SMED30017441

Overview
NameSMED30017441
Smed IDSMED30017441
Length (bp)734
Neoblast Clusters

Zeng et. al., 2018



 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30017441

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 5

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
reproductive organSMED30017441h1SMcG0020766 Contig42062uc_Smed_v2PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30017441h1SMcG0020766 Contig42062newmark_estsPMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
copulatory apparatusSMED30017441h1SMcG0020766 Contig1640GPL15192PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
copulatory apparatusSMED30017441h1SMcG0022942 Contig1640GPL15192PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
copulatory apparatusSMED30017441h1SMcG0022942 PL030016B10A10smed_ncbi_20240424PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
Note: Hover over icons to view figure legend
Alignments
SMED30017441 aligns in the following genomic locations:
Alignment LocationAlignment Score
v31.022939:1672..2512 -3575
Homology
[Close]
BLAST of SMED30017441 vs. Ensembl Human
Match: TG (thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764])

HSP 1 Score: 65.4698 bits (158), Expect = 1.578e-11
Identity = 34/103 (33.01%), Postives = 48/103 (46.60%), Query Frame = -3 
Query:   88 FIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYFNINENSNCKCGLDKYLYSLNMAVG--------IIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTS 372
            F+P C T G Y  VQC +  C+C +  GK++           C    +K    +   +G         +  C   G + P+QC  S CYCVDA+G+ IPGT S
Sbjct:  616 FVPSCTTEGSYEDVQCFSGECWCVNSWGKELPGSRVRGGQPRCPTDCEKQRARMQSLMGSQPAGSTLFVPACTSEGHFLPVQCFNSECYCVDAEGQAIPGTRS 718
[Close]
BLAST of SMED30017441 vs. Ensembl Zebrafish
Match: nid2a (nidogen 2a (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-030827-2])

HSP 1 Score: 59.3066 bits (142), Expect = 3.702e-10
Identity = 46/144 (31.94%), Postives = 66/144 (45.83%), Query Frame = -3 
Query:   88 NCSKNPLTTKCYQEYDKVMKN----LLFGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKI--------SNYFNINENSNCKCGLDKYLYSLNMAVG-------IIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 450
            NC  +P  T+C Q  D +          G+FIP C+  G Y P+QC   T  C+C    G++         S   N +E    K   +++  SL    G        I  C+E G YRP QC GS+  C+CVD +G++  GT +
Sbjct:   45 NCYGHP-KTRCEQHRDSLQSGDGGVPAVGAFIPQCDEEGQYRPLQCHGSTGHCWCVDNRGQERAGTRTPPGSPPRNCDEPVRPKTHCEQHRDSLQSENGGVPVVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDNRGQERAGTRT 187
[Close]
BLAST of SMED30017441 vs. Ensembl Zebrafish
Match: nid2a (nidogen 2a (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-030827-2])

HSP 1 Score: 55.8398 bits (133), Expect = 6.771e-9
Identity = 41/136 (30.15%), Postives = 62/136 (45.59%), Query Frame = -3 
Query:   88 TKCYQEYDKVMKN----LLFGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKI--------SNYFNINENSNCKCGLDKYLYSLNMAVG-------IIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 426
            T+C Q  D +        + G+FIP C+  G Y   QC   T  C+C    G++         S   N ++    K   +++  SL    G        I  C+E G YRP QC GS+  C+CVD++G++  GT +
Sbjct:  112 TQCEQHRDSLQSGNDGVPVVGAFIPQCDEEGQYRTQQCHGSTGHCWCVDNRGQERAGTRTPPGSPRVNCDQPVRPKTQCEQHRDSLQSGDGGVPAVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDSRGQERAGTRT 247

HSP 2 Score: 53.1434 bits (126), Expect = 6.116e-8
Identity = 41/137 (29.93%), Postives = 61/137 (44.53%), Query Frame = -3 
Query:   88 TKCYQEYDKVMKN----LLFGSFIPCCNTNGIYCPVQC--PTNICYC------------SSPDGKKISNYFNINENSNCKCGLDKYLYSLNMAVGI----IFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 426
            T C Q  D +        + G+FIP C+  G Y P QC   T  C+C            + P   +++    +   + C+   D  L S N  V +    I  C+E G YR  QC GS+  C+CVD +G++  GT +
Sbjct:   36 THCEQHRDSLQSGDGGVPVVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDNRGQERAGTRTPPGSPRVNCDQPVRPKTQCEQHRDS-LQSGNDGVPVVGAFIPQCDEEGQYRTQQCHGSTGHCWCVDNRGQERAGTRT 171
[Close]
BLAST of SMED30017441 vs. Ensembl Zebrafish
Match: nid2a (nidogen 2a (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-030827-2])

HSP 1 Score: 54.6842 bits (130), Expect = 1.047e-8
Identity = 39/142 (27.46%), Postives = 59/142 (41.55%), Query Frame = -3 
Query:   88 TKCYQEYDKVMKN----LLFGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKISNYFNINENSNCKCGL--------------DKYLYSLNMAVG-------IIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 426
            T+C Q  D +          G+FIP C+  G Y P QC   T  C+C    G++ +       +    C                +++  SL    G        +  C+  G + P+QC G S  C+CVDA G+++PGT S
Sbjct:   35 TQCEQHRDSLQSGDGGVPAVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDSRGQERAGTRTPPGSPRVNCDQPVIVPPTQRPESVCERWRASLLQQYGGQPDSQHYLPQCDSAGEFNPVQCYGGSSYCWCVDANGREVPGTRS 176
[Close]
BLAST of SMED30017441 vs. Ensembl Zebrafish
Match: nid2a (nidogen 2a (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-030827-2])

HSP 1 Score: 55.4546 bits (132), Expect = 2.141e-8
Identity = 43/138 (31.16%), Postives = 63/138 (45.65%), Query Frame = -3 
Query:   88 LTTKCYQEYDKVMKN----LLFGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKI--------SNYFNINENSNCKCGLDKYLYSLNMAVG-------IIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 432
            L T+C Q  D +          G+FIP C+  G Y P QC   T  C+C    G++         S   N ++    K   +++  SL    G        I  C+E G YRP QC GS+  C+CVD++G++  GT +
Sbjct:  987 LRTRCEQHRDSLQSGDGGVPAVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDNRGQERAGTRTPPGSPRVNCDQPVRPKTHCEQHRDSLQSGDGGIPVVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDSRGQERAGTRT 1124

HSP 2 Score: 54.299 bits (129), Expect = 4.991e-8
Identity = 42/136 (30.88%), Postives = 61/136 (44.85%), Query Frame = -3 
Query:   88 TKCYQEYDKVMKN----LLFGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKI--------SNYFNINENSNCKCGLDKYLYSLNMAVG-------IIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 426
            T C Q  D +        + G+FIP C+  G Y P QC   T  C+C    G++         S   N ++    K   +++  SL    G        I  C+E G YRP QC GS+  C+CVD +G++  GT +
Sbjct: 1065 THCEQHRDSLQSGDGGIPVVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDSRGQERAGTRTPPGSPRVNCDQPVRSKTHCEQHRDSLQSGDGGVPVVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDNRGQERAGTRT 1200

HSP 3 Score: 54.299 bits (129), Expect = 5.421e-8
Identity = 42/136 (30.88%), Postives = 62/136 (45.59%), Query Frame = -3 
Query:   88 TKCYQEYDKVMKN----LLFGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKISNYF--------NINENSNCKCGLDKYLYSLNMAVG-------IIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 426
            T+C Q  D +          G+FIP C+  G Y P+QC   T  C+C    G++ +           N +E    K   +++  SL    G        I  C+E G YRP QC GS+  C+CVD +G++  GT +
Sbjct:  837 TRCEQHRDSLQSGDGGVPAVGAFIPQCDEEGQYRPLQCHGSTGHCWCVDNRGQERAGTRTPPGSPPRNCDEPVRPKTHCEQHRDSLQSENGGVPVVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDNRGQERAGTRT 972

HSP 4 Score: 53.1434 bits (126), Expect = 1.273e-7
Identity = 41/136 (30.15%), Postives = 62/136 (45.59%), Query Frame = -3 
Query:   88 TKCYQEYDKVMKN----LLFGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKI--------SNYFNINENSNCKCGLDKYLYSLNMAVG-------IIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 426
            T C Q  D +        + G+FIP C+  G Y P QC   T  C+C    G++         S   N ++  + +   +++  SL    G        I  C+E G YRP QC GS+  C+CVD +G++  GT +
Sbjct:  913 THCEQHRDSLQSENGGVPVVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDNRGQERAGTRTPPGSPRVNCDQPVHLRTRCEQHRDSLQSGDGGVPAVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDNRGQERAGTRT 1048
[Close]
BLAST of SMED30017441 vs. Ensembl Zebrafish
Match: nid2a (nidogen 2a (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-030827-2])

HSP 1 Score: 53.1434 bits (126), Expect = 6.829e-8
Identity = 35/124 (28.23%), Postives = 54/124 (43.55%), Query Frame = -3 
Query:   88 LFGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKISNYFNINENSNCKCGL--------------DKYLYSLNMAVG-------IIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 384
            + G+FIP C+  G Y P QC   T  C+C    G++ +       +    C                +++  SL    G        +  C+  G + P+QC G S  C+CVDA G+++PGT S
Sbjct:   14 VVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDSRGQERAGTRTPPGSPRVNCDQPVIVPPTQRPESVCERWRASLLQQYGGQPDSQHYLPQCDSAGEFNPVQCYGGSSYCWCVDANGREVPGTRS 137
[Close]
BLAST of SMED30017441 vs. Ensembl Xenopus
Match: amd1 (adenosylmethionine decarboxylase 1 [Source:Xenbase;Acc:XB-GENE-484611])

HSP 1 Score: 56.9954 bits (136), Expect = 1.115e-8
Identity = 32/104 (30.77%), Postives = 48/104 (46.15%), Query Frame = -3 
Query:   85 FIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYFNINENSNC--KCGLDKYLYSLNM------AVGIIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTSV 372
            +IP C  +G Y  +QC    C+C    G++I        +  C  KC  ++Y  +         A   I  C+  G +  +QC G  C+CVD +G+ IPGT  V
Sbjct:  616 YIPACKEDGRYNDIQCSKAECWCVDDQGREIDRTRTQGTHPRCPTKCEKERYRQTAVRESLPPGAELFIPACDLEGHFLTVQCTGKLCFCVDLEGRIIPGTQKV 719
[Close]
BLAST of SMED30017441 vs. Ensembl Xenopus
Match: smoc1 (SPARC related modular calcium binding 1 [Source:NCBI gene;Acc:100145733])

HSP 1 Score: 51.9878 bits (123), Expect = 3.089e-7
Identity = 48/163 (29.45%), Postives = 69/163 (42.33%), Query Frame = -3 
Query:   82 LEVCVSGNCSKNPLTTKCYQEYDKVM---KNLLFGSFIPCCNTNGIYCPVQCPT--NICYCSSPDGKKISNYFNINENSNCKCGLDKYLYS-----------------------LNMAVGIIF-NCNENGSYRPIQCLGSSCYC----VDAQGKKIPGTTSVH 471
            L V   G C K+   +KC  E  + +   K      FIP CN +G +  VQC T    C+C +PDGK +S     N+   C   + +   S                       LN   GI+   C   G Y+P+QC  S+ YC    VD  G+ +PGT++ +
Sbjct:   79 LSVTHRGRC-KDAGQSKCRLERTQALEQAKKPQEAVFIPECNEDGSFTQVQCHTFTGYCWCVTPDGKPVSGSSVQNKTPVCSGSVTEKPSSQGNSGRRANSCDQERQSALEEAKLNPRDGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDT-GRPLPGTSTRY 239
[Close]
BLAST of SMED30017441 vs. Ensembl Xenopus
Match: nid2 (nidogen 2 [Source:NCBI gene;Acc:100036716])

HSP 1 Score: 51.6026 bits (122), Expect = 5.859e-7
Identity = 38/151 (25.17%), Postives = 64/151 (42.38%), Query Frame = -3 
Query:   88 GNCSKNPLTTKCYQEYDKVMKNL-------LFGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKISNYFNINENSNCKCG-----------LDKYLYSLNMAVG-------IIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 453
            G     PL T C +   +++  L         G F+P C+  G Y  +QC   T  C+C    G++I+            CG            +++  SL    G        +  C++ G + P+QC G+S  C+CVD +G++I G+ +
Sbjct:  994 GETGPEPLKTPCLERRQQLLGQLHPRGPRPAVGQFVPECDAEGNYVSLQCHGSTGHCWCVDKLGEEIAGTRTPPGRPGPNCGETEPTRRPQTVCERWKQSLIEHYGGKPGGEHYVPQCDQYGDFSPLQCHGNSGYCWCVDKEGREIEGSRT 1144
[Close]
BLAST of SMED30017441 vs. Ensembl Xenopus
Match: nid2 (nidogen 2 [Source:NCBI gene;Acc:100036716])

HSP 1 Score: 51.2174 bits (121), Expect = 7.680e-7
Identity = 38/151 (25.17%), Postives = 64/151 (42.38%), Query Frame = -3 
Query:   88 GNCSKNPLTTKCYQEYDKVMKNL-------LFGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKISNYFNINENSNCKCG-----------LDKYLYSLNMAVG-------IIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 453
            G     PL T C +   +++  L         G F+P C+  G Y  +QC   T  C+C    G++I+            CG            +++  SL    G        +  C++ G + P+QC G+S  C+CVD +G++I G+ +
Sbjct: 1071 GETGPEPLKTPCLERRQQLLGQLHPRGPRPAVGQFVPECDAEGNYVSLQCHGSTGHCWCVDKLGEEIAGTRTPPGRPGPNCGETEPTRRPQTVCERWKQSLIEHYGGKPGGEHYVPQCDQYGDFSPLQCHGNSGYCWCVDKEGREIEGSRT 1221

HSP 2 Score: 50.447 bits (119), Expect = 1.202e-6
Identity = 41/139 (29.50%), Postives = 63/139 (45.32%), Query Frame = -3 
Query:   88 PLTTKCYQEYDKVMKN---LLFGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKISNYFNINENSNCKCG-----------LDK----YLYSLNMAVG-IIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 435
            PL T C ++  ++         G F+P C+  G Y P+QC   T  C+C    G++I+            CG           L+K    +      AVG  +  C+  G+Y P+QC GS+  C+CVD  G++I GT +
Sbjct:  923 PLKTPCLEKRQQLHPRGPRPAVGQFVPECDVEGNYVPLQCHGSTGHCWCVDKLGEEITGTRTPPGRPAPNCGERGPEPLKTPCLEKRQQLHPRGPRPAVGQFVPECDVEGNYVPLQCHGSTGHCWCVDKLGEEITGTRT 1061
[Close]
BLAST of SMED30017441 vs. Ensembl Xenopus
Match: nid2 (nidogen 2 [Source:NCBI gene;Acc:100036716])

HSP 1 Score: 51.2174 bits (121), Expect = 8.459e-7
Identity = 42/172 (24.42%), Postives = 71/172 (41.28%), Query Frame = -3 
Query:   88 CNDSRGCTDLEVCVSGNCSK----------NPLTTKCYQEYDKVMKN---LLFGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKISNYFNINENSNCKCG-----------LDKYLYSLNMAVG-------IIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 498
            C+    CT+     S  C+            PL T C ++  ++         G F+P C+  G Y P+QC   T  C+C    G++I+            CG            +++  SL    G        +  C++ G + P+QC G+S  C+CVD +G++I G+ +
Sbjct:  858 CHPDASCTNTLGSFSCRCNSGYEGDGFQCPEPLKTPCLEKRQQLHPRGPRPAVGQFVPECDVEGNYVPLQCHGSTGHCWCVDKLGEEITGTRTPPGRPAPNCGERGPEPLKTPLCERWKQSLIEHYGGKPGGEHYVPQCDQYGDFSPLQCHGNSGYCWCVDKEGREIEGSRT 1029
[Close]
BLAST of SMED30017441 vs. Ensembl Mouse
Match: Tg (thyroglobulin [Source:MGI Symbol;Acc:MGI:98733])

HSP 1 Score: 60.077 bits (144), Expect = 7.571e-10
Identity = 34/103 (33.01%), Postives = 44/103 (42.72%), Query Frame = -3 
Query:   88 FIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYFNINENSNCKCGLDKY------LYSLNMAVGIIF--NCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTS 372
            F+P C   G Y  +QC    C+C    GK++           C    +K       L S   A    F   C   G + P+QC  S CYCVD +G+ IPGT S
Sbjct:  616 FVPSCTAGGSYEDIQCYAGECWCVDSRGKELDGSRVRGGRPRCPTKCEKQRAQMQSLASAQPAGSSFFVPTCTREGYFLPVQCFNSECYCVDTEGQVIPGTQS 718
[Close]
BLAST of SMED30017441 vs. UniProt/SwissProt
Match: sp|P01266|THYG_HUMAN (Thyroglobulin OS=Homo sapiens OX=9606 GN=TG PE=1 SV=5)

HSP 1 Score: 65.4698 bits (158), Expect = 7.576e-11
Identity = 34/103 (33.01%), Postives = 48/103 (46.60%), Query Frame = -3 
Query:   88 FIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYFNINENSNCKCGLDKYLYSLNMAVG--------IIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTS 372
            F+P C T G Y  VQC +  C+C +  GK++           C    +K    +   +G         +  C   G + P+QC  S CYCVDA+G+ IPGT S
Sbjct:  616 FVPSCTTEGSYEDVQCFSGECWCVNSWGKELPGSRVRGGQPRCPTDCEKQRARMQSLMGSQPAGSTLFVPACTSEGHFLPVQCFNSECYCVDAEGQAIPGTRS 718
[Close]
BLAST of SMED30017441 vs. UniProt/SwissProt
Match: sp|P06882|THYG_RAT (Thyroglobulin OS=Rattus norvegicus OX=10116 GN=Tg PE=1 SV=4)

HSP 1 Score: 64.6994 bits (156), Expect = 1.338e-10
Identity = 32/103 (31.07%), Postives = 46/103 (44.66%), Query Frame = -3 
Query:   88 FIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYFNINENSNCKCGLDKYLYSLNMAVG--------IIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTS 372
            F+P C   G Y  +QC    C+C +  GK++        +  C    +K    +    G         +  C   G + P+QC  S CYCVDA+G+ IPGT S
Sbjct:  616 FVPSCTAEGSYEDIQCYAGECWCVNSQGKEVEGSRVSGGHPRCPTKCEKQRAQMQNLAGAQPAGSSFFVPTCTSEGYFLPVQCFNSECYCVDAEGQVIPGTQS 718
[Close]
BLAST of SMED30017441 vs. UniProt/SwissProt
Match: sp|F1RRV3|THYG_PIG (Thyroglobulin OS=Sus scrofa OX=9823 GN=TG PE=1 SV=5)

HSP 1 Score: 64.3142 bits (155), Expect = 1.850e-10
Identity = 31/103 (30.10%), Postives = 46/103 (44.66%), Query Frame = -3 
Query:   88 FIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYFNINENSNCKCGLDKYLYSLNMAVG--------IIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTS 372
            F+P C   G Y  VQC    C+C    G++++          C    +K    +   +G         + +C   G + P+QC  S CYCVDA G+ IPGT +
Sbjct:  617 FVPSCTAEGSYEDVQCFAGECWCVDARGRELAGSRARGGRPRCPTACEKQRERMQSLLGRQPAGSSVFVPSCTREGHFLPVQCFSSDCYCVDADGQPIPGTRT 719
[Close]
BLAST of SMED30017441 vs. UniProt/SwissProt
Match: sp|P01267|THYG_BOVIN (Thyroglobulin OS=Bos taurus OX=9913 GN=TG PE=1 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 3.656e-10
Identity = 31/103 (30.10%), Postives = 46/103 (44.66%), Query Frame = -3 
Query:   88 FIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYFNINENSNCKCGLDKYLYSLNMAVG--------IIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTS 372
            F+P C   G Y  VQC    C+C    G++++          C    +K    +   +G         +  C   G++ P+QC  S CYCVD +G+ IPGT S
Sbjct:  615 FVPACTAEGSYEEVQCFAGDCWCVDAQGRELAGSRVRGGRPRCPTECEKQRARMQSLLGSQPAGSSLFVPACTSKGNFLPVQCFNSECYCVDTEGQPIPGTRS 717
[Close]
BLAST of SMED30017441 vs. UniProt/SwissProt
Match: sp|O08710|THYG_MOUSE (Thyroglobulin OS=Mus musculus OX=10090 GN=Tg PE=1 SV=3)

HSP 1 Score: 60.077 bits (144), Expect = 5.296e-9
Identity = 34/103 (33.01%), Postives = 44/103 (42.72%), Query Frame = -3 
Query:   88 FIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYFNINENSNCKCGLDKY------LYSLNMAVGIIF--NCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTS 372
            F+P C   G Y  +QC    C+C    GK++           C    +K       L S   A    F   C   G + P+QC  S CYCVD +G+ IPGT S
Sbjct:  616 FVPSCTAGGSYEDIQCYAGECWCVDSRGKELDGSRVRGGRPRCPTKCEKQRAQMQSLASAQPAGSSFFVPTCTREGYFLPVQCFNSECYCVDTEGQVIPGTQS 718
[Close]
BLAST of SMED30017441 vs. TrEMBL
Match: A0A210PY59 (Thyroglobulin OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT02202 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.244e-19
Identity = 47/110 (42.73%), Postives = 64/110 (58.18%), Query Frame = -3 
Query:   55 GSFIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYFNIN--ENSNCKCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTSVHIEKANELKC 378
            G+  P C  +G Y P QC  ++C C S  G +I+  F+I     S+C C  D++ YSL   +G +F C   GSY PIQC GS CYCVD +G++I G  + HI   + LKC
Sbjct:   50 GTVKPRCLEDGTYAPRQCRGSVCRCVSAQGTRITEDFSIGLAYQSDCSCARDEHDYSLLQIMGKMFFCTPIGSYHPIQCTGSVCYCVDKKGQQI-GQETAHIGSQDSLKC 158
[Close]
BLAST of SMED30017441 vs. TrEMBL
Match: A0A2T7PUN3 (Uncharacterized protein OS=Pomacea canaliculata OX=400727 GN=C0Q70_04128 PE=4 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.163e-18
Identity = 44/130 (33.85%), Postives = 71/130 (54.62%), Query Frame = -3 
Query:   55 LTTKCYQEYDKVMKNLLFGSFIPCCNT--NGIYCPVQCPTNICYCSSPDGKKISNYFN--INENSNCKCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTSVHIEKANELKC 432
            +   C +E D   +N   G F+P C+     +Y P+QC  ++CYC S DG ++S+Y N  I    NC+C  ++  +      G IFNC  +G+Y P +C GS C+CV+  G ++      +I +A+E +C
Sbjct:   20 IAASCQEELDSRRQNYAIGGFLPRCDAGNTALYSPLQCHGSVCYCVSSDGTRLSDYSNIPIGTPGNCECAREEDEFRKTGMRGQIFNCAPDGTYSPTRCTGSRCFCVNRDGTRMQEYLEANIWEASECEC 149

HSP 2 Score: 82.0333 bits (201), Expect = 4.842e-15
Identity = 45/129 (34.88%), Postives = 64/129 (49.61%), Query Frame = -3 
Query:   55 PLTTKCYQEYDKVMKNLLFGSFIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYF--NINENSNCKCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTSVHIEKANELKC 435
            P   +C +E D+  K  + G    C   +G Y P +C  + C+C + DG ++  Y   NI E S C+C   K  Y+     G+ FNC  +GSY   QC GS+C CV   G  IP   S HI  +++  C
Sbjct:   83 PGNCECAREEDEFRKTGMRGQIFNCA-PDGTYSPTRCTGSRCFCVNRDGTRMQEYLEANIWEASECECARAKADYAERRIRGLRFNCERDGSYGAKQCTGSTCRCVKRNGNPIPEFQSFHIAHSSDCGC 210
[Close]
BLAST of SMED30017441 vs. TrEMBL
Match: A0A2T7PUS9 (Uncharacterized protein OS=Pomacea canaliculata OX=400727 GN=C0Q70_04132 PE=4 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.491e-18
Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = -3 
Query:   55 LTTKCYQEYDKVMKNLLFGSFIPCCNT--NGIYCPVQCPTNICYCSSPDGKKISNYFNI--NENSNCKCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTSVHIEKANELKC 432
            +   C +E D   +N   G F+P C+   + +Y P+QC  + CYC S DG  +S+Y NI     SNC+C   +Y +S     G IFNC  +G+Y P +C GS C+CV   G ++       I +A+   C
Sbjct:   20 IAASCQEELDSRRQNYAIGGFLPRCDAGNSALYSPIQCRGSACYCVSSDGTMLSDYSNIPFGTPSNCECARKEYEFSKARMKGQIFNCAPDGTYSPTRCYGSRCFCVYRNGARMQEYQDRSIGQASTCAC 149
[Close]
BLAST of SMED30017441 vs. TrEMBL
Match: A0A210QMT8 (Thyroglobulin OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT03543 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.014e-17
Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = -3 
Query:   55 FGSFIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYFNINE--NSNCKCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTSVHIEKANELKC 381
             G+  P C  +G Y P QC  ++C C + DG K+++ F I E  N++C C  +K  Y L+  +G  F C + GSY P+QC GS CYC D +G+++ G  +V+I   + LKC
Sbjct:   56 IGAIKPQCLKDGTYTPRQCLGSVCNCVAADGSKLTDDFGIGEAVNTDCSCAREKQEYKLSGKIGKSFKCTDIGSYAPVQCTGSVCYCSDIKGQQL-GQETVNIGFIDTLKC 165
[Close]
BLAST of SMED30017441 vs. TrEMBL
Match: A0A194AKI3 (Uncharacterized protein OS=Pinctada fucata OX=50426 PE=4 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.958e-15
Identity = 44/113 (38.94%), Postives = 61/113 (53.98%), Query Frame = -3 
Query:   55 LFGSFIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNY-FNINENSN--CKCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTSVHIEKANELKC 384
            L G+  P C+  G Y P QC  + CYC S +GK+IS Y  N+ E     C+C  D+  Y  +  +G  F C  +GSY+  QC G  C+C D  G K+  + SVHI +  +L C
Sbjct:  124 LLGAPTPSCDGEGYYQPKQCQGSQCYCVSKNGKEISGYTANVWEAQQMTCQCARDQAEYMASGLIGKFFYCTSDGSYQTYQCQGDVCFCADTNGVKMDHSPSVHISQVTKLNC 236
[Close]
BLAST of SMED30017441 vs. Ensembl Cavefish
Match: nid2a (nidogen 2a (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-030827-2])

HSP 1 Score: 59.3066 bits (142), Expect = 1.042e-9
Identity = 45/158 (28.48%), Postives = 71/158 (44.94%), Query Frame = -3 
Query:   88 DSRGCTDLEVCVSGNCSKNPLTTKCYQEYDKVMKN-----LLFGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKI--------SNYFNINENSNCKCGLDKYLYSLNMAVG------IIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 492
            D R C D++     +       T+C Q  D + +       L G+F+P C+  G Y P QC   T  C+C    G++         S  FN +     K   +++  SL    G       +  C++ G YRP QC GS+  C+CVD++G++  GT +
Sbjct:  750 DGRTCRDVDEYGHCHHQHERPKTQCEQHRDSLQRGSDDGLTLEGAFVPECDEQGQYRPQQCHGSTGHCWCVDSRGQERQGTRTPPGSPQFNCDAPERPKTQCEQHRDSLQRGDGSPPVGAYVPQCDDQGQYRPQQCHGSTGHCWCVDSRGQERQGTRT 907

HSP 2 Score: 53.1434 bits (126), Expect = 1.084e-7
Identity = 39/134 (29.10%), Postives = 63/134 (47.01%), Query Frame = -3 
Query:   88 TKCYQEYDKVMK---NLLFGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKI--------SNYFNINENSNCKCGLDKYLYSLNMAVG------IIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 426
            T+C Q  D + +   +   G+++P C+  G Y   QC   T  C+C    G++         S  FN +     K   +++  SL    G       +  C+E G YRP QC GS+  C+CVD++G++  GT +
Sbjct:  996 TQCEQHRDSLQRGDGSPPVGAYVPQCDDQGQYRQQQCHGSTGHCWCVDSRGQERQGTRTPPGSPQFNCDAPERPKTQCEQHRDSLQRGDGSPPIGAYVPQCDEQGQYRPQQCHGSTGHCWCVDSRGQERQGTRT 1129

HSP 3 Score: 51.9878 bits (123), Expect = 2.340e-7
Identity = 40/134 (29.85%), Postives = 63/134 (47.01%), Query Frame = -3 
Query:   88 TKCYQEYDKVMK---NLLFGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKI--------SNYFNINENSNCKCGLDKYLYSLNMAVG------IIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 426
            T+C Q  D + +   +   G+++P C+  G Y P QC   T  C+C    G++         S  FN +     K   +++  SL    G       +  C+E G YRP QC GS+  C+CVD +G++  GT +
Sbjct:  849 TQCEQHRDSLQRGDGSPPVGAYVPQCDDQGQYRPQQCHGSTGHCWCVDSRGQERQGTRTPPGSPRFNCDRP---KTQCEQHRDSLQRGDGSPPVGAFVPECDEQGQYRPQQCHGSTGHCWCVDIRGQERQGTRT 979
[Close]
BLAST of SMED30017441 vs. Ensembl Cavefish
Match: tg (thyroglobulin [Source:NCBI gene;Acc:103037495])

HSP 1 Score: 54.299 bits (129), Expect = 4.929e-8
Identity = 34/120 (28.33%), Postives = 54/120 (45.00%), Query Frame = -3 
Query:  112 PLTTKCYQEYDKVMKNLLFGS-FIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYFNINENSNCKCGLDKYLYSLNMAVGI-----------IFNCNENGSYRPIQCLGSSCYCVDAQG 435
            PL    +Q +D         S ++P C  +G Y  VQC  + C+C+   G+++    +I     C    +K      MA+ +           I  C E+G Y  +QCLG SC+C+D +G
Sbjct:  603 PLFQAVFQNFDVCSSPASPSSLYLPQCTEDGQYQAVQCQGSECWCADSQGQEVMGSRSIGYRPRCPSRCEK---ERMMAIAVKASSSAGSEVFIPKCEEDGEYVSLQCLGKSCFCLDQRG 719

HSP 2 Score: 53.1434 bits (126), Expect = 1.065e-7
Identity = 33/97 (34.02%), Postives = 50/97 (51.55%), Query Frame = -3 
Query:   94 IPCCNTNGIYCPVQCPTN-ICYCSSPDGKKISNYFNINENSNC--KCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGS--SCYCVDAQGKKIPGT 369
            IP C+ +G Y  VQC     C+C + DG +I      +    C   C L +    L+   G++  C ++G Y P+QC G+   C+CVD +G +I GT
Sbjct:   80 IPQCSEDGRYRYVQCNRGGECWCVNSDGTEIPGSRQNDTVVTCLTPCQLQRQRLLLSGDAGVVPRCLDSGEYEPVQCDGALGQCWCVDMEGMEIYGT 176
[Close]
BLAST of SMED30017441 vs. Ensembl Cavefish
Match: smoc2 (SPARC related modular calcium binding 2 [Source:NCBI gene;Acc:103022519])

HSP 1 Score: 48.1358 bits (113), Expect = 3.187e-6
Identity = 37/112 (33.04%), Postives = 54/112 (48.21%), Query Frame = -3 
Query:  169 LEVCVSGNCSKNPLTTKCYQEY---DKVMKNLLFGSFIPCCNTNGIYCPVQCP--TNICYCSSPDGKKISNYFNINENSNCK-CGLDKYL-----YSLNMAVGIIFNCNENG 471
            LEV + G C     T++C  E    ++  K L    F+P CN +G Y  VQC   T  C+C +P+GK IS     N+   C+   L+K        S++M +  I N +EN 
Sbjct:   72 LEV-IRGPCKD---TSRCVAEKKYTEQQAKKLFPQVFVPVCNPDGTYSEVQCHSYTGYCWCVTPNGKPISGTAVANKKPRCQGSKLEKATPREPGKSVSMQIFSILNADENA 179
[Close]
BLAST of SMED30017441 vs. Ensembl Sea Lamprey
Match: tg (thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1])

HSP 1 Score: 53.5286 bits (127), Expect = 1.488e-8
Identity = 32/99 (32.32%), Postives = 46/99 (46.46%), Query Frame = -3 
Query:   94 CCNTNGIYCPVQCPTNICYCSSPDGKKISNYFNINEN-----SNCKCGLDKYLYSL-NMAVG---IIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGT 363
            C    G Y PVQC    C+C    G++I+    +        S C+    + L +     VG    +  C+  G YRP+QC G  C+CV A G ++PGT
Sbjct:  610 CGEDGGAYEPVQCHGAACWCVDAHGREIAGTRAVGGAPPRCPSACEGERARALLARRGRPVGTPLFVPECDGAGDYRPVQCSGDRCFCVGAGGAEVPGT 708

HSP 2 Score: 46.595 bits (109), Expect = 3.563e-6
Identity = 18/34 (52.94%), Postives = 27/34 (79.41%), Query Frame = -3 
Query:   85 CNENG-SYRPIQCLGSSCYCVDAQGKKIPGTTSV 183
            C E+G +Y P+QC G++C+CVDA G++I GT +V
Sbjct:  610 CGEDGGAYEPVQCHGAACWCVDAHGREIAGTRAV 643
[Close]
BLAST of SMED30017441 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002848.1 (pep scaffold:Pmarinus_7.0:GL483853:4960:10548:-1 gene:ENSPMAG00000002602.1 transcript:ENSPMAT00000002848.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 45.0542 bits (105), Expect = 4.558e-6
Identity = 22/53 (41.51%), Postives = 30/53 (56.60%), Query Frame = -3 
Query:   94 CKCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGT 246
            C    +K  +S  +  G +  C+E G Y P QC GS+  C+CVD  GK+ PGT
Sbjct:   90 CHAEKEKLQHSKKLVGGFMPTCDEQGYYGPKQCHGSTGQCWCVDQYGKETPGT 142
[Close]
BLAST of SMED30017441 vs. Ensembl Nematostella
Match: EDO40371 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S7C2])

HSP 1 Score: 55.0694 bits (131), Expect = 1.949e-9
Identity = 32/112 (28.57%), Postives = 54/112 (48.21%), Query Frame = -3 
Query:   79 FGSFIPCCNTNGIYCPVQCP--TNICYCSSPDGKKISNYFNINEN-------SNCKCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTSVHI 381
             G+++P C  +G Y  VQC   T  C+C   DGK+        +        + C+  +++ L +       +  C  +G+Y  +QC  S+  C+CVDAQG ++ GT S  +
Sbjct:    7 VGAYVPRCADDGSYETVQCHDGTRYCWCVDEDGKERPGTRQTGQPNCDPVPVTPCRAQVEQALKTPASLDRFVPRCTLDGAYEDVQCQESTGECWCVDAQGSELDGTRSTEL 118

HSP 2 Score: 53.5286 bits (127), Expect = 5.840e-9
Identity = 43/134 (32.09%), Postives = 63/134 (47.01%), Query Frame = -3 
Query:   94 NCSKNPLTTKCYQEYDKVMKNLL-FGSFIPCCNTNGIYCPVQCP--TNICYC-----SSPDGKKISNYFNINEN-SNCKCGLDKY---LYSLNMAVG-IIFNCNENGSYRPIQCLGS--SCYCVDAQGKKIPGT 450
            NC   P+T  C  + ++ +K       F+P C  +G Y  VQC   T  C+C     S  DG + +     +++ S   C  D+     +S  + VG  I  C  +GSY PIQC  S   C+CVD  G ++ GT
Sbjct:   52 NCDPVPVT-PCRAQVEQALKTPASLDRFVPRCTLDGAYEDVQCQESTGECWCVDAQGSELDGTRSTELVTCHKHMSPSVCQQDRMQALAWSGRLVVGAFIPRCRSDGSYDPIQCHESPGQCWCVDVHGNELTGT 184
[Close]
BLAST of SMED30017441 vs. Ensembl Nematostella
Match: EDO40364 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S7B5])

HSP 1 Score: 51.2174 bits (121), Expect = 5.265e-8
Identity = 37/122 (30.33%), Postives = 56/122 (45.90%), Query Frame = -3 
Query:   94 TKCYQEYDKVMKNLL-FGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKISNYFNIN-------ENSNCKCGLDKYLYSLNMAVG-IIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGT 426
            T+C  +  + ++     G F+P C  +G +  VQC   T  C+C    G +I      +        NS   C     + S+N A G  +  C  +G Y  +QC G+ CYCVD +G +I GT
Sbjct:   73 TECQSQVKQALETPSGKGRFVPRCKADGQFEEVQCNEWTGQCWCVDNSGIEIQGTRTKDFVSCPGQTNSLTVCQYKHQVSSVNAAPGAFVPQCRSDGGYDVVQCRGAVCYCVDKRGIEIQGT 194
[Close]
BLAST of SMED30017441 vs. Ensembl Nematostella
Match: EDO40370 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S7C1])

HSP 1 Score: 49.2914 bits (116), Expect = 2.003e-7
Identity = 35/109 (32.11%), Postives = 50/109 (45.87%), Query Frame = -3 
Query:   94 IPCCNTNGIYCPVQC--PTNICYCSSPDGKKISNYFN-------INENSNCKCGLDKYLYSLNMAVG------IIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGT 369
            +P C  +G Y  VQC   T  C+CSS DG +              NE S C+    K+ + +    G       +  C ++GSY  +QC   +  C+CVD  GK+ PGT
Sbjct:   91 VPNCRPDGSYSRVQCDKSTGECWCSSEDGSETPGTRTSGTLRCPANEFSACQ----KHRHRVQGMTGQAPVGAYVPRCADDGSYETVQCHDGTRYCWCVDEDGKERPGT 195

HSP 2 Score: 44.669 bits (104), Expect = 8.730e-6
Identity = 31/108 (28.70%), Postives = 48/108 (44.44%), Query Frame = -3 
Query:   88 FIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYFN-----------INENSNCKCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 372
            +IP C ++G Y  VQC T   YC   D K +  +             + E + C+    + L  L+     + NC  +GSY  +QC  S+  C+C    G + PGT +
Sbjct:   22 YIPHCKSDGRYEEVQCHTGTKYCWCVDEKGVEVWGTRTRTFIRCAAFVKEPTPCQRAKGEAL--LSPETKRVPNCRPDGSYSRVQCDKSTGECWCSSEDGSETPGTRT 127
[Close]
BLAST of SMED30017441 vs. Ensembl Nematostella
Match: EDO40372 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S7C3])

HSP 1 Score: 48.1358 bits (113), Expect = 4.941e-7
Identity = 34/116 (29.31%), Postives = 52/116 (44.83%), Query Frame = -3 
Query:   94 VMKNLLFGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKISNYFNINENSNCK------CGLDKY----LYSLNMAVGIIFNCNENGSYRPIQC--LGSSCYCVDAQGKKIPGT 399
            V ++     ++P C+ +G Y PVQC   T  C+C   DG +I           CK      C  ++Y       L +    + +C  +GSY  +QC  L   C+CVD  G ++ GT
Sbjct:   65 VSESTPADRYVPRCDASGGYEPVQCLSTTGHCWCVDKDGIEIRGTRRRGVRPVCKQGYNTPCERERYRALGWTGLRVTGLWVPDCRPDGSYESVQCHALSGYCWCVDRSGHELFGT 180
[Close]
BLAST of SMED30017441 vs. Ensembl Nematostella
Match: EDO40373 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S7C4])

HSP 1 Score: 48.1358 bits (113), Expect = 5.204e-7
Identity = 34/111 (30.63%), Postives = 51/111 (45.95%), Query Frame = -3 
Query:   88 GSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKISNYFNINEN--------SNCKCGLDKYLYSLNMAVGIIF--NCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 378
            GSF+P C ++G Y  VQC   T  C+C   DG +I                 S C+    +++  L +A    F   C   G Y  +QC  S+  C+CVD  G+++P T +
Sbjct:   75 GSFVPKCKSSGDYDTVQCHGSTGFCWCVDDDGNEIPATRVRGRPMCGLLAGLSQCQQERQRHMGVLGIAPPGRFVPACTSTGQYERVQCHSSTGYCWCVDKFGRELPNTRA 185
[Close]
BLAST of SMED30017441 vs. Ensembl Medaka
Match: ENSORLT00000046650.1 (pep primary_assembly:ASM223467v1:16:31876438:31883319:-1 gene:ENSORLG00000030206.1 transcript:ENSORLT00000046650.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 55.0694 bits (131), Expect = 3.607e-9
Identity = 30/100 (30.00%), Postives = 48/100 (48.00%), Query Frame = -3 
Query:   79 FIPCCNTNGIYCPVQCPTN-ICYCSSPDGKKISNYFNINENSNCKCGLDKYLYSLNMAVGI-IFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTSVHI 372
            F+P C   G Y   QC     C+C  P G+++     +       CG   +    NMA G+    C  +GS+ P+QC  +SC+CV   G+++ GT +  +
Sbjct:   57 FVPTCERGGSYSFTQCQQGGQCWCVDPSGREVPGTRQLG--GPLACGEKNHPLIANMAAGLQRRQCGPDGSFAPLQCDVTSCWCVTEYGQEVVGTRTPQL 154
[Close]
BLAST of SMED30017441 vs. Ensembl Medaka
Match: nid2a (nidogen 2 [Source:NCBI gene;Acc:101173773])

HSP 1 Score: 48.1358 bits (113), Expect = 4.795e-6
Identity = 38/138 (27.54%), Postives = 62/138 (44.93%), Query Frame = -3 
Query:   88 TKCYQEYDKVMKNL-----LFGSFIPCCNTNGIYCPVQC--PTNICYCSSPDGKKI--------SNYFNINENSNCKCGLDKYLYSL-------NMAVG-IIFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 426
            T+C    + V +       L G ++P C+ +G Y P QC   T  C+C    G++         S   + NE  + K   +++   +         +VG  +  C++NG Y P QC  S+  C+CVD  G++  GT S
Sbjct:  764 TRCEHHRESVQRTTEEGAPLLGVYVPQCDESGKYLPQQCHDSTGYCWCVDSTGQERTGTRTPPGSALVDCNEQPHYKTRCERHREHVLASEREDRPSVGAYVPQCDQNGEYVPQQCHTSTGYCWCVDGMGQERSGTRS 901
[Close]
BLAST of SMED30017441 vs. Ensembl Medaka
Match: nid2a (nidogen 2 [Source:NCBI gene;Acc:101173773])

HSP 1 Score: 48.1358 bits (113), Expect = 4.813e-6
Identity = 37/141 (26.24%), Postives = 62/141 (43.97%), Query Frame = -3 
Query:   88 TKCYQEYDKVMKNL-----LFGSFIPCCNTNGIYCPVQC--PTNICYC-----------SSPDGKKISNYFNINENSNCKCGLDKYLYSL-------NMAVGI-IFNCNENGSYRPIQCLGSS--CYCVDAQGKKIPGTTS 426
            T+C    + V +       L G ++P C+ +G Y P QC   T  C+C            +P G  + +    +E  + K   +++   +         +VG  +  C++NG Y P QC  S+  C+CVD  G++  GT S
Sbjct:  840 TRCEHHRESVQRTTEEGAPLLGVYVPQCDESGKYLPQQCHDSTGYCWCVDSTGQERTGTRTPPGSALVDCSRTDEQPHYKTRCERHREHVLASEREDRPSVGAYVPQCDQNGEYVPQQCHTSTGYCWCVDGMGQERSGTRS 980
[Close]
BLAST of SMED30017441 vs. Ensembl Medaka
Match: smoc2 (SPARC related modular calcium binding 2 [Source:NCBI gene;Acc:101173886])

HSP 1 Score: 47.3654 bits (111), Expect = 6.454e-6
Identity = 54/213 (25.35%), Postives = 81/213 (38.03%), Query Frame = -3 
Query:   19 LEVCVSGNCSKNPLTTKCYQEY---DKVMKNLLFGSFIPCCNTNGIYCPVQCP--TNICYCSSPDGKKISNYFNINENSNCKCGL------------------------------------------DKYLYSLNMAVG-------IIFNCNENGSYRPIQCLGSSCYC----VDAQGKKIPGTTSVHIEKANELKC*G----FPLNFCDLFK 471
            LEV + G C     T++C  E    ++  K L    F+P CN +G Y  VQC   T  C+C +P+G+ +S     N+   C+ G                                           D+ L S    V         I +C + G Y+P+QC  S+ YC    VD  G+ IP T++    +  + KC G    +P    D F+
Sbjct:   68 LEV-IRGPCKD---TSRCVAEKKYTEQQAKKLFPQVFVPVCNPDGTYSEVQCHSYTGYCWCVTPNGRPVSGSAVANKKPRCQGGRGFWLKASPLLFLSDITLQYPTLWTEQVRSRQNNRTRTSSFSCDQELQSALEEVKHQKPDAVFIPDCAQEGLYKPVQCHPSTGYCWCVLVDT-GRPIPATST----RFEQPKCDGNARAYPPKPKDHFR 271
[Close]
BLAST of SMED30017441 vs. Planmine SMEST
Match: SMESG000017161.1 (SMESG000017161.1)

HSP 1 Score: 328.176 bits (840), Expect = 1.359e-115
Identity = 162/166 (97.59%), Postives = 164/166 (98.80%), Query Frame = -3 
Query:   55 MNSVIGCVFLALIHASFGCNDSRGCTDLEVCVSGNCSKNPLTTKCYQEYDKVMKNLLFGSFIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYFNINENSNCKCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTSVHIEKANELKC 552
            MNSVIGCVFLALIHA+FGCNDS+GCTDLEVCVSGNCSKNPLTTKCYQEYDKVMKNLLFGSFIPCC TNGIYCPVQCPTNICYCSSPDGKKISNYFNINENSNCKCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGT SVHIEKANELKC
Sbjct:    1 MNSVIGCVFLALIHAAFGCNDSKGCTDLEVCVSGNCSKNPLTTKCYQEYDKVMKNLLFGSFIPCCKTNGIYCPVQCPTNICYCSSPDGKKISNYFNINENSNCKCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTISVHIEKANELKC 166
[Close]
BLAST of SMED30017441 vs. Planmine SMEST
Match: SMESG000017039.1 (SMESG000017039.1)

HSP 1 Score: 126.716 bits (317), Expect = 2.335e-36
Identity = 68/167 (40.72%), Postives = 96/167 (57.49%), Query Frame = -3 
Query:   55 MNSVIGCVFLALIHASFGCNDSRGCTDLEVCVSGNCSKNPLTTKCYQEYDKVMKNLLFGSFIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYFNINENSNCKCGLDKYLYSLNMAVGII-FNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTSVHIEKANELKC 552
            MN    CVF+ L+ A+ GC DS  C   +VC+SG C  NPLTTKC+Q Y K +K++   + IP C++NG Y PVQC    C+CS+ DG  I +Y +  + S+CKC      +  N    I  F C  +G+Y  +QC  ++C+C D  G ++PG  +V  EK   L C
Sbjct:    1 MNYRPICVFILLVEATRGCEDSFDCRPPKVCMSGKCYANPLTTKCFQIYGKAIKSMA-DTLIPRCDSNGNYAPVQCQNGKCWCSNRDGITIHDYPDAKKKSHCKCARASIEFKQNSDGPITAFFCKTDGNYGDVQCKQTTCFCTDEDGVRMPGKATVDYEKRKTLLC 166
[Close]
BLAST of SMED30017441 vs. Planmine SMEST
Match: SMESG000017143.1 (SMESG000017143.1)

HSP 1 Score: 124.02 bits (310), Expect = 2.745e-35
Identity = 62/166 (37.35%), Postives = 94/166 (56.63%), Query Frame = -3 
Query:   55 MNSVIGCVFLALIHASFGCNDSRGCTDLEVCVSGNCSKNPLTTKCYQEYDKVMKNLLFGSFIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYFNINENSNCKCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTSVHIEKANELKC 552
            MN++I CV L L+ AS GC DS  C     C  G C+   L  K     +K+         IP C+++G+Y P+QC +++C C S DGK+++  F   E+S+CKC ++K+ +     +G+ F C +NG Y PIQC+ S C+CVD  G+++    SV I   + L C
Sbjct:    1 MNAIIICVCLFLVQASLGCEDSVNCKYPRFCKGGRCTTTCLENK---RKEKLRCRGRVDCDIPNCDSDGLYKPIQCQSDMCACYSSDGKRLTESFMPEESSDCKCAMNKFYFETLQILGLPFKCQKNGDYEPIQCVDSECFCVDENGRRVEKIESVEISHKDLLHC 163
[Close]
BLAST of SMED30017441 vs. Planmine SMEST
Match: SMESG000016977.1 (SMESG000016977.1)

HSP 1 Score: 121.324 bits (303), Expect = 3.272e-34
Identity = 69/172 (40.12%), Postives = 99/172 (57.56%), Query Frame = -3 
Query:   55 KIMNSVIGCVFLALIHASFG-CNDSRGCTDLEVCVSGNCSKNPLTTKCYQEYDKVMKNLLFGSFIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNY-FNINE--NSNCKCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTSVHIEKANELKC 558
            K + S+I  + L LI+  +G C DS  C +  +C+   CS NPL T+C+ +  K  K  L G+ IP C++NG + PVQC  + CYC   +G  I NY  +INE  N +CKC  ++  Y L   +G +F+C  NGSY  +QC GS C+C D  GK + G   V+I +   L+C
Sbjct:    3 KTILSLITIMNLLLINKVYGTCQDSSDCNNDLICIGNECSDNPLNTQCFNKLSKARKGGLLGAPIPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAGKPIVNIGQIQSLRC 174
[Close]
BLAST of SMED30017441 vs. Planmine SMEST
Match: SMESG000017141.1 (SMESG000017141.1)

HSP 1 Score: 120.553 bits (301), Expect = 4.897e-34
Identity = 62/166 (37.35%), Postives = 94/166 (56.63%), Query Frame = -3 
Query:   55 MNSVIGCVFLALIHASFGCNDSRGCTDLEVCVSGNCSKNPLTTKCYQEYDKVMKNLLFGSFIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYFNINENSNCKCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTTSVHIEKANELKC 552
            MN++I CV L L+ AS GC DS  C     C  G C+   L  K     +K+      G  IP C+++G+Y  +QCP ++C C S DGK+++  F   ++S+CKC ++K+L+     +G+ F C +NG Y PIQC+ S C+CVD  G ++    S+ I   + L C
Sbjct:    1 MNAIIICVCLFLVQASLGCEDSIDCKYPRFCQGGRCTTTCLENK---RKEKLRCGKRVGCPIPGCDSDGLYKSIQCPIHMCACYSGDGKRLTEPFIRGKSSDCKCAMNKFLFDKLQLLGLPFKCQKNGDYEPIQCVDSECFCVDENGLRVENMESIGISHKDLLHC 163
The following BLAST results are available for this feature:
BLAST of SMED30017441 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 1
Match NameE-valueIdentityDescription
TG1.578e-1133.01thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764][more]
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BLAST of SMED30017441 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30017441 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30017441 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
nid2a3.702e-1031.94nidogen 2a (osteonidogen) [Source:ZFIN;Acc:ZDB-GEN... [more]
nid2a6.771e-930.15nidogen 2a (osteonidogen) [Source:ZFIN;Acc:ZDB-GEN... [more]
nid2a1.047e-827.46nidogen 2a (osteonidogen) [Source:ZFIN;Acc:ZDB-GEN... [more]
nid2a2.141e-831.16nidogen 2a (osteonidogen) [Source:ZFIN;Acc:ZDB-GEN... [more]
nid2a6.829e-828.23nidogen 2a (osteonidogen) [Source:ZFIN;Acc:ZDB-GEN... [more]
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BLAST of SMED30017441 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
amd11.115e-830.77adenosylmethionine decarboxylase 1 [Source:Xenbase... [more]
smoc13.089e-729.45SPARC related modular calcium binding 1 [Source:NC... [more]
nid25.859e-725.17nidogen 2 [Source:NCBI gene;Acc:100036716][more]
nid27.680e-725.17nidogen 2 [Source:NCBI gene;Acc:100036716][more]
nid28.459e-724.42nidogen 2 [Source:NCBI gene;Acc:100036716][more]
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BLAST of SMED30017441 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Tg7.571e-1033.01thyroglobulin [Source:MGI Symbol;Acc:MGI:98733][more]
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BLAST of SMED30017441 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P01266|THYG_HUMAN7.576e-1133.01Thyroglobulin OS=Homo sapiens OX=9606 GN=TG PE=1 S... [more]
sp|P06882|THYG_RAT1.338e-1031.07Thyroglobulin OS=Rattus norvegicus OX=10116 GN=Tg ... [more]
sp|F1RRV3|THYG_PIG1.850e-1030.10Thyroglobulin OS=Sus scrofa OX=9823 GN=TG PE=1 SV=... [more]
sp|P01267|THYG_BOVIN3.656e-1030.10Thyroglobulin OS=Bos taurus OX=9913 GN=TG PE=1 SV=... [more]
sp|O08710|THYG_MOUSE5.296e-933.01Thyroglobulin OS=Mus musculus OX=10090 GN=Tg PE=1 ... [more]
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BLAST of SMED30017441 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A210PY594.244e-1942.73Thyroglobulin OS=Mizuhopecten yessoensis OX=6573 G... [more]
A0A2T7PUN33.163e-1833.85Uncharacterized protein OS=Pomacea canaliculata OX... [more]
A0A2T7PUS95.491e-1835.38Uncharacterized protein OS=Pomacea canaliculata OX... [more]
A0A210QMT82.014e-1739.64Thyroglobulin OS=Mizuhopecten yessoensis OX=6573 G... [more]
A0A194AKI33.958e-1538.94Uncharacterized protein OS=Pinctada fucata OX=5042... [more]
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BLAST of SMED30017441 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
nid2a1.042e-928.48nidogen 2a (osteonidogen) [Source:ZFIN;Acc:ZDB-GEN... [more]
tg4.929e-828.33thyroglobulin [Source:NCBI gene;Acc:103037495][more]
smoc23.187e-633.04SPARC related modular calcium binding 2 [Source:NC... [more]
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BLAST of SMED30017441 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
tg1.488e-832.32thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1][more]
ENSPMAT00000002848.14.558e-641.51pep scaffold:Pmarinus_7.0:GL483853:4960:10548:-1 g... [more]
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BLAST of SMED30017441 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30017441 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO403711.949e-928.57Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO403645.265e-830.33Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO403702.003e-732.11Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO403724.941e-729.31Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO403735.204e-730.63Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of SMED30017441 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 4
Match NameE-valueIdentityDescription
ENSORLT00000046650.13.607e-930.00pep primary_assembly:ASM223467v1:16:31876438:31883... [more]
nid2a4.795e-627.54nidogen 2 [Source:NCBI gene;Acc:101173773][more]
nid2a4.813e-626.24nidogen 2 [Source:NCBI gene;Acc:101173773][more]
smoc26.454e-625.35SPARC related modular calcium binding 2 [Source:NC... [more]
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BLAST of SMED30017441 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000017161.11.359e-11597.59SMESG000017161.1[more]
SMESG000017039.12.335e-3640.72SMESG000017039.1[more]
SMESG000017143.12.745e-3537.35SMESG000017143.1[more]
SMESG000016977.13.272e-3440.12SMESG000016977.1[more]
SMESG000017141.14.897e-3437.35SMESG000017141.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30017441 ID=SMED30017441|Name=SMED30017441|organism=Schmidtea mediterranea sexual|type=transcript|length=734bp
AAAAACGTAAGCAATTTATTTGAATAAATCACAAAAGTTTAATGGAAATC
CTCAACATTTAAGTTCGTTAGCCTTCTCAATGTGAACTGAGGTAGTTCCA
GGAATCTTTTTGCCTTGGGCATCAACACAATAGCATGAGGATCCCAAACA
TTGAATCGGCCTATAACTGCCATTCTCGTTGCAATTAAATATGATTCCGA
CCGCCATATTAAGTGAATACAAATATTTATCTAGCCCGCATTTGCAATTT
GAGTTTTCATTAATGTTGAAATAATTGGAAATTTTCTTCCCATCTGGCGA
GGAACAATAGCATATGTTAGTGGGACACTGAACGGGACAATAGATTCCAT
TGGTGTTACAACAAGGAATAAAAGAGCCAAATAATAAATTCTTCATAACC
TTATCATATTCCTGATAACATTTTGTCGTCAATGGATTCTTAGAACAATT
ACCTGAAACGCAGACTTCCAAGTCAGTACAACCTCTGGAATCGTTACAAC
CGAAGGAGGCATGGATCAACGCAAGGAAAACGCAACCAATTACTGAATTC
ATGATTTTAATATCCAAGTTGGAATTCCAGAAATTCCTTGTTATATTTAT
ACTCAAACGAATCCCACCTCGAACAAGGAAAATTTACATAAAATTTTGAT
ACATTTAAAGAAAAAGTTATTTATTTTGTTGGGTTTTGCCACATTTGATC
TTCACTTGAACAAAGCAAAGCCAAAACGTTTGTG
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protein sequence of SMED30017441-orf-1

>SMED30017441-orf-1 ID=SMED30017441-orf-1|Name=SMED30017441-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=167bp
MNSVIGCVFLALIHASFGCNDSRGCTDLEVCVSGNCSKNPLTTKCYQEYD
KVMKNLLFGSFIPCCNTNGIYCPVQCPTNICYCSSPDGKKISNYFNINEN
SNCKCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGSSCYCVDAQGKKI
PGTTSVHIEKANELKC*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000232copulatory apparatus
PLANA:0002089reproductive organ
Vocabulary: INTERPRO
TermDefinition
IPR036857Thyroglobulin_1_sf
IPR000716Thyroglobulin_1
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000716Thyroglobulin type-1SMARTSM00211TY_2coord: 121..166
e-value: 1.5E-8
score: 44.4
coord: 62..109
e-value: 2.0
score: 2.1
IPR000716Thyroglobulin type-1PFAMPF00086Thyroglobulin_1coord: 58..103
e-value: 6.2E-6
score: 25.8
coord: 121..155
e-value: 2.0E-11
score: 43.4
IPR000716Thyroglobulin type-1PROSITEPS51162THYROGLOBULIN_1_2coord: 42..91
score: 7.421
IPR000716Thyroglobulin type-1PROSITEPS51162THYROGLOBULIN_1_2coord: 100..166
score: 8.991
IPR000716Thyroglobulin type-1CDDcd00191TYcoord: 123..153
e-value: 2.78653E-10
score: 51.6957
IPR036857Thyroglobulin type-1 superfamilyGENE3DG3DSA:4.10.800.10coord: 42..106
e-value: 1.9E-8
score: 35.5
coord: 108..164
e-value: 2.3E-12
score: 48.1
IPR036857Thyroglobulin type-1 superfamilySUPERFAMILYSSF57610Thyroglobulin type-1 domaincoord: 123..158
IPR036857Thyroglobulin type-1 superfamilySUPERFAMILYSSF57610Thyroglobulin type-1 domaincoord: 24..105
NoneNo IPR availablePANTHERPTHR12352SECRETED MODULAR CALCIUM-BINDING PROTEINcoord: 123..156
coord: 31..103
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.838