Ras-related protein Rab-1B, putative

Overview


Name	Ras-related protein Rab-1B, putative
Smed ID	SMED30017581
Length (bp)	683

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Ras-related protein Rab-1B, putative (SMED30017581) t-SNE clustered cells

Violin plots show distribution of expression levels for Ras-related protein Rab-1B, putative (SMED30017581) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Ras-related protein Rab-1B, putative (SMED30017581) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Ras-related protein Rab-1B, putative (SMED30017581) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30017581

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 5

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
head region	SMED30017581	SMESG000030620.1	SmedASXL_008780	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
head region	SMED30017581	SMESG000030620.1	dd_Smed_v6_14510_0_1	dd_Smed_v6	PMID:28171748 Stückemann et al., 2017
reproductive organ	SMED30017581	SMESG000030620.1	Contig52882	newmark_ests	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30017581	SMESG000030620.1	Contig52882	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017
epidermis	SMED30017581	SMESG000030620.1	dd_Smed_v4_14510_0_1	dd_Smed_v4	PMID:28292427 Wurtzel et al., 2017

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Human
Match: RAB1A (RAB1A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9758])

HSP 1 Score: 189.504 bits (480), Expect = 2.578e-60
Identity = 91/174 (52.30%), Postives = 129/174 (74.14%), Query Frame = 1

Query:   58 SMDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            SM+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNK D   K+ + Y   K+FA +  I F ETSAK+A NV+++F T+A EI +++
Sbjct:    3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 176

[Close]

Query:   58 SMDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            SM+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNK D   K+ + Y   K+FA +  I F ETSAK+A NV+++F T+A EI +++
Sbjct:    3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 176

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Human
Match: RAB1B (RAB1B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18370])

HSP 1 Score: 186.808 bits (473), Expect = 3.135e-59
Identity = 90/173 (52.02%), Postives = 128/173 (73.99%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ S+  + +W+  I++ + +N   +LVGNKSD   K+ +     K+FA +  I F ETSAK+A NV++AF T+A EI +++
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRM 173

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Human
Match: AL358472.6 (novel protein)

HSP 1 Score: 181.03 bits (458), Expect = 5.197e-57
Identity = 87/172 (50.58%), Postives = 125/172 (72.67%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRK 573
            M + YD+L KL+LIGDS VGK+ L++RF +D F+++YISTIG+DFK    +I  +K+KLQ+WDT+GQ+RF TITT+YYRG+ G +LVYD+TD  SF  +  WM  I +++    + +L+GNK D + KR++  E+  + A  + I F ETSAKS+ NVDEAF +LA +I+ K
Sbjct:    1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 172

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Human
Match: RAB13 (RAB13, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9762])

HSP 1 Score: 181.03 bits (458), Expect = 5.197e-57
Identity = 87/172 (50.58%), Postives = 125/172 (72.67%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRK 573
            M + YD+L KL+LIGDS VGK+ L++RF +D F+++YISTIG+DFK    +I  +K+KLQ+WDT+GQ+RF TITT+YYRG+ G +LVYD+TD  SF  +  WM  I +++    + +L+GNK D + KR++  E+  + A  + I F ETSAKS+ NVDEAF +LA +I+ K
Sbjct:    1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 172

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Celegans
Match: rab-1 (RAB family [Source:UniProtKB/TrEMBL;Acc:Q9UAQ6])

HSP 1 Score: 184.882 bits (468), Expect = 6.934e-59
Identity = 87/172 (50.58%), Postives = 126/172 (73.26%), Query Frame = 1

Query:   52 IISMDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEI 564
            + +M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYD+TD+ +F  + +W+  I++ + +N   +LVGNK D   KR +  +  + +A    I F ETSAKS+ NV++AF T+A+EI
Sbjct:    1 MAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEI 172

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Celegans
Match: rab-8 (RAB family; Rab8 [Source:UniProtKB/TrEMBL;Acc:G5EFC1])

HSP 1 Score: 175.637 bits (444), Expect = 4.107e-55
Identity = 85/173 (49.13%), Postives = 125/173 (72.25%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKS-ANVDEAFKTLATEIIRKV 576
            M + YDYL KL+LIGDS VGK+ +L RF DD F++S+ISTIG+DFK    E++ +K+KLQ+WDT+GQ+RF TITT+YYRG+ G +LVYD+T+  SF  +  W+  I + +  + + +++GNK D +++RE++ + G+Q A      F ETSAK+  N+DEAF TLA +I  K+
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKM 173

[Close]

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKS-ANVDEAFKTLATEIIRKV 576
            M + YDYL KL+LIGDS VGK+ +L RF DD F++S+ISTIG+DFK    E++ +K+KLQ+WDT+GQ+RF TITT+YYRG+ G +LVYD+T+  SF  +  W+  I + +  + + +++GNK D +++RE++ + G+Q A      F ETSAK+  N+DEAF TLA +I  K+
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKM 173

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Celegans
Match: rab-10 (Ras-related protein Rab-10 [Source:UniProtKB/Swiss-Prot;Acc:Q94148])

HSP 1 Score: 169.859 bits (429), Expect = 4.479e-53
Identity = 82/171 (47.95%), Postives = 122/171 (71.35%), Query Frame = 1

Query:   67 QNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAK-SANVDEAFKTLATEIIRKV 576
            + YD L KL+LIGDS VGK+ +L RF DD F+ ++ISTIG+DFK    E+  +K+KLQ+WDT+GQ+RF TITTSYYRG+ G +LVYD+T+  SF  +++W+  I++ + ++   +++GNK D  D+R ++ E G++ A  + I F ETSAK + +VD AF  LA  I+ K+
Sbjct:    4 RPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILAKM 174

[Close]

Query:   67 QNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAK-SANVDEAFKTLATEIIRKV 576
            + YD L KL+LIGDS VGK+ +L RF DD F+ ++ISTIG+DFK    E+  +K+KLQ+WDT+GQ+RF TITTSYYRG+ G +LVYD+T+  SF  +++W+  I++ + ++   +++GNK D  D+R ++ E G++ A  + I F ETSAK + +VD AF  LA  I+ K+
Sbjct:    4 RPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILAKM 174

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Fly
Match: Rab1 (gene:FBgn0285937 transcript:FBtr0084104)

HSP 1 Score: 186.808 bits (473), Expect = 1.612e-59
Identity = 91/174 (52.30%), Postives = 126/174 (72.41%), Query Frame = 1

Query:   58 SMDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            S++  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYD TD+ SF  + +W+  I + + +N   +LVGNKSD   K+ + +    ++AA   I F ETSAKSA NV++AF T+A EI  +V
Sbjct:    3 SVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRV 176

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Fly
Match: Rab8 (gene:FBgn0262518 transcript:FBtr0308833)

HSP 1 Score: 178.333 bits (451), Expect = 3.747e-56
Identity = 86/169 (50.89%), Postives = 123/169 (72.78%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAK-SANVDEAFKTLATEI 564
            M + YDYL KL+LIGDS VGK+ +L RF +D F+ ++ISTIG+DFK    E++ +K+KLQ+WDT+GQ+RF TITT+YYRG+ G +LVYD+T   SF  +  W+  I +++  + + +L+GNK +  DKR+++ E G+Q A    I F ETSAK S NV+EAF TLA++I
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDI 169

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Fly
Match: Rab8 (gene:FBgn0262518 transcript:FBtr0074921)

HSP 1 Score: 178.333 bits (451), Expect = 3.747e-56
Identity = 86/169 (50.89%), Postives = 123/169 (72.78%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAK-SANVDEAFKTLATEI 564
            M + YDYL KL+LIGDS VGK+ +L RF +D F+ ++ISTIG+DFK    E++ +K+KLQ+WDT+GQ+RF TITT+YYRG+ G +LVYD+T   SF  +  W+  I +++  + + +L+GNK +  DKR+++ E G+Q A    I F ETSAK S NV+EAF TLA++I
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDI 169

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Fly
Match: Rab3 (gene:FBgn0005586 transcript:FBtr0473383)

HSP 1 Score: 174.866 bits (442), Expect = 1.328e-54
Identity = 83/174 (47.70%), Postives = 126/174 (72.41%), Query Frame = 1

Query:   58 SMDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAK-SANVDEAFKTLATEIIRKV 576
            + DQN+DY+ KL++IG+S VGK+S L R+ DD F+ +++ST+G+DFK      ++++VKLQ+WDT+GQ+R+ TITT+YYRG+ GF+L+YDVT+ +SF  + +W+T+I   S  N ++ILVGNK D +D+R I++E G+Q A    + F ETSAK + NV   F+ L   I  K+
Sbjct:   13 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKM 186

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Fly
Match: Rab3 (gene:FBgn0005586 transcript:FBtr0088257)

HSP 1 Score: 174.866 bits (442), Expect = 1.328e-54
Identity = 83/174 (47.70%), Postives = 126/174 (72.41%), Query Frame = 1

Query:   58 SMDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAK-SANVDEAFKTLATEIIRKV 576
            + DQN+DY+ KL++IG+S VGK+S L R+ DD F+ +++ST+G+DFK      ++++VKLQ+WDT+GQ+R+ TITT+YYRG+ GF+L+YDVT+ +SF  + +W+T+I   S  N ++ILVGNK D +D+R I++E G+Q A    + F ETSAK + NV   F+ L   I  K+
Sbjct:   13 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKM 186

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Zebrafish
Match: rab1aa (RAB1A, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-090312-110])

HSP 1 Score: 190.274 bits (482), Expect = 8.212e-61
Identity = 91/173 (52.60%), Postives = 128/173 (73.99%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNK D   K+ + Y   K+FA +  I F ETSAKS+ NV++AF T+A EI +++
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTAAKEFADSLSIPFLETSAKSSTNVEQAFMTMAAEIKKRM 173

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Zebrafish
Match: rab1ab (RAB1A, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-030616-564])

HSP 1 Score: 189.504 bits (480), Expect = 1.495e-60
Identity = 91/173 (52.60%), Postives = 128/173 (73.99%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNK D   K+ + Y   K+FA +  I F ETSAK+A NV++AF T+A EI +++
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRM 173

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Zebrafish
Match: rab1ba (zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873])

HSP 1 Score: 188.734 bits (478), Expect = 3.982e-60
Identity = 90/173 (52.02%), Postives = 128/173 (73.99%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ S+  + +W+  I++ + +N   +LVGNK D   K+ + Y   K+FA +  I F ETSAK+A NV++AF T+A EI +++
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRM 173

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BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Zebrafish
Match: rab1bb (RAB1B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-040625-133])

HSP 1 Score: 184.496 bits (467), Expect = 1.543e-58
Identity = 88/173 (50.87%), Postives = 128/173 (73.99%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            M+  YDYL KL+LIGDS VGKS +L+RF DD +++S+ISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ S+  + +W+  I++ + +N   +LVGNK D   K+ + Y   K+FA +  I F ETSAK+A NV++AF T+A EI +++
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLKEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAEEIKKRM 173

[Close]

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            M+  YDYL KL+LIGDS VGKS +L+RF DD +++S+ISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ S+  + +W+  I++ + +N   +LVGNK D   K+ + Y   K+FA +  I F ETSAK+A NV++AF T+A EI +++
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLKEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAEEIKKRM 173

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BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Xenopus
Match: rab1a (RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:448007])

HSP 1 Score: 191.045 bits (484), Expect = 5.746e-61
Identity = 94/186 (50.54%), Postives = 134/186 (72.04%), Query Frame = 1

Query:   58 SMDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKVYLINVSEQQKKS 612
            SM+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNK D   K+ + Y   K+FA +  I F ETSAK+A NV++AF T+A EI +++     +  Q+K+
Sbjct:    3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGGQEKN 188

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Xenopus
Match: rab1a (RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:448007])

HSP 1 Score: 185.652 bits (470), Expect = 9.985e-59
Identity = 94/186 (50.54%), Postives = 133/186 (71.51%), Query Frame = 1

Query:   58 SMDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKVYLINVSEQQKKS 612
            SM  N DYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNK D   K+ + Y   K+FA +  I F ETSAK+A NV++AF T+A EI +++     +  Q+K+
Sbjct:    5 SMPTN-DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGGQEKN 189

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BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Xenopus
Match: maf (v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog [Source:Xenbase;Acc:XB-GENE-6053271])

HSP 1 Score: 182.956 bits (463), Expect = 1.042e-57
Identity = 90/171 (52.63%), Postives = 124/171 (72.51%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAK-SANVDEAFKTLATEIIR 570
            M ++YD+L KL++IGDS VGKSSLL+RF D+ FS SYI+TIGVDFK    EIN EKVKLQ+WDT+GQ+RF TIT++YYRG+ G ++VYDVT   SF  +  W+  IN++ D  C+ ILVGNK+D  +++ +  E+  +FAA  +I   ETSAK + NV+E F  +   ++R
Sbjct:    1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCR-ILVGNKNDDPERKVVETEDAYKFAAQMDIQLFETSAKENLNVEEMFNCITELVLR 170

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BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Xenopus
Match: pknox2 (PBX/knotted 1 homeobox 2 [Source:Xenbase;Acc:XB-GENE-853128])

HSP 1 Score: 180.259 bits (456), Expect = 1.315e-56
Identity = 87/173 (50.29%), Postives = 127/173 (73.41%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            M + YDYL KL+LIGDS VGK+ LL RF +D F+ ++ISTIG+DFK    E++ +K+KLQ+WDT+GQ+RF TITT+YYRG+ G +LVYD+T+  SF  +  W+  I + +  + + +++GNK D  DKR+++ E+G++ A    I F ETSAKS+ NV+EAF TLA +I+ K+
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKL 173

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Xenopus
Match: clcn7 (chloride channel, voltage-sensitive 7 [Source:Xenbase;Acc:XB-GENE-995168])

HSP 1 Score: 171.4 bits (433), Expect = 5.479e-53
Identity = 82/176 (46.59%), Postives = 126/176 (71.59%), Query Frame = 1

Query:   52 IISMDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKS-ANVDEAFKTLATEIIRKV 576
            + +M + YDYL KL+LIGDS VGK+ +L RF +D F+ ++ISTIG+DFK    E++ +++KLQ+WDT+GQ+RF TITT+YYRG+ G +LVYD+T+  SF  +  W+  I + +  + + +++GNK D  +KR+++ E+G++ A    I F ETSAK+  NV+ AF TLA +I  K+
Sbjct:   11 VFNMAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVEKMILGNKCDVNEKRQVSKEKGEKLALEYGIKFMETSAKANINVENAFFTLARDIKAKM 186

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Mouse
Match: Rab1a (RAB1A, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:97842])

HSP 1 Score: 189.504 bits (480), Expect = 1.770e-60
Identity = 91/174 (52.30%), Postives = 129/174 (74.14%), Query Frame = 1

Query:   58 SMDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            SM+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNK D   K+ + Y   K+FA +  I F ETSAK+A NV+++F T+A EI +++
Sbjct:    3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 176

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Mouse
Match: Rab1a (RAB1A, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:97842])

HSP 1 Score: 187.963 bits (476), Expect = 7.559e-60
Identity = 90/173 (52.02%), Postives = 128/173 (73.99%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNK D   K+ + Y   K+FA +  I F ETSAK+A NV+++F T+A EI +++
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 173

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Mouse
Match: Rab1b (RAB1B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1923558])

HSP 1 Score: 186.422 bits (472), Expect = 3.474e-59
Identity = 89/173 (51.45%), Postives = 128/173 (73.99%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ S+  + +W+  I++ + +N   +LVGNKSD   K+ +     K+FA +  + F ETSAK+A NV++AF T+A EI +++
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRM 173

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Mouse
Match: Rab13 (RAB13, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1927232])

HSP 1 Score: 182.57 bits (462), Expect = 1.012e-57
Identity = 86/172 (50.00%), Postives = 125/172 (72.67%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRK 573
            M + YD+L KL+LIGDS VGK+ L++RF +D F+ +YISTIG+DFK    +I  +++KLQ+WDT+GQ+RF TITT+YYRG+ G +LVYD+TD  SF  +  WM  I +++    + +L+GNK D + KR++  E+ ++ A  + I F ETSAKS+ NVDEAF +LA +I+ K
Sbjct:    1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLK 172

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Mouse
Match: Rab35 (RAB35, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1924657])

HSP 1 Score: 180.644 bits (457), Expect = 4.907e-57
Identity = 89/171 (52.05%), Postives = 122/171 (71.35%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAK-SANVDEAFKTLATEIIR 570
            M ++YD+L KL++IGDS VGKSSLL+RF D+ FS SYI+TIGVDFK    EIN EKVKLQ+WDT+GQ+RF TIT++YYRG+ G ++VYDVT   SF  +  W+  IN++ D  C+ ILVGNK+D  +++ +  E+  +FA    I   ETSAK + NV+E F  +   ++R
Sbjct:    1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCR-ILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLR 170

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. UniProt/SwissProt
Match: sp|Q05974|RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis OX=6523 GN=RAB1A PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.817e-60
Identity = 93/186 (50.00%), Postives = 133/186 (71.51%), Query Frame = 1

Query:   58 SMDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKVYLINVSEQQKKS 612
            +M+ +YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNKSD   K+ + +   K++A    I F ETSAK+A NV++AF T+A EI  ++  I  +   K S
Sbjct:    3 TMNPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAASDSKPS 188

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. UniProt/SwissProt
Match: sp|P31584|YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri OX=3067 GN=YPTV1 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.134e-60
Identity = 92/169 (54.44%), Postives = 125/169 (73.96%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEI 564
            M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNKSD   K+ + Y+  K FA    I F ETSAK+A NV++AF T+A EI
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. UniProt/SwissProt
Match: sp|Q39571|YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii OX=3055 GN=YPTC1 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 9.152e-60
Identity = 92/169 (54.44%), Postives = 124/169 (73.37%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEI 564
            M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNKSD   K+ + Y   K FA    I F ETSAK+A NV++AF T+A EI
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. UniProt/SwissProt
Match: sp|Q52NJ2|RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa OX=9823 GN=RAB1A PE=2 SV=3)

HSP 1 Score: 189.889 bits (481), Expect = 9.745e-60
Identity = 91/174 (52.30%), Postives = 129/174 (74.14%), Query Frame = 1

Query:   58 SMDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            SM+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNK D   K+ + Y   K+FA +  I F ETSAK+A NV+++F T+A EI +++
Sbjct:    3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 176

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. UniProt/SwissProt
Match: sp|P22125|RAB1_DIPOM (Ras-related protein ORAB-1 OS=Diplobatis ommata OX=1870830 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.011e-59
Identity = 94/187 (50.27%), Postives = 133/187 (71.12%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKVYLINVSEQQKKSKL 618
            M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNK D   K+ + Y   K+FA +  I F ETSAK+A NV++AF T+A EI +++     S   +KS +
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSEKSNV 187

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. TrEMBL
Match: A0A1A8N8D2 (Uncharacterized protein (Fragment) OS=Nothobranchius pienaari OX=704102 GN=Nfu_g_1_017174 PE=4 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 4.099e-62
Identity = 95/174 (54.60%), Postives = 130/174 (74.71%), Query Frame = 1

Query:   58 SMDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
             M ++YDYL KL++IGDS VGKSSLL+RF D+ FS SYI+TIGVDFK    E+N EKVKLQ+WDT+GQ+RF  +T SYYRG++G L+VYD+T R+++  LS W+T     ++ N  IIL+GNK+D + +R++TYEE KQFA  N ++F E SAK+  NV+EAF   A +I + +
Sbjct:    3 GMARDYDYLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVELNGEKVKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEEAFLEAAKKIYQNI 176

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. TrEMBL
Match: A0A1J1H3I3 (Ras-related protein Rab-1B, putative OS=Plasmodium gallinaceum OX=5849 GN=RAB1b PE=4 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 6.014e-62
Identity = 102/186 (54.84%), Postives = 138/186 (74.19%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKVYLINVSEQQKKSK 615
            M+ +YD L K++LIGDS VGKS LL+RF DD ++DSYISTIGVDFK    EI+++ +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTDR+SF  +  W+  I K + ++ + IL+GNK D K+ R ++YEEGK+ A +  I F ETSAK A NV++AFKT+A EI  K +L    E Q+K K
Sbjct:    1 MNDSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIDDKIIKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEIEKYASEDVQKILIGNKIDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAYEIKNKSHL----ENQQKGK 182

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. TrEMBL
Match: A0A139XVT8 (Putative small GTP binding protein rab1a OS=Toxoplasma gondii ARI OX=1074872 GN=TGARI_214770 PE=4 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.168e-61
Identity = 100/185 (54.05%), Postives = 134/185 (72.43%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKVYLINVSEQQKKS 612
            M   YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    +++ + VKLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTDR SF  +  WM  I+K + +    +LVGNK D   KR +TYEEGK+FA +  + F ETSAK+A NV++AF  +A+EI  +V    V++QQ + 
Sbjct:    1 MKPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKNWMMEIDKYAMEGVSKLLVGNKCDLTSKRTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKARV---QVNQQQSRP 182

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. TrEMBL
Match: A0A125YLS2 (Small GTP binding protein rab1a, putative OS=Toxoplasma gondii (strain ATCC 50611 / Me49) OX=508771 GN=TGME49_214770 PE=4 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.168e-61
Identity = 100/185 (54.05%), Postives = 134/185 (72.43%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKVYLINVSEQQKKS 612
            M   YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    +++ + VKLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTDR SF  +  WM  I+K + +    +LVGNK D   KR +TYEEGK+FA +  + F ETSAK+A NV++AF  +A+EI  +V    V++QQ + 
Sbjct:    1 MKPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKNWMMEIDKYAMEGVSKLLVGNKCDLTSKRTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKARV---QVNQQQSRP 182

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. TrEMBL
Match: A0A086JV56 (Putative small GTP binding protein rab1a OS=Toxoplasma gondii GAB2-2007-GAL-DOM2 OX=1130820 GN=TGDOM2_214770 PE=4 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.168e-61
Identity = 100/185 (54.05%), Postives = 134/185 (72.43%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKVYLINVSEQQKKS 612
            M   YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    +++ + VKLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTDR SF  +  WM  I+K + +    +LVGNK D   KR +TYEEGK+FA +  + F ETSAK+A NV++AF  +A+EI  +V    V++QQ + 
Sbjct:    1 MKPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKNWMMEIDKYAMEGVSKLLVGNKCDLTSKRTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKARV---QVNQQQSRP 182

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Cavefish
Match: zgc:171927 (ras-related protein ORAB-1-like [Source:NCBI gene;Acc:103045400])

HSP 1 Score: 190.274 bits (482), Expect = 8.553e-61
Identity = 95/184 (51.63%), Postives = 134/184 (72.83%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKVYLINVSEQQKK 609
            M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + VKLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  L +W+  I++ + +N   +LVGNKSD   K+ + +   K+FA   +I F E+SAK+A NV++AF T+A+EI +++   NV  +  K
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEMDGKIVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNLKQWLEEIDRYACENVSKLLVGNKSDLTSKKVVDFTTAKEFAEPLKIPFLESSAKNASNVEKAFLTMASEIQKRLGSENVQNETVK 184

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Cavefish
Match: rab1ab (ras-related protein Rab-1A [Source:NCBI gene;Acc:103035225])

HSP 1 Score: 189.504 bits (480), Expect = 1.293e-60
Identity = 91/173 (52.60%), Postives = 128/173 (73.99%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNK D   K+ + Y   K+FA +  I F ETSAK+A NV++AF T+A EI +++
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRM 173

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Cavefish
Match: rab13 (RAB13, member RAS oncogene family [Source:NCBI gene;Acc:103044636])

HSP 1 Score: 184.496 bits (467), Expect = 1.440e-58
Identity = 94/202 (46.53%), Postives = 135/202 (66.83%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEII-----------RKVYLINVSEQQKKSKLCRLF 630
            M + YD+L KL+LIGDS VGK+ L++RF +D F+ +YISTIG+DFK    E+  +KVKLQ+WDT+GQ+RF TITT+YYRG+ G +LVYD+TD  SF  +  WM  I +++      +L+GNK D + KR+++ E G++ A  + I F ETSAKS+ NV+E+F +LA +I+           R+V L   +  +KKS  C L 
Sbjct:    1 MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLLGNKCDIEAKRKVSKEMGEKLAKDHGIRFFETSAKSSINVEESFMSLARDILLKSGKKSGPTGREVKLTTTTTPEKKSSKCLLL 202

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Cavefish
Match: ENSAMXT00000045110.1 (ras-related protein Rab-1A [Source:NCBI gene;Acc:103028654])

HSP 1 Score: 184.496 bits (467), Expect = 1.456e-58
Identity = 88/173 (50.87%), Postives = 127/173 (73.41%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + ++   ++VGNK D   K+ + Y   K+FA +  I F E SAK+A NV++AF T+A EI +++
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASESVNKLMVGNKCDLTTKKVVDYTTAKEFADSLGIPFLEASAKNATNVEQAFMTMAAEIKKRM 173

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Cavefish
Match: rab1ba (zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873])

HSP 1 Score: 184.882 bits (468), Expect = 1.928e-58
Identity = 88/171 (51.46%), Postives = 127/171 (74.27%), Query Frame = 1

Query:   67 QNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            + +DYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ S+  + +W+  I++ + +N   +LVGNK D   K+ + Y   K+FA +  I F ETSAK+A NV++AF T+A EI +++
Sbjct:   24 RKHDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRM 194

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Sea Lamprey
Match: rab1aa (RAB1A, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-090312-110])

HSP 1 Score: 192.586 bits (488), Expect = 2.067e-62
Identity = 92/174 (52.87%), Postives = 130/174 (74.71%), Query Frame = 1

Query:   58 SMDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            +M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNK D   K+ + Y   K+FA + EI F ETSAK+A NV++AF T+A EI +++
Sbjct:    3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLEIPFLETSAKNATNVEQAFMTMAAEIKKRM 176

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Sea Lamprey
Match: rab8a (RAB8A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-070424-36])

HSP 1 Score: 174.096 bits (440), Expect = 3.441e-55
Identity = 84/173 (48.55%), Postives = 124/173 (71.68%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAK-SANVDEAFKTLATEIIRKV 576
            M + YDYL KL+LIGDS VGK+ +L RF +D F+ ++ISTIG+DFK    +++ +K+KLQ+WDT+GQ+RF TITT+YYRG+ G +LVYD+T+  SF  +  W+  I + +  + + +++GNK D  ++R++T E G++ A    I F ETSAK S NV+EAF TLA +I  K+
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIDLDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVEKMILGNKCDMNERRQVTRERGEKLAIEYGIKFMETSAKASINVEEAFFTLARDIKAKM 173

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Sea Lamprey
Match: rab3c (RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263])

HSP 1 Score: 174.096 bits (440), Expect = 8.168e-55
Identity = 81/174 (46.55%), Postives = 124/174 (71.26%), Query Frame = 1

Query:   58 SMDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAK-SANVDEAFKTLATEIIRKV 576
            + DQN+DY+ KL++IG+S VGK+S L R+ D+ F+ +++ST+G+DFK      NE+++KLQ+WDT+GQ+R+ TITT+YYRG+ GF+L+YD+T+ +SF  +S+W T+I   S  N +++LVGNK D +D R +  E+G+Q A      F ETSAK + NV + F+ L   I  K+
Sbjct:   21 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADESFTSAFVSTVGIDFKVKTVYRNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEDSFNAVSDWSTQIKTYSWDNAQVVLVGNKCDMEDDRMVPTEQGRQLAEQLGFEFFETSAKDNINVKQTFERLVDVICEKM 194

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002219.1 (pep scaffold:Pmarinus_7.0:GL483980:50:9020:-1 gene:ENSPMAG00000002006.1 transcript:ENSPMAT00000002219.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 170.629 bits (431), Expect = 1.091e-53
Identity = 80/170 (47.06%), Postives = 117/170 (68.82%), Query Frame = 1

Query:   70 NYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            NY Y+ K ++IGD  VGKS LL +F +  F      TIGV+F T + E++ +KVKLQ+WDT+GQ+RF  +T SYYRG++G L+VYD+T R+++  LS W+T     ++ N  I L+GNK+D + +R++TYEE KQFA  N ++F E SAK+  NV+EAF   A +I + +
Sbjct:    7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKVKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGDNVEEAFLETAKKIYQNI 176

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Sea Lamprey
Match: RAB2B (RAB2B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:20246])

HSP 1 Score: 167.933 bits (424), Expect = 1.367e-52
Identity = 82/170 (48.24%), Postives = 118/170 (69.41%), Query Frame = 1

Query:   70 NYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAK-SANVDEAFKTLATEIIRKV 576
            +Y YL K ++IGD+ VGKS LL++F D  F   +  TIGV+F   +  I  ++VKLQ+WDT+GQ+ F +IT SYYRG++G LLVYD+T R++F  L+ W+    + S+ N  I+L+GNKSD + +RE+  EEG+ FA  + ++F ETSAK +ANV+EAF   A EI  K+
Sbjct:    7 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIAIGGKQVKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTAWLEDARQHSNSNMVIMLIGNKSDLESRREVKCEEGEAFAREHGLVFMETSAKTAANVEEAFINTAREIYEKI 176

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Yeast
Match: YPT1 (Rab family GTPase; involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by type II protein geranylgeranyltransferase (Bet2p-Bet4p); binds to unspliced HAC1 mRNA; regulates the unfolded protein response (UPR) by promoting the decay of HAC1 RNA; localizes to the early Golgi, the transitional Golgi and ER membranes, pre-autophagosomal structures, and cytoplasmic vesicles [Source:SGD;Acc:S000001856])

HSP 1 Score: 185.267 bits (469), Expect = 8.667e-60
Identity = 94/184 (51.09%), Postives = 130/184 (70.65%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSA-KSANVDEAFKTLATEIIRKVYLINVSEQQKK 609
            M+  YDYL KL+LIG+S VGKS LL+RF DD +++ YISTIGVDFK    E++ + VKLQ+WDT+GQ+RF TIT+SYYRGS G ++VYDVTD+ SF  +  W+  I++ +      +LVGNK D KDKR + Y+  K+FA  N++ F ETSA  S NV++AF T+A +I   +   N++E  +K
Sbjct:    1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETTQK 184

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Yeast
Match: SEC4 (Rab family GTPase; essential for vesicle-mediated exocytic secretion and autophagy; associates with the exocyst component Sec15p and may regulate polarized delivery of transport vesicles to the exocyst at the plasma membrane [Source:SGD;Acc:S000001889])

HSP 1 Score: 175.637 bits (444), Expect = 8.048e-56
Identity = 88/171 (51.46%), Postives = 126/171 (73.68%), Query Frame = 1

Query:   67 QNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKS-ANVDEAFKTLATEIIRKV 576
            ++YD ++K++LIGDS VGKS LLVRFV+D F+ S+I+TIG+DFK    +IN +KVKLQ+WDT+GQ+RF TITT+YYRG+ G +LVYDVTD  +FT + +W   +N+ ++   +++LVGNKSD  + R +T ++G+  A    I F E+SAK+  NV+E F TLA  I  K+
Sbjct:   15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Yeast
Match: YPT32 (Rab family GTPase involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; protein abundance increases in response to DNA replication stress; YPT32 has a paralog, YPT31, that arose from the whole genome duplication [Source:SGD;Acc:S000003178])

HSP 1 Score: 164.466 bits (415), Expect = 2.053e-51
Identity = 80/170 (47.06%), Postives = 116/170 (68.24%), Query Frame = 1

Query:   70 NYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSA-KSANVDEAFKTLATEIIRKV 576
            +YDYL K+VLIGDS VGKS+LL RF  D F+    STIGV+F T   E+  +K+K Q+WDT+GQ+R+  IT++YYRG+ G L+VYD++  +S+   + W+T + +++D N  + L+GNKSD    R +  +E K FA  N+++F ETSA  S NVD+AF+ L   I + V
Sbjct:    9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMV 178

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Yeast
Match: YPT31 (Rab family GTPase; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; YPT31 has a paralog, YPT32, that arose from the whole genome duplication; localizes to the transitional and late Golgi [Source:SGD;Acc:S000000833])

HSP 1 Score: 161.384 bits (407), Expect = 4.295e-50
Identity = 79/169 (46.75%), Postives = 116/169 (68.64%), Query Frame = 1

Query:   73 YDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSA-KSANVDEAFKTLATEIIRKV 576
            YD L K+VLIGDS VGKS+LL RF  + F+    STIGV+F T   EI+ +++K Q+WDT+GQ+R+  IT++YYRG+ G L+VYD++  +S+   + W++ + +++D N  + L+GNKSD    R +  EE K FA  N+++F ETSA  S NVD+AF+ L   I +KV
Sbjct:   10 YDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKV 178

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Yeast
Match: VPS21 (Endosomal Rab family GTPase; required for endocytic transport and sorting of vacuolar hydrolases; required for endosomal localization of the CORVET complex; required with YPT52 for MVB biogenesis and sorting; involved in autophagy and ionic stress tolerance; geranylgeranylation required for membrane association; protein abundance increases in response to DNA replication stress; mammalian Rab5 homolog; VPS21 has a paralog, YPT53, that arose from the whole genome duplication [Source:SGD;Acc:S000005615])

HSP 1 Score: 130.954 bits (328), Expect = 2.033e-38
Identity = 67/167 (40.12%), Postives = 106/167 (63.47%), Query Frame = 1

Query:   85 LKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSD---QKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRK 573
            +KLVL+G++ VGKSS+++RFV + F+++   TIG  F T    INE  VK ++WDT+GQ+RF ++   YYR +   L+VYDVT   SF +   W+  +++ + K+  I LVGNK D   +  +R++  EEG++ A    ++F ETSAK+  NV++ F  +  +I  K
Sbjct:    8 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIPLK 174

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Nematostella
Match: EDO40167 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S806])

HSP 1 Score: 185.652 bits (470), Expect = 1.725e-59
Identity = 88/170 (51.76%), Postives = 126/170 (74.12%), Query Frame = 1

Query:   58 SMDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEI 564
            +M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNK D   K+ + +   K++A +  + F ETSAK+A NV++AF T+A EI
Sbjct:    3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKCDLTTKKVVDFTTAKEYAESLGVPFLETSAKNATNVEQAFMTMAAEI 172

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Nematostella
Match: EDO42144 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S2G3])

HSP 1 Score: 182.57 bits (462), Expect = 3.724e-58
Identity = 88/173 (50.87%), Postives = 123/173 (71.10%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAK-SANVDEAFKTLATEIIRKV 576
            M+  YDYL KL+LIGDS VGKSSLL+RF DD FS++YISTIGVDFK     ++ + +KLQ+WDT+GQ+RF T+TT+YYR + G +L+YDV +  +F  LS+W+  +++ + +    ILVGNK D  D R++ Y   K+FA   +I F ETSAK S NV+  F+T+A E+  K+
Sbjct:    1 MNSEYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNKCDLIDCRQVGYNTAKEFAEKLDISFIETSAKDSTNVESVFRTMAAELKAKL 173

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Nematostella
Match: EDO47471 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RMA6])

HSP 1 Score: 178.718 bits (452), Expect = 7.857e-57
Identity = 83/170 (48.82%), Postives = 127/170 (74.71%), Query Frame = 1

Query:   67 QNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKS-ANVDEAFKTLATEIIRK 573
            ++YDYL KL+LIGDS VGK+ +L RF DD F+ ++ISTIG+DFK    E+  +K+KLQ+WDT+GQ+RF TITTSYYRG+ G +LVYD+T   +F  +S+W+  I + ++++ + +++GNK D  D+R ++ E G+Q A  + I F ETSAK+  N+++AF+ LA +I++K
Sbjct:    4 KSYDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIEMQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERGEQIAREHGIRFLETSAKTNINIEQAFQYLAQDILKK 173

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Nematostella
Match: EDO41018 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S5I6])

HSP 1 Score: 176.792 bits (447), Expect = 6.837e-56
Identity = 84/169 (49.70%), Postives = 124/169 (73.37%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAK-SANVDEAFKTLATEI 564
            M + YD+L KL+LIGDS VGK+ +L RF +D F+ ++ISTIG+DFK    E++ +K+KLQ+WDT+GQ+RF TITT+YYRG+ G +LVYD+T+  SF  +  W+  I + + ++ + +++GNK D +D+R+++ E G+Q A    I F ETSAK S NV+EAF TLA +I
Sbjct:    1 MAKTYDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKNWIRNIEEHASQDVEKMVLGNKCDMEDRRQVSKERGEQLAVEYGIKFMETSAKASINVEEAFFTLARDI 169

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Nematostella
Match: EDO40845 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S5Z2])

HSP 1 Score: 174.481 bits (441), Expect = 2.398e-55
Identity = 86/178 (48.31%), Postives = 126/178 (70.79%), Query Frame = 1

Query:   76 DYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKS-ANVDEAFKTLATEIIRKVYLINVSEQQK 606
            D   KL+LIGDS VGK+ ++ RF D+ F+ S+ISTIG+DFK    E+  +K+KLQ+WDT+GQ+RF TITT+YYRG+ G +LVYDVT+  SF+ +S+W+ +I+  ++++ K +LVGNK D  DKR I+  +G+Q A++  I F ETSA S  NV+++F  L  +I+  V    V E +K
Sbjct:    7 DLFFKLLLIGDSGVGKTCIIFRFADNTFNPSFISTIGIDFKIKTLELGGKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANEDVKRMLVGNKCDMYDKRVISQTKGEQLASSYGISFIETSALSNINVEKSFVVLTEDILNAVCPPTVEETEK 184

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Medaka
Match: rab1aa (ras-related protein Rab-1A [Source:NCBI gene;Acc:101162421])

HSP 1 Score: 189.504 bits (480), Expect = 1.271e-60
Identity = 91/173 (52.60%), Postives = 127/173 (73.41%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNK D   ++ + Y   K+FA    I F ETSAKSA NV++AF T+A EI +++
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTRKVVDYTTAKEFADNLGIPFLETSAKSATNVEQAFMTMAAEIKKRM 173

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Medaka
Match: rab1ab (ras-related protein ORAB-1 [Source:NCBI gene;Acc:101161080])

HSP 1 Score: 189.504 bits (480), Expect = 1.448e-60
Identity = 91/173 (52.60%), Postives = 128/173 (73.99%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKV 576
            M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  + +W+  I++ + +N   +LVGNK D   K+ + Y   K+FA +  I F ETSAK+A NV++AF T+A EI +++
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRM 173

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Medaka
Match: ENSORLT00000032751.1 (RAB13, member RAS oncogene family [Source:NCBI gene;Acc:101156603])

HSP 1 Score: 181.03 bits (458), Expect = 3.188e-57
Identity = 86/172 (50.00%), Postives = 126/172 (73.26%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRK 573
            M + YD+L KL+LIGDS VGK+ L++RF +D ++ +YISTIG+DFK    E++ +KVKLQ+WDT+GQ+RF TITT+YYRG+ G +LVYD+TD  SF  +  WM  I +++      +L+GNK D + KR+++ E G+  A  + I F ETSAKS+ NV+E+F+ LA +I++K
Sbjct:    1 MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNYNTTYISTIGIDFKVKTIEVDGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIRENASAGVTRMLLGNKCDVEAKRKVSKETGETLAKEHAIRFFETSAKSSINVEESFQALARDILQK 172

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Medaka
Match: zgc:171927 (ras-related protein ORAB-1-like [Source:NCBI gene;Acc:101173484])

HSP 1 Score: 179.874 bits (455), Expect = 1.088e-56
Identity = 88/169 (52.07%), Postives = 126/169 (74.56%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEI 564
            M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    +++ + VKLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVT++ SF  + +W+  I++ + +N   +LVGNKSD   K+ +     +  A++ +I F ETSAKS+ NV++AF T+A+EI
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVRQWLEEIDRYACENVSRLLVGNKSDLVSKKVVDAATAQDLASSLKIPFLETSAKSSGNVEKAFLTMASEI 169

[Close]

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEI 564
            M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    +++ + VKLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVT++ SF  + +W+  I++ + +N   +LVGNKSD   K+ +     +  A++ +I F ETSAKS+ NV++AF T+A+EI
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVRQWLEEIDRYACENVSRLLVGNKSDLVSKKVVDAATAQDLASSLKIPFLETSAKSSGNVEKAFLTMASEI 169

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Planmine SMEST
Match: SMESG000030620.1 (SMESG000030620.1)

HSP 1 Score: 384.03 bits (985), Expect = 1.377e-137
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSANVDEAFKTLATEIIRKVYLINVSEQQKKSKLCRLF 630
            MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSANVDEAFKTLATEIIRKVYLINVSEQQKKSKLCRLF
Sbjct:    1 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSANVDEAFKTLATEIIRKVYLINVSEQQKKSKLCRLF 190

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Planmine SMEST
Match: SMESG000030620.1 (SMESG000030620.1)

HSP 1 Score: 308.145 bits (788), Expect = 3.734e-108
Identity = 160/190 (84.21%), Postives = 160/190 (84.21%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSANVDEAFKTLATEIIRKVYLINVSEQQKKSKLCRLF 630
            MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINK                              FAATNEIMFCETSAKSANVDEAFKTLATEIIRKVYLINVSEQQKKSKLCRLF
Sbjct:    1 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINK------------------------------FAATNEIMFCETSAKSANVDEAFKTLATEIIRKVYLINVSEQQKKSKLCRLF 160

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Planmine SMEST
Match: SMESG000030619.1 (SMESG000030619.1)

HSP 1 Score: 196.823 bits (499), Expect = 1.764e-63
Identity = 95/172 (55.23%), Postives = 132/172 (76.74%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRK 573
            M ++YDYL KL+LIGDS VGK+SLLVRF D+ FS S+I+TIG+DFK    ++  +KVKLQ+WDT+GQ+RF TITTSYYRG++G +LVYDVT  +SF  +++WM  I + ++ + + +L+GNKSD  D+REI+ E G + A  + I+F ETSAKS+ NVD+AF+ L  EI +K
Sbjct:    1 MAKDYDYLFKLLLIGDSGVGKTSLLVRFADETFSTSFITTIGIDFKIKTMDLEGKKVKLQVWDTAGQERFRTITTSYYRGATGIMLVYDVTSASSFNNINQWMQNIAEHANSDVEKMLIGNKSDLNDRREISRESGLKVAQEHGILFSETSAKSSDNVDQAFRMLTMEIKKK 172

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Planmine SMEST
Match: SMESG000026323.1 (SMESG000026323.1)

HSP 1 Score: 187.193 bits (474), Expect = 8.854e-60
Identity = 93/187 (49.73%), Postives = 132/187 (70.59%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAKSA-NVDEAFKTLATEIIRKVYLINVSEQQKKSKL 618
            M+  YDYL KL+LIGDS VGKS LL+RF DD +++SYISTIGVDFK    E++ + +KLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD++SF  +  W++ I++ +++N   +LVGNK+D   KR +     K++A +  I F ETSAK A NV++AF T+A EI  +      S Q+   K+
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKNWLSEIDRYANENVNKLLVGNKTDLISKRVVEASNAKEYADSLNIPFLETSAKDATNVEQAFLTMAGEIKSRSGPPASSSQKPTVKV 187

[Close]

BLAST of Ras-related protein Rab-1B, putative vs. Planmine SMEST
Match: SMESG000049854.1 (SMESG000049854.1)

HSP 1 Score: 185.652 bits (470), Expect = 3.159e-59
Identity = 91/185 (49.19%), Postives = 128/185 (69.19%), Query Frame = 1

Query:   61 MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVTEINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLSEWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCETSAK-SANVDEAFKTLATEIIRKVYLINVSEQQKKS 612
            M+  YDYL KL+LIGDS VGKS +L+RF DD ++DSYISTIGVDFK    E++ + VKLQ+WDT+GQ+RF TIT+SYYRG+ G ++VYDVTD+ SF  +  W+  I + +++N   +L+GNKSD   K+ +     K+FA +  I F ETSA+ S NV++ F T+A EI  ++     +  Q+ S
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCILLRFADDTYTDSYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQTSFNNVKNWLNEIERYANENVNKLLIGNKSDMVSKKVVDSGTAKEFADSLNIPFLETSARDSTNVEKTFITMAQEIKNRLGPAAAASNQRPS 185

The following BLAST results are available for this feature:

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Human
BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Celegans
BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Fly
BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Zebrafish
BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Xenopus
BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Mouse
BLAST of Ras-related protein Rab-1B, putative vs. UniProt/SwissProt
BLAST of Ras-related protein Rab-1B, putative vs. TrEMBL
BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Cavefish
BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Sea Lamprey
BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Yeast
BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Nematostella
BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Medaka
BLAST of Ras-related protein Rab-1B, putative vs. Planmine SMEST

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
RAB1A	2.578e-60	52.30	RAB1A, member RAS oncogene family [Source:HGNC Sym...	[more]
RAB1A	2.578e-60	52.30	RAB1A, member RAS oncogene family [Source:HGNC Sym...	[more]
RAB1B	3.135e-59	52.02	RAB1B, member RAS oncogene family [Source:HGNC Sym...	[more]
AL358472.6	5.197e-57	50.58	novel protein	[more]
RAB13	5.197e-57	50.58	RAB13, member RAS oncogene family [Source:HGNC Sym...	[more]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rab-1	6.934e-59	50.58	RAB family [Source:UniProtKB/TrEMBL;Acc:Q9UAQ6]	[more]
rab-8	4.107e-55	49.13	RAB family; Rab8 [Source:UniProtKB/TrEMBL;Acc:G5E...	[more]
rab-8	4.107e-55	49.13	RAB family; Rab8 [Source:UniProtKB/TrEMBL;Acc:G5E...	[more]
rab-10	4.479e-53	47.95	Ras-related protein Rab-10 [Source:UniProtKB/Swis...	[more]
rab-10	4.479e-53	47.95	Ras-related protein Rab-10 [Source:UniProtKB/Swis...	[more]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Rab1	1.612e-59	52.30	gene:FBgn0285937 transcript:FBtr0084104	[more]
Rab8	3.747e-56	50.89	gene:FBgn0262518 transcript:FBtr0308833	[more]
Rab8	3.747e-56	50.89	gene:FBgn0262518 transcript:FBtr0074921	[more]
Rab3	1.328e-54	47.70	gene:FBgn0005586 transcript:FBtr0473383	[more]
Rab3	1.328e-54	47.70	gene:FBgn0005586 transcript:FBtr0088257	[more]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rab1aa	8.212e-61	52.60	RAB1A, member RAS oncogene family a [Source:ZFIN;A...	[more]
rab1ab	1.495e-60	52.60	RAB1A, member RAS oncogene family b [Source:ZFIN;A...	[more]
rab1ba	3.982e-60	52.02	zRAB1B, member RAS oncogene family a [Source:ZFIN;...	[more]
rab1bb	1.543e-58	50.87	RAB1B, member RAS oncogene family b [Source:ZFIN;A...	[more]
rab1bb	1.543e-58	50.87	RAB1B, member RAS oncogene family b [Source:ZFIN;A...	[more]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rab1a	5.746e-61	50.54	RAB1A, member RAS oncogene family [Source:NCBI gen...	[more]
rab1a	9.985e-59	50.54	RAB1A, member RAS oncogene family [Source:NCBI gen...	[more]
maf	1.042e-57	52.63	v-maf avian musculoaponeurotic fibrosarcoma oncoge...	[more]
pknox2	1.315e-56	50.29	PBX/knotted 1 homeobox 2 [Source:Xenbase;Acc:XB-GE...	[more]
clcn7	5.479e-53	46.59	chloride channel, voltage-sensitive 7 [Source:Xenb...	[more]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Rab1a	1.770e-60	52.30	RAB1A, member RAS oncogene family [Source:MGI Symb...	[more]
Rab1a	7.559e-60	52.02	RAB1A, member RAS oncogene family [Source:MGI Symb...	[more]
Rab1b	3.474e-59	51.45	RAB1B, member RAS oncogene family [Source:MGI Symb...	[more]
Rab13	1.012e-57	50.00	RAB13, member RAS oncogene family [Source:MGI Symb...	[more]
Rab35	4.907e-57	52.05	RAB35, member RAS oncogene family [Source:MGI Symb...	[more]

BLAST of Ras-related protein Rab-1B, putative vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q05974\|RAB1A_LYMST	2.817e-60	50.00	Ras-related protein Rab-1A OS=Lymnaea stagnalis OX...	[more]
sp\|P31584\|YPTV1_VOLCA	4.134e-60	54.44	GTP-binding protein yptV1 OS=Volvox carteri OX=306...	[more]
sp\|Q39571\|YPTC1_CHLRE	9.152e-60	54.44	GTP-binding protein YPTC1 OS=Chlamydomonas reinhar...	[more]
sp\|Q52NJ2\|RAB1A_PIG	9.745e-60	52.30	Ras-related protein Rab-1A OS=Sus scrofa OX=9823 G...	[more]
sp\|P22125\|RAB1_DIPOM	1.011e-59	50.27	Ras-related protein ORAB-1 OS=Diplobatis ommata OX...	[more]

BLAST of Ras-related protein Rab-1B, putative vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A1A8N8D2	4.099e-62	54.60	Uncharacterized protein (Fragment) OS=Nothobranchi...	[more]
A0A1J1H3I3	6.014e-62	54.84	Ras-related protein Rab-1B, putative OS=Plasmodium...	[more]
A0A139XVT8	1.168e-61	54.05	Putative small GTP binding protein rab1a OS=Toxopl...	[more]
A0A125YLS2	1.168e-61	54.05	Small GTP binding protein rab1a, putative OS=Toxop...	[more]
A0A086JV56	1.168e-61	54.05	Putative small GTP binding protein rab1a OS=Toxopl...	[more]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
zgc:171927	8.553e-61	51.63	ras-related protein ORAB-1-like [Source:NCBI gene;...	[more]
rab1ab	1.293e-60	52.60	ras-related protein Rab-1A [Source:NCBI gene;Acc:1...	[more]
rab13	1.440e-58	46.53	RAB13, member RAS oncogene family [Source:NCBI gen...	[more]
ENSAMXT00000045110.1	1.456e-58	50.87	ras-related protein Rab-1A [Source:NCBI gene;Acc:1...	[more]
rab1ba	1.928e-58	51.46	zRAB1B, member RAS oncogene family a [Source:ZFIN;...	[more]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rab1aa	2.067e-62	52.87	RAB1A, member RAS oncogene family a [Source:ZFIN;A...	[more]
rab8a	3.441e-55	48.55	RAB8A, member RAS oncogene family [Source:ZFIN;Acc...	[more]
rab3c	8.168e-55	46.55	RAB3C, member RAS oncogene family [Source:ZFIN;Acc...	[more]
ENSPMAT00000002219.1	1.091e-53	47.06	pep scaffold:Pmarinus_7.0:GL483980:50:9020:-1 gene...	[more]
RAB2B	1.367e-52	48.24	RAB2B, member RAS oncogene family [Source:HGNC Sym...	[more]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5


Match Name	E-value	Identity	Description
YPT1	8.667e-60	51.09	Rab family GTPase; involved in the ER-to-Golgi ste...	[more]
SEC4	8.048e-56	51.46	Rab family GTPase; essential for vesicle-mediated ...	[more]
YPT32	2.053e-51	47.06	Rab family GTPase involved in the exocytic pathway...	[more]
YPT31	4.295e-50	46.75	Rab family GTPase; involved in the exocytic pathwa...	[more]
VPS21	2.033e-38	40.12	Endosomal Rab family GTPase; required for endocyti...	[more]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO40167	1.725e-59	51.76	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO42144	3.724e-58	50.87	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO47471	7.857e-57	48.82	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO41018	6.837e-56	49.70	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO40845	2.398e-55	48.31	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Ras-related protein Rab-1B, putative vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rab1aa	1.271e-60	52.60	ras-related protein Rab-1A [Source:NCBI gene;Acc:1...	[more]
rab1ab	1.448e-60	52.60	ras-related protein ORAB-1 [Source:NCBI gene;Acc:1...	[more]
ENSORLT00000032751.1	3.188e-57	50.00	RAB13, member RAS oncogene family [Source:NCBI gen...	[more]
zgc:171927	1.088e-56	52.07	ras-related protein ORAB-1-like [Source:NCBI gene;...	[more]
zgc:171927	1.088e-56	52.07	ras-related protein ORAB-1-like [Source:NCBI gene;...	[more]

BLAST of Ras-related protein Rab-1B, putative vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000030620.1	1.377e-137	100.00	SMESG000030620.1	[more]
SMESG000030620.1	3.734e-108	84.21	SMESG000030620.1	[more]
SMESG000030619.1	1.764e-63	55.23	SMESG000030619.1	[more]
SMESG000026323.1	8.854e-60	49.73	SMESG000026323.1	[more]
SMESG000049854.1	3.159e-59	49.19	SMESG000049854.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30017581 ID=SMED30017581|Name=Ras-related protein Rab-1B, putative|organism=Schmidtea mediterranea sexual|type=transcript|length=683bp
CAATGGAATTTCGATTGAATTTGGTTATTTTTTGACATAATTTTGGTAGA
TATAATTTCGATGGACCAAAATTATGATTATTTATTGAAATTAGTTTTAA
TTGGTGATTCGAAGGTCGGCAAGTCGAGCTTGCTTGTGAGATTCGTCGAC
GACATCTTCAGCGATTCTTACATTTCAACGATTGGTGTAGATTTTAAAAC
TCTGGTTACTGAAATAAATGAGGAAAAGGTGAAGCTGCAAATGTGGGATA
CCTCAGGACAAAAGAGGTTTGACACAATCACCACATCATATTATCGTGGA
TCATCGGGCTTCCTGCTAGTATACGACGTGACCGACCGAAATTCCTTCAC
AAGGTTAAGCGAGTGGATGACAAGAATAAATAAATCAAGTGATAAAAACT
GTAAAATAATTCTTGTTGGTAACAAAAGCGATCAAAAAGACAAGCGAGAA
ATAACGTATGAAGAGGGGAAACAGTTTGCTGCCACCAACGAAATCATGTT
CTGCGAAACCAGTGCGAAATCTGCAAACGTTGATGAAGCTTTCAAAACCT
TGGCAACGGAAATAATTCGGAAAGTTTATTTGATTAACGTAAGTGAACAA
CAGAAAAAATCCAAGTTATGTCGGCTGTTCTGAAGGAATGTGTCTTATTT
CCTTATCTTGCTTAGATATTTTCAGATCGGAAG

protein sequence of SMED30017581-orf-1

>SMED30017581-orf-1 ID=SMED30017581-orf-1|Name=SMED30017581-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=191bp
MDQNYDYLLKLVLIGDSKVGKSSLLVRFVDDIFSDSYISTIGVDFKTLVT
EINEEKVKLQMWDTSGQKRFDTITTSYYRGSSGFLLVYDVTDRNSFTRLS
EWMTRINKSSDKNCKIILVGNKSDQKDKREITYEEGKQFAATNEIMFCET
SAKSANVDEAFKTLATEIIRKVYLINVSEQQKKSKLCRLF*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **molecular function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000034	epidermis
PLANA:0000418	head
PLANA:0002089	reproductive organ

Vocabulary: **INTERPRO**
Term	Definition
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase
IPR027417	P-loop_NTPase

Vocabulary: **biological process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

Vocabulary: **cellular component**
Term	Definition
GO:0005622	intracellular

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 146..168 score: 24.97 coord: 112..125 score: 47.51 coord: 9..30 score: 52.68 coord: 32..48 score: 38.57 coord: 50..72 score: 39.55
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 14..189 e-value: 5.8E-4 score: 7.9
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 6..171 e-value: 1.5E-35 score: 134.1
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 9..171 e-value: 1.3E-82 score: 290.4
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 11..172 e-value: 4.3E-11 score: 22.6
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 1..187 e-value: 2.0E-63 score: 215.4
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 3..187
None	No IPR available	PANTHER	PTHR24073:SF963	RAS-RELATED PROTEIN RAB-1A	coord: 3..187
None	No IPR available	PROSITE	PS51419	RAB	coord: 4..190 score: 32.847
None	No IPR available	CDD	cd00154	Rab	coord: 9..166 e-value: 1.69225E-78 score: 229.265
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 10..169 e-value: 5.1E-58 score: 195.3
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 8..164 e-value: 6.8E-31 score: 105.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 3..185