ +++V WSP ET+ S+G ++++WD+ KIG++ + D ED P EL +H GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 185 WNPNLSGHL-LSASDDHTVCLWDISGTPREGKVVEAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADQTVALWDLRNLKLKLHSFESHRDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQAAEDVEDG-PPELLFVHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 412 HSP 2 Score: 126.331 bits (316), Expect = 4.761e-31 Identity = 74/199 (37.19%), Postives = 106/199 (53.27%), Query Frame = 1
Query: 46 DDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRLPLNG-------KLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
DD +EER +IWK N P +Y+L L+WPS T QWLP + E D+++++++LGTH +E+N L+ A + N D Q + + S G K+ + +NH+G+VNRARYMPQN I+ATK+ + ++ G C L L GH EGYG+SWN + G LL+ S D VC
Sbjct: 9 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSVHRLILGTHTSDEQNHLVIASVQLPN----DDAQFDASHYDSEKGEFGGFGSVGTKIEVEIKINHEGEVNRARYMPQNPYIIATKTPTSEVLVFDYTKHPSVPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTVC 203 HSP 3 Score: 56.9954 bits (136), Expect = 1.406e-8 Identity = 47/196 (23.98%), Postives = 81/196 (41.33%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRR----KEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P I + +L++DY + + S P ++ H + LSW+P S LL+ D V LWD + K+V A +F +V V+W L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 122 NHEGEVNRARYMPQNPYIIATKTPTSEVLVFDYTKHPSVPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTVCLWDISGTPREGKVVEAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD------------AHTAEVNCLSFNPYSEFILATGSADQTVALWDLRN 305
BLAST of RBBP4-1 vs. Ensembl Sea Lamprey
Match: WDR33 (WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]) HSP 1 Score: 60.8474 bits (146), Expect = 1.806e-9 Identity = 44/195 (22.56%), Postives = 78/195 (40.00%), Query Frame = 2
Query: 731 STLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADG--LVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQI 1309
S +N + H++ + + + P + N F + DD + +WD+ R + + H D C+ WHP T LL++G D + WD + S + + +V V W+ L+A H ++D+ + ++V I GH T + WHP + AS D + W +
Sbjct: 190 SNMNNVKMFQAHKEPIREASFAPTD-NKFATCSDDGTVRVWDFMRCHEE------RILRGHGADVKCVDWHP-TKGLLVSGSKDSQQPIKFWDPKSGHSLATLHAHKNTVMEVKWN-QNGNWLLTASRDHLCKLFDIRNLKEEV--------------QIFRGHKKEATAVAWHPIHEGFFASGGSDGSLLFWHV 361
BLAST of RBBP4-1 vs. Ensembl Sea Lamprey
Match: WDR33 (WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]) HSP 1 Score: 60.8474 bits (146), Expect = 1.827e-9 Identity = 44/195 (22.56%), Postives = 78/195 (40.00%), Query Frame = 2
Query: 731 STLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADG--LVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQI 1309
S +N + H++ + + + P + N F + DD + +WD+ R + + H D C+ WHP T LL++G D + WD + S + + +V V W+ L+A H ++D+ + ++V I GH T + WHP + AS D + W +
Sbjct: 190 SNMNNVKMFQAHKEPIREASFAPTD-NKFATCSDDGTVRVWDFMRCHEE------RILRGHGADVKCVDWHP-TKGLLVSGSKDSQQPIKFWDPKSGHSLATLHAHKNTVMEVKWN-QNGNWLLTASRDHLCKLFDIRNLKEEV--------------QIFRGHKKEATAVAWHPIHEGFFASGGSDGSLLFWHV 361
BLAST of RBBP4-1 vs. Ensembl Sea Lamprey
Match: pwp1 (PWP1 homolog, endonuclein [Source:ZFIN;Acc:ZDB-GENE-040426-1049]) HSP 1 Score: 55.0694 bits (131), Expect = 3.670e-8 Identity = 44/186 (23.66%), Postives = 77/186 (41.40%), Query Frame = 2
Query: 752 TITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQI 1309
T GH D V D+ W+ N+ S D +++WD + + +++ + H A + WHP + L++G D V L+D R + ++ V RV W+ FL++ DD Y + R + + + H +AVT + +K + + + D V VW I
Sbjct: 57 TSEGHTDAVLDLSWNHNARNVLASASADHTVILWDLVQGKVATT------LEQHTDKAQTVEWHPFEAQTLISGSYDKSVVLYDCRSPSDSHRMWRFSGEVERVTWNHFSPFHFLAS--------------TDDGFVYCLDARSDKSVFTLQA-HEEAVTGLVLSSQVKGCLVTSSADKHVKVWDI 221
BLAST of RBBP4-1 vs. Ensembl Sea Lamprey
Match: pex7 (peroxisomal biogenesis factor 7 [Source:ZFIN;Acc:ZDB-GENE-050320-105]) HSP 1 Score: 54.299 bits (129), Expect = 7.134e-8 Identity = 43/184 (23.37%), Postives = 69/184 (37.50%), Query Frame = 2
Query: 767 QDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTS-CLLLTGGADGLVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
D + DV W ++ + D L +WD AS GP++ H + + W L+++G D +WD L S E VY WSP + F SA + +WDV+ P ++ H + V DW Y + + S A D + W +++
Sbjct: 67 NDSLFDVAWSEDNEHVLVTGSGDGSLQLWD-----ASQPEGPLRVYQGHTKEVYSVDWSQTRGENLVVSGSWDHTARVWDPAFLSSLAEYRGHEGVVYSTVWSPHIPSCFASASGDQTLRVWDVKS--------------PHAARIVIPAHQEEVLSCDWCKYDQNLLVSAAVDCGIRGWDLRN 231 HSP 2 Score: 49.2914 bits (116), Expect = 3.074e-6 Identity = 32/127 (25.20%), Postives = 49/127 (38.58%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALH-VFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVE 1138
GH+ V W P + F S DQ L +WD + A+ P AH + W LL++ D + WD R + + + ++ RV SP Q T+ S + WD +
Sbjct: 153 GHEGVVYSTVWSPHIPSCFASASGDQTLRVWDVKSPHAARIVIP-----AHQEEVLSCDWCKYDQNLLVSAAVDCGIRGWDLRNIRQPVFSLLGHSYAIRRVRCSPFQPTVLASCSYDFSVRFWDFQ 274
BLAST of RBBP4-1 vs. Ensembl Yeast
Match: HAT2 (Subunit of the Hat1p-Hat2p histone acetyltransferase complex; required for high affinity binding of the complex to free histone H4, thereby enhancing Hat1p activity; similar to human RbAp46 and 48; has a role in telomeric silencing [Source:SGD;Acc:S000000782]) HSP 1 Score: 106.301 bits (264), Expect = 8.266e-25 Identity = 69/175 (39.43%), Postives = 96/175 (54.86%), Query Frame = 1
Query: 58 EERRIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHEDHTIYK--ILLGTH-ADEEENKLIYADYIISN---SNEADSIQINGADNKSRLPL-NGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIYSDGNCLL-TLSGHSDEGYGISWNQQVEGRLLTCSFDQVC 558
EE +WK N PLMY+ L WPS T QWLP + D K +++GTH + EEEN L +A+ + SNE D + G + +S LP + IT H+ ++ RARYMPQ+ +IVAT + + F+YS L TL H D GY +S++ V+GRLL+ S D
Sbjct: 12 EEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLPTPVQELDGGFIKQELIIGTHTSGEEENYLKFAEINLPKEILSNE-DPQEEAGEEYQSSLPAPRSNIRITAKYEHEEEITRARYMPQDPNIVATINGQGTVFLYSRSEGLQSTLKFHKDNGYALSFSTLVKGRLLSGSDDHTV 185 HSP 2 Score: 96.2857 bits (238), Expect = 1.736e-21 Identity = 63/202 (31.19%), Postives = 103/202 (50.99%), Query Frame = 2
Query: 722 AGGSTLNPARTITG-HQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALH-VFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSI 1321
+GG P RT H D + D WH ++FG+V +D L I D R + + Q N L++ +S LL G D V+L+D R + LH + E +V + +S + + +S+G +++ +WD+++IG + D ED P EL M+H+GH +V D D +P + VAS E+N++ VW+ S+
Sbjct: 192 SGGDPTKPVRTWNDLHSDIINDNKWHNFNKDLFGTVSEDSLLKINDVRANNTTIDTVKCPQPF------NTLAFSHHSSNLLAAAGMDSYVYLYDLRNMKEPLHHMSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVP-ELIMVHAGHRSSVNDFDLNPQIPWLVASAEEENILQVWKCSHSL 386
BLAST of RBBP4-1 vs. Ensembl Yeast
Match: RRB1 (Specific chaperone for ribosomal protein Rpl3p; binds to nascent Rpl3p during translation; essential gene [Source:SGD;Acc:S000004738]) HSP 1 Score: 69.3218 bits (168), Expect = 1.681e-12 Identity = 49/191 (25.65%), Postives = 83/191 (43.46%), Query Frame = 2
Query: 776 VEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKL-------VSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDV------EKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQ 1306
+ED+ W E+ +F + G D + IWD R K+ P V A D N +SW LL +G +G +WD R+ V + +D + ++ +A++PL E++ + + +WD+ E+I E P +L +H V D+ WH + + S D + NVW+
Sbjct: 324 IEDIQWSRTESTVFATAGCDGYIRIWDTRSKKHK----PAISVKASNTDVNVISWSDKIGYLLASGDDNGTWGVWDLRQFTPSNADAVQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVTLWDLSVEADDEEIKQQAAETKELQEIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGTDGL-NVWK 507
BLAST of RBBP4-1 vs. Ensembl Yeast
Match: MSI1 (Subunit of chromatin assembly factor I (CAF-1); chromatin assembly by CAF-1 affects multiple processes including silencing at telomeres, mating type loci, and rDNA; maintenance of kinetochore structure; deactivation of DNA damage checkpoint after DNA repair; chromatin dynamics during transcription; and repression of divergent noncoding transcription; Msi1p localizes to nucleus and cytoplasm and independently regulates the RAS/cAMP pathway via sequestration of Npr1p kinase [Source:SGD;Acc:S000000399]) HSP 1 Score: 64.3142 bits (155), Expect = 5.202e-11 Identity = 48/190 (25.26%), Postives = 80/190 (42.11%), Query Frame = 2
Query: 743 PARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKL-VSALHVFDTEASVYRVAWSPLQETLFLSAGLQHK-IHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQ 1306
P +I V DV W P ++F + + + + D R K+ S + H G N ++ S +L + ++G ++LWD R + S + + SV + WSP +T+ +AG + + +WD E H GH V DI W + + SVA DN V++W+
Sbjct: 243 PLVSINSDGTAVNDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNREK----HDGGVNSCRFNYKNSLILASADSNGRLNLWDIRNMNKSPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGLVKLWDTS---------------CEETIFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIWK 413 HSP 2 Score: 59.3066 bits (142), Expect = 1.656e-9 Identity = 42/143 (29.37%), Postives = 69/143 (48.25%), Query Frame = 1
Query: 49 DTIEERRIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHEDHTIYKILLG--THADEEENKLIYADYIIS---------NSNEADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY 444
D E WK N L+Y+ + ++ WPS TCQ+ P + D ++ILL T + + E++ IY I + N+ + D ++ +N +R P + G+ NRARY+PQN I+A SS+ +I+
Sbjct: 18 DLQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE--HRILLSSFTSSQKPEDETIYISKISTLGHIKWSSLNNFDMDEMEFK-PENSTRFPSKHLVNDISIFFPNGECNRARYLPQNPDIIAGASSDGAIYIF 157
BLAST of RBBP4-1 vs. Ensembl Yeast
Match: SEC13 (Structural component of 3 complexes; subunit of the Nup84p nuclear pore subcomplex that contributes to nucleocytoplasmic transport and NPC biogenesis; subunit of the COPII vesicle coat required for ER-to-Golgi transport; subunit of SEACAT, a subcomplex of the coatomer-related, vacuolar-associated SEA complex, that inhibits the TORC1 inhibitory role of SEACIT (Iml1p-Npr2p-Npr3p), a GAP for Gtr1p, thereby resulting in activation of TORC1 signaling; human SEC13 homolog [Source:SGD;Acc:S000004198]) HSP 1 Score: 55.0694 bits (131), Expect = 2.040e-8 Identity = 57/222 (25.68%), Postives = 89/222 (40.09%), Query Frame = 2
Query: 692 TICAFDISQSAGGSTLNPARTITGHQDKVEDVCW-HPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHP-VTSCLLLTGGADGLVHL--WDQRKLVSALHVFDTEASVYRVAWSPL------------QETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHP--YLKATVASVAEDNMVNVW 1303
TI F++ G T T+TGH+ V V W HP I S D ++LIW KE + + H+ N + W P LLL +DG V + + + S + + V +W+P + F++ G + + IW K D +Y E GH+D V D+ W P L++ +ASV++D +W
Sbjct: 32 TIKIFEVE----GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW----KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW---KYNSDAQTYVLESTL--------EGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW 234
BLAST of RBBP4-1 vs. Ensembl Yeast
Match: PRP4 (Splicing factor; component of the U4/U6-U5 snRNP complex [Source:SGD;Acc:S000006382]) HSP 1 Score: 50.447 bits (119), Expect = 1.272e-6 Identity = 52/204 (25.49%), Postives = 81/204 (39.71%), Query Frame = 2
Query: 695 ICAFDISQSAGGSTLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKA-TVASVAEDNMVNVW 1303
I F S GG L + GH+ ++ DV +HP+ GS D +WD +S+ + H LS+ L+ +GG D L LWD R + + +Y VAWSP + G I++WD+ K R +L I + H + VT + + + S DN++NV+
Sbjct: 243 IKNFQYSNEEGG--LRLLGDLVGHERRISDVKYHPS-GKFIGSASHDMTWRLWD------ASTHQELLLQEGHDKGVFSLSFQ-CDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSP-NGYQVATGGGDGIINVWDIRK------------RDEGQLNQILA-HRNIVTQVRFSKEDGGKKLVSCGYDNLINVY 422
BLAST of RBBP4-1 vs. Ensembl Nematostella
Match: EDO42058 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S2K4]) HSP 1 Score: 176.022 bits (445), Expect = 9.659e-48 Identity = 95/234 (40.60%), Postives = 141/234 (60.26%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQ--SAGGSTLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P+V G L + + TIC +DIS S T++ R TGH VEDV WH ++FGSV DD +L+IWD R+ ++S+ V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++H+WD+ KIG++ + D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 170 WNPNVNGNL-LSASDDHTICLWDISSGISKEQKTVDAMRIFTGHSAVVEDVSWHLLHESLFGSVADDHKLMIWDTRQ---TNSNKAAHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVLCSVSEDNIMQVWQMAENIYNDE 398 HSP 2 Score: 129.798 bits (325), Expect = 3.964e-32 Identity = 72/186 (38.71%), Postives = 108/186 (58.06%), Query Frame = 1
Query: 58 EERRIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRL----PLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
EE +IWK N P +Y+L L+WPS T QWLP K E D+++++++LGTH +E+N ++ A + N +EA + ++K ++GK+ I +NH+G+VNRAR+MPQN I+ATK+ D ++ +G C L L GH+ EGYG+SWN V G LL+ S D +C
Sbjct: 4 EEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTKPEGKDYSVHRLILGTHTSDEQNHVVIASVQLPN-DEAQFDASHYDNDKGEFGGFASVSGKIDIEIKINHEGEVNRARFMPQNPCIIATKTPSADVLVFDYTKHPSKPDPNGECSPDLRLKGHTKEGYGLSWNPNVNGNLLSASDDHTIC 188 HSP 3 Score: 61.2326 bits (147), Expect = 1.083e-9 Identity = 45/197 (22.84%), Postives = 85/197 (43.15%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD-------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H+ +V + P I + +L++DY + + + P ++ H + LSW+P + LL+ D + LWD ++K V A+ +F ++V V+W L E+LF S HK+ IWD + + + A H V + ++PY + +A+ + D V +W +++
Sbjct: 107 NHEGEVNRARFMPQNPCIIATKTPSADVLVFDYTKHPSKPDPNGECSPDLRLKGHTKEGYGLSWNPNVNGNLLSASDDHTICLWDISSGISKEQKTVDAMRIFTGHSAVVEDVSWHLLHESLFGSVADDHKLMIWDTRQTNSN------------KAAHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 291
BLAST of RBBP4-1 vs. Ensembl Nematostella
Match: EDO34980 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SMS9]) HSP 1 Score: 88.9669 bits (219), Expect = 1.599e-18 Identity = 59/191 (30.89%), Postives = 90/191 (47.12%), Query Frame = 2
Query: 725 GGSTLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVS---ALHVFD-TEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEED-RFPAELAMIHSGHADAVTDIDWHPYLKATVASVAE 1282
GGS R H D VEDV W P E N+F S D+ + IWD R A S + AH D N +SW+ +++GG DG++ +WD R+L + +F + + V W P ++F ++ ++I +WD+ D+ P +L IH G D + ++ WHP L + S AE
Sbjct: 221 GGSWHVDQRPFNAHTDSVEDVQWSPNENNVFASCSVDKTIRIWDAR---AMPSKACMISTNAHDADVNVISWN-RNEPFIVSGGDDGILKVWDLRQLQKQGQPVALFKHSTGPITSVEWHPTDGSVFAASSADNQITLWDLAVERDEAAEGPGRHLDVPPQLLFIHMGQKD-IKELHWHPQLPGVLISTAE 406
BLAST of RBBP4-1 vs. Ensembl Nematostella
Match: EDO45890 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RRV3]) HSP 1 Score: 68.9366 bits (167), Expect = 4.794e-12 Identity = 38/147 (25.85%), Postives = 65/147 (44.22%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGL--QHKIHIWDVEKIGDDVLSYDEEDRFPAEL 1195
G + + D+ + P + F + D+ + +WD RR + Q +AH G L WHP + TGG D V +WD + + ++ T +SV R+ W P ++ S L IH+WD+ + ++ E P +
Sbjct: 142 GKSESIRDIEFSPFDGKQFATACDNGNVQLWDMRRTDTY-----YHQFMAHNGPVFTLDWHPEDRNWIATGGRDKCVKVWDVQGKATPVNNIQTISSVSRIKWRPQKKYQIASCALLVDFDIHVWDIRRPYIPYATFSEHKDVPTGI 283 HSP 2 Score: 67.781 bits (164), Expect = 1.266e-11 Identity = 45/181 (24.86%), Postives = 79/181 (43.65%), Query Frame = 2
Query: 776 VEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVV--AHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIK 1312
+ DV WHP E +I + + ++IW+ + Q++V H N + +HP + LLL+G DG ++ +D RK S+ + +SP F +A + +WD+ + D + + M H+G V +DWHP + +A+ D V VW ++
Sbjct: 58 ITDVQWHPVEDHILATAAGNGAVVIWNLNKITKQK-----QELVFYEHKRTVNRIKFHPQDTTLLLSGSQDGTMNCFDIRKQSVLFSAHGKSESIRDIEFSPFDGKQFATACDNGNVQLWDMRRT----------DTYYHQF-MAHNG---PVFTLDWHPEDRNWIATGGRDKCVKVWDVQ 219
BLAST of RBBP4-1 vs. Ensembl Nematostella
Match: EDO38818 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBS0]) HSP 1 Score: 60.8474 bits (146), Expect = 1.120e-9 Identity = 48/187 (25.67%), Postives = 72/187 (38.50%), Query Frame = 2
Query: 755 ITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEA-SVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIK 1312
TGHQ+ V W P F S DQ + IWD + P Q + AH G+ W L+++G D L+ WD R + + F +V R+ SP Q + S I WD A L I H++ T +D++ + +A + D MV V+ +
Sbjct: 145 FTGHQNVVYSSIWSPHIPRTFASASGDQHIGIWD-----MACPGRPQQLIRAHEGEVLTCDWAKYDQHLVVSGSVDTLIKGWDVRNTNAPVFSFKAHPYAVRRLKCSPHQGNIIASCSYDFTIKTWDTTST-------------LAPLETIEH-HSEFATGLDFNIHQPGQIADCSFDGMVTVYSPR 312
BLAST of RBBP4-1 vs. Ensembl Nematostella
Match: EDO39456 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S9W6]) HSP 1 Score: 57.7658 bits (138), Expect = 8.479e-9 Identity = 58/209 (27.75%), Postives = 90/209 (43.06%), Query Frame = 2
Query: 752 TITGHQDKVEDVCW-HPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGA-DGLVHL--------WDQRKLVSALHVFDTEASVYRVAWSPLQ------------ETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYL---KATVASVAEDNMVNVW 1303
T+ GH V V W HP N+ S D++++IW KE+SS +Q+ H N + W P L+L GA DG V + W+ +K+ +A H A + A +P E F++ G + + IW E G + EE + A H+D V D+ W P + +T+AS ++D V +W
Sbjct: 52 TLRGHDGPVWQVSWSHPMFGNLLASCSYDRKVIIW----KESSSGWVKLQEFCNHDSSVNSICWAPHEYGLMLACGASDGSVSIISSPGDGTWETKKISNA-HTIGCNAVSWAPAVTPGSILEHPASKSSNLEKRFVTGGCDNLVKIWR-ETGGQ----WVEEQKLEA--------HSDWVRDVAWAPNVGLPTSTIASCSQDCRVIIW 242
BLAST of RBBP4-1 vs. Ensembl Medaka
Match: rbbp4 (RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:101155071]) HSP 1 Score: 176.022 bits (445), Expect = 3.470e-47 Identity = 95/233 (40.77%), Postives = 143/233 (61.37%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P+++G L + + TIC +DIS + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R ++++S P V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++++WD+ KIG++ D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 185 WNPNLSGCL-LSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG-PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 412 HSP 2 Score: 128.642 bits (322), Expect = 4.001e-31 Identity = 72/189 (38.10%), Postives = 104/189 (55.03%), Query Frame = 1
Query: 58 EERRIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRL-------PLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
EE +IWK N P +Y+L L+WPS T QWLP + E D+++++++LGTH +E+N L+ A + N D Q + + S ++GK+ I +NH+G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D +C
Sbjct: 19 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSVHRLVLGTHTSDEQNHLVIASVQLPN----DDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTIC 203 HSP 3 Score: 56.225 bits (134), Expect = 1.168e-7 Identity = 52/226 (23.01%), Postives = 85/226 (37.61%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDY----RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGD--------------DVLSYDEEDRFPAELA----------------MIHS--GHADAVTDIDWHPYLKATVASVAEDNMVNVWQI 1309
H+ +V + P I + +L++DY + + S P ++ H + LSW+P S LL+ D + LWD + K+V A +F +V V+W L E+LF S K+ IWD + LS++ F +HS H D + + W P+ + +AS D +NVW +
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
BLAST of RBBP4-1 vs. Ensembl Medaka
Match: rbb4l (histone-binding protein RBBP7 [Source:NCBI gene;Acc:101156710]) HSP 1 Score: 172.555 bits (436), Expect = 9.960e-46 Identity = 94/233 (40.34%), Postives = 140/233 (60.09%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+P+++G L + + TIC +DI + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R S +S V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++++WD+ KIG++ + D ED P EL IH GH ++D W+P + SV+EDN++ VWQ+ ++I+ DE
Sbjct: 222 WNPNLSGNL-LSASDDHTICLWDIGAGPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKAS---HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG-PPELLFIHGGHTAKISDFSWNPGEPWIICSVSEDNIMQVWQMAENIYNDE 449 HSP 2 Score: 132.109 bits (331), Expect = 5.200e-32 Identity = 76/201 (37.81%), Postives = 111/201 (55.22%), Query Frame = 1
Query: 46 DDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSN-EADSIQIN---GADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC*CHVG 573
DD +EER +IWK N P +Y+L L+WPS T QWLP + E D+ +++++LGTH +E+N L+ A + N + + D+ + GA+ ++GK+ I +NH G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D +C +G
Sbjct: 45 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYAVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPAKPDPSGECSPDLRLKGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDIG 245 HSP 3 Score: 55.8398 bits (133), Expect = 2.094e-7 Identity = 47/196 (23.98%), Postives = 80/196 (40.82%), Query Frame = 2
Query: 761 GHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEA----SSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H +V + P I + +L++DY + A S P ++ H + LSW+P S LL+ D + LWD + K+V A +F +V V+W L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 159 NHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPAKPDPSGECSPDLRLKGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKASHSVD------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 342
BLAST of RBBP4-1 vs. Ensembl Medaka
Match: rbb4l (histone-binding protein RBBP7 [Source:NCBI gene;Acc:101156710]) HSP 1 Score: 152.525 bits (384), Expect = 8.877e-39 Identity = 91/250 (36.40%), Postives = 134/250 (53.60%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTI-TGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEED------------------------RFPAEL-AMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQI 1309
W+P+++G L + + TIC +DI + A+TI TGH VEDV WH ++FGSV DDQ+L+IWD R S +S V AH + NCLS++P + +L TG AD V LWD R L LH F++ + +++V WSP ET+ S+G ++++WD+ KIG++ + D ED FP L IH GH ++D W+P + SV+EDN++ VWQ+
Sbjct: 222 WNPNLSGNL-LSASDDHTICLWDIGAGPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKAS---HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLVGPLASRLVGGLLKVLMWSFPVVLHQFIHGGHTAKISDFSWNPGEPWIICSVSEDNIMQVWQM 467 HSP 2 Score: 132.494 bits (332), Expect = 4.032e-32 Identity = 76/201 (37.81%), Postives = 111/201 (55.22%), Query Frame = 1
Query: 46 DDTIEER------RIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHE--DHTIYKILLGTHADEEENKLIYADYIISNSN-EADSIQIN---GADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIY----------SDGNCL--LTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC*CHVG 573
DD +EER +IWK N P +Y+L L+WPS T QWLP + E D+ +++++LGTH +E+N L+ A + N + + D+ + GA+ ++GK+ I +NH G+VNRARYMPQN I+ATK+ D ++ G C L L GH EGYG+SWN + G LL+ S D +C +G
Sbjct: 45 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYAVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPAKPDPSGECSPDLRLKGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDIG 245 HSP 3 Score: 55.8398 bits (133), Expect = 1.948e-7 Identity = 47/195 (24.10%), Postives = 80/195 (41.03%), Query Frame = 2
Query: 764 HQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEA----SSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWD------QRKLVSALHVFDTEASVYR-VAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKD 1315
H +V + P I + +L++DY + A S P ++ H + LSW+P S LL+ D + LWD + K+V A +F +V V+W L E+LF S K+ IWD S+ + H V + ++PY + +A+ + D V +W +++
Sbjct: 160 HDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPAKPDPSGECSPDLRLKGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKASHSVD------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 342
BLAST of RBBP4-1 vs. Ensembl Medaka
Match: grwd1 (glutamate rich WD repeat containing 1 [Source:NCBI gene;Acc:101163517]) HSP 1 Score: 95.1301 bits (235), Expect = 5.983e-20 Identity = 60/183 (32.79%), Postives = 91/183 (49.73%), Query Frame = 2
Query: 749 RTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEAS--SSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTE---ASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDR-FPAELAMIHSGHADAVTDIDWHPYLKATVASVA 1279
R + H VED+ W P EA +F S DQ + +WD R S S G AHA D N +SW+ + LL+GG DGL+ +WD R+ + V + + A + V WSP ++F ++G I WD+ DV + E + P +L +H G ++ + +I WHP + + S A
Sbjct: 261 RPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRVWDIRAPPNSMLSVDG------AHASDINVISWN-RSEPFLLSGGDDGLLKVWDLRQFKTGRAVANFKQHSAPITSVEWSPADSSVFAASGADDVISQWDLSVESSDVGARVEGLKDLPPQLLFLHQGQSE-IKEIHWHPQIPGVMISTA 435 HSP 2 Score: 52.373 bits (124), Expect = 2.166e-6 Identity = 39/159 (24.53%), Postives = 69/159 (43.40%), Query Frame = 2
Query: 860 RRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHV----FDTEA-SVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWH---PYLKATVASVAEDNMVNVWQIK 1312
++KEA P+ H + + W P L++G +H+W+ R+ SA + F + + SV + WSP + T+F S + I +WD+ + +LS D HA + I W+ P+L S +D ++ VW ++
Sbjct: 205 QQKEAK----PLFSFSGHMSEGFAIDWSPKAPGRLVSGDCKKNIHVWEPREGGSAWQIDQRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRVWDIRAPPNSMLSVD-------------GAHASDINVISWNRSEPFL----LSGGDDGLLKVWDLR 342
BLAST of RBBP4-1 vs. Ensembl Medaka
Match: wdr24 (WD repeat domain 24 [Source:NCBI gene;Acc:101163207]) HSP 1 Score: 65.855 bits (159), Expect = 2.324e-10 Identity = 58/232 (25.00%), Postives = 85/232 (36.64%), Query Frame = 2
Query: 755 ITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKE-------------------------ASSSSGPVQ------------QVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQ-RKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQ--HKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWH----PYLKATVASVAEDNMVNVWQIKDS 1318
T H+ V VC+HP E + S D + +D R+KE AS +G VQ AH G C WHP L TGG D +V +WD ++ T ASV RV W P + + + H I++WD+ + +++E H D T I W PY + S ++D+ + KD+
Sbjct: 116 FTEHKRTVNKVCFHPTEVYMLLSGSQDGLMKCFDLRKKESVSTFSGQSESVRDVQFSMKDFTFAASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPDDRGWLATGGRDKMVKVWDMTTNRAKEIYCVQTIASVARVKWRPEKRFHLATCSMMVDHNIYVWDIRRPFIPFATFEE--------------HKDVTTGIVWRHQHDPYF---LLSGSKDSTLYQHMFKDA 330 HSP 2 Score: 64.6994 bits (156), Expect = 4.555e-10 Identity = 44/176 (25.00%), Postives = 73/176 (41.48%), Query Frame = 2
Query: 782 DVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQI 1309
DV WH E N+ + + ++ W+ + S + Q H N + +HP +LL+G DGL+ +D RK S SV V +S +++ F ++ + +WD+ R P + + H V DWHP + +A+ D MV VW +
Sbjct: 79 DVMWHQMEENLLATAATNGAVVTWNLGK---PSRNKQDQLFTEHKRTVNKVCFHPTEVYMLLSGSQDGLMKCFDLRKKESVSTFSGQSESVRDVQFS-MKDFTFAASFENGNVQLWDI--------------RRPDRYERMFTAHTGPVFCCDWHPDDRGWLATGGRDKMVKVWDM 236
BLAST of RBBP4-1 vs. Planmine SMEST
Match: SMESG000037114.1 (SMESG000037114.1) HSP 1 Score: 441.81 bits (1135), Expect = 4.868e-145 Identity = 218/231 (94.37%), Postives = 221/231 (95.67%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+ V G L + + TICAFDISQSAGGSTLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE
Sbjct: 157 WNQQVEGRL-LTCSFDQTICAFDISQSAGGSTLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 386 HSP 2 Score: 362.459 bits (929), Expect = 6.612e-115 Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 1
Query: 37 MMNDDTIEERRIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHEDHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIYSDGNCLLTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC*CHVGFRFGG 588
MMNDDTIEERRIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHEDHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIYSDGNCLLTLSGHSDEGYGISWNQQVEGRLLTCSFDQ +C + GG
Sbjct: 1 MMNDDTIEERRIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHEDHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIYSDGNCLLTLSGHSDEGYGISWNQQVEGRLLTCSFDQTICAFDISQSAGG 185
BLAST of RBBP4-1 vs. Planmine SMEST
Match: SMESG000037114.1 (SMESG000037114.1) HSP 1 Score: 441.425 bits (1134), Expect = 5.938e-145 Identity = 218/231 (94.37%), Postives = 221/231 (95.67%), Query Frame = 2
Query: 641 WSPHVTG*LPVYLLIN*TICAFDISQSAGGSTLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 1333
W+ V G L + + TICAFDISQSAGGSTLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE
Sbjct: 156 WNQQVEGRL-LTCSFDQTICAFDISQSAGGSTLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDTEASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFADE 385 HSP 2 Score: 359.377 bits (921), Expect = 7.254e-114 Identity = 174/184 (94.57%), Postives = 176/184 (95.65%), Query Frame = 1
Query: 40 MNDDTIEERRIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHEDHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIYSDGNCLLTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC*CHVGFRFGG 588
MNDDTIEERRIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHEDHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIYSDGNCLLTLSGHSDEGYGISWNQQVEGRLLTCSFDQ +C + GG
Sbjct: 1 MNDDTIEERRIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHEDHTIYKILLGTHADEEENKLIYADYIISNSNEADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIYSDGNCLLTLSGHSDEGYGISWNQQVEGRLLTCSFDQTICAFDISQSAGG 184
BLAST of RBBP4-1 vs. Planmine SMEST
Match: SMESG000037115.1 (SMESG000037115.1) HSP 1 Score: 305.834 bits (782), Expect = 2.966e-93 Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 1
Query: 2968 STGNPDTKISELSRHLQICINSQDRHYNIVLLALHLNDIFKTRLTVQGTGIATKIKKCICSVFCFWFGKRFGNFLVGLYLFVKFLYSLNIFGQLILMNTYLGTNYTLYGIHLLLDISSGRSWQESGNFPRVTICDFTIHKLANTHKYTVQCVLP 3429
+G T+ISELSRHLQICINSQDRHYNIVLLALHLNDIFKTRLTVQGTGIATKIKKCICSVFCFWFGKRFGNFLVGLYLFVKFLYSLNIFGQLILMNTYLGTNYTLYGIHLLLDISSGRSWQESGNFPRVTICDFTIHKLANTHKYTVQCVLP
Sbjct: 88 QSGYQVTRISELSRHLQICINSQDRHYNIVLLALHLNDIFKTRLTVQGTGIATKIKKCICSVFCFWFGKRFGNFLVGLYLFVKFLYSLNIFGQLILMNTYLGTNYTLYGIHLLLDISSGRSWQESGNFPRVTICDFTIHKLANTHKYTVQCVLP 241 HSP 2 Score: 201.445 bits (511), Expect = 4.552e-56 Identity = 97/106 (91.51%), Postives = 99/106 (93.40%), Query Frame = 3
Query: 2715 MIISARQYIGKPISCWVPAEFTRSQEEYTESVCWVTSTYFLPNSTISNDNERRNVTKLTYYQWVPFILIAQAALFYIPCLVWRMFNWQSGYQDIRAISPLADLYQL 3032
MIISARQYIGKPISCWVPAEFTRSQEEYTESVCWVTSTYFLPNSTISNDNERRNVTKLTYYQWVPFILIAQAALFYIPCLVWRMFNWQSGYQ R IS L+ Q+
Sbjct: 1 MIISARQYIGKPISCWVPAEFTRSQEEYTESVCWVTSTYFLPNSTISNDNERRNVTKLTYYQWVPFILIAQAALFYIPCLVWRMFNWQSGYQVTR-ISELSRHLQI 105
BLAST of RBBP4-1 vs. Planmine SMEST
Match: SMESG000055266.1 (SMESG000055266.1) HSP 1 Score: 110.538 bits (275), Expect = 3.501e-47 Identity = 54/127 (42.52%), Postives = 80/127 (62.99%), Query Frame = 1
Query: 3049 NIVLLALHLNDIFKTRLTVQGTGIATKIKKCICSVFCFWFGKRFGNFLVGLYLFVKFLYSLNIFGQLILMNTYLGTNYTLYGIHLLLDISSGRSWQESGNFPRVTICDFTIHKLANTHKYTVQCVLP 3429
+I +A+H++ K R + GTG K K+ + V + GN+L +Y+ +K LY LN+ GQL LM ++GT+Y+ YGI +L D+ +G W++SG+FPR+T CDF KL H YT+QCVLP
Sbjct: 147 SIKFIAIHMDKCLK-RKKIYGTGYKAKFKRLLSYVNGGCCARNSGNYLSFVYIIIKVLYLLNVVGQLYLMQRFIGTSYSFYGIQVLYDLVTGIEWRKSGHFPRITFCDFKTKKLGKNHIYTLQCVLP 272 HSP 2 Score: 98.9821 bits (245), Expect = 3.501e-47 Identity = 47/110 (42.73%), Postives = 67/110 (60.91%), Query Frame = 3
Query: 2724 SARQYIGKPISCWVPAEFTRSQEEYTESVCWVTSTYFLP-NSTISNDNERRNVTKLTYYQWVPFILIAQAALFYIPCLVWRMFNWQSGYQDIRAISPLADLYQLSRPPLQ 3050
+ +Q GKPI CW+P EFTR EEY ES CW++ TYF P + + +R++V K++YYQW +L QA LF+IPC++WR+ QSG+ R + D + LQ
Sbjct: 37 NGQQDDGKPIQCWIPQEFTRGWEEYAESYCWISDTYFNPVDRRLPKLTDRQDV-KISYYQWASIVLAVQALLFFIPCMIWRLLILQSGFNLQRIMQVAKDANAIIPDHLQ 145
BLAST of RBBP4-1 vs. Planmine SMEST
Match: SMESG000062893.1 (SMESG000062893.1) HSP 1 Score: 171.014 bits (432), Expect = 1.197e-45 Identity = 87/218 (39.91%), Postives = 129/218 (59.17%), Query Frame = 2
Query: 692 TICAFDIS----QSAGGSTLNPARTITGHQDKVEDVCWHPAEANIFGSVGDDQRLLIWDYRRKEASSSSGPVQQVVAHAGDANCLSWHPVTSCLLLTGGADGLVHLWDQRKLVSALHVFDT-EASVYRVAWSPLQETLFLSAGLQHKIHIWDVEKIGDDVLSYDEEDRFPAELAMIHSGHADAVTDIDWHPYLKATVASVAEDNMVNVWQIKDSIFAD 1330
TIC +D + S+ G +NP GH VEDV WH ++FGSV DD++L+IWD R + ++S PV +V AH + NC++++P L++TG AD V +WD R L LH F+ + +++V WSP ET+F S+G ++HIWD KIG + + D P EL IH GH ++D W+ + T+ SVAEDN++ VWQ+ D ++ D
Sbjct: 204 TICMWDTNTAGNSSSEGPYINPLMQFIGHNTVVEDVAWHLRHGDVFGSVADDKKLMIWDIR---SDNTSKPVIEVDAHTAEVNCIAFNPFNQHLVVTGSADKTVAMWDMRNLQLKLHSFEAHQDEIFQVQWSPHNETIFASSGTDRRLHIWDCSKIGLEQQEVEFVDG-PPELLFIHPGHTAKISDFSWNQFEPWTICSVAEDNILQVWQMADIMYND 417 HSP 2 Score: 122.865 bits (307), Expect = 2.298e-29 Identity = 69/184 (37.50%), Postives = 103/184 (55.98%), Query Frame = 1
Query: 58 EERRIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEK--HEDHTIYKILLGTHADEEENKLIYADYIISNSN---EADSIQINGADNKSRLPLNGKLVITKTVNHKGDVNRARYMPQNSSIVATKSSEKDSFIYS-----------DGNCLLTLSGHSDEGYGISWNQQVEGRLLTCSFDQ-VC 558
E+ +IWK + P +Y+ L+WPS T QWLP ++ +D+T+++++LGTH +E+N L+ A + N +A + D NGKL IT +NH+G+VNRARYMPQN + VATK+ D I++ + L L GH EGYG+SWN G +L+ S D+ +C
Sbjct: 23 EDYKIWKRDTPFLYDCLMVHPLEWPSLTAQWLPTIDRPNDKDYTVHRLILGTHTSDEQNHLLIASINMPNDQTEFDASAYDTERFDYGGFGFPNGKLEITMMINHEGEVNRARYMPQNETFVATKTPTADVLIFNYAIHPARPFGMEVKPELRLKGHLKEGYGLSWNPIKAGYILSASDDKTIC 206 The following BLAST results are available for this feature:
BLAST of RBBP4-1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of RBBP4-1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of RBBP4-1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of RBBP4-1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of RBBP4-1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of RBBP4-1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of RBBP4-1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of RBBP4-1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of RBBP4-1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of RBBP4-1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of RBBP4-1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of RBBP4-1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of RBBP4-1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of RBBP4-1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30017595 ID=SMED30017595|Name=RBBP4-1|organism=Schmidtea mediterranea sexual|type=transcript|length=3434bpback to top protein sequence of SMED30017595-orf-1 >SMED30017595-orf-1 ID=SMED30017595-orf-1|Name=SMED30017595-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=180bp MAEFVSLIGNMWSYPFSNVDSHFWSGLSRLKVDSQKYECDLSDWLNYSCSback to top protein sequence of SMED30017595-orf-2 >SMED30017595-orf-2 ID=SMED30017595-orf-2|Name=SMED30017595-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=175bp MMNDDTIEERRIWKINCPLMYNLAHFDTLDWPSFTCQWLPFEEKHEDHTIback to top Aliases
The feature 'RBBP4-1' has the following synonyms
Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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