X-linked retinitis pigmentosa GTPase regulator-like protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30017327 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 7
Homology
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Human
Match: HERC3 (HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:HGNC Symbol;Acc:HGNC:4876]) HSP 1 Score: 111.309 bits (277), Expect = 7.938e-24 Identity = 85/285 (29.82%), Postives = 130/285 (45.61%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGV-QTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKN 3852 +++++ G NH++ L E G +Y+ G N GQLG E NK + + + +D+ I +A G+ HS A+ + +F+WG G GQLG +D RLI N Q+ +++S G +H + L G + +G NS+GQLG+ + P V L + V H+ + S +F WG++ N Q L+ EK ES LL QK+ ISCG H ++LT V+ FG+ GQLG + D N Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREG-------NKPEQIGAL----------ADQHIIHVACGESHSLAL-------SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLN-----QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN-NAGQLGLSDEKDR------ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284 HSP 2 Score: 80.4925 bits (197), Expect = 2.397e-14 Identity = 73/298 (24.50%), Postives = 134/298 (44.97%), Query Frame = 1 Query: 3193 SDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGH---GDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL-VPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISI---------PESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNI--PVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGHSLIQEHIKNPVSDTLKPQLLIE 4038 SD + +A G HS ++ ++ V+T G GQLGH G+ +Q + I ++ G HS+ L+++G ++ +G S GQLG+ T + S+ VP L+ +L ++ V +H + A + FTWG + SHG++ + P+ + + L +AQ++ G H+ L+ V+ +G N GQLGL + KD ++ V + + ++S + T ++KS F G CG + + ++D + P+ ++E Sbjct: 32 SDRSVKEVACGGNHSVFLL-------EDGEVYTCGLNTKGQLGHEREGNKPEQI-----------GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG------------KNSHGQLGLGKEFPSQASPQRVRS---LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS-GGVFTFGAGSCG-----QLGHDSMNDEVNPRRVLE 290 HSP 3 Score: 62.003 bits (149), Expect = 1.027e-8 Identity = 45/177 (25.42%), Postives = 87/177 (49.15%), Query Frame = 1 Query: 2974 PKSIESGKEI-IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSV-ILTNKGFVYCFGNNSYGQLGV 3498 P+ + S + I + Q++ G H+ L+ SG+++ G N GQLG+ + +++ +++L + + I+ G+ H+ + T++ VFT+G G GQLGH ++D+ V+ R + + S Q ++ G H++ + + G +Y FG + GQLG Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP---------------CHVKLLRTQKVVYISCGEEHTAVL-------TKSGGVFTFGAGSCGQLGHDSMNDE-VNPRRVLELMGSEVTQ-----IACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329 HSP 4 Score: 58.5362 bits (140), Expect = 1.088e-7 Identity = 59/229 (25.76%), Postives = 96/229 (41.92%), Query Frame = 1 Query: 2971 LPKSIES-GKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQ--------FVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLV-DRLPPAVIHVDTKYFHTVC-CTASNEIFTWG 3624 +P+ I+ ++ I Q+S G H L L G ++ G N GQLG+ Q S + + L I + +AAG HS A+ +S + VF WG GQLG D D+ ++++++ +S G H+ +LT G V+ FG S GQLG ++ + P V + + V + HT+ +S I+ +G Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIP-------------LAQVAAGGAHSFALSLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY--------------ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Human
Match: HERC3 (HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:HGNC Symbol;Acc:HGNC:4876]) HSP 1 Score: 111.309 bits (277), Expect = 7.938e-24 Identity = 85/285 (29.82%), Postives = 130/285 (45.61%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGV-QTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKN 3852 +++++ G NH++ L E G +Y+ G N GQLG E NK + + + +D+ I +A G+ HS A+ + +F+WG G GQLG +D RLI N Q+ +++S G +H + L G + +G NS+GQLG+ + P V L + V H+ + S +F WG++ N Q L+ EK ES LL QK+ ISCG H ++LT V+ FG+ GQLG + D N Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREG-------NKPEQIGAL----------ADQHIIHVACGESHSLAL-------SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLN-----QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN-NAGQLGLSDEKDR------ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284 HSP 2 Score: 80.4925 bits (197), Expect = 2.397e-14 Identity = 73/298 (24.50%), Postives = 134/298 (44.97%), Query Frame = 1 Query: 3193 SDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGH---GDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL-VPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISI---------PESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNI--PVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGHSLIQEHIKNPVSDTLKPQLLIE 4038 SD + +A G HS ++ ++ V+T G GQLGH G+ +Q + I ++ G HS+ L+++G ++ +G S GQLG+ T + S+ VP L+ +L ++ V +H + A + FTWG + SHG++ + P+ + + L +AQ++ G H+ L+ V+ +G N GQLGL + KD ++ V + + ++S + T ++KS F G CG + + ++D + P+ ++E Sbjct: 32 SDRSVKEVACGGNHSVFLL-------EDGEVYTCGLNTKGQLGHEREGNKPEQI-----------GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG------------KNSHGQLGLGKEFPSQASPQRVRS---LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS-GGVFTFGAGSCG-----QLGHDSMNDEVNPRRVLE 290 HSP 3 Score: 62.003 bits (149), Expect = 1.027e-8 Identity = 45/177 (25.42%), Postives = 87/177 (49.15%), Query Frame = 1 Query: 2974 PKSIESGKEI-IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSV-ILTNKGFVYCFGNNSYGQLGV 3498 P+ + S + I + Q++ G H+ L+ SG+++ G N GQLG+ + +++ +++L + + I+ G+ H+ + T++ VFT+G G GQLGH ++D+ V+ R + + S Q ++ G H++ + + G +Y FG + GQLG Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP---------------CHVKLLRTQKVVYISCGEEHTAVL-------TKSGGVFTFGAGSCGQLGHDSMNDE-VNPRRVLELMGSEVTQ-----IACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329 HSP 4 Score: 58.5362 bits (140), Expect = 1.088e-7 Identity = 59/229 (25.76%), Postives = 96/229 (41.92%), Query Frame = 1 Query: 2971 LPKSIES-GKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQ--------FVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLV-DRLPPAVIHVDTKYFHTVC-CTASNEIFTWG 3624 +P+ I+ ++ I Q+S G H L L G ++ G N GQLG+ Q S + + L I + +AAG HS A+ +S + VF WG GQLG D D+ ++++++ +S G H+ +LT G V+ FG S GQLG ++ + P V + + V + HT+ +S I+ +G Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIP-------------LAQVAAGGAHSFALSLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY--------------ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Human
Match: AC098582.1 (HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:NCBI gene;Acc:8916]) HSP 1 Score: 111.309 bits (277), Expect = 9.110e-24 Identity = 85/285 (29.82%), Postives = 130/285 (45.61%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGV-QTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKN 3852 +++++ G NH++ L E G +Y+ G N GQLG E NK + + + +D+ I +A G+ HS A+ + +F+WG G GQLG +D RLI N Q+ +++S G +H + L G + +G NS+GQLG+ + P V L + V H+ + S +F WG++ N Q L+ EK ES LL QK+ ISCG H ++LT V+ FG+ GQLG + D N Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREG-------NKPEQIGAL----------ADQHIIHVACGESHSLAL-------SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLN-----QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN-NAGQLGLSDEKDR------ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284 HSP 2 Score: 80.4925 bits (197), Expect = 2.621e-14 Identity = 73/298 (24.50%), Postives = 134/298 (44.97%), Query Frame = 1 Query: 3193 SDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGH---GDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL-VPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISI---------PESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNI--PVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGHSLIQEHIKNPVSDTLKPQLLIE 4038 SD + +A G HS ++ ++ V+T G GQLGH G+ +Q + I ++ G HS+ L+++G ++ +G S GQLG+ T + S+ VP L+ +L ++ V +H + A + FTWG + SHG++ + P+ + + L +AQ++ G H+ L+ V+ +G N GQLGL + KD ++ V + + ++S + T ++KS F G CG + + ++D + P+ ++E Sbjct: 32 SDRSVKEVACGGNHSVFLL-------EDGEVYTCGLNTKGQLGHEREGNKPEQI-----------GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG------------KNSHGQLGLGKEFPSQASPQRVRS---LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS-GGVFTFGAGSCG-----QLGHDSMNDEVNPRRVLE 290 HSP 3 Score: 62.003 bits (149), Expect = 1.125e-8 Identity = 45/177 (25.42%), Postives = 87/177 (49.15%), Query Frame = 1 Query: 2974 PKSIESGKEI-IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSV-ILTNKGFVYCFGNNSYGQLGV 3498 P+ + S + I + Q++ G H+ L+ SG+++ G N GQLG+ + +++ +++L + + I+ G+ H+ + T++ VFT+G G GQLGH ++D+ V+ R + + S Q ++ G H++ + + G +Y FG + GQLG Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP---------------CHVKLLRTQKVVYISCGEEHTAVL-------TKSGGVFTFGAGSCGQLGHDSMNDE-VNPRRVLELMGSEVTQ-----IACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329 HSP 4 Score: 58.5362 bits (140), Expect = 1.222e-7 Identity = 60/229 (26.20%), Postives = 97/229 (42.36%), Query Frame = 1 Query: 2971 LPKSIES-GKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQ--------FVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLV-DRLPPAVIHVDTKYFHTVC-CTASNEIFTWG 3624 +P+ I+ ++ I Q+S G H L L G ++ G N GQLG+ Q S + + L I P+ +AAG HS A+ +S + VF WG GQLG D D+ ++++++ +S G H+ +LT G V+ FG S GQLG ++ + P V + + V + HT+ +S I+ +G Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGI-PLA------------QVAAGGAHSFALSLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY--------------ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Human
Match: RCBTB2 (RCC1 and BTB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:1914]) HSP 1 Score: 107.457 bits (267), Expect = 4.725e-23 Identity = 97/346 (28.03%), Postives = 158/346 (45.66%), Query Frame = 1 Query: 2998 EIIRQISL---GKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTA---SNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTK-------LFVWGRC-GHSLIQEHI 3993 ++IRQ + N L T + ++ GTN CG LG+ S I P ++ LN + IA Y SG +V T VFTWG + QLG+G + V + + +N + IE++ G +HS++LT+ G V+ +G N+ GQ+G + +P V + V T +CC A + E++ WG + N Q L + G P + L ++ +++CG H +LTD+ VY +G+N +GQLG GN+ + + P P+ V D I IA S +++ +++WG+C G S+I H+ Sbjct: 48 QLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL-------------GDVQSTIEPRRLD-SLNGKK----IACLSYGSGPHIVLA---TTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-----KQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNGN-GQLGLGNS---GNQPTPCRVAA---LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ------SYPTPVT-VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHL 352
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Human
Match: RCBTB2 (RCC1 and BTB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:1914]) HSP 1 Score: 106.686 bits (265), Expect = 7.065e-23 Identity = 97/348 (27.87%), Postives = 159/348 (45.69%), Query Frame = 1 Query: 2998 EIIRQISL---GKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTA---SNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTK-------LFVWGRC-GHSLIQEHIKN 3999 ++IRQ + N L T + ++ GTN CG LG+ S I P ++ LN + IA Y SG +V T VFTWG + QLG+G + V + + +N + IE++ G +HS++LT+ G V+ +G N+ GQ+G + +P V + V T +CC A + E++ WG + N Q L + G P + L ++ +++CG H +LTD+ VY +G+N +GQLG GN+ + + P P+ V D I IA S +++ +++WG+C G S+I H+ + Sbjct: 19 QLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL-------------GDVQSTIEPRRLD-SLNGKK----IACLSYGSGPHIVLA---TTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-----KQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNGN-GQLGLGNS---GNQPTPCRVAA---LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ------SYPTPVT-VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTH 325
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Celegans
Match: glo-4 (X-linked retinitis pigmentosa GTPase regulator homolog [Source:UniProtKB/Swiss-Prot;Acc:Q5DX34]) HSP 1 Score: 112.079 bits (279), Expect = 2.548e-24 Identity = 96/369 (26.02%), Postives = 161/369 (43.63%), Query Frame = 1 Query: 2971 LPKSIESGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSD-ECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDD--QFVSKR---LIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQT-LQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQ------------------------NSLNHEKSHGEISIPESIYTGDL-------LSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGR 3963 LP+ +E R I+ G H L+L+ SG L + G N GQ G+ H + ++ +H +++ D I IA G +HS I S ++T+GWGV GQLGHG ++ Q V R LI +++ G H+V+LT+ G V G+ SYGQ+GV ++K + P V + T Y+H++C T N +F WG +P + S N +++P I DL + I ++CG H++++T + +Y +G + QLG GN+ + +V P +V+ G ++ +++ + +F WG+ Sbjct: 761 LPRVLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGV-GHSFR----------IANLH------QVDGDWPAIEKIACGQFHSAFICSDGS-------LWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVT----------QIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGS-VFAWGK 1094 HSP 2 Score: 54.299 bits (129), Expect = 1.084e-6 Identity = 34/103 (33.01%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 3196 DECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQT 3504 D I S+A G HS I T ++TWG G+ QLGHG+ +++ + +F+ N G ++ + +S+G H++ T+ G V+ +G N +GQ GV T Sbjct: 1015 DGNIVSVACGLSHSALI-------TSEGTLYTWGKGLDYQLGHGNKNERMEPHQ-VFEPN----GAKW-VNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLT 1104
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Celegans
Match: herc-1 (HECT and RCC domain E3 ubiquitin ligase [Source:UniProtKB/TrEMBL;Acc:W6RY72]) HSP 1 Score: 80.8777 bits (198), Expect = 6.628e-15 Identity = 79/336 (23.51%), Postives = 144/336 (42.86%), Query Frame = 1 Query: 2959 RILLLPKSIESGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFV---SKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPA-VIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPE-----SIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLG---NRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKS 3930 RI+ P ++ + ++ G+ H + LT+ G ++S G+N GQLG + + SF I+P + S I I+AG H+ ++ T + VF WG HGQLG ++ +F + R + + N+ ++++ G H + L G V+ +G + G + + + P V++L ++ V H + +AS +FTWG + + GE+ I + S+ + + + +CG H +LT + FGS+ GQ G G ++ N V I + +++ TIA+ K Sbjct: 30 RIIGAPNDMDG--TAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRT--EGSFS--------IYP----VSWTSSAKIIQISAGRSHTVSV-------TDDGRVFAWGSNEHGQLG---MESKFTWQGTPRRVQEINDI-------VQVASGSNHCIALDEGGRVFVWGEQADG----RCIHR---PEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWG------------QNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAICKG 313 HSP 2 Score: 53.9138 bits (128), Expect = 1.131e-6 Identity = 53/183 (28.96%), Postives = 79/183 (43.17%), Query Frame = 1 Query: 3469 GNNSYGQLGVQTLQKSL-VPNLVDRLP-----PAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNR----KDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVW-----GRCGH 3972 G+ GQLGV+ + ++ VP + P AV V HTV T ++ W + N+ ++ G SI Y S+ KI QIS G H +TD V+ +GSN GQLG+ ++ + + E+N D V G ++ E ++FVW GRC H Sbjct: 9 GHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKM--WSVGSNMDGQLGRGSRTEGSFSI----YPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEIN-----DIVQVASGSNHCIALDEGG-RVFVWGEQADGRCIH 179
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Celegans
Match: herc-1 (HECT and RCC domain E3 ubiquitin ligase [Source:UniProtKB/TrEMBL;Acc:W6RY72]) HSP 1 Score: 80.8777 bits (198), Expect = 6.628e-15 Identity = 79/336 (23.51%), Postives = 144/336 (42.86%), Query Frame = 1 Query: 2959 RILLLPKSIESGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFV---SKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPA-VIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPE-----SIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLG---NRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKS 3930 RI+ P ++ + ++ G+ H + LT+ G ++S G+N GQLG + + SF I+P + S I I+AG H+ ++ T + VF WG HGQLG ++ +F + R + + N+ ++++ G H + L G V+ +G + G + + + P V++L ++ V H + +AS +FTWG + + GE+ I + S+ + + + +CG H +LT + FGS+ GQ G G ++ N V I + +++ TIA+ K Sbjct: 30 RIIGAPNDMDG--TAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRT--EGSFS--------IYP----VSWTSSAKIIQISAGRSHTVSV-------TDDGRVFAWGSNEHGQLG---MESKFTWQGTPRRVQEINDI-------VQVASGSNHCIALDEGGRVFVWGEQADG----RCIHR---PEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWG------------QNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAICKG 313 HSP 2 Score: 53.9138 bits (128), Expect = 1.131e-6 Identity = 53/183 (28.96%), Postives = 79/183 (43.17%), Query Frame = 1 Query: 3469 GNNSYGQLGVQTLQKSL-VPNLVDRLP-----PAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNR----KDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVW-----GRCGH 3972 G+ GQLGV+ + ++ VP + P AV V HTV T ++ W + N+ ++ G SI Y S+ KI QIS G H +TD V+ +GSN GQLG+ ++ + + E+N D V G ++ E ++FVW GRC H Sbjct: 9 GHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKM--WSVGSNMDGQLGRGSRTEGSFSI----YPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEIN-----DIVQVASGSNHCIALDEGG-RVFVWGEQADGRCIH 179
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Celegans
Match: nekl-1 (NEK (NEver in mitosis Kinase) Like [Source:UniProtKB/TrEMBL;Acc:A0A061AD48]) HSP 1 Score: 56.225 bits (134), Expect = 2.332e-7 Identity = 71/264 (26.89%), Postives = 108/264 (40.91%), Query Frame = 1 Query: 3406 ELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHV--DTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRK-----------DNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGHSLIQEHIKNPVSDTLKPQLLIEY-QHVVDNHLAWKNCFGIDTVVNGIPKIISKKQLMIIFLN 4155 ++++ H+++LTN ++ FG+NS GQLG K LV+ L I YF +CC + T+G N L K + + P + + L + I I CG H + + +GSN +GQLGL + NK +V + SDDG IAM S KL + R G + K P KP +L + + VVD F + + +G+ I+ Q+MI N Sbjct: 433 QVALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSKMENGRLVESLKGRDIQSVGVGNYFSVICCDRGT-LLTFGTAKN-----LGLGKDAKDSAKPMLL---EQLLRENIKDIYCGHDHVVAVLESGECLGWGSNQYGQLGLPTLEHFFAPTKIPMPSNKKIVYGKAGKDATMLLSDDGSLIAMG-SNKHNKLNLTQRVG--FFTKEKKTPNDYVNKPTILQGFPERVVD--------FSVGSYHSGV--ILESGQVMIFGRN 674
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Celegans
Match: nekl-1 (NEK (NEver in mitosis Kinase) Like [Source:UniProtKB/TrEMBL;Acc:A0A061AD48]) HSP 1 Score: 56.225 bits (134), Expect = 2.590e-7 Identity = 71/264 (26.89%), Postives = 108/264 (40.91%), Query Frame = 1 Query: 3406 ELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHV--DTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRK-----------DNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGHSLIQEHIKNPVSDTLKPQLLIEY-QHVVDNHLAWKNCFGIDTVVNGIPKIISKKQLMIIFLN 4155 ++++ H+++LTN ++ FG+NS GQLG K LV+ L I YF +CC + T+G N L K + + P + + L + I I CG H + + +GSN +GQLGL + NK +V + SDDG IAM S KL + R G + K P KP +L + + VVD F + + +G+ I+ Q+MI N Sbjct: 471 QVALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSKMENGRLVESLKGRDIQSVGVGNYFSVICCDRGT-LLTFGTAKN-----LGLGKDAKDSAKPMLL---EQLLRENIKDIYCGHDHVVAVLESGECLGWGSNQYGQLGLPTLEHFFAPTKIPMPSNKKIVYGKAGKDATMLLSDDGSLIAMG-SNKHNKLNLTQRVG--FFTKEKKTPNDYVNKPTILQGFPERVVD--------FSVGSYHSGV--ILESGQVMIFGRN 712
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Fly
Match: HERC2 (gene:FBgn0031107 transcript:FBtr0301344) HSP 1 Score: 91.2781 bits (225), Expect = 9.418e-18 Identity = 89/317 (28.08%), Postives = 132/317 (41.64%), Query Frame = 1 Query: 3013 ISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRL--IFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRK--DNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKL 3948 ++ G H L LT G +Y+ G E G+LG N +S P L+ LN + IA G HS AI T + HV TWG G +G+LGHGD +DQ K + + + + I G ++ +T+ V+ +G+ YG+LG +P ++ L V+ V+ +V T S ++TWG H HG + L +KI I+ G+ H +D VY +G N GQLG G LV I V+ T+A+S S+ S +L Sbjct: 4141 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR-------------MSYDRPKLVE-HLNG-MSVADIACGSAHSAAI-------TASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGY------RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWG-------KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTSQLSERL 4422 HSP 2 Score: 85.8853 bits (211), Expect = 4.064e-16 Identity = 76/291 (26.12%), Postives = 133/291 (45.70%), Query Frame = 1 Query: 3001 IIRQISL--GKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGC--FHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHG---EISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNK 3849 +++++++ G HAL LT G ++S G E G+LG N ++ P L+ E + I +A G HS AI + ++TWG G +G+LGHGD Q K + + +G+ ++++ G ++ LT G V+ +G+ +G+LG + S P+ ++RL V+ ++ ++ T + E++TWG + HG + P+ I L +++ ++ G H +TD VY +G N GQ G GN NK Sbjct: 3072 VVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRT-------------TLDKPRLV--EALRAKKIRDVACGSSHSAAI-------SSQGELYTWGLGEYGRLGHGDNTTQLKPKLV-----TALAGRRV-VQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWG-------KGDYYRLGHGGDQHVRKPQPIGG---LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNK 3324 HSP 3 Score: 73.1738 bits (178), Expect = 2.849e-12 Identity = 58/212 (27.36%), Postives = 97/212 (45.75%), Query Frame = 1 Query: 3202 CIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQ-------FVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNH---EKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSN 3807 C+ S+ G +S AI T ++ TWG G + +LGHG+ DD+ +S ++ D + L G HS+ LT++G V+ +G+ YG+LG SL P LV+ L P V V +V ++ +++TWG L H E+S S+P + + L +++I ++ H L+ V+ +G N Sbjct: 669 CVQSVYCGCSYSAAI-------TCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVD-----------VALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL-PRVQRVFAGSQFSVALSSEGQLYTWGK-----ATCLGHQLVERSVQGCSVPRLVSS---LQHKRIVDVAVSVAHCLALSSSGEVFGWGRN 853 HSP 4 Score: 54.299 bits (129), Expect = 1.384e-6 Identity = 68/292 (23.29%), Postives = 123/292 (42.12%), Query Frame = 1 Query: 3013 ISLGKNHALILTESGSLY---SAGTNECGQLGIEN--HVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSH--------VFTWGWGVHGQLG--HGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIH---VDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGN 3834 + G + L++ + + Y +C GI+ H +K FV + Q + H +L N + + E + G +GA VSTSH + V WG QLG G SK + F+ + S PI ++ G I++ G VY G + G+LG+ +P+ + L V+ V + H + T ++F+WG + + HG + + + L +KI ++CG+ H++ ++ + +Y +G +G+LG G+ Sbjct: 2890 VPAGASRVLLMQQVPTYYPWVEVVVKQCQNNGIQCKIHGIK---FVGRRQQPDLQH-ILANAQFLASEYSAGVGPGST-AGAGAVSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLGGLKG-------SKVKVPTFSQTISRLR-PIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWG-------EGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGD 3161
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Fly
Match: Herc4 (gene:FBgn0035207 transcript:FBtr0310555) HSP 1 Score: 86.6557 bits (213), Expect = 1.386e-16 Identity = 99/366 (27.05%), Postives = 156/366 (42.62%), Query Frame = 1 Query: 2932 LGFIKEKSNRILLLPKSIE-SGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHG---------DIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL------PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLG---NRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGH 3972 LG I+++ +L P I + ++Q++ G H L LT +G +Y+ G+N+ QLG + K +S P L+ EL D I I G HS A+ + V +WG GQLGH + Q V+K + ++++ G HS+ LT+ G +Y +G+N YGQLGV + N RL P A I H+ + S +F WG + N Q LN E + S P + T L + ++CG + LT++ V+ G+ +GQLG G N + ++E+ + I V+ + T+A+ S F G G Sbjct: 20 LGGIEDEQ---ILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLG--------HDLPTKRPRMS---PFLLIPELQ-DYVIIQICCGSRHSLAL-------SDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTV--------------VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGN--HSFLISKSGAVFGWGRN-NCGQLGLNDETNR---SYPTQLKT---LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMEL-MGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQ 339 HSP 2 Score: 82.0333 bits (201), Expect = 3.775e-15 Identity = 66/247 (26.72%), Postives = 111/247 (44.94%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKS-------LVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIP--------VPIDFVSSDDGITIAMSKSENSTKLFVWGR--CGH 3972 ++ WG HGQLG G I+D+ + + + Q+ ++ G H++ LT G VY G+N Y QLG K L+P L D + +I + H++ + ++ +WG + L H + +P+ + L + + QI+CG H+ LT +Y +GSN++GQLG+ + D L N P +P+ ++ + +SK S +F WGR CG Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQ----VACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYV---IIQICCGSRHSLALSDWGQVLSWGDNDC---GQLGHATDKEIVQLPKVVRQ---LVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPND---LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK---SGAVFGWGRNNCGQ 234 HSP 3 Score: 69.3218 bits (168), Expect = 2.786e-11 Identity = 78/312 (25.00%), Postives = 127/312 (40.71%), Query Frame = 1 Query: 2944 KEKSNRILLLPKSIESGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSM-----------GCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHA-SILTDKQFVYCFGSNVWGQLGLGNRK 3840 + + + LL+P E +I QI G H+L L++ G + S G N+CGQLG H + Q ++ ++ + + IA G+ HS A+ T +++WG ++GQLG +D + +P+ L+ G HS +++ G V+ +G N+ GQLG+ P + L V V +V T +FT G L H S E+ +P + L I Q++CG H +++ + VY FG GQLG + K Sbjct: 80 RPRMSPFLLIP---ELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLG---HATDKEIV----QLPKVVRQLVT-------KTVVQIACGNNHSLAL-------TSCGELYSWGSNIYGQLGVNSPNDL--------------THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA---YGQLGHGFSSNEM-LPRMVME---LMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 346 HSP 4 Score: 68.5514 bits (166), Expect = 4.829e-11 Identity = 49/178 (27.53%), Postives = 87/178 (48.88%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILT-NKGFVYCFGNNSYGQLGVQTLQKSLVPNLV 3534 + I+ G NH+ ++++SG+++ G N CGQLG+ + S+ + + L + + +A GD S + T VFT G G +GQLGHG ++ + R++ + S Q ++ G H++ L ++G VY FG S GQLG ++ + ++P +V Sbjct: 205 LAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDET--NRSYPTQLKTLRTLG-------------VRFVACGDEFSVFL-------TNEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTITQ-----VACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 354
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Fly
Match: Herc4 (gene:FBgn0035207 transcript:FBtr0072670) HSP 1 Score: 85.8853 bits (211), Expect = 2.772e-16 Identity = 99/366 (27.05%), Postives = 155/366 (42.35%), Query Frame = 1 Query: 2932 LGFIKEKSNRILLLPKSIE-SGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHG---------DIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL------PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLG---NRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGH 3972 LG I+++ +L P I + ++Q++ G H L LT +G +Y+ G+N+ QLG + L P+LI EL D I I G HS A+ + V +WG GQLGH + Q V+K + ++++ G HS+ LT+ G +Y +G+N YGQLGV + N RL P A I H+ + S +F WG + N Q LN E + S P + T L + ++CG + LT++ V+ G+ +GQLG G N + ++E+ + I V+ + T+A+ S F G G Sbjct: 20 LGGIEDEQ---ILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHD---------------LPTKRPLLIP-ELQ-DYVIIQICCGSRHSLAL-------SDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTV--------------VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGN--HSFLISKSGAVFGWGRN-NCGQLGLNDETNR---SYPTQLKT---LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMEL-MGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQ 334 HSP 2 Score: 85.8853 bits (211), Expect = 3.017e-16 Identity = 66/242 (27.27%), Postives = 113/242 (46.69%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLG--VQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIP--------VPIDFVSSDDGITIAMSKSENSTKLFVWGR--CGH 3972 ++ WG HGQLG G I+D+ + + + Q+ ++ G H++ LT G VY G+N Y QLG + T + L+P L D + +I + H++ + ++ +WG + L H + +P+ + L + + QI+CG H+ LT +Y +GSN++GQLG+ + D L N P +P+ ++ + +SK S +F WGR CG Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQ----VACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQDYV---IIQICCGSRHSLALSDWGQVLSWGDNDC---GQLGHATDKEIVQLPKVVRQ---LVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPND---LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK---SGAVFGWGRNNCGQ 229 HSP 3 Score: 70.4774 bits (171), Expect = 1.288e-11 Identity = 79/309 (25.57%), Postives = 126/309 (40.78%), Query Frame = 1 Query: 2953 SNRILLLPKSIESGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSM-----------GCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHA-SILTDKQFVYCFGSNVWGQLGLGNRK 3840 + R LL+P E +I QI G H+L L++ G + S G N+CGQLG H + Q ++ ++ + + IA G+ HS A+ T +++WG ++GQLG +D + +P+ L+ G HS +++ G V+ +G N+ GQLG+ P + L V V +V T +FT G L H S E+ +P + L I Q++CG H +++ + VY FG GQLG + K Sbjct: 78 TKRPLLIP---ELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLG---HATDKEIV----QLPKVVRQLVT-------KTVVQIACGNNHSLAL-------TSCGELYSWGSNIYGQLGVNSPNDL--------------THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA---YGQLGHGFSSNEM-LPRMVME---LMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341 HSP 4 Score: 68.5514 bits (166), Expect = 5.160e-11 Identity = 49/178 (27.53%), Postives = 87/178 (48.88%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILT-NKGFVYCFGNNSYGQLGVQTLQKSLVPNLV 3534 + I+ G NH+ ++++SG+++ G N CGQLG+ + S+ + + L + + +A GD S + T VFT G G +GQLGHG ++ + R++ + S Q ++ G H++ L ++G VY FG S GQLG ++ + ++P +V Sbjct: 200 LAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDET--NRSYPTQLKTLRTLG-------------VRFVACGDEFSVFL-------TNEGGVFTCGAGAYGQLGHGFSSNEMLP-RMVMELMGSTITQ-----VACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Fly
Match: Herc4 (gene:FBgn0035207 transcript:FBtr0072671) HSP 1 Score: 85.8853 bits (211), Expect = 2.772e-16 Identity = 99/366 (27.05%), Postives = 155/366 (42.35%), Query Frame = 1 Query: 2932 LGFIKEKSNRILLLPKSIE-SGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHG---------DIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL------PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLG---NRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGH 3972 LG I+++ +L P I + ++Q++ G H L LT +G +Y+ G+N+ QLG + L P+LI EL D I I G HS A+ + V +WG GQLGH + Q V+K + ++++ G HS+ LT+ G +Y +G+N YGQLGV + N RL P A I H+ + S +F WG + N Q LN E + S P + T L + ++CG + LT++ V+ G+ +GQLG G N + ++E+ + I V+ + T+A+ S F G G Sbjct: 20 LGGIEDEQ---ILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHD---------------LPTKRPLLIP-ELQ-DYVIIQICCGSRHSLAL-------SDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTV--------------VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGN--HSFLISKSGAVFGWGRN-NCGQLGLNDETNR---SYPTQLKT---LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMEL-MGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQ 334 HSP 2 Score: 85.8853 bits (211), Expect = 3.017e-16 Identity = 66/242 (27.27%), Postives = 113/242 (46.69%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLG--VQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIP--------VPIDFVSSDDGITIAMSKSENSTKLFVWGR--CGH 3972 ++ WG HGQLG G I+D+ + + + Q+ ++ G H++ LT G VY G+N Y QLG + T + L+P L D + +I + H++ + ++ +WG + L H + +P+ + L + + QI+CG H+ LT +Y +GSN++GQLG+ + D L N P +P+ ++ + +SK S +F WGR CG Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQ----VACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQDYV---IIQICCGSRHSLALSDWGQVLSWGDNDC---GQLGHATDKEIVQLPKVVRQ---LVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPND---LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK---SGAVFGWGRNNCGQ 229 HSP 3 Score: 70.4774 bits (171), Expect = 1.288e-11 Identity = 79/309 (25.57%), Postives = 126/309 (40.78%), Query Frame = 1 Query: 2953 SNRILLLPKSIESGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSM-----------GCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHA-SILTDKQFVYCFGSNVWGQLGLGNRK 3840 + R LL+P E +I QI G H+L L++ G + S G N+CGQLG H + Q ++ ++ + + IA G+ HS A+ T +++WG ++GQLG +D + +P+ L+ G HS +++ G V+ +G N+ GQLG+ P + L V V +V T +FT G L H S E+ +P + L I Q++CG H +++ + VY FG GQLG + K Sbjct: 78 TKRPLLIP---ELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLG---HATDKEIV----QLPKVVRQLVT-------KTVVQIACGNNHSLAL-------TSCGELYSWGSNIYGQLGVNSPNDL--------------THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA---YGQLGHGFSSNEM-LPRMVME---LMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341 HSP 4 Score: 68.5514 bits (166), Expect = 5.160e-11 Identity = 49/178 (27.53%), Postives = 87/178 (48.88%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILT-NKGFVYCFGNNSYGQLGVQTLQKSLVPNLV 3534 + I+ G NH+ ++++SG+++ G N CGQLG+ + S+ + + L + + +A GD S + T VFT G G +GQLGHG ++ + R++ + S Q ++ G H++ L ++G VY FG S GQLG ++ + ++P +V Sbjct: 200 LAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDET--NRSYPTQLKTLRTLG-------------VRFVACGDEFSVFL-------TNEGGVFTCGAGAYGQLGHGFSSNEMLP-RMVMELMGSTITQ-----VACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Fly
Match: ca (gene:FBgn0000247 transcript:FBtr0346613) HSP 1 Score: 77.7962 bits (190), Expect = 8.317e-14 Identity = 62/229 (27.07%), Postives = 101/229 (44.10%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDD----QFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNK-----------GFVYCFGNNSYGQLGVQTLQ----KSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHP 3633 + I G+ H LILT +G LYS G N QLGI H+ + PML+ + I + AG YH+ A+ + ++ WGWG++GQLG G ++ Q VS F F +++S+G H+++L ++ FG+N +GQLG K+ +P ++ ++ + TK+F + + +FTWG P Sbjct: 1175 VHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQM------------ALQPMLVTALDGMN--ITMLEAGQYHNAAVA--------DGKLYMWGWGIYGQLGQGSCENIATPQLVS---FFKFKKI-------LQISLGHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLPVRLEVGDCSLRLIHTKFFTNLAVDEQDRLFTWGSSP 1370 HSP 2 Score: 58.151 bits (139), Expect = 8.354e-8 Identity = 56/204 (27.45%), Postives = 90/204 (44.12%), Query Frame = 1 Query: 3427 HSVILTNKGFVYCFGNNSYGQLGV-QTLQKSLVPNLVDRLPPAVIHV--DTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDK-----------QFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSK------SENSTKLFVWGRCGHSL 3978 H++ILTN G +Y GNN+ QLG+ + +Q +L P LV L I + +Y + ++ WGI+ + Q S + I+ P+ + +KI QIS G H +L ++ FGSN +GQLG GN + N+PV ++ D + + +K + +LF WG +L Sbjct: 1184 HTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQYHNAAVADGKLYMWGWGIYGQLGQGSCEN------IATPQLV---SFFKFKKILQISLGHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGD--TKTNLPVRLEV--GDCSLRLIHTKFFTNLAVDEQDRLFTWGSSPQAL 1373
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Zebrafish
Match: herc3 (HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:ZFIN;Acc:ZDB-GENE-090313-139]) HSP 1 Score: 98.9821 bits (245), Expect = 3.722e-20 Identity = 92/343 (26.82%), Postives = 141/343 (41.11%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLI---------------------------FDFNNSGSGQ--------------------EFPI-ELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHA-SILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPI 3882 +++++ G H+L L GS+Y+ G+N CGQLG + K S P L+ L++ + I ++ G HS A+ + VF WG G GQLG G ++ RLI F + + SGQ P+ ++S G HS L+ G V+ +G NS GQLG+ Q VP + L V+++ HT T +FT+G N + L H+ + E +P + L +++QI+CG H + + +Y FG N GQLG G R K+ PVP+ Sbjct: 36 LKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHD----KGGS-----------RPELVG-ALDAQK-ISGVSCGQAHSLAV-------NEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFG---NGSKGQLGHDSTRNE-PLPRRVME---LMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKS------PVPV 341 HSP 2 Score: 64.6994 bits (156), Expect = 9.483e-10 Identity = 58/210 (27.62%), Postives = 99/210 (47.14%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSV-ILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIH 3630 + QIS G +H+ L+ SG+++ G N GQLG+ + +Q+ V P I L S + ++ I+ G+ H+ A+ T+ +FT+G G GQLGH ++ + +R++ S +++ G H++ + + G +Y FG N+ GQLG + P V + P I Y T CT + +I + G H Sbjct: 192 LTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLND---EQDRAV----------PCHIKF-LRSQKVVY-ISCGEEHTAAL-------TKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVS------QIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPLCI--GNAYTRTEHCTIA-KIHSGGDH 370 HSP 3 Score: 62.003 bits (149), Expect = 7.473e-9 Identity = 69/282 (24.47%), Postives = 114/282 (40.43%), Query Frame = 1 Query: 3202 CIF------SIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGH----------GDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL-VPNLVDRLPPAVI-HVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISI----PESIYTGDL--LSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENST-----KLFVWG 3960 C+F +A G+ HS ++ + V+T G GQLGH G +D Q +S +S G HS+ + +G V+ +G GQLG+ T ++++ VP L+ +L I V H + + ++F WG E S G++ + P ++ L L + QIS G H+ L+ V+ +G N GQLGL + +D +P I F+ S + I+ + + LF +G Sbjct: 29 CVFDGRGLKEVACGNQHSLFLL-------HDGSVYTCGSNSCGQLGHDKGGSRPELVGALDAQKISG------------------VSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWG------------ENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRA------VPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFG 267
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Zebrafish
Match: rpgrb (retinitis pigmentosa GTPase regulator b [Source:ZFIN;Acc:ZDB-GENE-081015-2]) HSP 1 Score: 98.2117 bits (243), Expect = 4.375e-20 Identity = 107/399 (26.82%), Postives = 166/399 (41.60%), Query Frame = 1 Query: 2998 EIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIE-LSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQ------KIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKL---------FVWGRCGH-SLIQEHIKNPVSDTLKPQLLIEYQHVVDNHLAWKNCFGIDTVVNGIPKIISKKQLMI 4143 ++ +IS G H ++TE+G L+ G+N GQLG L + VNK C+ + + + A G H+ +V TS +++ G GQLG GD +D+ S L+ FN G PI+ L+ G S LT G +Y +G+NS GQ+G+ +L P V + V V Y+H+ T ++T+G EK G++ + + Q ++ Q++CG H LT+ + VY FG +GQLG G + E +P ++ G + EN T L F GR G L +E+ N TL P+ L + H V C G +V P+ L++ Sbjct: 36 DVPLRISCGDEHTALVTENGKLFMFGSNNWGQLG-----LGTKTTVNKPTCVKALKSERVKL----------TACGRTHT---LVFTSR----GNLYACGGNNEGQLGLGDCNDR-TSFHLVEFFNKQG-----PIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVS-VGKRVFWVSCGYYHSAFVTVDGALYTFG------------EKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQVACGGGHTVALTENE-VYSFGLGQFGQLGHGTF-----IFESRLPRVVEHFRK--GRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSV-------TCGGCHMLVLAKPRTERPDDLIL 378 HSP 2 Score: 53.1434 bits (126), Expect = 3.323e-6 Identity = 48/203 (23.65%), Postives = 88/203 (43.35%), Query Frame = 1 Query: 3325 GDIDDQFVSKRLIFDFNNSGSGQ----------EFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEK--SHGEISIPESIYTGDLLSNQ-KIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVS 3894 G+ +D+ +F F S + P+ +S G H+ ++T G ++ FG+N++GQLG+ T P V L + + T C +FT N++ N+E G+ + S + + + Q I ++ G+ ++ LT +Y +G N GQ+GLG + EV++ + +VS Sbjct: 3 GETEDEIPESGAVFTFGKSKFADNAPSKFWLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKL------TACGRTHTLVFT--SRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKRVFWVS 197
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Zebrafish
Match: rpgrb (retinitis pigmentosa GTPase regulator b [Source:ZFIN;Acc:ZDB-GENE-081015-2]) HSP 1 Score: 98.2117 bits (243), Expect = 6.653e-20 Identity = 79/286 (27.62%), Postives = 121/286 (42.31%), Query Frame = 1 Query: 2998 EIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQF------VSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQT--LQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLG 3831 E ++ + G+ H L+ T G+LY+ G N GQLG+ C L+ N I +AAG S A+ TQ+ ++ WG GQ+G G + V KR+ + +S G +HS +T G +Y FG G+LG+ T L VP V +P V+ V HTV T NE++++G+ Q L H E +P + + ++ +CG H +++TD +Y FG G+LGLG Sbjct: 88 ERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGL-------------GDCNDRTSFHLVEF-FNKQGPIKMLAAGSNTSAAL-------TQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKRVFW--------------VSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQVACGGGHTVALT-ENEVYSFGLG-QFGQ--LGHGTFIFESRLPRVV---EHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLG 331 HSP 2 Score: 97.0561 bits (240), Expect = 1.700e-19 Identity = 107/395 (27.09%), Postives = 164/395 (41.52%), Query Frame = 1 Query: 3010 QISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIE-LSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQ------KIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKL---------FVWGRCGH-SLIQEHIKNPVSDTLKPQLLIEYQHVVDNHLAWKNCFGIDTVVNGIPKIISKKQLMI 4143 +IS G H ++TE+G L+ G+N GQLG L + VNK C+ + + + A G H+ +V TS +++ G GQLG GD +D+ S L+ FN G PI+ L+ G S LT G +Y +G+NS GQ+G+ +L P V + V V Y+H+ T ++T+G EK G++ + + Q ++ Q++CG H LT+ + VY FG +GQLG G + E +P ++ G + EN T L F GR G L +E+ N TL P+ L + H V C G +V P+ L++ Sbjct: 40 RISCGDEHTALVTENGKLFMFGSNNWGQLG-----LGTKTTVNKPTCVKALKSERVKL----------TACGRTHT---LVFTSR----GNLYACGGNNEGQLGLGDCNDR-TSFHLVEFFNKQG-----PIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVS-VGKRVFWVSCGYYHSAFVTVDGALYTFG------------EKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQVACGGGHTVALTENE-VYSFGLGQFGQLGHGTF-----IFESRLPRVVEHFRK--GRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSV-------TCGGCHMLVLAKPRTERPDDLIL 378 HSP 3 Score: 52.7582 bits (125), Expect = 5.002e-6 Identity = 46/194 (23.71%), Postives = 85/194 (43.81%), Query Frame = 1 Query: 3325 GDIDDQFVSKRLIFDFNNSGSGQ----------EFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDT-KYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQ-KIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNI 3870 G+ +D+ +F F S + P+ +S G H+ ++T G ++ FG+N++GQLG+ T P V L + + HT+ T+ ++ G + N Q L G+ + S + + + Q I ++ G+ ++ LT +Y +G N GQ+GLG + EV++ Sbjct: 3 GETEDEIPESGAVFTFGKSKFADNAPSKFWLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGN-NEGQLGL------GDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSV 189
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Zebrafish
Match: herc4 (HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-070801-1]) HSP 1 Score: 96.2857 bits (238), Expect = 2.586e-19 Identity = 84/303 (27.72%), Postives = 131/303 (43.23%), Query Frame = 1 Query: 2932 LGFIKEKSNRILLLPKSIE--SGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLV--PNLVDRLPPAVI-HVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLG 3825 LG I E+ +LL P+ E GK + R + G+ H + L E G++Y+ G N+ GQLG E K V+ + + I +++ G+ H+ A+ VF WG G GQLG ++D R + + Q ++ G +HS+ L G ++ +G N YGQLG+ Q + V P ++ L + H+ T S IF WG + Q L P + T L +Q++ I CG H + LT + V+ FG+ +GQLG Sbjct: 14 LGGIDEE---VLLEPRRCEFFEGKRV-RDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGHEKARKKPEQVVSLDA-----------------QNIVAVSCGEAHTLAL-------NDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQ-----VACGYWHSLALARGGEIFSWGQNKYGQLGLGQ-QGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRN-KFGQLGLGDNDDR---RFPVLLKT---LRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275 HSP 2 Score: 72.4034 bits (176), Expect = 5.130e-12 Identity = 58/231 (25.11%), Postives = 101/231 (43.72%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPA-VIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKD---NKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGR 3963 + WG GQLG G ID++ + + +F ++ + G H+V L G VY G N GQLG + +K P V L ++ V HT+ ++F WG+ + L + +P ++ + LS I Q++CG H+ L ++ +G N +GQLGLG + + +++ +P +S+ + ++ S +F WGR Sbjct: 1 MLCWGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRD----VGCGRRHTVFLLEDGTVYTCGCNDLGQLGHEKARKK--PEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSD---GQLGLSIVEDCLRVPRTVKS---LSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTL---SGAIFGWGR 216 HSP 3 Score: 70.4774 bits (171), Expect = 1.707e-11 Identity = 71/276 (25.72%), Postives = 117/276 (42.39%), Query Frame = 1 Query: 3271 QNSHVFTWGWGVHGQLGHGDI---DDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL-VPNLVDRLPPA-VIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENST-----KLFVWGRCGHSLIQEHIKNPVSDTLKPQLLIEYQHVVDNHLA 4068 ++ V+T G GQLGH +Q VS D N + +S G H++ L +KG V+ +G S GQLG+ ++ L VP V L + V Y+H++ EIF+WG + L + + P+ I + L QIS G H+ LT ++ +G N +GQLGLG+ D + PV + + S + I + + +F +G G+ + N + + P+ + E V + +A Sbjct: 51 EDGTVYTCGCNDLGQLGHEKARKKPEQVVS----LDAQNI-------VAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNK---YGQLGLGQQGACVCSPQVIQS---LQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRR------FPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTNHEVNPRKVFELMGSVVSQIA 300 HSP 4 Score: 60.4622 bits (145), Expect = 2.248e-8 Identity = 54/189 (28.57%), Postives = 93/189 (49.21%), Query Frame = 1 Query: 2974 PKSIESGKEI-IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSV-ILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLV 3534 P+ I+S + I QIS G H+ LT SG+++ G N+ GQLG+ ++ ++ P+L+ L S + ++ I G+ H+ A+ T+ VFT+G G +GQLGH + + V+ R +F+ S Q ++ G H++ + + G + FG GQLG ++ + P V Sbjct: 181 PQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRR-------------FPVLLKT-LRSQQVVY-ICCGEDHTAAL-------TKEGGVFTFGAGGYGQLGHNSTNHE-VNPRKVFELMGSVVSQ-----IACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPTPV 341
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Zebrafish
Match: herc2 (HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070718-6]) HSP 1 Score: 92.0485 bits (227), Expect = 6.322e-18 Identity = 101/344 (29.36%), Postives = 147/344 (42.73%), Query Frame = 1 Query: 2974 PKSIESGKEI-IRQISL--GKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSK--------RLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHG---EISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLG--NRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSE--NSTKL 3948 P +ES + + IR++++ G H L L+ G LYS G E G+LG N++ C P +I L E + IAAG HS I T + ++TWG G +G+LGHGD +DQ K R+I SG Q ++ LT+ V+ +G+ YG+LG VP +D L V+ V+ +V T S ++TWG H HG + P + L +K+ I+ G+ H T+ VY +G N GQLG G N LV I+ V+ T+A S S+ N+ KL Sbjct: 4024 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLG----------HGNRSPC---DRPRVIE-SLRGVEVV-DIAAGGAHSACI-------TASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQ------------TLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG-------KGDYHRLGHGSDDHVRRPRQVQG---LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKL 4323 HSP 2 Score: 80.1073 bits (196), Expect = 2.749e-14 Identity = 68/265 (25.66%), Postives = 118/265 (44.53%), Query Frame = 1 Query: 2974 PKSIESGK-EIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLP-PAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHA 3762 P+ IE+ K + IR I+ G +H+ +T SG LYS G E G+LG ++ + + P L+ + L + +A G + + + T VF+WG G G+LG G + + + I N G Q + G S+ LT G V+ +G Y +LG T P +V+ L ++HV H + T + ++F WG ++ + ++ +G ++ L QKI +++CG+ H+ Sbjct: 3084 PRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-------------LRPKLVKVLLGHR--VVQVACGSRDAQTLAL-----TDEGMVFSWGDGDFGKLGRGGSEGCNIPQN-IERLNGQGVCQ-----IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWG-------DNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3315 HSP 3 Score: 76.6406 bits (187), Expect = 3.390e-13 Identity = 75/308 (24.35%), Postives = 137/308 (44.48%), Query Frame = 1 Query: 2953 SNRILLLPKSIES-GKEIIRQISL--GKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGC--FHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLP-PAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHG---EISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNK 3849 S+ + +P+ I + +++++++ G HA+ LT G ++S G + G+LG H + N P LI E + I IA G HS AI T + +++WG G +G+LGHGD Q K + + ++++ G ++ LT++G V+ +G+ +G+LG + +P ++RL V ++ ++ T S ++TWG HG + P+ + + L +KI ++ G H +T+ V+ +G N GQ G G N+ Sbjct: 3023 SSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLG---HFSRMNC----------DKPRLI--EALKTKRIRDIACGSSHSAAI-------TSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHR------VVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG-------KGDYFRLGHGTDVHVRKPQMV---EGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNR 3292 HSP 4 Score: 68.9366 bits (167), Expect = 6.145e-11 Identity = 63/263 (23.95%), Postives = 116/263 (44.11%), Query Frame = 1 Query: 3031 HALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPA-VIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHG---EISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSN 3807 H L L+ +G ++S G + G+LG + +++ + +S+ + + + IA G +S AI T + + TWG G +G+LGHG +DQ + L+ + + G ++ +T G V+ +G+ YG+LG P LV++L ++ V +V T +++TWG N HG + P+ + D L +++ I+ G+ H LT++ V+ +GSN Sbjct: 496 HYLALSVNGEVFSWGCGDGGRLGHGD-----TTYLEEPTMISVFSGRPVGKQ------VVHIACGSTYSAAI-------TADGELHTWGRGNYGRLGHGSSEDQ-TTPMLVTALKGL---KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWG-------KGDNQRLGHGTDEHVRYPKLL---DSLQGKRVVDIAVGSTHCLALTEEGEVHSWGSN 726
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Xenopus
Match: rcbtb2 (regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:NCBI gene;Acc:448359]) HSP 1 Score: 98.2117 bits (243), Expect = 2.515e-20 Identity = 90/327 (27.52%), Postives = 151/327 (46.18%), Query Frame = 1 Query: 3028 NHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL--PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVP--IDFVSSDDGITIAMSKSENSTKLFVWGRC-GHSLIQEHI 3993 N L LT++ ++ GTN G LG + SI+ P I++ S + I S++ Y SG VV T + V++WG + QLG+G + ++ + N + I ++ G HS++LT G VY +G N+ GQ+G + +P V VI + ++ + E++ WG + N Q L S G P I L ++ Q+ CG H LTD+ +Y +G+N +GQLG GN+ + V+V + ++ + T A +KS+ S ++++WG+C G S+I H+ Sbjct: 31 NEVLYLTKNDEVFVMGTNSSGCLGTGD-------------AQSILEPR--RIDMLSGKRIVSLS---YGSGPHVVIV---TSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKA-----ISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGN-GQLGLG---SSGNQPTPCRIAA---LQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSA-AKSQ-SGQVYMWGQCRGQSVITPHL 322 HSP 2 Score: 71.2478 bits (173), Expect = 8.351e-12 Identity = 65/234 (27.78%), Postives = 105/234 (44.87%), Query Frame = 1 Query: 2935 GFIKEKSNRILLLPKSIE--SGKEIIRQISLGKN-HALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWG 3624 G + + +L P+ I+ SGK I+ +S G H +I+T G +YS G N QLG + NQ LS P ++ L + + I S+A G +HS + T + V+ WG+ GQ+G G +Q + +++ N + I ++ G S+ + + G VY +G N GQLG+ + P + L V V Y HT+ T ++ WG Sbjct: 51 GCLGTGDAQSILEPRRIDMLSGKRIV-SLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNG----------STNQALS---PCQVSTNLINKKAI-SVACGSHHSMVL-------TCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQN-----KTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWG 257 HSP 3 Score: 67.3958 bits (163), Expect = 1.429e-10 Identity = 57/207 (27.54%), Postives = 95/207 (45.89%), Query Frame = 1 Query: 3013 ISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIE-LSMGCFHSVILTNKGFVYCFGNNSYGQLGV--QTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWG 3624 ++ G +H+++LT G +Y+ G N GQ+G S NQ + P + L ++ + IA G S A+V N V+ WG+ +GQLG G +Q R+ + Q +E + G H++ LT++G +Y +G NSYGQLG ++ Q V +VD+ I + + S +++ WG Sbjct: 132 VACGSHHSMVLTCDGEVYAWGYNNSGQVG---------SGSTANQPI----PRKVTSCLQ-NKTVIGIACGQMSSMAVV-------DNGEVYAWGYNGNGQLGLGSSGNQPTPCRI-------AALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Xenopus
Match: rcbtb2 (regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:NCBI gene;Acc:448359]) HSP 1 Score: 98.5969 bits (244), Expect = 2.810e-20 Identity = 90/327 (27.52%), Postives = 151/327 (46.18%), Query Frame = 1 Query: 3028 NHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL--PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVP--IDFVSSDDGITIAMSKSENSTKLFVWGRC-GHSLIQEHI 3993 N L LT++ ++ GTN G LG + SI+ P I++ S + I S++ Y SG VV T + V++WG + QLG+G + ++ + N + I ++ G HS++LT G VY +G N+ GQ+G + +P V VI + ++ + E++ WG + N Q L S G P I L ++ Q+ CG H LTD+ +Y +G+N +GQLG GN+ + V+V + ++ + T A +KS+ S ++++WG+C G S+I H+ Sbjct: 52 NEVLYLTKNDEVFVMGTNSSGCLGTGD-------------AQSILEPR--RIDMLSGKRIVSLS---YGSGPHVVIV---TSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKA-----ISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGN-GQLGLG---SSGNQPTPCRIAA---LQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSA-AKSQ-SGQVYMWGQCRGQSVITPHL 343 HSP 2 Score: 71.2478 bits (173), Expect = 8.844e-12 Identity = 65/234 (27.78%), Postives = 105/234 (44.87%), Query Frame = 1 Query: 2935 GFIKEKSNRILLLPKSIE--SGKEIIRQISLGKN-HALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWG 3624 G + + +L P+ I+ SGK I+ +S G H +I+T G +YS G N QLG + NQ LS P ++ L + + I S+A G +HS + T + V+ WG+ GQ+G G +Q + +++ N + I ++ G S+ + + G VY +G N GQLG+ + P + L V V Y HT+ T ++ WG Sbjct: 72 GCLGTGDAQSILEPRRIDMLSGKRIV-SLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNG----------STNQALS---PCQVSTNLINKKAI-SVACGSHHSMVL-------TCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQN-----KTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWG 278 HSP 3 Score: 67.3958 bits (163), Expect = 1.570e-10 Identity = 57/207 (27.54%), Postives = 95/207 (45.89%), Query Frame = 1 Query: 3013 ISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIE-LSMGCFHSVILTNKGFVYCFGNNSYGQLGV--QTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWG 3624 ++ G +H+++LT G +Y+ G N GQ+G S NQ + P + L ++ + IA G S A+V N V+ WG+ +GQLG G +Q R+ + Q +E + G H++ LT++G +Y +G NSYGQLG ++ Q V +VD+ I + + S +++ WG Sbjct: 153 VACGSHHSMVLTCDGEVYAWGYNNSGQVG---------SGSTANQPI----PRKVTSCLQ-NKTVIGIACGQMSSMAVV-------DNGEVYAWGYNGNGQLGLGSSGNQPTPCRI-------AALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 331
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Xenopus
Match: rcbtb2 (regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:NCBI gene;Acc:448359]) HSP 1 Score: 98.2117 bits (243), Expect = 2.947e-20 Identity = 90/327 (27.52%), Postives = 151/327 (46.18%), Query Frame = 1 Query: 3028 NHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL--PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVP--IDFVSSDDGITIAMSKSENSTKLFVWGRC-GHSLIQEHI 3993 N L LT++ ++ GTN G LG + SI+ P I++ S + I S++ Y SG VV T + V++WG + QLG+G + ++ + N + I ++ G HS++LT G VY +G N+ GQ+G + +P V VI + ++ + E++ WG + N Q L S G P I L ++ Q+ CG H LTD+ +Y +G+N +GQLG GN+ + V+V + ++ + T A +KS+ S ++++WG+C G S+I H+ Sbjct: 43 NEVLYLTKNDEVFVMGTNSSGCLGTGD-------------AQSILEPR--RIDMLSGKRIVSLS---YGSGPHVVIV---TSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKA-----ISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGN-GQLGLG---SSGNQPTPCRIAA---LQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSA-AKSQ-SGQVYMWGQCRGQSVITPHL 334 HSP 2 Score: 71.2478 bits (173), Expect = 8.593e-12 Identity = 65/234 (27.78%), Postives = 105/234 (44.87%), Query Frame = 1 Query: 2935 GFIKEKSNRILLLPKSIE--SGKEIIRQISLGKN-HALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWG 3624 G + + +L P+ I+ SGK I+ +S G H +I+T G +YS G N QLG + NQ LS P ++ L + + I S+A G +HS + T + V+ WG+ GQ+G G +Q + +++ N + I ++ G S+ + + G VY +G N GQLG+ + P + L V V Y HT+ T ++ WG Sbjct: 63 GCLGTGDAQSILEPRRIDMLSGKRIV-SLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNG----------STNQALS---PCQVSTNLINKKAI-SVACGSHHSMVL-------TCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQN-----KTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWG 269 HSP 3 Score: 67.3958 bits (163), Expect = 1.516e-10 Identity = 57/207 (27.54%), Postives = 95/207 (45.89%), Query Frame = 1 Query: 3013 ISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIE-LSMGCFHSVILTNKGFVYCFGNNSYGQLGV--QTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWG 3624 ++ G +H+++LT G +Y+ G N GQ+G S NQ + P + L ++ + IA G S A+V N V+ WG+ +GQLG G +Q R+ + Q +E + G H++ LT++G +Y +G NSYGQLG ++ Q V +VD+ I + + S +++ WG Sbjct: 144 VACGSHHSMVLTCDGEVYAWGYNNSGQVG---------SGSTANQPI----PRKVTSCLQ-NKTVIGIACGQMSSMAVV-------DNGEVYAWGYNGNGQLGLGSSGNQPTPCRI-------AALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 322
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Xenopus
Match: rcbtb1 (regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:NCBI gene;Acc:550106]) HSP 1 Score: 97.0561 bits (240), Expect = 7.461e-20 Identity = 88/351 (25.07%), Postives = 149/351 (42.45%), Query Frame = 1 Query: 2956 NRILLLPKSIE--SGKEIIRQISLGKN-HALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVP-NLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGRC-GHSLIQEHI 3993 N+ ++P+ ++ GK I+ +S G H L+ E G +YS G N QLG N + + P+ + +EL + + + +A G +HS A+ T + VF WG+ GQ+G G +Q V +R+ + + + ++ G S+ +T+ G VYC+G N GQLG+ L+P LV + H VC I Q+ G H L+D+ +Y +G+N GQLG+GN+ + V+V + V++ I+ +KS+ S ++++WG C G SL+ H+ Sbjct: 128 NQSTIIPRRLDVLCGKRIV-DLSYGSGPHILVCNEDGEVYSWGHNGYSQLGNGNAIQG-------------VAPVQVCMELLAKK-VVQVACGSHHSMAL-------TSDGEVFCWGYNNCGQVGSGTTANQSVPRRVSATLQS-----KVVVSIAAGQSSSMAVTDNGHVYCWGYNGTGQLGIGNTGNQLMPCRLV-------------FAHPVC----------------------------------------------IIQVVLGYAHTLALSDQGVLYAWGANSHGQLGIGNKSNQTAPVKVGTNERMVEVTACHSTNISAAKSQ-SGQVYMWGLCRGQSLLSPHL 391
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Xenopus
Match: prxl2b (peroxiredoxin like 2B [Source:Xenbase;Acc:XB-GENE-968463]) HSP 1 Score: 94.7449 bits (234), Expect = 9.348e-19 Identity = 82/290 (28.28%), Postives = 132/290 (45.52%), Query Frame = 1 Query: 2998 EIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHG-DIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGI--HPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHA-SILTDKQFVYCFGSNVWGQLGLGNRKDNKN 3852 +II +S G+ H L L + G ++S G GQ+G+ ++ + NI+ SD I +A G +HS A+ +++S +F+WG +GQLG G +I + + + S SG F ++ G HS LT G ++ +G N +GQLG+ VP L+ L +IH+ HT T +FT+G + + NS NHE + P ++ L + QI+CG H + + +Y FG GQLG G+ + K+ Sbjct: 84 QIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLST----AEEYIRVPR----------NIKSLSDVQIVQVACGHHHSLAL-------SKDSDIFSWGQNQYGQLGLGLEIKKECAPRHI-----KSLSGIPFA-HIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVN------PRKVFE---LMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKS 337 HSP 2 Score: 92.0485 bits (227), Expect = 5.752e-18 Identity = 69/276 (25.00%), Postives = 119/276 (43.12%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQ-TLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLG 3825 +R + G H + + + G++Y+ G N+ GQLG + K + + I +++ G+ H+ A+ VF+WG V+GQ+G ++ R I ++ ++++ G HS+ L+ ++ +G N YGQLG+ ++K P + L H+ H+ T S IF WG + Q L E ++ +S L +QKI I CG H + LT + V+ FG+ +GQLG Sbjct: 36 VRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRRKPE-----------------QVGALDAQIIVAVSCGEAHTLAL-------NDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQI-----VQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRN-KFGQLGLTDETDRNVPALLKS------LRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275 HSP 3 Score: 79.7221 bits (195), Expect = 3.873e-14 Identity = 65/233 (27.90%), Postives = 110/233 (47.21%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFV--SKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVI-HVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLG---NRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGR 3963 + WG GQLG G ID++ V +R F N + ++ G H+V + + G VY G N GQLG ++ P V L +I V HT+ ++F+WG H Q L+ + + I +P +I + LS+ +I Q++CG H+ L+ ++ +G N +GQLGLG ++ ++ +P +++ G + A++ S +F WGR Sbjct: 1 MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVR------DVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRRK--PEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWG-HAVYGQIGLSTAEEY--IRVPRNIKS---LSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTI---SGAIFGWGR 216 HSP 4 Score: 69.707 bits (169), Expect = 4.284e-11 Identity = 64/225 (28.44%), Postives = 106/225 (47.11%), Query Frame = 1 Query: 2971 LPKSIESGKEI-IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVI-HVDTKYFHTVC-CTASNEIFTWGIHPN 3636 +P++I+S ++ I Q++ G +H+L L++ ++S G N+ GQLG+ + K +C +I+ S IAAG HS A+ +S + +F WG GQLG D D+ V L S Q+ I + G H+ LT +G V+ FG YGQLG + + P V L +++ + HT+ +S I+++G+ N Sbjct: 127 VPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEI--------KKECAPR------HIKSLSGIPFAHIAAGGGHSFALTISGA-------IFGWGRNKFGQLGLTDETDRNVPALL-----KSLRSQKI-IHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGN 324 HSP 5 Score: 65.0846 bits (157), Expect = 9.835e-10 Identity = 69/285 (24.21%), Postives = 113/285 (39.65%), Query Frame = 1 Query: 3181 IELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGH----------GDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL-VPNLVDRLPPA-VIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEIS---IPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENST-----KLFVWGRCGHS 3975 + L C F I G T + V+T G GQLGH G +D Q + + +S G H++ L +KG V+ +G+ YGQ+G+ T ++ + VP + L ++ V + H++ + ++IF+WG QN EI P I + LS A I+ G H+ LT ++ +G N +GQLGL + D N+P + + S I I + + +F +G G+ Sbjct: 21 VVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRRKPEQVGALDAQII------------------VAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWG------QNQYGQLGLGLEIKKECAPRHIKS---LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDR------NVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYG 272
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Mouse
Match: Herc3 (hect domain and RLD 3 [Source:MGI Symbol;Acc:MGI:1921248]) HSP 1 Score: 112.464 bits (280), Expect = 3.006e-24 Identity = 86/285 (30.18%), Postives = 130/285 (45.61%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGV-QTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKN 3852 I++++ G NH++ L E G +Y+ G N GQLG E NK + + + +D+ I +A G+ HS A+ + +F+WG G GQLG +D RLI N Q+ +++S G +H + L G + +G NS+GQLG+ + P V L + V H+ + S +F WG++ N Q L+ EK ES LL QK+ ISCG H ++LT V+ FG+ GQLG + D N Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREG-------NKPEQIGAL----------ADQHIIHVACGESHSLAL-------SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLN-----QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN-NAGQLGLSDEKDR------ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN 284 HSP 2 Score: 82.0333 bits (201), Expect = 5.904e-15 Identity = 75/298 (25.17%), Postives = 134/298 (44.97%), Query Frame = 1 Query: 3193 SDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGH---GDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL-VPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISI---------PESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNI--PVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGHSLIQEHIKNPVSDTLKPQLLIE 4038 SD I +A G HS ++ ++ V+T G GQLGH G+ +Q + I ++ G HS+ L+++G ++ +G S GQLG+ T + S+ VP L+ +L ++ V +H + A + FTWG + SHG++ + P+ + + L +AQ++ G H+ L+ V+ +G N GQLGL + KD ++ V + + ++S + T ++KS F G CG + + V+D + P+ ++E Sbjct: 32 SDRSIKEVACGGNHSVFLL-------EDGEVYTCGVNTKGQLGHEREGNKPEQI-----------GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG------------KNSHGQLGLGKEFPSQTSPQRVRS---LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS-GGVFTFGAGSCG-----QLGHDSVNDEVNPRRVLE 290 HSP 3 Score: 63.929 bits (154), Expect = 1.732e-9 Identity = 46/177 (25.99%), Postives = 87/177 (49.15%), Query Frame = 1 Query: 2974 PKSIESGKEI-IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILT-NKGFVYCFGNNSYGQLGV 3498 P+ + S + I + Q++ G H+ L+ SG+++ G N GQLG+ + +++ +++L + + I+ G+ H+ + T++ VFT+G G GQLGH ++D+ V+ R + + S Q ++ G H++ L + G +Y FG + GQLG Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP---------------CHVKLLRTQKVVYISCGEEHTAVL-------TKSGGVFTFGAGSCGQLGHDSVNDE-VNPRRVLELMGSEVTQ-----IACGRQHTLALVPSSGLIYAFGCGAKGQLGT 329 HSP 4 Score: 58.9214 bits (141), Expect = 6.690e-8 Identity = 59/229 (25.76%), Postives = 96/229 (41.92%), Query Frame = 1 Query: 2971 LPKSIES-GKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQ--------FVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLV-DRLPPAVIHVDTKYFHTVCCTASNE-IFTWG 3624 +P+ I+ ++ I Q+S G H L L G ++ G N GQLG+ Q S + + L I + +AAG HS A+ +S + VF WG GQLG D D+ ++++++ +S G H+ +LT G V+ FG S GQLG ++ + P V + + V + HT+ S+ I+ +G Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIP-------------LAQVAAGGAHSFALSLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY--------------ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFG 320
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Mouse
Match: Herc3 (hect domain and RLD 3 [Source:MGI Symbol;Acc:MGI:1921248]) HSP 1 Score: 112.079 bits (279), Expect = 3.251e-24 Identity = 86/285 (30.18%), Postives = 130/285 (45.61%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGV-QTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKN 3852 I++++ G NH++ L E G +Y+ G N GQLG E NK + + + +D+ I +A G+ HS A+ + +F+WG G GQLG +D RLI N Q+ +++S G +H + L G + +G NS+GQLG+ + P V L + V H+ + S +F WG++ N Q L+ EK ES LL QK+ ISCG H ++LT V+ FG+ GQLG + D N Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREG-------NKPEQIGAL----------ADQHIIHVACGESHSLAL-------SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLN-----QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN-NAGQLGLSDEKDR------ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN 284 HSP 2 Score: 82.0333 bits (201), Expect = 5.897e-15 Identity = 75/298 (25.17%), Postives = 134/298 (44.97%), Query Frame = 1 Query: 3193 SDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGH---GDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL-VPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISI---------PESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNI--PVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGHSLIQEHIKNPVSDTLKPQLLIE 4038 SD I +A G HS ++ ++ V+T G GQLGH G+ +Q + I ++ G HS+ L+++G ++ +G S GQLG+ T + S+ VP L+ +L ++ V +H + A + FTWG + SHG++ + P+ + + L +AQ++ G H+ L+ V+ +G N GQLGL + KD ++ V + + ++S + T ++KS F G CG + + V+D + P+ ++E Sbjct: 32 SDRSIKEVACGGNHSVFLL-------EDGEVYTCGVNTKGQLGHEREGNKPEQI-----------GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG------------KNSHGQLGLGKEFPSQTSPQRVRS---LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS-GGVFTFGAGSCG-----QLGHDSVNDEVNPRRVLE 290 HSP 3 Score: 63.929 bits (154), Expect = 1.900e-9 Identity = 46/176 (26.14%), Postives = 87/176 (49.43%), Query Frame = 1 Query: 2974 PKSIESGKEI-IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILT-NKGFVYCFGNNSYGQLG 3495 P+ + S + I + Q++ G H+ L+ SG+++ G N GQLG+ + +++ +++L + + I+ G+ H+ + T++ VFT+G G GQLGH ++D+ V+ R + + S Q ++ G H++ L + G +Y FG + GQLG Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP---------------CHVKLLRTQKVVYISCGEEHTAVL-------TKSGGVFTFGAGSCGQLGHDSVNDE-VNPRRVLELMGSEVTQ-----IACGRQHTLALVPSSGLIYAFGCGAKGQLG 328 HSP 4 Score: 58.5362 bits (140), Expect = 8.318e-8 Identity = 59/229 (25.76%), Postives = 96/229 (41.92%), Query Frame = 1 Query: 2971 LPKSIES-GKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQ--------FVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLV-DRLPPAVIHVDTKYFHTVCCTASNE-IFTWG 3624 +P+ I+ ++ I Q+S G H L L G ++ G N GQLG+ Q S + + L I + +AAG HS A+ +S + VF WG GQLG D D+ ++++++ +S G H+ +LT G V+ FG S GQLG ++ + P V + + V + HT+ S+ I+ +G Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIP-------------LAQVAAGGAHSFALSLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY--------------ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFG 320
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Mouse
Match: Herc4 (hect domain and RLD 4 [Source:MGI Symbol;Acc:MGI:1914595]) HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21 Identity = 89/310 (28.71%), Postives = 139/310 (44.84%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGI--HPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHAS-ILTDKQFVYCFGSNVWGQLGLGNRKDNK-------NLVEVNIPVPIDFVSSD 3900 I ++ G+ H L L + G +Y+ G + GQLG++ +C+ + NI+ SD I +A G YHS A+ ++ S VF WG +GQLG G + S +LI S G F ++++ G HS +LT G ++ +G N +GQLG+ VPNL+ L ++++ HT T +FT+G + + NS +HE + P ++ L + Q++CG H S + +Y FG GQLG G+ + K N N P D S D Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG----------SEECIRVPR----NIKSLSDIQIVQVACGYYHSLAL-------SKASEVFCWGQNKYGQLGLGIDCQKQTSPQLI----KSLLGIPF-MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN------PRKVFE---LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSED 360 HSP 2 Score: 86.6557 bits (213), Expect = 2.007e-16 Identity = 64/231 (27.71%), Postives = 112/231 (48.48%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPA-VIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLG---NRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGR 3963 + WG +GQLG G ID++ V + DF + ++ + G H+V + + G VY G N GQLG + +K P V L ++ V HT+ +++ WG+ + L + S I +P +I + LS+ +I Q++CG H+ L+ V+C+G N +GQLGLG ++ + L++ + +P V++ + ++ S +F WGR Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRD----VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD---GQLGLQGSEECIRVPRNIKS---LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL---SGAIFGWGR 216 HSP 3 Score: 72.7886 bits (177), Expect = 3.622e-12 Identity = 66/233 (28.33%), Postives = 107/233 (45.92%), Query Frame = 1 Query: 2947 EKSNRILLLPKSIESGKEI-IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVI-HVDTKYFHTVC-CTASNEIFTWGIHPN 3636 + S + +P++I+S +I I Q++ G H+L L+++ ++ G N+ GQLG+ KQ S P LI L +AAG HS + +S + +F WG GQLG D +D++V L S Q+ + + G H+ LT +G V+ FG YGQLG + + P V L +++ V HT +S I+++G+ N Sbjct: 119 QGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTS------------PQLIKSLLGIP--FMQVAAGGAHSFVLTLSGA-------IFGWGRNKFGQLGLNDENDRYVPNLL-----KSLRSQKI-VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Mouse
Match: Herc4 (hect domain and RLD 4 [Source:MGI Symbol;Acc:MGI:1914595]) HSP 1 Score: 102.449 bits (254), Expect = 3.366e-21 Identity = 89/310 (28.71%), Postives = 139/310 (44.84%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGI--HPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHAS-ILTDKQFVYCFGSNVWGQLGLGNRKDNK-------NLVEVNIPVPIDFVSSD 3900 I ++ G+ H L L + G +Y+ G + GQLG++ +C+ + NI+ SD I +A G YHS A+ ++ S VF WG +GQLG G + S +LI S G F ++++ G HS +LT G ++ +G N +GQLG+ VPNL+ L ++++ HT T +FT+G + + NS +HE + P ++ L + Q++CG H S + +Y FG GQLG G+ + K N N P D S D Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG----------SEECIRVPR----NIKSLSDIQIVQVACGYYHSLAL-------SKASEVFCWGQNKYGQLGLGIDCQKQTSPQLI----KSLLGIPF-MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN------PRKVFE---LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSED 360 HSP 2 Score: 86.6557 bits (213), Expect = 2.139e-16 Identity = 64/231 (27.71%), Postives = 112/231 (48.48%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPA-VIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLG---NRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGR 3963 + WG +GQLG G ID++ V + DF + ++ + G H+V + + G VY G N GQLG + +K P V L ++ V HT+ +++ WG+ + L + S I +P +I + LS+ +I Q++CG H+ L+ V+C+G N +GQLGLG ++ + L++ + +P V++ + ++ S +F WGR Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRD----VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD---GQLGLQGSEECIRVPRNIKS---LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL---SGAIFGWGR 216 HSP 3 Score: 72.7886 bits (177), Expect = 3.633e-12 Identity = 66/233 (28.33%), Postives = 107/233 (45.92%), Query Frame = 1 Query: 2947 EKSNRILLLPKSIESGKEI-IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVI-HVDTKYFHTVC-CTASNEIFTWGIHPN 3636 + S + +P++I+S +I I Q++ G H+L L+++ ++ G N+ GQLG+ KQ S P LI L +AAG HS + +S + +F WG GQLG D +D++V L S Q+ + + G H+ LT +G V+ FG YGQLG + + P V L +++ V HT +S I+++G+ N Sbjct: 119 QGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTS------------PQLIKSLLGIP--FMQVAAGGAHSFVLTLSGA-------IFGWGRNKFGQLGLNDENDRYVPNLL-----KSLRSQKI-VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Mouse
Match: Rcbtb2 (regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:MGI Symbol;Acc:MGI:1917200]) HSP 1 Score: 100.138 bits (248), Expect = 6.234e-21 Identity = 91/344 (26.45%), Postives = 156/344 (45.35%), Query Frame = 1 Query: 2998 EIIRQISL---GKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL--PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTK-------LFVWGRC-GHSLIQEH 3990 ++IRQ + N L T + ++ GTN G LG+ S I P ++ L + IA+ Y SG +V T + VFTWG + QLG+G + V + + +N + IE++ G +HS++LT+ G V+ +G N+ GQ+G + +P V V+++ ++ + E++ WG + N Q L S G P + L ++ +++CG H +LTD+ +Y +G+N +GQLG GN+ + + P P+ V D I IA S +++ +++WG+C G S+I H Sbjct: 43 QLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGV-------------GDIQSTIEPRRLD-SLTGKK----IASLSYGSGPHIVLA---TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-----KQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGN-GQLGLG---SSGNQPTPCRVAA---LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQ------SYPTPV-VVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPH 346
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. UniProt/SwissProt
Match: sp|Q5DX34|RPGRH_CAEEL (X-linked retinitis pigmentosa GTPase regulator homolog OS=Caenorhabditis elegans OX=6239 GN=glo-4 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.241e-23 Identity = 96/369 (26.02%), Postives = 161/369 (43.63%), Query Frame = 1 Query: 2971 LPKSIESGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSD-ECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDD--QFVSKR---LIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQT-LQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQ------------------------NSLNHEKSHGEISIPESIYTGDL-------LSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGR 3963 LP+ +E R I+ G H L+L+ SG L + G N GQ G+ H + ++ +H +++ D I IA G +HS I S ++T+GWGV GQLGHG ++ Q V R LI +++ G H+V+LT+ G V G+ SYGQ+GV ++K + P V + T Y+H++C T N +F WG +P + S N +++P I DL + I ++CG H++++T + +Y +G + QLG GN+ + +V P +V+ G ++ +++ + +F WG+ Sbjct: 761 LPRVLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGV-GHSFR----------IANLH------QVDGDWPAIEKIACGQFHSAFICSDGS-------LWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVT----------QIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGS-VFAWGK 1094
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. UniProt/SwissProt
Match: sp|Q15034|HERC3_HUMAN (Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens OX=9606 GN=HERC3 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.812e-23 Identity = 85/285 (29.82%), Postives = 130/285 (45.61%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGV-QTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKN 3852 +++++ G NH++ L E G +Y+ G N GQLG E NK + + + +D+ I +A G+ HS A+ + +F+WG G GQLG +D RLI N Q+ +++S G +H + L G + +G NS+GQLG+ + P V L + V H+ + S +F WG++ N Q L+ EK ES LL QK+ ISCG H ++LT V+ FG+ GQLG + D N Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREG-------NKPEQIGAL----------ADQHIIHVACGESHSLAL-------SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLN-----QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN-NAGQLGLSDEKDR------ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284 HSP 2 Score: 80.4925 bits (197), Expect = 1.151e-13 Identity = 73/298 (24.50%), Postives = 134/298 (44.97%), Query Frame = 1 Query: 3193 SDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGH---GDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL-VPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISI---------PESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNI--PVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGHSLIQEHIKNPVSDTLKPQLLIE 4038 SD + +A G HS ++ ++ V+T G GQLGH G+ +Q + I ++ G HS+ L+++G ++ +G S GQLG+ T + S+ VP L+ +L ++ V +H + A + FTWG + SHG++ + P+ + + L +AQ++ G H+ L+ V+ +G N GQLGL + KD ++ V + + ++S + T ++KS F G CG + + ++D + P+ ++E Sbjct: 32 SDRSVKEVACGGNHSVFLL-------EDGEVYTCGLNTKGQLGHEREGNKPEQI-----------GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG------------KNSHGQLGLGKEFPSQASPQRVRS---LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS-GGVFTFGAGSCG-----QLGHDSMNDEVNPRRVLE 290 HSP 3 Score: 62.003 bits (149), Expect = 4.933e-8 Identity = 45/177 (25.42%), Postives = 87/177 (49.15%), Query Frame = 1 Query: 2974 PKSIESGKEI-IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSV-ILTNKGFVYCFGNNSYGQLGV 3498 P+ + S + I + Q++ G H+ L+ SG+++ G N GQLG+ + +++ +++L + + I+ G+ H+ + T++ VFT+G G GQLGH ++D+ V+ R + + S Q ++ G H++ + + G +Y FG + GQLG Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP---------------CHVKLLRTQKVVYISCGEEHTAVL-------TKSGGVFTFGAGSCGQLGHDSMNDE-VNPRRVLELMGSEVTQ-----IACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329 HSP 4 Score: 58.5362 bits (140), Expect = 5.224e-7 Identity = 59/229 (25.76%), Postives = 96/229 (41.92%), Query Frame = 1 Query: 2971 LPKSIES-GKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQ--------FVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLV-DRLPPAVIHVDTKYFHTVC-CTASNEIFTWG 3624 +P+ I+ ++ I Q+S G H L L G ++ G N GQLG+ Q S + + L I + +AAG HS A+ +S + VF WG GQLG D D+ ++++++ +S G H+ +LT G V+ FG S GQLG ++ + P V + + V + HT+ +S I+ +G Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIP-------------LAQVAAGGAHSFALSLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY--------------ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. UniProt/SwissProt
Match: sp|Q9FN03|UVR8_ARATH (Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.276e-23 Identity = 87/309 (28.16%), Postives = 150/309 (48.54%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFV-NKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVI-HVDTKYFHTVCCTASNEIFTWGIHPNIWQ--------NSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSD 3900 I+QI+ G +H L +T G + S G N+ GQLG+ + ++S V K Q I I +AAG H+ A+ T++ ++ WGWG +G LG GD D+ V +R+ + +G E ++ G H++ ++ G +Y +G + YGQLG L+ L+P+ ++ L + I + + HT+ T+ +++ WG W N+L+ + S ++ P+ +QK+ Q+SCG H +T++ V+ +G GQLG+G V+ N P I+ +S D Sbjct: 122 IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGD---TEDSLVPQKIQAFEGIR-------------IKMVAAGAEHTAAV-------TEDGDLYGWGWGRYGNLGLGDRTDRLVPERV------TSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWG-----WNKFGQVGVGNNLD-QCSPVQVRFPD---------DQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGES------VDRNFPKIIEALSVD 380 HSP 2 Score: 88.5817 bits (218), Expect = 1.137e-16 Identity = 96/335 (28.66%), Postives = 150/335 (44.78%), Query Frame = 1 Query: 2992 GKEIIRQISLGKNHALILTESG-SLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEF-PIELSM---GCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIH-VDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEIS---IPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGI--TIAMSKSENSTKLFVWGR 3963 G +I+ ++ G +H + ++SG +YS G + G+LG N +S + + +H + I IA GD H A+ T V +WG +GQLG GD +D V +++ Q F I + M G H+ +T G +Y +G YG LG+ LVP V + V + HT+ + S ++T+G W S + HG++ IP + + LSN I+QIS G H LT +Y +G N +GQ+G+GN D + V+V P V G T+A+++ N +F WGR Sbjct: 66 GHQIV-SVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGN-----SSDLFTPLPIKALHGIRIK----------QIACGDSHCLAV-------TMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI----------QAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYG-----W--SKYGQLGHGDLEDHLIPHKL---EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNN---VFAWGR 354 HSP 3 Score: 58.5362 bits (140), Expect = 3.974e-7 Identity = 49/205 (23.90%), Postives = 99/205 (48.29%), Query Frame = 1 Query: 2941 IKEKSNRILLLPKSIES-GKEIIRQISLGKNHALILTESGSLYSAGTNECGQLG---IENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL 3543 + ++++R L+P+ + S G E + ++ G H + ++ SG+LY+ G ++ GQLG +E+H++ +E S+ I I+ G H+ A+ T + ++ WGW GQ+G G+ DQ ++ F + + +++S G H++ +T + V+ +G + GQLG+ P +++ L Sbjct: 206 LGDRTDR--LVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH------------------KLEALSNSFISQISGGWRHTMAL-------TSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDD------QKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 377
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. UniProt/SwissProt
Match: sp|Q5RCZ7|RCBT2_PONAB (RCC1 and BTB domain-containing protein 2 OS=Pongo abelii OX=9601 GN=RCBTB2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.481e-22 Identity = 97/346 (28.03%), Postives = 158/346 (45.66%), Query Frame = 1 Query: 2998 EIIRQISL---GKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTA---SNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTK-------LFVWGRC-GHSLIQEHI 3993 ++IRQ + N L T + ++ GTN CG LG+ S I P ++ LN + IA Y SG +V T VFTWG + QLG+G + V + + +N + IE++ G +HS++LT+ G V+ +G N+ GQ+G + +P V + V T +CC A + E++ WG + N Q L + G P + L ++ +++CG H +LTD+ VY +G+N +GQLG GN+ + + P P+ V D I IA S +++ +++WG+C G S+I H+ Sbjct: 43 QLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL-------------GDVQSTIEPRRLD-SLNGKK----IACLSYGSGPHIVLA---TTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-----KQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNGN-GQLGLGNS---GNQPTPCRVAA---LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ------SYPTPVT-VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHL 347
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. UniProt/SwissProt
Match: sp|O95199|RCBT2_HUMAN (RCC1 and BTB domain-containing protein 2 OS=Homo sapiens OX=9606 GN=RCBTB2 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.481e-22 Identity = 97/346 (28.03%), Postives = 158/346 (45.66%), Query Frame = 1 Query: 2998 EIIRQISL---GKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTA---SNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTK-------LFVWGRC-GHSLIQEHI 3993 ++IRQ + N L T + ++ GTN CG LG+ S I P ++ LN + IA Y SG +V T VFTWG + QLG+G + V + + +N + IE++ G +HS++LT+ G V+ +G N+ GQ+G + +P V + V T +CC A + E++ WG + N Q L + G P + L ++ +++CG H +LTD+ VY +G+N +GQLG GN+ + + P P+ V D I IA S +++ +++WG+C G S+I H+ Sbjct: 43 QLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGL-------------GDVQSTIEPRRLD-SLNGKK----IACLSYGSGPHIVLA---TTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-----KQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNGN-GQLGLGNS---GNQPTPCRVAA---LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ------SYPTPVT-VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHL 347
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. TrEMBL
Match: V3ZRX2 (Uncharacterized protein OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_236486 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 7.205e-39 Identity = 114/352 (32.39%), Postives = 180/352 (51.14%), Query Frame = 1 Query: 2965 LLLPKSIESGKEI---IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPI-ELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIP-----ESIYTGDLLS----NQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPI------DFVSSDDGITIAMSKSENSTKLFVWGR 3963 + LP +E+ + + +S G H ++LT+ G +Y G++ GQ+G+ + PML+ L+ E + ++ G YH+ A+ T V++WGWGVHGQLG GD +DQ + K + D+ N EF + ++S G HS+ LT KG VY G +GQLG+ K P + RLP +I V T+YFH+V TA+N +++WG HP + S ++ + + P ES L+ N K++Q++CG+ H LT VY +G NV GQLG+G++ +E IPV + +F+S G M+ +N +++VWGR Sbjct: 818 ICLPSRVETLHMLQIKVTSVSCGGKHTIVLTQQG-VYGWGSSVYGQIGVGTR-------------HTYTRPMLLQTLLDIGESVIAVDCGQYHTLAL-------TDAGCVYSWGWGVHGQLGLGDPEDQLIPKNI--DYLN-----EFGVVKISAGYCHSLFLTAKGDVYSCGCAYFGQLGIGDNSKRTTPVKIIRLPEVIIAVSTRYFHSVAITANNRVYSWGCHPYSLRFSAHNMRRARQQGQPMLDPLESFLCPILIDTSFVNGKLSQVACGSFHTVALTTDGEVYVWGRNVDGQLGIGHK------IEERIPVMLTKLNDKEFLSVRCGGEYTMA-VDNDYQVWVWGR 1134 HSP 2 Score: 95.5153 bits (236), Expect = 1.181e-15 Identity = 80/270 (29.63%), Postives = 130/270 (48.15%), Query Frame = 1 Query: 3214 IAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIE---LSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL---PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEIS--------IPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVE-VNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGHSL 3978 I AG H +I +N ++TWG G+LGHGD+ V K I + + I+ +S G H+++LT +G VY +G++ YGQ+GV T P L+ L +VI VD +HT+ T + +++WG W HG++ IP++I D L+ + +IS G CH+ LT K VY G +GQLG+G+ V+ + +P I VS+ ++A++ + +++ WG +SL Sbjct: 781 IGAGPEHGASI--------RNGDLYTWGLTRDGRLGHGDL----VGKNSICLPSRVETLHMLQIKVTSVSCGGKHTIVLTQQG-VYGWGSSVYGQIGVGTRHTYTRPMLLQTLLDIGESVIAVDCGQYHTLALTDAGCVYSWG-----W-------GVHGQLGLGDPEDQLIPKNI---DYLNEFGVVKISAGYCHSLFLTAKGDVYSCGCAYFGQLGIGDNSKRTTPVKIIRLPEVIIAVSTRYFHSVAITA---NNRVYSWGCHPYSL 1019 HSP 3 Score: 78.5666 bits (192), Expect = 1.667e-10 Identity = 63/301 (20.93%), Postives = 127/301 (42.19%), Query Frame = 1 Query: 160 TGNLYFIQQSLEDGSIKVKKLIWITDSKISAFSINPTCDWIVIAYRNGMLCILPIGTLMGRIQKKSEYWKPNDVTYLLDKLKSGTFITCMKWWTSYKKKNMCIIGRSDGDLLIIDLENGMTLIEETFPDYIYSIDLLITKDKTLSYCFITTKIQSQWKLLLEEIHEKKDITDSDIGYEFMDFSSYHSHNIINXXXXXXXXXXXQRNPSYLPSKLYQFPQSTFLKSQYVNGKCFLGAYDQISGIYKLFECDNLDSSIYEFQLPLSVVDICVTEDLLYLI--IEQVKRRSESNNKNAIFTEPQ 1056 + N ++ + S ++K++ W + I + +PT W+++ + I+P L+ + ++ W ND T + +G +T + WW + + + I G G++++IDL + + + +DL+ + + IT +QWKLLLE + S + M+ +S + + P K QF +S L Q G+ F+ A+ + +++F+ S + ++LP ++ T+ L++ I I + SN K I +E Q Sbjct: 52 SNNYLLLRHKTANKSPEIKQIPWPAEKTIISMCFDPTVVWLLVITDTPDIYIIPALCLLEPKSRVNQLWATNDATQITLNKPTG-MVTKVCWWHTLEDDQIAIYGTKAGEIVLIDLLRRRMVACTSIHGQVIDLDLIQDDQQMTTVLLITGNSGNQWKLLLE--------SRSQQNWRPMNETSLLGSERRLPSITNIMMNSDELKGMFTPVKFTQFDRSVILYPQNAKGRHFVTAHCDKTSTFQVFDSHLEHSPFFIYKLPFGTYNVIFTDCLMFAISSIHGQRLLVLSNQKAEISSEDQ 343
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. TrEMBL
Match: A0A2C9LW06 (Uncharacterized protein OS=Biomphalaria glabrata OX=6526 GN=106062150 PE=4 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.053e-34 Identity = 106/341 (31.09%), Postives = 173/341 (50.73%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGI-ENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHP-NIWQ--NSLNHEKSHGE----------ISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLF-------VWGR 3963 + ++ G H L LT+ G +Y G ++ GQ+G+ +H+ K+ PML+ L SD + +I G YHS A+ T + ++TWGWGVHGQLGHG+ +D + K + + N + ++++ G HS++LT G V+ FG +GQLG+ K+ P V LP AV + TK+FH + T +N+I+TWG+HP N+ Q +S+ + G S+ +S Y + +I ++ CG+ H+ +LT+ VY +G N+ GQLG G+R+D + +P S +D +A++ T F WG+ Sbjct: 149 VDAVACGCEHTLALTQQG-VYGWGNSKYGQVGVGTSHIYKR--------------PMLLET-LQSDT-VVAIDCGQYHSLAL-------TADHQIYTWGWGVHGQLGHGNPEDCLIPKHVTYLLNLA------VVQIAGGYAHSLVLTESGDVWSFGCGYFGQLGLGMNNKTTYPQKV-LLPTAVTAIGTKFFHCIAVTVTNKIYTWGLHPQNLRQIASSIRSARLAGSNDQDQNAFMFPSLVDSTYV-----HGQITKVCCGSLHSVLLTEDGSVYLWGRNLEGQLGTGSRQDER--------IPKMVTSINDQQIVAIASGGEFTLAFSSDGCIWAWGK 445 HSP 2 Score: 88.9669 bits (219), Expect = 4.539e-14 Identity = 72/254 (28.35%), Postives = 122/254 (48.03%), Query Frame = 1 Query: 3214 IAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIE-LSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHG---EISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWG 3960 IA G H I +N V+T G G+LG GDI + + + + ++ ++ GC H++ LT +G VY +GN+ YGQ+GV T P L++ L V+ +D +H++ TA ++I+TWG W ++ + HG + IP+ + L N + QI+ G H+ +LT+ V+ FG +GQLGLG +V +P + + + IA++ + K++ WG Sbjct: 98 IACGPKHCAVI--------RNGDVYTCGKSQGGRLGVGDIPQNACPPVRVENLHT----LQLKVDAVACGCEHTLALTQQG-VYGWGNSKYGQVGVGTSHIYKRPMLLETLQSDTVVAIDCGQYHSLALTADHQIYTWG-----W--GVHGQLGHGNPEDCLIPKHV---TYLLNLAVVQIAGGYAHSLVLTESGDVWSFGCGYFGQLGLGMNNKTTYPQKVLLPTAVTAIGTKFFHCIAVTVTN---KIYTWG 325
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. TrEMBL
Match: A0A0L8HNY5 (Uncharacterized protein (Fragment) OS=Octopus bimaculoides OX=37653 GN=OCBIM_22010053mg PE=4 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 6.707e-33 Identity = 108/335 (32.24%), Postives = 171/335 (51.04%), Query Frame = 1 Query: 2995 KEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIW-------QNSLNHEKSHG---EISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNI--PVPIDFVSSDDGITIAMSKSENSTKLFVWGR 3963 K + ++ G H L L+ G +YS G+++ GQ+G+ + + + + PML+ E S EC S+ G YHS A+ T + VFTWGWGVHGQLGHGD ++Q V K LI + + I+L+ G H+++L+ +G VY FG +GQLG+ QK VP+ + LP + ++ +F +V T + ++ WGIHPNI + + E + G + P + T ++L KI Q+SCG+ H +LT VY +G N GQLG + ++ +V V I V S +A++ + +++ WGR Sbjct: 833 KICVTSVTCGGEHILALSSQG-VYSWGSSKYGQVGVGAY----HHYYTR--------PMLV--ESLSSECCVSLVCGQYHSVAL-------TNDGKVFTWGWGVHGQLGHGDAENQSVPK-LISCLPTAKEIRT--IQLAAGYAHTMVLSQQGDVYSFGCGYFGQLGLGQRQKKSVPSHIT-LPEKISYIAANFFSSVAVTQDSSVYCWGIHPNIIRYAAQMSRRAPGQEAADGFGDDYLSPLLVDTSNVLG--KIVQVSCGSYHFVLLTSDGVVYTWGRNTDGQLGFVSYQNISFPTQVTAISDVHISHVYSGSDFNVALN---SDGEVWGWGR 1136 HSP 2 Score: 95.9005 bits (237), Expect = 7.019e-16 Identity = 72/301 (23.92%), Postives = 141/301 (46.84%), Query Frame = 1 Query: 106 FSDNFALLCIYQSSSSS------DTGNLYFIQQSLEDGSIKVKKLIWITDSKISAFSINPTCDWIVIAYRNGMLCILPIGTLMGRIQKKSEYWKPNDVTYLLDKLKSGTFITCMKWWTSYKKKNMCIIGRSDGDLLIIDLENGMTLIEETFPDYIYSIDLLITKDKTLSYCFITTKIQSQWKLLLEEIHEKKDITDSDIGYEFMDFSSYHSHNIINXXXXXXXXXXXQRNPSYLPSKLYQFPQSTFLKSQYVNGKCFLGAYDQISGIYKLFECDNLDSSIYEFQLPLSVVDICVTEDLLYL 990 F N A Q+ +S G+L I S+ K + L W+ I + +P+ W+++ + I+P +LM K WK +D T++ K G F + + WW + ++ I+G S G+L+ ++L L + YI +DL+ ++ + +T+K SQW+LLLE+++ + + ++ + S+ +++ + S + + + P Y P QF +S L QY G+ + A+ + Y++++C S +Y ++LPL + T+ L++L Sbjct: 23 FQPNIAQFAWRQARDTSLLALVCSNGHL-LIYWSVPGQRPKSRLLPWLEQRPIVSLCFDPSATWLLVITTQIDMFIIPALSLMDPQSKVDATWKRDDATHIRFKKPKG-FPSALCWWHTLTGYDVAIVGTSLGELVFVNLHTKRVLANTSIQSYIVKLDLIFDDEQVSRHLLVTSKKGSQWQLLLEKLNRSEWYQEIELVSKSSLLSADDTYSNVVSIIDRAAGYQDLFWPVYFP----QFGRSIQLSPQYAKGRQLVAAHCCRTCSYQIYDCSIQRSPLYIYKLPLGAHNTVFTDRLIFL 317 HSP 3 Score: 85.1149 bits (209), Expect = 1.639e-12 Identity = 61/238 (25.63%), Postives = 115/238 (48.32%), Query Frame = 1 Query: 3271 QNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPI---ELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLV-PNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEI---SIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWG 3960 +N ++TWG G LGHGD+ S+ + + + I ++ G H + L+++G VY +G++ YGQ+GV P LV+ L + + +H+V T ++FTWG W ++ + HG+ S+P+ I + Q++ G H +L+ + VY FG +GQLGLG R+ + +P I +++++ ++A+++ + ++ WG Sbjct: 794 RNGDLYTWGKSNSGCLGHGDL----TSEDTVMPVSRVETLHMLKICVTSVTCGGEHILALSSQG-VYSWGSSKYGQVGVGAYHHYYTRPMLVESLSSECCVSLVCGQYHSVALTNDGKVFTWG-----W--GVHGQLGHGDAENQSVPKLISCLPTAKEIRTIQLAAGYAHTMVLSQQGDVYSFGCGYFGQLGLGQRQKKSVPSHITLPEKISYIAANFFSSVAVTQ---DSSVYCWG 1016
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. TrEMBL
Match: A0A3S1B544 (Uncharacterized protein OS=Elysia chlorotica OX=188477 GN=EGW08_015955 PE=4 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 2.232e-32 Identity = 99/341 (29.03%), Postives = 171/341 (50.15%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGI-ENHVLKQNSFVNKNQCLSIIHPMLI-NIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVD-RLPPAVIHVDTKYFHTVCCTASNEIFTWGIHP-NIWQ--NSLNHEKSHG----------EISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENST-----KLFVWGR 3963 + ++ G H L LT+ G +Y G + GQ+G+ HV ++ PML+ ++L E + S+ G YHS A+ T++ V++WGWGVHGQLGHGD +D + + + + N ++++ G HS+ LT G V+ FG +GQLG+ T K+ +P + +I + T YFH + +A+N +F WG+HP N+ Q +S+ + G + S+ ++ Y + KI ++ CG+ H +L D +Y +G N+ GQLG G+R+D + IP + ++ +++A N + ++VWG+ Sbjct: 862 VEAVACGCEHTLALTQQG-VYGWGNSRYGQVGVGTRHVYRR--------------PMLVEGLQL---EVVVSVQCGHYHSLAL-------TEDHQVYSWGWGVHGQLGHGDPEDCLIPQHVRYLMNTG------VVKVAAGYAHSLALTESGQVWSFGCGYFGQLGLGTNSKTSIPERISFPTTSPMIAIGTNYFHGLAVSATNRVFQWGLHPHNLRQVASSMRMARHAGVHVSEQNHFLQPSLVDTTYV-----HGKITKLCCGSLHNVLLADDGVIYIWGRNLEGQLGTGSRQDER------IPKMLTCINDQQIVSVASGGEFNVSFDSEGGIWVWGK 1160 HSP 2 Score: 103.605 bits (257), Expect = 3.890e-18 Identity = 74/267 (27.72%), Postives = 129/267 (48.31%), Query Frame = 1 Query: 3214 IAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIE-LSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLP-PAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEIS---IPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMS-----KSENSTKLFVWGRCGHSLIQ 3984 +A G H+ AI +N ++TWG + G+LGHGD+ + + + + +E ++ GC H++ LT +G VY +GN+ YGQ+GV T P LV+ L V+ V ++H++ T +++++WG W ++ + HG+ IP+ + L N + +++ G H+ LT+ V+ FG +GQLGLG + +IP I F ++ I I + + ++F WG H+L Q Sbjct: 811 VACGPKHAAAI--------RNGDLYTWGRSLQGRLGHGDVPQAVCTPTRVETLHM----LKLRVEAVACGCEHTLALTQQG-VYGWGNSRYGQVGVGTRHVYRRPMLVEGLQLEVVVSVQCGHYHSLALTEDHQVYSWG-----W--GVHGQLGHGDPEDCLIPQHVR---YLMNTGVVKVAAGYAHSLALTESGQVWSFGCGYFGQLGLGTNS------KTSIPERISFPTTSPMIAIGTNYFHGLAVSATNRVFQWGLHPHNLRQ 1048 HSP 3 Score: 102.064 bits (253), Expect = 1.099e-17 Identity = 69/274 (25.18%), Postives = 134/274 (48.91%), Query Frame = 1 Query: 211 VKKLIWITDSKISAFSINPTCDWIVIAYRNG-MLCILPIGTLMGRIQKKSEYWKPNDVTYLLDKLKSGTFITCMKWWTSYKKKNMCIIGRSDGDLLIIDLENGMTLIEETFPDYIYSIDLLITKDKTLSYCFITTKIQSQWKLLLEEIHEKK----DITDSDIGYEFMDFSSYHSHNIINXXXXXXXXXXXQRNPS-YLPSKLYQFPQSTFLKSQYVNGKCFLGAYDQISGIYKLFECDNLDSSIYEFQLPLSVVDICVTEDLLYLIIEQVKRR 1014 +K++ W+ D +I++ +PT W++I + + ILP +++ ++ +K DVT K+ SG +TC WW + + + IIG G++L+IDLE + T I I L + + ITT +QW++LLE D+ +++GY+ +D S +I++ + + N S + PS+ F T L QY G+ F+ A+ +S ++ + D S ++ ++LP ++ +T+ L++ ++ + R Sbjct: 65 IKQVSWLPDKRIASMCFDPTLTWLLIVTESSNEIYILPALSIVNPNAVVNQIFKTEDVTVRSFKMTSG-HVTCAVWWQTLDGRQVAIIGTKVGEILLIDLEKEEEPRKVTIDVTITDISLSQDDQQINTTLLITTVTGNQWRMLLESRTSASTFFPDLYLNEMGYDNIDGRSIPPRSILD---------ETEENSSLFSPSQFANFQPPTVLWPQYARGRHFITAHCTVSSTLQVLDSDAEHSPLFVYKLPGGARNVILTDKLIFTMLSDSRER 328
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. TrEMBL
Match: A0A210PZT6 (Ultraviolet-B receptor UVR8 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT11029 PE=4 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 9.878e-32 Identity = 94/291 (32.30%), Postives = 154/291 (52.92%), Query Frame = 1 Query: 3013 ISLGKNHALILTESGSLYSAGTNECGQLGI-ENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHP---NIWQNSLNHEKSHGEIS--------IPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNK 3849 ++ G H L LT+ G +++ G+++ GQ+GI H+ + PM +N +L+S +C+ S+ G YHS A+ V + V++WGWGVHGQLGHG I+D V + + S ++ I + G H+V L+++G VY FG +GQLG+ T +K +P + L V+ V TK+FH + T SN +F+WG HP +S+ + G + +P+ + T + +I Q CG+ H++++T VY +G N+ GQ+G R+D K Sbjct: 850 VACGGEHTLALTQQG-VFAWGSSQYGQVGIGTRHIYSR--------------PMQVN-KLSSVQCV-SVETGQYHSLALTV-------DGEVYSWGWGVHGQLGHGSIEDALVPSHV-----QALSDKQI-IRVCGGYCHTVALSSEGEVYSFGCGFFGQLGLATNKKQTLPVRIHALKGKVVLVSTKFFHNIAVTQSNHVFSWGCHPFNLRFAAHSIRKARQAGAVVGDPVDHFLLPDLVDT--CFVHGRITQAVCGSSHSALVTLDGDVYTWGRNMDGQIGNNTRQDMK 1108 HSP 2 Score: 112.464 bits (280), Expect = 7.785e-21 Identity = 69/261 (26.44%), Postives = 123/261 (47.13%), Query Frame = 1 Query: 217 KLIWITDSKISAFSINPTCDWIVIAYRNGMLCILPIGTLMGRIQKKSEYWKPNDVTYLLDKLKSGTFITCMKWWTSYKKKNMCIIGRSDGDLLIIDLENGMTLIEETFPDYIYSIDLLITKDKTLSYCFITTKIQSQWKLLLE-EIHEKKDITDS---DIGYEFMDFSSYHSHNIINXXXXXXXXXXXQRNPSYLPSKLYQFPQSTFLKSQYVNGKCFLGAYDQISGIYKLFECDNLDSSIYEFQLPLSVVDICVTEDLLY 987 +L W D IS+ +PT W+++ + L I+P +M K ++ W+ +DVT K G T + WW + + + IIG G+++ +DL TL + I ID++ + + IT + QWKLLLE HE + D D+GY +D N + Q +LP + YQF +S FL QY G+ F+ A+ + Y++++ D + ++ ++LP ++ +T+ +++ Sbjct: 64 QLPWPQDKPISSMCFDPTVTWLLVLAEDATLFIIPALPIMDPTAKVNQLWREDDVTITKVKRPKGV-PTALLWWHTLDDRQIAIIGTKIGEIIFVDLVTRKTLYDINCDCKIMQIDIVEDDQQMTTNLLITDQSGVQWKLLLESRTHEILSLPDKELLDLGYNTVDGR--------NLPIISITTPSDQTRDLFLPLRFYQFQRSVFLSPQYAKGRHFVAAHCDKTNTYQIYDSDVEHNPLFVYKLPFGAYNVILTDKVIF 315 HSP 3 Score: 92.0485 bits (227), Expect = 1.185e-14 Identity = 69/236 (29.24%), Postives = 120/236 (50.85%), Query Frame = 1 Query: 3271 QNSHVFTWGWGVHGQLGHGDI-DDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPA-VIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEIS---IPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVN-IPVPIDFVSSDDGITIAMSKSENSTKLFVWG 3960 +N ++TWG HG+LGHGD+ D VS + + Q I ++ G H++ LT +G V+ +G++ YGQ+G+ T P V++L + V+T +H++ T E+++WG W ++ + HG I +P + LS+++I ++ G CH L+ + VY FG +GQLGL K V ++ + + VS+ IA+++S + +F WG Sbjct: 805 RNGDLYTWGRTSHGRLGHGDLAPDNTVSPPCRVETLH--MLQVRVISVACGGEHTLALTQQG-VFAWGSSQYGQVGIGTRHIYSRPMQVNKLSSVQCVSVETGQYHSLALTVDGEVYSWG-----W--GVHGQLGHGSIEDALVPSHVQA---LSDKQIIRVCGGYCHTVALSSEGEVYSFGCGFFGQLGLATNKKQTLPVRIHALKGKVVLVSTKFFHNIAVTQSNH---VFSWG 1024
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Cavefish
Match: herc3 (HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:NCBI gene;Acc:103047299]) HSP 1 Score: 103.605 bits (257), Expect = 1.209e-21 Identity = 94/343 (27.41%), Postives = 143/343 (41.69%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLI---------------------------FDFNNSGSGQ--------------------EFPI-ELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHA-SILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPI 3882 +++++ H+L L GS+YS G+N GQLG E K P L+ + L++ + I +A GD HS A+ + VF WG G GQLG G +++ RLI F + + SGQ P+ ++S G HS L+ G V+ +G NS GQLG+ Q VP + L V+++ HT T +FT+G N + L H+ ++ E +P + L +++QI CG H + + VY FG N GQLGL NR + + IP+P+ Sbjct: 35 LKEVACRGQHSLFLLHDGSVYSCGSNSHGQLGHEKPGNK---------------PELV-VALDAQK-IAGVACGDAHSLAV-------NEQGQVFAWGTGEKGQLGLGTVEEAVRVPRLIKKLCEHRISQVMCGNQHCIALAKDGQLFTWGQNSSGQLGLGKGEPSSLSPQPLKSLCGIPLAQISAGGDHSFALSLSGAVFGWGRNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFG---NGSRGQLGHDSTNNE-PLPRRVLE---LMGTEVSQIVCGKHHTLAFVPSTGLVYAFGCNAHGQLGLANRGNAR------IPLPV 340 HSP 2 Score: 70.8626 bits (172), Expect = 1.168e-11 Identity = 52/186 (27.96%), Postives = 93/186 (50.00%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSV-ILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVI 3558 + QIS G +H+ L+ SG+++ G N GQLG+ + +Q+ V P I L S + ++ I+ GD H+ A+ T++ +FT+G G GQLGH +++ + +R++ S ++ G H++ + + G VY FG N++GQLG+ + +P V + P + Sbjct: 191 LAQISAGGDHSFALSLSGAVFGWGRNSAGQLGLND---EQDRAV----------PCHIKF-LRSQKVVY-ISCGDEHTAAL-------TKDGGLFTFGNGSRGQLGHDSTNNEPLPRRVLELMGTEVS------QIVCGKHHTLAFVPSTGLVYAFGCNAHGQLGLANRGNARIPLPVRNIQPPYL 348 HSP 3 Score: 69.707 bits (169), Expect = 2.936e-11 Identity = 64/231 (27.71%), Postives = 99/231 (42.86%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIH-VDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKD---NKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGR 3963 + WG GQLG GD + R F SG G + E++ HS+ L + G VY G+NS+GQLG + + P LV L I V H++ ++F WG + L + +P I L +I+Q+ CG H L ++ +G N GQLGLG + + ++ +P+ +S+ + A+S S +F WGR Sbjct: 1 MLCWGSSAWGQLGLGDAEPVVAEPRSCRMF--SGRGLK---EVACRGQHSLFLLHDGSVYSCGSNSHGQLGHE--KPGNKPELVVALDAQKIAGVACGDAHSLAVNEQGQVFAWGTGE---KGQLGLGTVEEAVRVPRLIKK---LCEHRISQVMCGNQHCIALAKDGQLFTWGQNSSGQLGLGKGEPSSLSPQPLKSLCGIPLAQISAGGDHSFALSL---SGAVFGWGR 215 HSP 4 Score: 64.6994 bits (156), Expect = 8.726e-10 Identity = 62/243 (25.51%), Postives = 106/243 (43.62%), Query Frame = 1 Query: 3271 QNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL-VPNLVDRLPPAVI-HVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISI----PESIYTGDL--LSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENST-----KLFVWG 3960 + V++ G HGQLGH ++ L+ + Q+ ++ G HS+ + +G V+ +G GQLG+ T+++++ VP L+ +L I V H + ++FTWG + S G++ + P S+ L L +AQIS G H+ L+ V+ +G N GQLGL + +D +P I F+ S + I+ + LF +G Sbjct: 50 HDGSVYSCGSNSHGQLGHEKPGNK---PELVVALD----AQKI-AGVACGDAHSLAVNEQGQVFAWGTGEKGQLGLGTVEEAVRVPRLIKKLCEHRISQVMCGNQHCIALAKDGQLFTWG------------QNSSGQLGLGKGEPSSLSPQPLKSLCGIPLAQISAGGDHSFALSLSGAVFGWGRNSAGQLGLNDEQDRA------VPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFG 266
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Cavefish
Match: herc3 (HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:NCBI gene;Acc:103047299]) HSP 1 Score: 103.605 bits (257), Expect = 1.242e-21 Identity = 98/355 (27.61%), Postives = 149/355 (41.97%), Query Frame = 1 Query: 2974 PKSIE--SGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLI---------------------------FDFNNSGSGQ--------------------EFPI-ELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHA-SILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPI 3882 P+S SG+ + ++++ H+L L GS+YS G+N GQLG E K P L+ + L++ + I +A GD HS A+ + VF WG G GQLG G +++ RLI F + + SGQ P+ ++S G HS L+ G V+ +G NS GQLG+ Q VP + L V+++ HT T +FT+G N + L H+ ++ E +P + L +++QI CG H + + VY FG N GQLGL NR + + IP+P+ Sbjct: 24 PRSCRMFSGRGL-KEVACRGQHSLFLLHDGSVYSCGSNSHGQLGHEKPGNK---------------PELV-VALDAQK-IAGVACGDAHSLAV-------NEQGQVFAWGTGEKGQLGLGTVEEAVRVPRLIKKLCEHRISQVMCGNQHCIALAKDGQLFTWGQNSSGQLGLGKGEPSSLSPQPLKSLCGIPLAQISAGGDHSFALSLSGAVFGWGRNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFG---NGSRGQLGHDSTNNE-PLPRRVLE---LMGTEVSQIVCGKHHTLAFVPSTGLVYAFGCNAHGQLGLANRGNAR------IPLPV 340 HSP 2 Score: 69.707 bits (169), Expect = 2.962e-11 Identity = 63/231 (27.27%), Postives = 99/231 (42.86%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKD---NKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGR 3963 + WG GQLG GD + R F SG G + E++ HS+ L + G VY G+NS+GQLG + + P LV L + V H++ ++F WG + L + +P I L +I+Q+ CG H L ++ +G N GQLGLG + + ++ +P+ +S+ + A+S S +F WGR Sbjct: 1 MLCWGSSAWGQLGLGDAEPVVAEPRSCRMF--SGRGLK---EVACRGQHSLFLLHDGSVYSCGSNSHGQLGHE--KPGNKPELVVALDAQKIAGVACGDAHSLAVNEQGQVFAWGTGE---KGQLGLGTVEEAVRVPRLIKK---LCEHRISQVMCGNQHCIALAKDGQLFTWGQNSSGQLGLGKGEPSSLSPQPLKSLCGIPLAQISAGGDHSFALSL---SGAVFGWGR 215 HSP 3 Score: 64.6994 bits (156), Expect = 9.760e-10 Identity = 62/243 (25.51%), Postives = 106/243 (43.62%), Query Frame = 1 Query: 3271 QNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL-VPNLVDRLPPAVI-HVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISI----PESIYTGDL--LSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENST-----KLFVWG 3960 + V++ G HGQLGH ++ L+ + Q+ ++ G HS+ + +G V+ +G GQLG+ T+++++ VP L+ +L I V H + ++FTWG + S G++ + P S+ L L +AQIS G H+ L+ V+ +G N GQLGL + +D +P I F+ S + I+ + LF +G Sbjct: 50 HDGSVYSCGSNSHGQLGHEKPGNK---PELVVALD----AQKI-AGVACGDAHSLAVNEQGQVFAWGTGEKGQLGLGTVEEAVRVPRLIKKLCEHRISQVMCGNQHCIALAKDGQLFTWG------------QNSSGQLGLGKGEPSSLSPQPLKSLCGIPLAQISAGGDHSFALSLSGAVFGWGRNSAGQLGLNDEQDRA------VPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFG 266
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Cavefish
Match: herc3 (HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:NCBI gene;Acc:103047299]) HSP 1 Score: 102.834 bits (255), Expect = 1.627e-21 Identity = 98/355 (27.61%), Postives = 149/355 (41.97%), Query Frame = 1 Query: 2974 PKSIE--SGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLI---------------------------FDFNNSGSGQ--------------------EFPI-ELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHA-SILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPI 3882 P+S SG+ + ++++ H+L L GS+YS G+N GQLG E K P L+ + L++ + I +A GD HS A+ + VF WG G GQLG G +++ RLI F + + SGQ P+ ++S G HS L+ G V+ +G NS GQLG+ Q VP + L V+++ HT T +FT+G N + L H+ ++ E +P + L +++QI CG H + + VY FG N GQLGL NR + + IP+P+ Sbjct: 24 PRSCRMFSGRGL-KEVACRGQHSLFLLHDGSVYSCGSNSHGQLGHEKPGNK---------------PELV-VALDAQK-IAGVACGDAHSLAV-------NEQGQVFAWGTGEKGQLGLGTVEEAVRVPRLIKKLCEHRISQVMCGNQHCIALAKDGQLFTWGQNSSGQLGLGKGEPSSLSPQPLKSLCGIPLAQISAGGDHSFALSLSGAVFGWGRNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFG---NGSRGQLGHDSTNNE-PLPRRVLE---LMGTEVSQIVCGKHHTLAFVPSTGLVYAFGCNAHGQLGLANRGNAR------IPLPV 340 HSP 2 Score: 70.8626 bits (172), Expect = 1.099e-11 Identity = 54/196 (27.55%), Postives = 95/196 (48.47%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSV-ILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTV 3588 + QIS G +H+ L+ SG+++ G N GQLG+ + +Q+ V P I L S + ++ I+ GD H+ A+ T++ +FT+G G GQLGH +++ + +R++ S ++ G H++ + + G VY FG N++GQLG+ + +P V + P + H V Sbjct: 191 LAQISAGGDHSFALSLSGAVFGWGRNSAGQLGLND---EQDRAV----------PCHIKF-LRSQKVVY-ISCGDEHTAAL-------TKDGGLFTFGNGSRGQLGHDSTNNEPLPRRVLELMGTEVS------QIVCGKHHTLAFVPSTGLVYAFGCNAHGQLGLANRGNARIPLPVRNIQPPYLSSSQTSGHDV 358 HSP 3 Score: 68.9366 bits (167), Expect = 3.817e-11 Identity = 63/231 (27.27%), Postives = 99/231 (42.86%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKD---NKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGR 3963 + WG GQLG GD + R F SG G + E++ HS+ L + G VY G+NS+GQLG + + P LV L + V H++ ++F WG + L + +P I L +I+Q+ CG H L ++ +G N GQLGLG + + ++ +P+ +S+ + A+S S +F WGR Sbjct: 1 MLCWGSSAWGQLGLGDAEPVVAEPRSCRMF--SGRGLK---EVACRGQHSLFLLHDGSVYSCGSNSHGQLGHE--KPGNKPELVVALDAQKIAGVACGDAHSLAVNEQGQVFAWGTGE---KGQLGLGTVEEAVRVPRLIKK---LCEHRISQVMCGNQHCIALAKDGQLFTWGQNSSGQLGLGKGEPSSLSPQPLKSLCGIPLAQISAGGDHSFALSL---SGAVFGWGR 215 HSP 4 Score: 63.929 bits (154), Expect = 1.350e-9 Identity = 62/243 (25.51%), Postives = 106/243 (43.62%), Query Frame = 1 Query: 3271 QNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL-VPNLVDRLPPAVI-HVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISI----PESIYTGDL--LSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENST-----KLFVWG 3960 + V++ G HGQLGH ++ L+ + Q+ ++ G HS+ + +G V+ +G GQLG+ T+++++ VP L+ +L I V H + ++FTWG + S G++ + P S+ L L +AQIS G H+ L+ V+ +G N GQLGL + +D +P I F+ S + I+ + LF +G Sbjct: 50 HDGSVYSCGSNSHGQLGHEKPGNK---PELVVALD----AQKI-AGVACGDAHSLAVNEQGQVFAWGTGEKGQLGLGTVEEAVRVPRLIKKLCEHRISQVMCGNQHCIALAKDGQLFTWG------------QNSSGQLGLGKGEPSSLSPQPLKSLCGIPLAQISAGGDHSFALSLSGAVFGWGRNSAGQLGLNDEQDRA------VPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFG 266
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Cavefish
Match: RPGR (retinitis pigmentosa GTPase regulator [Source:HGNC Symbol;Acc:HGNC:10295]) HSP 1 Score: 96.2857 bits (238), Expect = 1.523e-19 Identity = 80/281 (28.47%), Postives = 124/281 (44.13%), Query Frame = 1 Query: 2998 EIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQT--LQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGN 3834 E +R + G NH L+ T G +++AG N GQLG+ H ++ SF +HP L ++AG S A+ T++ +F WG GQLG G + K L D + +G +S G HS ++T+ G VY FG + G+LG+ L P V L V+ V HT+ T NE++ +G H Q L + P + ++ ++CG H +++TD +Y FG +G+LGLG+ Sbjct: 115 ERVRFTACGTNHTLVSTSRGEIFAAGRNSEGQLGL-GHCEERTSFQQ-------LHPFCDGAPLKQ------LSAGCNTSAAL-------TEDGRLFMWGDNSVGQLGLGSENLVLFPKLLKVDRSVTG--------ISCGLNHSALITDIGDVYTFGEAADGRLGLSADQLANHRQPQRVGSLE-GVLQVSCGGTHTLALT-ENELYAFG-HGEFGQLGLGTFDFQADSPAPVGHF-----RKGRVTHVTCGENHTALITDGGLLYTFGDGRYGKLGLGD 358 HSP 2 Score: 88.5817 bits (218), Expect = 3.256e-17 Identity = 91/329 (27.66%), Postives = 143/329 (43.47%), Query Frame = 1 Query: 3013 ISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPI-ELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNL--VDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQK----------IAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWG 3960 IS G +H+ +TE G L+ G+N GQLG+E+ I P+ + L + F+ A G H+ +VSTS +F G GQLG G +++ S + + F + P+ +LS GC S LT G ++ +G+NS GQLG+ + L P L VDR +V + H+ T +++T+G E + G + + + D L+N + + Q+SCG H LT+ + +Y FG +GQLGLG + + P P+ G ++ EN T L G Sbjct: 68 ISCGHSHSAFVTEHGRLFVFGSNSSGQLGLESKG-------------PITKPVCVKA-LKHERVRFT-ACGTNHT---LVSTSR----GEIFAAGRNSEGQLGLGHCEER-TSFQQLHPFCDGA-----PLKQLSAGCNTSAALTEDGRLFMWGDNSVGQLGLGSENLVLFPKLLKVDR---SVTGISCGLNHSALITDIGDVYTFG------------EAADGRLGL-----SADQLANHRQPQRVGSLEGVLQVSCGGTHTLALTENE-LYAFGHGEFGQLGLGTFD-----FQADSPAPVGHFRK--GRVTHVTCGENHTALITDG 340 HSP 3 Score: 53.5286 bits (127), Expect = 1.780e-6 Identity = 55/192 (28.65%), Postives = 81/192 (42.19%), Query Frame = 1 Query: 3262 HTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDT-KYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGN 3834 TT++ VFT+G I D SK F N + P+ +S G HS +T G ++ FG+NS GQLG+++ P V L + HT+ T+ EIF G + Q L H + G L Q+S G ++ LT+ ++ +G N GQLGLG+ Sbjct: 35 QTTESGAVFTFG--------KSQIADSVPSK---FWLKN-----DKPVLISCGHSHSAFVTEHGRLFVFGSNSSGQLGLESKGPITKPVCVKALKHERVRFTACGTNHTLVSTSRGEIFAAGRNSE-GQLGLGHCEERTSFQQLHPFCDGAPLK-----QLSAGCNTSAALTEDGRLFMWGDNSVGQLGLGS 204
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Cavefish
Match: herc4 (HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:NCBI gene;Acc:103028096]) HSP 1 Score: 93.2041 bits (230), Expect = 1.720e-18 Identity = 85/304 (27.96%), Postives = 137/304 (45.07%), Query Frame = 1 Query: 2932 LGFIKEKSNRILLLPK--SIESGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKS-LVPNLVDRL---PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLG 3825 LG I E+ I++ P+ S +GK ++ + G+ H + L G++Y+ G N+ GQLG E K V + + I +++ G+ H+ A+ VF WG GQLG +++D R I + + ++++ G HS+ L+ +G ++ +G N YGQLG+ S L P LV L P A I H+ T S +F WG + Q LN + + P + T L +Q++ I CG H + LT + V+ FG+ +GQLG Sbjct: 14 LGGIDEE---IVVEPRKCSFFNGK-LVWDVGCGRRHTVFLLGDGTVYTCGCNDLGQLGHEKTRKKPEQVVALDA-----------------QNIVAVSCGESHTLAL-------NDKGQVFAWGQASEGQLGLANMEDCVRVPRNIKSLS-----EVHIVQVTCGYRHSLALSRRGQIFSWGQNKYGQLGLGKEGPSVLTPQLVQSLLGIPFAQISAGGA--HSFGLTLSGAVFGWGRN-KFGQLGLN---DNSDRCAPCLLKT---LRSQRVVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275 HSP 2 Score: 81.2629 bits (199), Expect = 6.979e-15 Identity = 63/231 (27.27%), Postives = 103/231 (44.59%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPA-VIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDN---KNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGR 3963 + WG +GQLG G ID++ V + F N + ++ G H+V L G VY G N GQLG + +K P V L ++ V HT+ ++F WG + L + +P +I + LS I Q++CG H+ L+ + ++ +G N +GQLGLG + LV+ + +P +S+ + ++ S +F WGR Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVVEPRKCSFFNG----KLVWDVGCGRRHTVFLLGDGTVYTCGCNDLGQLGHEKTRKK--PEQVVALDAQNIVAVSCGESHTLALNDKGQVFAWG---QASEGQLGLANMEDCVRVPRNIKS---LSEVHIVQVTCGYRHSLALSRRGQIFSWGQNKYGQLGLGKEGPSVLTPQLVQSLLGIPFAQISAGGAHSFGLTL---SGAVFGWGR 216 HSP 3 Score: 68.1662 bits (165), Expect = 6.827e-11 Identity = 64/233 (27.47%), Postives = 103/233 (44.21%), Query Frame = 1 Query: 2971 LPKSIESGKEI-IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFV--------SKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVI-HVDTKYFHTVC-CTASNEIFTWGIHPN 3636 +P++I+S E+ I Q++ G H+L L+ G ++S G N+ GQLG+ + S++ P L+ L I+AG HS + +S + VF WG GQLG D D+ S+R+++ + G H+ LT +G V+ FG YGQLG T + P V L V+ + HT+ +S +I ++G+ N Sbjct: 127 VPRNIKSLSEVHIVQVTCGYRHSLALSRRGQIFSWGQNKYGQLGL------------GKEGPSVLTPQLVQSLLGIP--FAQISAGGAHSFGLTLSGA-------VFGWGRNKFGQLGLNDNSDRCAPCLLKTLRSQRVVY--------------ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNTTNHEINPRKVFELMGNVVTQISCGRQHTMAFIPSSGKIDSFGLGGN 324 HSP 4 Score: 65.0846 bits (157), Expect = 6.823e-10 Identity = 62/243 (25.51%), Postives = 108/243 (44.44%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL-VPNLVDRLPPA-VIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDN--KNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGHSLIQEHIKN 3999 V+T G GQLGH + + + D N + +S G H++ L +KG V+ +G S GQLG+ ++ + VP + L ++ V Y H++ + +IF+WG + L K + P+ + + L AQIS G H+ LT V+ +G N +GQLGL + D L++ + ++ + T A++K +F +G G+ + + N Sbjct: 55 VYTCGCNDLGQLGHEKTRKK-PEQVVALDAQNI-------VAVSCGESHTLALNDKGQVFAWGQASEGQLGLANMEDCVRVPRNIKSLSEVHIVQVTCGYRHSLALSRRGQIFSWGQNK---YGQLGLGKEGPSVLTPQLVQS---LLGIPFAQISAGGAHSFGLTLSGAVFGWGRNKFGQLGLNDNSDRCAPCLLKTLRSQRVVYICCGEDHTAALTKEGG---VFTFGAGGYGQLGHNTTN 280 HSP 5 Score: 60.077 bits (144), Expect = 2.508e-8 Identity = 58/200 (29.00%), Postives = 87/200 (43.50%), Query Frame = 1 Query: 3463 CFGNNSYGQLGVQTLQKSLV--PNLVDRLPPAVI-HVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDN-------KNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGHSLIQEHIKNPVSDTLKPQLL 4032 C+GN SYGQLG+ + + +V P ++ V HTV ++T G + L HEK+ + PE + L Q I +SCG H L DK V+ +G GQLGL N +D K+L EV+I V G +++ S ++F WG+ + + + P L PQL+ Sbjct: 3 CWGNASYGQLGLGGIDEEIVVEPRKCSFFNGKLVWDVGCGRRHTVFLLGDGTVYTCGCND---LGQLGHEKTRKK---PEQVVA---LDAQNIVAVSCGESHTLALNDKGQVFAWGQASEGQLGLANMEDCVRVPRNIKSLSEVHI------VQVTCGYRHSLALSRRG-QIFSWGQNKYGQLGLGKEGP--SVLTPQLV 184
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001275.1 (pep scaffold:Pmarinus_7.0:GL476529:184068:212443:-1 gene:ENSPMAG00000001140.1 transcript:ENSPMAT00000001275.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 82.4185 bits (202), Expect = 7.514e-16 Identity = 74/285 (25.96%), Postives = 128/285 (44.91%), Query Frame = 1 Query: 2995 KEIIRQISLGKN---HALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKG-FVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIH-VDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGN 3834 + +++IS + H L +T G ++S G + G+LG NS K +P LI L + + ++AG HS ++ T++ ++TWG G G+LGHGD + + + L+ D +N G +++ G H++ ++ G V+ FG G+LG + P +++ L I V ++ T++ +++ WG L S P+ I + L+ +I ISCG H LT VY +G+N GQ G G+ Sbjct: 461 QRAVKKISSSRGSDGHTLAVTMEGEVFSWGDGDYGKLG------HGNSSTQK-------YPKLIQGPLQG-KVVVCVSAGYRHSASV-------TEDGELYTWGEGDFGRLGHGDSNSRNIPT-LVKDISNVG-------QVACGSSHTIAVSQDGRIVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQLYAWGC-----GACLGCGSSEATALRPKLI---EDLACTRIVDISCGDSHCLALTHDNEVYAWGNNSMGQCGQGH 708
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Sea Lamprey
Match: rcc2 (regulator of chromosome condensation 2 [Source:NCBI gene;Acc:406455]) HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-13 Identity = 75/317 (23.66%), Postives = 134/317 (42.27%), Query Frame = 1 Query: 2971 LPKSIESGKE-IIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFV-------------SKRLIFDFNNSGSGQEFPI------ELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLV---DRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKN 3852 +P+ I++ KE +I + G++H L LT++G++Y+ G N GQLG+ NQ ++ P I + S + +A G S I + ++F++G +GQLGH + D +++ +RL + GQ + +++ G H++ L +G V+ +G YG+LG + L+P LV DR PAV V Y T ++ WG + S P++++ L + ++CG I +D+ + +G+LG G K + Sbjct: 96 VPRIIDTLKECVIVDGACGRSHTLCLTDTGTVYAFGENRLGQLGL------------GNQTDAVPSPTQI---VYSGRQVVKVACGAEFSVFIDC-------DGNLFSFGCPEYGQLGH-NTDGRYIVRAQRIEFVCELAPRRLARFIEKTRDGQVLTVRGVVVRDVACGANHTIALDTRGRVFTWGFGGYGRLGHAEQKDELLPRLVKLLDRPAPAVNSVRAGYSCTFAINVVGTLYFWG----------STNTSRDPTMYPKAVHD---LCGTHVRSLACGKSSILITSDESTMSWGPWPTYGELGYGEGKQRSS 376 HSP 2 Score: 53.5286 bits (127), Expect = 2.564e-7 Identity = 64/257 (24.90%), Postives = 105/257 (40.86%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCT-------ASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQ--------------------ISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDN--KNLVE-VNIPVP-IDFVSSDDGITIAMSKSENSTKLFVWG 3960 V++WG G GQLGHGD V R+I ++ + G H++ LT+ G VY FG N GQLG+ Q VP+ P +++ + C +F++G P Q L H I + I L+ +++A+ ++CG H L + V+ +G +G+LG +KD LV+ ++ P P ++ V + T A++ L+ WG Sbjct: 75 VYSWGRGEKGQLGHGDTCRVDV-PRIIDTLKEC-----VIVDGACGRSHTLCLTDTGTVYAFGENRLGQLGLGN-QTDAVPS-----PTQIVYSGRQVVKVACGAEFSVFIDCDGNLFSFGC-PEYGQ--LGHNTDGRYIVRAQRIEFVCELAPRRLARFIEKTRDGQVLTVRGVVVRDVACGANHTIALDTRGRVFTWGFGGYGRLGHAEQKDELLPRLVKLLDRPAPAVNSVRAGYSCTFAINVVGT---LYFWG 313 HSP 3 Score: 50.8322 bits (120), Expect = 1.941e-6 Identity = 41/157 (26.11%), Postives = 76/157 (48.41%), Query Frame = 1 Query: 3427 HSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTK--YFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFV 3891 HS++++ +G VY +G GQLG + VP ++D L VI VD HT+C T + ++ +G + + Q L ++ + P I + S +++ +++CG + + ++ FG +GQ LG+ D + +V I+FV Sbjct: 65 HSLLISTRGLVYSWGRGEKGQLGHGDTCRVDVPRIIDTLKECVI-VDGACGRSHTLCLTDTGTVYAFGEN-RLGQLGLGNQTD--AVPSPTQI----VYSGRQVVKVACGAEFSVFIDCDGNLFSFGCPEYGQ--LGHNTDGRYIVRAQ---RIEFV 208
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Sea Lamprey
Match: NEK9 (NIMA related kinase 9 [Source:HGNC Symbol;Acc:HGNC:18591]) HSP 1 Score: 74.7146 bits (182), Expect = 1.420e-13 Identity = 84/350 (24.00%), Postives = 141/350 (40.29%), Query Frame = 1 Query: 2926 KLLGFIKEKSNRILLLPKSIESGKEI-IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLIN-IELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVP---IDFVSSDDGITIAMSKSENSTKLFVWG 3960 K++G + K PK ++ + +RQ++ G + LTE G ++S G++ G +G N + ++ PM + +N + I+ GD H A+ T++ V+ WG G +G+LG +F KR+ S + E+ G + LT +G V GNN + +LG+ L + +T FH V + P + + LS KI IS G H++++ + FG N GQLG G+ K + +V P+ I VS DG TIA ++++N ++ WG Sbjct: 382 KMVGQLGHKDKASYRQPKRVDKLLGLAVRQVACGDEFTVCLTEQGEVFSFGSDYYGCMG-----------CNGELGVEVLEPMPVQFFNINP---VTQISCGDCHVMAL-------TRSGAVYAWGCGEYGRLGLETDATEFYPKRVPL------SNRWKITEVCCGTDGTFFLTAQGKVLACGNNEFNKLGLNQCTSGLR------------NRETSVFHEVIMK---------LMPTLVKQ----------------------LSIYKIRSISGGKTHSAVIDVCGRLLTFGHNKHGQLGTGDFKKHLGIVLHKGPLVGKLITMVSCGDGFTIAATEADN--HIYAWG 659
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Sea Lamprey
Match: rcc1l (RCC1 like [Source:ZFIN;Acc:ZDB-GENE-060526-370]) HSP 1 Score: 70.8626 bits (172), Expect = 8.880e-13 Identity = 79/352 (22.44%), Postives = 151/352 (42.90%), Query Frame = 1 Query: 2932 LGFIKEKSNRI-----LLLPKSI-----ESGKEIIRQISLGKNHALILTES-GSLYSAGTN---ECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLP-PAVIHVDTKYFHTVCCTASNE---IFTWGIHPNIWQNSLNHEKSHGEISIPESIYT-GDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKS 3930 +GF + +S+R +L P + E + + Q++ G+ H+L+LT++ G+++S G N +CG++ IE+ V K + ++K + I ++ + D +F T+ ++ GWG GQ G G + KRL D SG+ S G F + ++ G ++ +GN+ Y QL T ++ N+ +P V V C NE +F WG I ++ IP S++ + + ++ + CG H + + + ++ +G N+ G LG+G D V + + V+ ++A++K+ Sbjct: 104 IGFHRSRSDRTKSYDYILEPSPVPLPLVEHQQTRVLQVACGRAHSLVLTDNEGAVFSMGNNAYGQCGRVIIEDEVYKGSRLIHK---IEGIEGKVVEVVCGQDHSLFR------------------TEKGELYACGWGADGQTGLGSYEMCSTPKRLGGDL----SGEPVAQVASYGDF-CLAVSESGELFGWGNSEYRQLAAIT--DAVQINVPKHIPLKNVGKVKMAAAGGTICGILNEEGEVFVWGY--GILGKGPRLSETETPEQIPPSLFGRTEFDPDIRVKTLRCGLHHFAAVNTRGELFSWGKNMRGCLGIGRPDDQYFPWRVTVAGEVVDVACGVDHSVALAKT 425
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001750.1 (pep scaffold:Pmarinus_7.0:GL481695:1137:12922:1 gene:ENSPMAG00000001576.1 transcript:ENSPMAT00000001750.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 71.2478 bits (173), Expect = 1.252e-12 Identity = 87/369 (23.58%), Postives = 145/369 (39.30%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSL--YSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLIN--IELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDD----QFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVC--CTASNEIFTWGIHPNIWQNSLNHEK-SHG-----------EISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDF--------VSSDDGITIAMSKSENSTKLFVW-----GRCGHSLIQEHIKNPV 4005 + Q+++G+ +T SG L + A G + V + P L++ +E S I ++ GD + + T + T+G G G LGHG D + V L ++ ++S G H + ++N+ V+ +G G+LG+ + L P V PP T + C T+S ++ G N N L +K SH E S+ S L ++ ++ GT H++ +TD Y FGSN GQLG G R ++ P P+D V+ D T+A+++ ++F W GR G + + + PV Sbjct: 256 VLQVAVGRTQRAGVTRSGRLIVWEASPGTVGDAALPGSV-------------GSVQPQLVSRFLEGQSGVTIQHVSCGDLFTACL-------TDRGILMTYGSGSSGCLGHGSYSDVAQPKIVEALLGYEIT----------QMSCGMSHVLAVSNEQEVFAWGRGDNGRLGLGNQELHLCPQPVAVPPP--YEPCTAHCGIDCSMVTSSGKLLACGS--NRRYNKLGLDKISHDGDDAACPAEQTEESLVLSPVQSSPLDGARVVHVALGTAHSAAVTDTGTCYTFGSNQHGQLGGGARTSSR------APQPVDGLGGVKVVQVTCGDAFTVAVAE---GGQVFTWGKAARGRLGRTDGEACVPGPV 581
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Yeast
Match: SRM1 (Nucleotide exchange factor for Gsp1p; localizes to the nucleus, required for nucleocytoplasmic trafficking of macromolecules; suppressor of the pheromone response pathway; potentially phosphorylated by Cdc28p; human homolog of the RAN GEF, RCC1, can complement a temperature sensitive point mutant [Source:SGD;Acc:S000003065]) HSP 1 Score: 53.9138 bits (128), Expect = 1.510e-7 Identity = 40/136 (29.41%), Postives = 70/136 (51.47%), Query Frame = 1 Query: 2935 GFIKEKSNRILLLPKSIESGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVN-KNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDD 3339 G + K R L LP ++ +IR I+ G++H+LIL++ G LYS G + ++GI L + ++ + + ++ P +LN+ S+AAG +HS A+ QN ++WG+G +G G +D Sbjct: 315 GALVTKPKR-LALPDNV-----VIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLP----TKLNNVPKFKSVAAGSHHSVAVA-------QNGIAYSWGFGETYAVGLGPFED 433
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Nematostella
Match: EDO45417 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RT81]) HSP 1 Score: 98.2117 bits (243), Expect = 1.343e-20 Identity = 94/328 (28.66%), Postives = 146/328 (44.51%), Query Frame = 1 Query: 3013 ISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIH-VDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDD---GITIAMSKSENSTKLFVWGR--CGHSL 3978 ++ G H L L G +YS G++E GQLG + P+ + EL+ +CI ++ G YHS A+ + + V++WGWGVHGQLG I+D + + S SG F +L+ G H+ +LT +G VY FG YGQLG+ T K +P LV L I+ + F TV ++ ++F WG P+ + + I CG H +T+ + V+ +G N GQLG D+ V + FV++ ++AM + + +++VWGR G SL Sbjct: 92 VACGIEHTLALCRDG-VYSWGSSEYGQLG-------------QGDTQQHTRPVYVT-ELSDKKCI-AVVCGHYHSLAL-------SADQQVYSWGWGVHGQLGLDSIEDALLPSHV-----TSLSGA-FVTQLAAGYSHTAVLTTEGKVYTFGGGLYGQLGLGTTSKQTLPQLVQALEKDRIYLICCGSFETVAVSSEQKLFNWGRSPHYF----------------------------RFHMIHCGNWHYLAVTEARQVFTWGFNDHGQLGHSTSMDHLLFPTVVQKLNESFVATASVGAEFSVAM---DATGQVWVWGRSDSGQSL 359 HSP 2 Score: 70.8626 bits (172), Expect = 3.705e-12 Identity = 69/258 (26.74%), Postives = 123/258 (47.67%), Query Frame = 1 Query: 3214 IAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLP-PAVIHVDTKYFHTVCCTASNEIFTWG--IHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGL--GNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGH 3972 ++ G +H+ + S V+TWG G+LGHGD+ ++ K + F + + ++ G H++ L G VY +G++ YGQLG Q+ P V L I V ++H++ +A ++++WG +H + +S+ + +P + + LS + Q++ G H ++LT + VY FG ++GQLGL +++ LV+ I + T+A+S + KLF WGR H Sbjct: 35 LSCGQHHTAVVSAS-------GDVYTWGKSHKGRLGHGDLIEE-EGKSMPFRVEILHMHRIKVLSVACGIEHTLALCRDG-VYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCIAVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIE------DALLPSHVTS---LSGAFVTQLAAGYSHTAVLTTEGKVYTFGGGLYGQLGLGTTSKQTLPQLVQALEKDRIYLICCGSFETVAVSSEQ---KLFNWGRSPH 271
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Nematostella
Match: EDO49099 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RI68]) HSP 1 Score: 96.2857 bits (238), Expect = 3.639e-20 Identity = 75/282 (26.60%), Postives = 130/282 (46.10%), Query Frame = 1 Query: 3163 HPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGC--FHSVIL---TNKGFVYCFGNNSYGQLGV--QTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLG--LGNRKDNKNL--VEVNIPVPIDF----VSSDDGITIAMSKSENSTKLFVWGR 3963 HP ++ L D I +A G H+ A+ +++ VF+WG G G+LG G + D+F R+ G E + C FHS + + +G ++ FG N YGQLG+ L S + + + V FH+ ++ WG + + + N+ + S+P + G+ L + + +++CG H++ +T K ++C G N +GQLG L + +D+ V V + VP DF V+ D T ++ + ++F WGR Sbjct: 230 HPHVVEALLGKD--IRKVACGATHTLAL-------SKDGEVFSWGSGYGGRLGQGHLRDRFTPIRIC--------GLESLNLTQVACNEFHSAAVCACSKQGALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLGNGNYTST----SLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVT---DGGEIFTWGR 487 HSP 2 Score: 63.929 bits (154), Expect = 4.105e-10 Identity = 68/309 (22.01%), Postives = 135/309 (43.69%), Query Frame = 1 Query: 2974 PKSIES--GKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSG-QEFPI-ELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLV----DRLPPAVIHVDTKYFHTVCCTASNEIFTWG--IHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNI 3870 P +E+ GK+I R+++ G H L L++ G ++S G+ G+LG Q ++ + I +N+ +A ++HS A+ ++ +F++G +GQLG +L+ + S E I ++ G FHS L G ++ +G N GQLG + +P+L+ D AV+ V H+ T +F G + + + +++ H ++ + + ++ + ++CG H +++TD ++ +G G+LG G+ + E+ I Sbjct: 231 PHVVEALLGKDI-RKVACGATHTLALSKDGEVFSWGSGYGGRLG-------QGHLRDRFTPIRICGLESLNLT--------QVACNEFHSAAVCA----CSKQGALFSFGENDYGQLG-------IPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVR---VPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKGGRLGHGDNLNRHLPTEIEI 509 HSP 3 Score: 62.3882 bits (150), Expect = 1.176e-9 Identity = 34/124 (27.42%), Postives = 61/124 (49.19%), Query Frame = 1 Query: 2971 LPKSIESGKEI----IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGD 3330 LP +E+G ++ + +++ G H+ +T+ G ++ G N GQLG + +N NQ + + + + + + +D +A GD H+ + T +FTWG G G+LGHGD Sbjct: 390 LPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLG---------AHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVV-------TDGGEIFTWGRGKGGRLGHGD 497
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Nematostella
Match: EDO34592 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SNX9]) HSP 1 Score: 96.6709 bits (239), Expect = 5.429e-20 Identity = 84/313 (26.84%), Postives = 135/313 (43.13%), Query Frame = 1 Query: 2914 RCQIKLLGFIKEKSNRILLLPKSIESGK--EIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDD---QFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL---VPNL-VDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLG 3825 +C LG + E + P+ +E+ + +R++S G NH L + G++Y+ G+NE GQLG ++ S N +I I + G H+ A+ + VF WG +GQ+G G Q + K L G + ++++ GC HS+ LT G ++C+G+NS GQLG+ S+ P L ++ +P +I H+ ++S +F WG +N H P L S Q + +SCG H ++LT V+ FG GQLG Sbjct: 6 KCSEGQLG-VGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCGSNEFGQLG------QEKSHTNPESVHAI-----------ETFTITKVTCGKAHTVAV-------SDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKML------KGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGA--HSFALSSSGALFGWG------KNEYGQLGVHDTTDRPLPTLLKSLRS-QGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLG 278 HSP 2 Score: 82.4185 bits (202), Expect = 1.140e-15 Identity = 71/254 (27.95%), Postives = 118/254 (46.46%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVS-KRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLG----NRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGR--CGHSLIQEHIKNPVSDTLK 4020 +F WG GQLG G+ + +F+S RL+ + S + +E +S G H+ L G VY G+N +GQLG + + P V + + V HTV + +F WG + + Q L + +IP+ + L+ + QI+CG H+ LT ++C+G N GQLG+G + + ++ +N VP +S+ + A+S +S LF WG+ G + + P+ LK Sbjct: 1 MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVRE----VSCGWNHTAFLCKDGTVYTCGSNEFGQLGQEKSHTN--PESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDN-SYGQIGLGSKVKEKVQTIPKMLKG---LAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLN-GVPFMLISAGGAHSFALS---SSGALFGWGKNEYGQLGVHDTTDRPLPTLLK 240 HSP 3 Score: 75.485 bits (184), Expect = 1.448e-13 Identity = 103/407 (25.31%), Postives = 166/407 (40.79%), Query Frame = 1 Query: 2920 QIKLLGFIKEKSNRILLLPKSIES-GKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVI-HVDTKYFHTVC-CTASNEIFTWG-------------------IHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKL---FVWGRCGHSLIQEHIKNPVSDTLKPQLLIEYQHVVDNHL 4065 QI L +KEK I PK ++ K + QI+ G NH++ LT SG L+ G N GQLGI + +S P+L LN + I+AG HS A+ S + +F WG +GQLG D D+ + L+ + G +S G H+ +LT+ G V+ FG + GQLG + P V L +V+ + HT+ +S ++T+G W S N + E +YT + +I G H + +G G + + +++++ +++PV +D V TIA S+ S KL F C + +++ +P + P L+ Y H + +HL Sbjct: 116 QIGLGSKVKEKVQTI---PKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGK----------THSSMSEPAPVL---SLNGVPFML-ISAGGAHSFALSSSGA-------LFGWGKNEYGQLGVHDTTDRPLPT-LLKSLRSQGV-----CYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLGVTNNCNSPMTAKGPWLRSNNIKSMLPEADGDSVVYT--------VRRIDAGGDHCFAMASS-----YGDETDGPEDMRLPRPSQSILHLSVPVTMDLVKR---ATIASDLSDVSEKLEIIFSSLACLNGSFLDNVVHPYVMPIHPCLIPLYVHFIHSHL 476
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Nematostella
Match: EDO45579 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RSK3]) HSP 1 Score: 90.8929 bits (224), Expect = 3.695e-18 Identity = 76/277 (27.44%), Postives = 126/277 (45.49%), Query Frame = 1 Query: 3031 HALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKG-FVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCC--------TASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGN 3834 H L LT G +YS G + G+LG N +Q I P L+ L ++ + IAAG HS A+ T++ ++TWG G +G+LGHGD + + V + + D N G +++ G H+V ++ G V+ FG+ G+LG + P +++ L VI VCC T++ +++ WG P++ S++ + ++ + L + + IS G H LT VY +G+N GQ G G+ Sbjct: 461 HTLALTLDGKVYSWGDGDYGKLGHGN-----------SQTQKI--PKLVEGALG-NKVVCCIAAGYRHSAAV-------TEDGELYTWGEGDYGRLGHGDNNSRNVPVQ-VKDVANVG-------QVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHSDTNRVYKPKVIEALQGMVI-------RKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDATSATPKLLLA--------LQSHSVVDISVGDSHCVALTQDNNVYAWGNNSMGQCGQGH 693 HSP 2 Score: 58.5362 bits (140), Expect = 2.579e-8 Identity = 65/247 (26.32%), Postives = 107/247 (43.32%), Query Frame = 1 Query: 3274 NSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGV-----QTLQKSLVPNLVDR-LPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVW-------GRCGHS 3975 N V+ WG QL G +D V K L F GS Q+ + G + + ++ GFV+ G SYG+LG+ QT K L N + L +V HT+ T ++++WG + L H S + IP+ + L N+ + I+ G H++ +T+ +Y +G +G+LG G+ V+V + V+ T+ +S+ + VW G+ GHS Sbjct: 363 NEEVYVWGSNSSHQLAEGSMDKILVPK-LATSF---GSAQQ----IEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRL--NFDNECLVKSVSSSKGSDGHTLALTLDGKVYSWG---DGDYGKLGHGNSQTQ-KIPKLVEGA--LGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYGRLGHGDNNSRNVPVQVKDVANVGQVACGSAHTVCVSQDGQT----VWSFGSGDNGKLGHS 589
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Nematostella
Match: EDO37196 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SGI6]) HSP 1 Score: 90.5077 bits (223), Expect = 6.699e-18 Identity = 84/309 (27.18%), Postives = 137/309 (44.34%), Query Frame = 1 Query: 2971 LPKSIES-GKEIIRQISL--GKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFP----IELSMGC--FHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLP-PAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVN 3867 +P+ IE+ ++R++S+ G HA+ LT G L+S G E G+LG N ++ HP LI+ +S C+ ++ G HS AI+ S ++TWG G +G+LGHGD K++ Q F I+++ G ++ LT+ G V+ +G+ +G+LG + VPN V++L V V ++ + S ++TWG + HG + D L +KI ++ G H +TD V+ +G N GQ G N+ VN Sbjct: 2497 VPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNR-------------MNCDHPKLIDTFKSS--CVRDMSCGSSHSAAILSS-------GELYTWGLGEYGRLGHGDNYTHLKPKKV----------QSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWG-------KGDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNNTTTVNRRPQLVN 2766 HSP 2 Score: 88.5817 bits (218), Expect = 2.305e-17 Identity = 82/291 (28.18%), Postives = 127/291 (43.64%), Query Frame = 1 Query: 3001 IIRQISL--GKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSK--------RLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHG---EISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLG 3831 ++R++++ G HA+ L+ G +YS G + G+LG N+N C P +I E + + I+ G HS I TQN ++TWG G +G+LGHGD +DQ + K R+I SG Q ++ LT+ V+ +G+ YG+LG +P V+ L V V+ +V T S ++TWG + HG + P+ + L +K+ I+ G+ H TD VY +G N GQLG G Sbjct: 3440 VVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLG----------HGNRNSC---DRPRVI--EALRGKGVIDISCGGSHSACI-------TQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQ------------TLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWG-------KGDYYRLGHGVDDHVRRPKRVAA---LQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLGDG 3686 HSP 3 Score: 78.9518 bits (193), Expect = 1.778e-14 Identity = 73/268 (27.24%), Postives = 116/268 (43.28%), Query Frame = 1 Query: 3031 HALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGC--FHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLG 3825 H L LT G +YS G+ + G+LG + ++ P L+ L + I I+ G HS A+ T ++TWG G +G+LGHG +DQ V + SG I+++ G H++ + G V+ +G+ YG+LG P ++RL V V ++ T ++TWG L H + + P+ + + L + + +S G+ H LTD VYC+G N GQLG Sbjct: 28 HFLALTREGEVYSWGSGDGGKLGHGDTSPRE-------------EPTLVT-GLAGKQVI-RISCGSTHSAAV-------TSEGELYTWGRGNYGRLGHGSSEDQLVPVLV------SGLRGHHIIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGF---RLGH-GTEDHVRHPKLV---EALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQLG 260 HSP 4 Score: 58.151 bits (139), Expect = 4.392e-8 Identity = 62/250 (24.80%), Postives = 106/250 (42.40%), Query Frame = 1 Query: 2974 PKSIESGKE-IIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIE----------LNSDECIFSIAAGDY-------HSGAIVVSTSHTTQ-------------------NSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEI 3612 PK I++ K +R +S G +H+ + SG LY+ G E G+LG ++ + + + S +I+I L D ++S GD+ G V + Q + V+TWG G + +LGHG+ D V K I D G + +++++G H + +T+ G V+ +G+N +GQ G T V+R P V ++ + V C +S+ I Sbjct: 2552 PKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYGRLGHGDNY----THLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGN--DTHVRKPQIVD----GLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNNT-------TTVNRRPQLVNGLEGQKITRVACGSSHSI 2784 HSP 5 Score: 56.9954 bits (136), Expect = 7.775e-8 Identity = 59/215 (27.44%), Postives = 96/215 (44.65%), Query Frame = 1 Query: 3268 TQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLP-PAVIHV--DTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRK-----------DNKNLVEVNI 3870 T+ V++WG G G+LGHGD S R +G++ I +S G HS +T++G +Y +G +YG+LG + + LVP LV L +I V + HT+ +++WG L S G P+SI + L + ++ CG + LT V+ +G +LG G D K++V+V++ Sbjct: 33 TREGEVYSWGSGDGGKLGHGD-----TSPREEPTLVTGLAGKQV-IRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSWGDGD---YGKLGRGGSDG-CKNPKSI---ERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSV 234 HSP 6 Score: 55.8398 bits (133), Expect = 1.756e-7 Identity = 59/232 (25.43%), Postives = 92/232 (39.66%), Query Frame = 1 Query: 2989 SGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLIN-------------------IELNSDECIFSIAAGDY----------------------------HSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL 3543 +GK++IR IS G H+ +T G LY+ G G+LG H ++ V P+L++ + D ++S GDY + GA + T++ V+TWG G +LGHG +D +L+ + + +++S+G H + LT+ G VYC+G N GQLG Q P LV L Sbjct: 67 AGKQVIR-ISCGSTHSAAVTSEGELYTWGRGNYGRLG---HGSSEDQLV----------PVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQF--SLALTRDGSVWTWGKGEGFRLGHG-TEDHVRHPKLVEALDG-----KHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQLGDIDCQIRPEPTLVSGL 276
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Medaka
Match: herc4 (HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:NCBI gene;Acc:101174618]) HSP 1 Score: 100.138 bits (248), Expect = 1.192e-20 Identity = 85/304 (27.96%), Postives = 137/304 (45.07%), Query Frame = 1 Query: 2932 LGFIKEKSNRILLLPKSIE--SGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL-VPNLVDRL---PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLG 3825 LG I E+ I++ P+ E GK + R + G+ H L E G++Y+ G N+ GQLG E K V + + I +++ G+ H+ A+ VF+WG G GQLG + ++ R I ++ Q ++ G +HS+ L+ G ++ +G N YGQLG+ +S+ VP + L P A I H+ T S +F WG + Q LN ++ ++ L +Q++ ISCG H + LT + V+ FG+ +GQLG Sbjct: 14 LGGIDEE---IVVEPRKCEFFHGKRV-RDVGCGRRHTAFLLEDGTVYTCGCNDLGQLGHEKSRKKPEQVVALDA-----------------QIIVALSCGESHTLAL-------NDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQ-----VACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGA--HSFALTLSGAVFGWGRN-KFGQLGLNDTNDRCFPALLKA------LRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLG 275 HSP 2 Score: 78.1814 bits (191), Expect = 7.596e-14 Identity = 62/236 (26.27%), Postives = 110/236 (46.61%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVI-HVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIP--------VPIDFVSSDDGITIAMSKSENSTKLFVWGR 3963 + WG +GQLG G ID++ V + +F + ++ + G H+ L G VY G N GQLG + +K P V L +I + HT+ ++F+WG+ + N E+ I +P +I + LS+ ++AQ++CG H+ L+ ++ +G N +GQLGLG + +++P +P +++ + A++ S +F WGR Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRD----VGCGRRHTAFLLEDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEEC---IRVPRNIKS---LSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQS-----ISVPQHLQSLQGIPFAQIAAGGAHSFALTL---SGAVFGWGR 216 HSP 3 Score: 69.707 bits (169), Expect = 2.684e-11 Identity = 67/255 (26.27%), Postives = 116/255 (45.49%), Query Frame = 1 Query: 3256 TSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL-VPNLVDRLPPA-VIHVDTKYFHTVCCTASNEIFTWGIHPNIWQN---SLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDN--KNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGHSLIQEHIKN 3999 T+ ++ V+T G GQLGH + + + + D + + LS G H++ L +KG V+ +G S GQLG+ ++ + VP + L V V Y+H++ + IF+WG QN L + IS+P+ + + L AQI+ G H+ LT V+ +G N +GQLGL + D L++ + ++S + T A++K +F +G G+ + + N Sbjct: 46 TAFLLEDGTVYTCGCNDLGQLGH-EKSRKKPEQVVALD-------AQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWG------QNRYGQLGLGMTGQSISVPQHLQS---LQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGG---VFTFGAGGYGQLGHNSTN 280 HSP 4 Score: 67.781 bits (164), Expect = 1.103e-10 Identity = 70/255 (27.45%), Postives = 111/255 (43.53%), Query Frame = 1 Query: 2971 LPKSIESGKEI-IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECI--FSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQ--------FVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVI-HVDTKYFHTVCCTASN---EIFTWGIHPNIWQNSLNHEKSHGEISIP 3690 +P++I+S ++ + Q++ G H+L L++ G ++S G N GQLG+ Q +S+ L S + I IAAG HS A+ +S + VF WG GQLG D +D+ S+R+I+ +S G H+ LT +G V+ FG YGQLG + + P V L V+ + HT+ T S+ + F G + + S + KS + P Sbjct: 127 VPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGM----------TGQSISVPQ------HLQSLQGIPFAQIAAGGAHSFALTLSGA-------VFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIY--------------ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRSTCNRKSPAPVKGP 344
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Medaka
Match: herc4 (HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:NCBI gene;Acc:101174618]) HSP 1 Score: 99.7525 bits (247), Expect = 1.633e-20 Identity = 85/304 (27.96%), Postives = 137/304 (45.07%), Query Frame = 1 Query: 2932 LGFIKEKSNRILLLPKSIE--SGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL-VPNLVDRL---PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLG 3825 LG I E+ I++ P+ E GK + R + G+ H L E G++Y+ G N+ GQLG E K V + + I +++ G+ H+ A+ VF+WG G GQLG + ++ R I ++ Q ++ G +HS+ L+ G ++ +G N YGQLG+ +S+ VP + L P A I H+ T S +F WG + Q LN ++ ++ L +Q++ ISCG H + LT + V+ FG+ +GQLG Sbjct: 14 LGGIDEE---IVVEPRKCEFFHGKRV-RDVGCGRRHTAFLLEDGTVYTCGCNDLGQLGHEKSRKKPEQVVALDA-----------------QIIVALSCGESHTLAL-------NDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQ-----VACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGA--HSFALTLSGAVFGWGRN-KFGQLGLNDTNDRCFPALLKA------LRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLG 275 HSP 2 Score: 77.7962 bits (190), Expect = 9.936e-14 Identity = 62/236 (26.27%), Postives = 110/236 (46.61%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVI-HVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIP--------VPIDFVSSDDGITIAMSKSENSTKLFVWGR 3963 + WG +GQLG G ID++ V + +F + ++ + G H+ L G VY G N GQLG + +K P V L +I + HT+ ++F+WG+ + N E+ I +P +I + LS+ ++AQ++CG H+ L+ ++ +G N +GQLGLG + +++P +P +++ + A++ S +F WGR Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRD----VGCGRRHTAFLLEDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEEC---IRVPRNIKS---LSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQS-----ISVPQHLQSLQGIPFAQIAAGGAHSFALTL---SGAVFGWGR 216 HSP 3 Score: 69.3218 bits (168), Expect = 3.277e-11 Identity = 67/255 (26.27%), Postives = 116/255 (45.49%), Query Frame = 1 Query: 3256 TSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSL-VPNLVDRLPPA-VIHVDTKYFHTVCCTASNEIFTWGIHPNIWQN---SLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDN--KNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGHSLIQEHIKN 3999 T+ ++ V+T G GQLGH + + + + D + + LS G H++ L +KG V+ +G S GQLG+ ++ + VP + L V V Y+H++ + IF+WG QN L + IS+P+ + + L AQI+ G H+ LT V+ +G N +GQLGL + D L++ + ++S + T A++K +F +G G+ + + N Sbjct: 46 TAFLLEDGTVYTCGCNDLGQLGH-EKSRKKPEQVVALD-------AQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWG------QNRYGQLGLGMTGQSISVPQHLQS---LQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGG---VFTFGAGGYGQLGHNSTN 280 HSP 4 Score: 67.3958 bits (163), Expect = 1.313e-10 Identity = 70/255 (27.45%), Postives = 111/255 (43.53%), Query Frame = 1 Query: 2971 LPKSIESGKEI-IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECI--FSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQ--------FVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVI-HVDTKYFHTVCCTASN---EIFTWGIHPNIWQNSLNHEKSHGEISIP 3690 +P++I+S ++ + Q++ G H+L L++ G ++S G N GQLG+ Q +S+ L S + I IAAG HS A+ +S + VF WG GQLG D +D+ S+R+I+ +S G H+ LT +G V+ FG YGQLG + + P V L V+ + HT+ T S+ + F G + + S + KS + P Sbjct: 127 VPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGM----------TGQSISVPQ------HLQSLQGIPFAQIAAGGAHSFALTLSGA-------VFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIY--------------ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRSTCNRKSPAPVKGP 344
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Medaka
Match: ENSORLT00000015298.2 (probable E3 ubiquitin-protein ligase HERC4 [Source:NCBI gene;Acc:101161054]) HSP 1 Score: 95.9005 bits (237), Expect = 2.693e-19 Identity = 89/301 (29.57%), Postives = 138/301 (45.85%), Query Frame = 1 Query: 2959 RILLLPKSIESGKEI-IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRL-IFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPA-VIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEK-SHGEISIPESIYTGDLLSNQKIAQISCG-TCH-ASILTDKQF---VYCFGSNVWGQLGLGN 3834 + L LP+ +E+ I + Q++ G H + LT+ G +Y+ G N GQLG+ K+ ++ QC+ + M + ++AG HS A+ VS S VF WG GQLG GD D+ + + + S +S G H+ ILT G V+ FG+ +GQLG + + L P LV L A V + +HT+ +N+I+++G + QN L SH + +P + + KI I G C A + TD++F C +N QL L N Sbjct: 103 QALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLG----KKGCSISSPQCVRSLSGMPL----------VQVSAGGDHSFALSVSGS-------VFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTS-------ISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENNKIYSFGCND---QNQLGRSNDSHPSVPLP--VLLPQDIGGTKIRTIFAGENCSFAPLTTDEKFHRDSNCDNANNKAQLCLEN 370 HSP 2 Score: 54.6842 bits (130), Expect = 1.003e-6 Identity = 53/216 (24.54%), Postives = 94/216 (43.52%), Query Frame = 1 Query: 3412 SMGCFHS--VILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVD---RLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENS--TKLFVWGRCGHSLIQEHIKNPVSDTLKPQLLIE 4038 ++GC ++L+ KG VY V Q +P +++ R+P + + ++ HTV T +++TWG + + L K IS P+ + + LS + Q+S G H+ L+ V+ +G N GQLGLG+ +D P +D ++ +I+ K + TK G + N + L+P+L+ E Sbjct: 79 AVGCGDDEVILLSEKGSVY----------RVDVTQALYLPRMLEAFCRIPVSQVACGSR--HTVALTKEGQVYTWGQNS---RGQLGLGKKGCSISSPQCVRS---LSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDR------CTPTSVDSLNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAE 270
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Medaka
Match: rpgrb (X-linked retinitis pigmentosa GTPase regulator [Source:NCBI gene;Acc:101169422]) HSP 1 Score: 94.7449 bits (234), Expect = 4.042e-19 Identity = 84/282 (29.79%), Postives = 127/282 (45.04%), Query Frame = 1 Query: 2998 EIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIE-LNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIE-LSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKS--LVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLG 3831 E I+ ++ G+NH LI T G +Y+ G N GQLG+ + K + +E +S I +AAG S A+ VS +F WG GQ+G G + Q S + + G G+ P+ +S G +HS +T G +Y FG G+LG+ T Q S VP V + AV V HTV T + +FT+G+ L H E +P + + ++ Q++CG H +++TD +Y FG G+L LG Sbjct: 88 ERIKLVACGRNHTLICTAKGQVYACGGNSEGQLGLGDWEEKTS---------------FQRVEFFDSQGAIQMLAAGSNTSAALTVS-------GKLFMWGDNSEGQIGLGK-ESQASSPQEV------GVGR--PVSWVSCGYYHSAFVTVDGALYTFGERDSGKLGLGTEQLSGHRVPQRVKSIKEAVKQVACGGGHTVALT-DDAVFTFGLG---QFGQLGHGTFIFESRLPRLV---EHFKKGRVCQVACGENHTAVITDDGLLYTFGDGRHGKLALG 331 HSP 2 Score: 91.2781 bits (225), Expect = 4.744e-18 Identity = 93/361 (25.76%), Postives = 156/361 (43.21%), Query Frame = 1 Query: 2998 EIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSN------QKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTK-------LFVWGRCGH---SLIQEHIKNPVSDTLKPQLL 4032 ++ R+I+ G H ++TE+G L+ G+N GQLG+ + + VNK C+ + I + +A G H T T V+ G GQLG GD +++ +R+ F F++ G+ Q L+ G S LT G ++ +G+NS GQ+G+ ++ P V P V V Y+H+ T ++T+G E+ G++ + +G + + + Q++CG H LTD V+ FG +GQLG G + E +P ++ G ++ EN T L+ +G H +L +E+ N TL P+ L Sbjct: 36 DVPRKIACGDEHTALITENGRLFMFGSNNWGQLGLGSKLT-----VNKPTCVKALKSERIKL----------VACGRNH-------TLICTAKGQVYACGGNSEGQLGLGDWEEKTSFQRVEF-FDSQGAIQ----MLAAGSNTSAALTVSGKLFMWGDNSEGQIGLGKESQASSPQEVGVGRP-VSWVSCGYYHSAFVTVDGALYTFG------------ERDSGKLGLGTEQLSGHRVPQRVKSIKEAVKQVACGGGHTVALTDDA-VFTFGLGQFGQLGHGTF-----IFESRLPRLVEHFKK--GRVCQVACGENHTAVITDDGLLYTFGDGRHGKLALGEENFTNQFKPTLCPRFL 348
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Medaka
Match: rcbtb2 (RCC1 and BTB domain containing protein 2 [Source:NCBI gene;Acc:101173400]) HSP 1 Score: 91.2781 bits (225), Expect = 2.772e-18 Identity = 94/355 (26.48%), Postives = 157/355 (44.23%), Query Frame = 1 Query: 2965 LLLPKSIESGKEIIRQISL---GKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHG----DIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL--PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNK--NLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGRC-GHSLIQEHI 3993 LL P+ + +IRQ + N AL +T + +++ GTN G LG+ + S I P I++ C I + Y +G VV T + VF WG + QLG+G + VS L+ G+ E++ G H++ LT G V+ +G N+ GQ+G + P V V++V ++ + EI+ WG + N Q L + +G P I L + Q++CG H LTD+ FVY +G+N +GQLG GN+ + L+ + ++ + T A +K++ S ++ +WG+C G ++ H+ Sbjct: 12 LLPPEELR----LIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGD-------------LQSTIEPRRIDVL-----CGKKIVSLSYGTGPHVVIA---TADGEVFAWGHNGYSQLGNGTTNHGLTPALVSTNLL--------GKRV-TEVACGSHHTIALTADGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCN-GQLGLGN---NGNQQTPCRIAA---LQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALPTLINTDKERMVEVAACHTSHTSA-AKTQ-SGQVLMWGQCRGQAVSSPHL 323
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Planmine SMEST
Match: SMESG000005762.1 (SMESG000005762.1) HSP 1 Score: 3084.28 bits (7995), Expect = 0.000e+0 Identity = 1527/1536 (99.41%), Postives = 1532/1536 (99.74%), Query Frame = 1 Query: 304 MLCILPIGTLMGRIQKKSEYWKPNDVTYLLDKLKSGTFITCMKWWTSYKKKNMCIIGRSDGDLLIIDLENGMTLIEETFPDYIYSIDLLITKDKTLSYCFITTKIQSQWKLLLEEIHEKKDITDSDIGYEFMDFSSYHSHNIINXXXXXXXXXXXQRNPSYLPSKLYQFPQSTFLKSQYVNGKCFLGAYDQISGIYKLFECDNLDSSIYEFQLPLSVVDICVTEDLLYLIIEQVKRRSESNNKNAIFTEPQCLKLCIICRQYAHSRIMEFSPISNKSTDIPLLKCSTASKGFSRSIFVEFELPGVYSKEDILSVINFPVFFNFSCLEKIVPENLFTLTPTQLRENLPNNFRKFSTISSLSKEQLYSKWTVDDIKLIAPIFIISSFDISVCYMSQCFEDKFIDNLLSYNLSKAEWLGVGLKLDMNELYRYTAQLLASGIAHLNNKVTKSRKVLILEYFELASASLQTVLNCISQFWPIEKCLIYFLSQLTQINKMSPTNRVFLSNAIIPMFGHVMSDPLDSFGGIEKRTNKYHEKFRRFIVGNCYFNDLKAAKTMFQFGLLDEAFYIAKEKGCVLELFSFIIENNYNTDWFTCFTEENTIKKYLGFDRDFVLNNLGLVELEIVARSEPKFIKALAEFICDLFMRRSDSTNLFSFHTTMHLCSVFNPYGSIIDTLFRIFASENSVDYLSLRKDSEMSLKSFPQRTSSTESLTDMTAFSETIKIKREIGPLLLTFCLLVISKDNQIDEIQDYLYFIQMFTIIHSANENQXXXXXXXXXXXDKPENRYDSLVNLITLKKNIKQQRNILSKFWSNLMAPKLLFLRDELCISISIMDVDLFEENEKSILIKEKSNKKSEIVKKNSTFSLVESKPSQRCQIKLLGFIKEKSNRILLLPKSIESGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGHSLIQEHIKNPVSDTLKPQLLIEYQHVVDNHLAWKNCFGIDTVVNGIPKIISKKQLMIIFLNFSKYIDRTKFLKVFERLKEYDIISDYYLMNELLIQSLFWRIQSIISRLSMKNNDRLKAIENDIKITFKFYLKLSNYEKYQNLKNPILSMITGFFKQHNLPWDIYEQIIRFLIPTQSFLIATQFTKFSLDVLSSDFLRDLFLNVTSETIHDVVSNDNIKRIELSSNDIDHFYELIRAGNAETIYDAANDHKVVFFSGCNHAFVIGRYREIQLKQIVDKLRKRQLNLSVQMIQRLYNDSSIFPDCLDCLSQKFK 4911 MLCILPIGTLMGRIQKKSEYWKPNDVTYLLDKLKSGTFITCMKWWTSYKKKNMCIIGRSDGDLLIIDLE+GMTLIEETFPDYIYSIDLLITKDKTLSYCFITTKIQSQWKLLLEEIHEKKDITDSD+GYEFMDFSSYHSHNIINSKAFKKSKKKKQRNPSYLPSKLYQFPQSTFLKSQYVNGKCFLGAYDQISG YKLFECDNLDSSIYEFQLPLSVVDICVTEDLLYLIIEQVKRRSESNNKN+IFTEPQCLKLCIICRQYAHSRIMEFSPISNKSTDIPLLKCSTASKGFSRSIFVEFELPG+YSKEDILSVINFPVFFNFSCLEKIVPENLFTLTPTQLRENLPNNFRKFSTISSLSKEQLYSKWTVDDIKLIAPIFIISSFDISVCYMSQCFEDKFIDNLLSYNLSKAEWLGVGLKLDMNELYRYTAQLLASGIAHLNNKVTKSRKVLILEYFELASASLQTVLNCISQFWPIEKCLIYFLSQLTQINKMSPTNRVFLSNAIIPMFGHVMSDPLDSFGGIEKRTNKYHEKFRRFIVGNCYFNDLKAAKTMFQFGLLDEAFYIAKEKGCVLELFSFIIENNYNTDWFTCFTEENTIKKYLGFDRDFVLNNLGLVELEIVARSEPKFIKALAEFICDLFMRRSDSTNLFSFHTTMHLCSVFNPYGSIIDTLFRIFASENSVDYLSLRKDSEMSLKSFPQRTSSTESLTDMTAFSETIKIKREIGPLLLTFCLLVISKDNQIDEIQDYLYFIQMFTIIHSANENQESSLSSISSELDKPENRYDSLVNLITLKKNIKQQRNILSKFWSNLMAPKLLFLRDELCISISIMDVDLFEENEKSILIKEKSNKKSEIVKKNSTFSLVESKPSQRCQIKLLGFIKEKSNRILLLPKSIESGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFV KRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPP VIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGHSLIQEHIKNPVSDTLKPQLLIEYQHVVDNHLAWKNCFGIDTVVNGIPKIISKKQLMIIFLNFSKYIDRTKFLKVFERLKEYDIISDYYLMNELLIQSLFWRIQSIISRLSMKNNDR KAIENDIKITFKFYLKLSNYEKYQNLKNPILSMITGFFKQHNLPWDIYE+IIRFLIPTQSFLIATQFTKFSLDVLSSDFLRDLFLNVTSETIHDVVSNDNIKRIELSSNDIDHFYELIRAGNAETIYDAANDHKVVFFSGCNHAFVIGRYREIQLKQIVDKLRKRQLNLSVQMIQRLYNDSSIFPDCLDCLSQKFK Sbjct: 1 MLCILPIGTLMGRIQKKSEYWKPNDVTYLLDKLKSGTFITCMKWWTSYKKKNMCIIGRSDGDLLIIDLESGMTLIEETFPDYIYSIDLLITKDKTLSYCFITTKIQSQWKLLLEEIHEKKDITDSDMGYEFMDFSSYHSHNIINSKAFKKSKKKKQRNPSYLPSKLYQFPQSTFLKSQYVNGKCFLGAYDQISGKYKLFECDNLDSSIYEFQLPLSVVDICVTEDLLYLIIEQVKRRSESNNKNSIFTEPQCLKLCIICRQYAHSRIMEFSPISNKSTDIPLLKCSTASKGFSRSIFVEFELPGLYSKEDILSVINFPVFFNFSCLEKIVPENLFTLTPTQLRENLPNNFRKFSTISSLSKEQLYSKWTVDDIKLIAPIFIISSFDISVCYMSQCFEDKFIDNLLSYNLSKAEWLGVGLKLDMNELYRYTAQLLASGIAHLNNKVTKSRKVLILEYFELASASLQTVLNCISQFWPIEKCLIYFLSQLTQINKMSPTNRVFLSNAIIPMFGHVMSDPLDSFGGIEKRTNKYHEKFRRFIVGNCYFNDLKAAKTMFQFGLLDEAFYIAKEKGCVLELFSFIIENNYNTDWFTCFTEENTIKKYLGFDRDFVLNNLGLVELEIVARSEPKFIKALAEFICDLFMRRSDSTNLFSFHTTMHLCSVFNPYGSIIDTLFRIFASENSVDYLSLRKDSEMSLKSFPQRTSSTESLTDMTAFSETIKIKREIGPLLLTFCLLVISKDNQIDEIQDYLYFIQMFTIIHSANENQESSLSSISSELDKPENRYDSLVNLITLKKNIKQQRNILSKFWSNLMAPKLLFLRDELCISISIMDVDLFEENEKSILIKEKSNKKSEIVKKNSTFSLVESKPSQRCQIKLLGFIKEKSNRILLLPKSIESGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVPKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPTVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVWGRCGHSLIQEHIKNPVSDTLKPQLLIEYQHVVDNHLAWKNCFGIDTVVNGIPKIISKKQLMIIFLNFSKYIDRTKFLKVFERLKEYDIISDYYLMNELLIQSLFWRIQSIISRLSMKNNDRFKAIENDIKITFKFYLKLSNYEKYQNLKNPILSMITGFFKQHNLPWDIYEKIIRFLIPTQSFLIATQFTKFSLDVLSSDFLRDLFLNVTSETIHDVVSNDNIKRIELSSNDIDHFYELIRAGNAETIYDAANDHKVVFFSGCNHAFVIGRYREIQLKQIVDKLRKRQLNLSVQMIQRLYNDSSIFPDCLDCLSQKFK 1536
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Planmine SMEST
Match: SMESG000054104.1 (SMESG000054104.1) HSP 1 Score: 100.523 bits (249), Expect = 1.272e-20 Identity = 86/314 (27.39%), Postives = 142/314 (45.22%), Query Frame = 1 Query: 2932 LGFIKEKSNRILLLPKSIESGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSK--RLIFDFN----NSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPA-VIHVDTKYFHTVCCTASNEIFTWGI--HPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDN 3846 LG +S + +L +E + ++ G H L L +G +Y+ G E +LG++ V ++ P L+ + ++ I IAAG HS AI +++ ++TWG G +G+LGHG+ DDQ K + ++ GSG + ++ + L V+ +G+ YG+LG +P ++ L A VI VD ++ TAS E++TWG + + S NH + PE + L+ +KI ++CG+ H T+ VY +G N GQLG G N Sbjct: 4195 LGIGSTESVQTPILVSGLEEKIVVKVAVNSGGKHCLALCNNGLVYAWGDAEDNKLGLDIRVQPGED---------VLTPTLVKSLVKAE--IIDIAAGGSHSAAI-------SRSGELYTWGKGRYGRLGHGNGDDQPFPKIVEALRGYHVIGVACGSGDAQTLCITKNEDSRIDLVPNTSVWSWGDGDYGKLGRGGFDICKLPMKIETLEGAGVIKVDCGSQFSLVLTASGEVYTWGKGDYFRLGHGSDNHVRK------PEKVAQ---LNRKKIIDVACGSLHCICCTEDGEVYSWGDNDEGQLGDGTTTTN 4481 HSP 2 Score: 86.2705 bits (212), Expect = 2.159e-16 Identity = 79/297 (26.60%), Postives = 138/297 (46.46%), Query Frame = 1 Query: 2962 ILLLPKSIES-GKEIIRQISL--GKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGC--FHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPPA-VIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHG-EISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLG 3831 +++ PK +E+ K I ++++ G HA+ LT++G +S G + G+LG N LK N +P I+ + + +A G HS AIV H++TWG G +G+LGHGD + RL + S + ++++ G ++ LT+ V+ +G+ +G+LG L+P ++ + + VI ++ + T + +++TWG + HG + I E + D L KI ++ G H +TD+ VY +G N GQ G G Sbjct: 3200 VIIGPKRLEALDKYFIVKVAVHSGGRHAIALTKNGETFSWGEGDDGKLG-HNSRLKLN------------YPR--KIKYFKGKRVVDVACGSSHSAAIVFG-------GHLYTWGLGDYGRLGHGD-----TAMRLHPELVKSLRDYKV-VQVACGSRDAQTLALTSDFTVWSWGDGDFGKLGRGGSSGCLIPQKIECMSLSNVIQIECGAQSSFALTENGQVWTWG-------KGDYYRLGHGTDKHIREPMQIED-LKKTKIVHLAVGALHCLAVTDRGQVYSWGDNDHGQQGNG 3460 HSP 3 Score: 71.2478 bits (173), Expect = 9.683e-12 Identity = 66/272 (24.26%), Postives = 112/272 (41.18%), Query Frame = 1 Query: 2935 GFIKEKSNRILLLPKSIE--SGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLI-------------------NIELNSDECIFSIAAGDY-------HSGAIVV-------------------STSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRL-PPAVIHVDTKYFHTVCCTASN 3606 G + S L P+ I+ GK ++ ++ G +H+ + G LY+ G + G+LG + ++ +HP L+ + L SD ++S GD+ SG ++ S+ T+N V+TWG G + +LGHG D I D + + L++G H + +T++G VY +G+N +GQ G T+ ++ P LV L + HV H+V TAS+ Sbjct: 3245 GKLGHNSRLKLNYPRKIKYFKGKRVV-DVACGSSHSAAIVFGGHLYTWGLGDYGRLGHGDTAMR-------------LHPELVKSLRDYKVVQVACGSRDAQTLALTSDFTVWSWGDGDFGKLGRGGSSGCLIPQKIECMSLSNVIQIECGAQSSFALTENGQVWTWGKGDYYRLGHG-TDKHIREPMQIEDLKKTK-----IVHLAVGALHCLAVTDRGQVYSWGDNDHGQQGNGTVTYNMRPTLVSALMDNKIAHVACGSSHSVAWTASD 3496 HSP 4 Score: 59.3066 bits (142), Expect = 3.398e-8 Identity = 62/254 (24.41%), Postives = 103/254 (40.55%), Query Frame = 1 Query: 2872 KNSTFSLVESKPSQRCQIKLLGFIKEKSNRILLLPKSIESGKEIIRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVP---NLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWG 3624 + S F +VE +P + LP+ + K I++I +L++ G LY T+ I+ K N+ ++ CL + +L S + + A Y S + V T+ V++WG G+LG GD D+ + I D + Q +++ G HS+ILT G +Y G N GQLG ++ +P D + V + ++C + IFTWG Sbjct: 434 RESKFEIVEIRPDK-------------------LPRELNE-KFRIKKIVCSGVDTYVLSDCGWLYEVNTS--SDDVIDTFTFKHNAINHQFDCLKNDSVL----KLWSKNRVIDVDANIYSSHVLAV-----TEAGQVYSWGTNTSGKLGQGDTKDR--KRPTIIDTFSRCHLQ--VKQVACGEEHSLILTQSGDIYSCGRNHMGQLGHGDVKDRHLPIRITASDLIGVLVKQIAVDGHQSMCLSNDGAIFTWG 652
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Planmine SMEST
Match: SMESG000033113.1 (SMESG000033113.1) HSP 1 Score: 97.0561 bits (240), Expect = 1.070e-19 Identity = 95/306 (31.05%), Postives = 141/306 (46.08%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSF----VNK--NQCLSIIHPMLINI-------------ELNSDECI-FSIAAGDYHSGAIVVSTS----HT---TQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIE-LSMGCFHSVILTNKGFVYCFGNNSYGQLGVQ-TLQKSLVPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHA-SILTDKQFVYCFGSNVWGQLGL 3828 I +IS G +H L L ++G LYS G NE +LG + + K N +K + H ++ EL D+ FSI +G +V + HT T+NS +F+WG GQLG GD D + + I + +N PI+ ++ G S +LT GF+Y +G+N+YGQLG T +P +V L +++V H + +FTWG H Q L H + SIP + DLL + K++QI CG H + + VY FG +GQLG+ Sbjct: 455 IEKISCGFDHTLFLLKNGKLYSCGNNEFKKLGHDCNKFKPNQIQMLDAHKLIDASAGYDHNAVVTDLGLVFTWGKNSFGELGRDKLSDFSIKLVQSLTGHFIVQVACGHDHTLALTKNSEIFSWGANTCGQLGLGDNFDMVSTPQQIKNLSN------LPIKSITAGDKFSFVLTPSGFLYSWGSNNYGQLGRDLTTSYESLPLMVKHLRKQPIVYVSVGQNHVAALSIDGGVFTWG-HGRYGQ--LGHNNFENK-SIPCIVM--DLLGS-KVSQIECGMNHTLAYMVSTGTVYAFGLGKFGQLGI 747 HSP 2 Score: 69.707 bits (169), Expect = 2.309e-11 Identity = 71/266 (26.69%), Postives = 120/266 (45.11%), Query Frame = 1 Query: 3037 LILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQK---SLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLG 3825 +I+ + S++S G GQLGI+ S+ K I+ S I I+ G H+ ++ +N +++ G +LGH D + ++ + D + I+ S G H+ ++T+ G V+ +G NS+G+LG L LV +L ++ V + HT+ T ++EIF+WG + L + +S P+ I LSN I I+ G + +LT F+Y +GSN +GQLG Sbjct: 412 IIILKMISIFSFGAASYGQLGIDPRNKDYYSYPQK-------------IDKISSSDIEKISCGFDHTLFLL-------KNGKLYSCGNNEFKKLGH-DCNKFKPNQIQMLDAHKL-------IDASAGYDHNAVVTDLGLVFTWGKNSFGELGRDKLSDFSIKLVQSLTGHF---IVQVACGHDHTLALTKNSEIFSWGANTC---GQLGLGDNFDMVSTPQQIKN---LSNLPIKSITAGDKFSFVLTPSGFLYSWGSNNYGQLG 640 HSP 3 Score: 68.1662 bits (165), Expect = 6.628e-11 Identity = 72/279 (25.81%), Postives = 117/279 (41.94%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPE----SIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPV------PIDFVSSDDGITIAMSKSENSTKLFVW-----GRCGHSLIQEHIKNPVS-DTLKPQLLIEYQHVVDNHLA 4068 +F++G +GQLG + + S D +S ++ +S G H++ L G +Y GNN + +LG PN + L +I Y H T +FTWG + S GE+ + SI L+ I Q++CG H LT ++ +G+N GQLGLG DN ++V + PI +++ D + ++ S L+ W G+ G L + P+ L+ Q ++ Y V NH+A Sbjct: 420 IFSFGAASYGQLGIDPRNKDYYSYPQKIDKISSSDIEK----ISCGFDHTLFLLKNGKLYSCGNNEFKKLGHDC--NKFKPNQIQMLDAHKLIDASAGYDHNAVVTDLGLVFTWG------------KNSFGELGRDKLSDFSIKLVQSLTGHFIVQVACGHDHTLALTKNSEIFSWGANTCGQLGLG---DNFDMVSTPQQIKNLSNLPIKSITAGDKFSFVLTP---SGFLYSWGSNNYGQLGRDLTTSYESLPLMVKHLRKQPIV-YVSVGQNHVA 673
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Planmine SMEST
Match: SMESG000033113.1 (SMESG000033113.1) HSP 1 Score: 94.7449 bits (234), Expect = 4.427e-19 Identity = 96/306 (31.37%), Postives = 141/306 (46.08%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSF--------------VNKNQC---LSIIHPMLINI--ELNSDECI-FSIAAGDYHSGAIVVSTS----HT---TQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIE-LSMGCFHSVILTNKGFVYCFGNNSYGQLGVQ-TLQKSLVPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHA-SILTDKQFVYCFGSNVWGQLGL 3828 I +IS G +H L L ++G LYS G NE +LG + + K N + N L ++ N EL D+ FSI +G +V + HT T+NS +F+WG GQLG GD D + + I + +N PI+ ++ G S +LT GF+Y +G+N+YGQLG T +P +V L +++V H + +FTWG H Q L H + SIP + DLL + K++QI CG H + + VY FG +GQLG+ Sbjct: 171 IEKISCGFDHTLFLLKNGKLYSCGNNEFKKLGHDCNKFKPNQIQMLDAHKLIDASAGYDHNAVVTDLGLVFTWGKNSFGELGRDKLSDFSIKLVQSLTGHFIVQVACGHDHTLALTKNSEIFSWGANTCGQLGLGDNFDMVSTPQQIKNLSN------LPIKSITAGDKFSFVLTPSGFLYSWGSNNYGQLGRDLTTSYESLPLMVKHLRKQPIVYVSVGQNHVAALSIDGGVFTWG-HGRYGQ--LGHNNFENK-SIPCIVM--DLLGS-KVSQIECGMNHTLAYMVSTGTVYAFGLGKFGQLGI 463 HSP 2 Score: 67.781 bits (164), Expect = 8.318e-11 Identity = 72/266 (27.07%), Postives = 118/266 (44.36%), Query Frame = 1 Query: 3037 LILTESGSLYSAGTNECGQLGIENHVLKQNSFVNKNQCLSIIHPMLINIELNSDECIFSIAAGDYHSGAIVVSTSHTTQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQK---SLVPNLVDRLPPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLG 3825 +I+ + S++S G GQLGI+ S+ K I+ S I I+ G H T +N +++ G +LGH D + ++ + D + I+ S G H+ ++T+ G V+ +G NS+G+LG L LV +L ++ V + HT+ T ++EIF+WG + L + +S P+ I LSN I I+ G + +LT F+Y +GSN +GQLG Sbjct: 128 IIILKMISIFSFGAASYGQLGIDPRNKDYYSYPQK-------------IDKISSSDIEKISCGFDH-------TLFLLKNGKLYSCGNNEFKKLGH-DCNKFKPNQIQMLDAHKL-------IDASAGYDHNAVVTDLGLVFTWGKNSFGELGRDKLSDFSIKLVQSLTGHF---IVQVACGHDHTLALTKNSEIFSWGANT---CGQLGLGDNFDMVSTPQQIKN---LSNLPIKSITAGDKFSFVLTPSGFLYSWGSNNYGQLG 356 HSP 3 Score: 65.855 bits (159), Expect = 2.762e-10 Identity = 71/278 (25.54%), Postives = 114/278 (41.01%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPE----SIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDNKNLVEVNIPV------PIDFVSSDDGITIAMSKSENSTKLFVW-----GRCGHSLIQEHIKNPVSDTLKPQLLIEYQHVVDNHLA 4068 +F++G +GQLG + + S D +S ++ +S G H++ L G +Y GNN + +LG PN + L +I Y H T +FTWG + S GE+ + SI L+ I Q++CG H LT ++ +G+N GQLGLG DN ++V + PI +++ D + ++ S L+ W G+ G L + P+ + I Y V NH+A Sbjct: 136 IFSFGAASYGQLGIDPRNKDYYSYPQKIDKISSSDIEK----ISCGFDHTLFLLKNGKLYSCGNNEFKKLGHDC--NKFKPNQIQMLDAHKLIDASAGYDHNAVVTDLGLVFTWG------------KNSFGELGRDKLSDFSIKLVQSLTGHFIVQVACGHDHTLALTKNSEIFSWGANTCGQLGLG---DNFDMVSTPQQIKNLSNLPIKSITAGDKFSFVLTP---SGFLYSWGSNNYGQLGRDLTTSYESLPLMVKHLRKQPIVYVSVGQNHVA 389
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Planmine SMEST
Match: SMESG000033113.1 (SMESG000033113.1) HSP 1 Score: 93.5893 bits (231), Expect = 9.386e-19 Identity = 96/306 (31.37%), Postives = 141/306 (46.08%), Query Frame = 1 Query: 3004 IRQISLGKNHALILTESGSLYSAGTNECGQLGIENHVLKQNSF--------------VNKNQC---LSIIHPMLINI--ELNSDECI-FSIAAGDYHSGAIVVSTS----HT---TQNSHVFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIE-LSMGCFHSVILTNKGFVYCFGNNSYGQLGVQ-TLQKSLVPNLVDRL-PPAVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPESIYTGDLLSNQKIAQISCGTCHA-SILTDKQFVYCFGSNVWGQLGL 3828 I +IS G +H L L ++G LYS G NE +LG + + K N + N L ++ N EL D+ FSI +G +V + HT T+NS +F+WG GQLG GD D + + I + +N PI+ ++ G S +LT GF+Y +G+N+YGQLG T +P +V L +++V H + +FTWG H Q L H + SIP + DLL + K++QI CG H + + VY FG +GQLG+ Sbjct: 39 IEKISCGFDHTLFLLKNGKLYSCGNNEFKKLGHDCNKFKPNQIQMLDAHKLIDASAGYDHNAVVTDLGLVFTWGKNSFGELGRDKLSDFSIKLVQSLTGHFIVQVACGHDHTLALTKNSEIFSWGANTCGQLGLGDNFDMVSTPQQIKNLSN------LPIKSITAGDKFSFVLTPSGFLYSWGSNNYGQLGRDLTTSYESLPLMVKHLRKQPIVYVSVGQNHVAALSIDGGVFTWG-HGRYGQ--LGHNNFENK-SIPCIVM--DLLGS-KVSQIECGMNHTLAYMVSTGTVYAFGLGKFGQLGI 331 HSP 2 Score: 65.0846 bits (157), Expect = 4.802e-10 Identity = 72/279 (25.81%), Postives = 114/279 (40.86%), Query Frame = 1 Query: 3283 VFTWGWGVHGQLGHGDIDDQFVSKRLIFDFNNSGSGQEFPIELSMGCFHSVILTNKGFVYCFGNNSYGQLGVQTLQKSLVPNLVDRLPP-AVIHVDTKYFHTVCCTASNEIFTWGIHPNIWQNSLNHEKSHGEISIPE----SIYTGDLLSNQKIAQISCGTCHASILTDKQFVYCFGSNVWGQLGLGNRKDN-------KNLVEVNIPVPIDFVSSDDGITIAMSKSENSTKLFVW-----GRCGHSLIQEHIKNPVSDTLKPQLLIEYQHVVDNHLA 4068 +F++G +GQLG + + S D +S ++ +S G H++ L G +Y GNN + +LG PN + L +I Y H T +FTWG + S GE+ + SI L+ I Q++CG H LT ++ +G+N GQLGLG+ D KNL +PI +++ D + ++ S L+ W G+ G L + P+ + I Y V NH+A Sbjct: 4 IFSFGAASYGQLGIDPRNKDYYSYPQKIDKISSSDIEK----ISCGFDHTLFLLKNGKLYSCGNNEFKKLGHDC--NKFKPNQIQMLDAHKLIDASAGYDHNAVVTDLGLVFTWG------------KNSFGELGRDKLSDFSIKLVQSLTGHFIVQVACGHDHTLALTKNSEIFSWGANTCGQLGLGDNFDMVSTPQQIKNLSN----LPIKSITAGDKFSFVLTP---SGFLYSWGSNNYGQLGRDLTTSYESLPLMVKHLRKQPIVYVSVGQNHVA 257 The following BLAST results are available for this feature:
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of X-linked retinitis pigmentosa GTPase regulator-like protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30017327 ID=SMED30017327|Name=X-linked retinitis pigmentosa GTPase regulator-like protein|organism=Schmidtea mediterranea sexual|type=transcript|length=4983bpback to top protein sequence of SMED30017327-orf-1 >SMED30017327-orf-1 ID=SMED30017327-orf-1|Name=SMED30017327-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1627bp MFSISKFNLEFKRNSTINLIDYCFSDNFALLCIYQSSSSSDTGNLYFIQQback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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