Semaphorin-like protein

Overview
NameSemaphorin-like protein
Smed IDSMED30017203
Length (bp)3263
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Semaphorin-like protein (SMED30017203) t-SNE clustered cells

Violin plots show distribution of expression levels for Semaphorin-like protein (SMED30017203) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Semaphorin-like protein (SMED30017203) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Semaphorin-like protein (SMED30017203) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30017203

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 12

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
protonephridiaSMED30017203SMESG000016303.1 dd_Smed_v4_4702_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30017203SMESG000016303.1 dd_Smed_v4_4702_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30017203SMESG000016303.1 dd_Smed_v4_4702_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30017203SMESG000016303.1 dd_Smed_v4_4702_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30017203SMESG000016303.1 Contig48353newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30017203SMESG000016303.1 Contig48353uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30017203SMESG000049955.1 SMESG000016303.1 Contig33410newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30017203SMESG000049955.1 SMESG000016303.1 Contig33410uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30017203SMESG000081574.1 SMESG000050479.1 SMESG000016292.1 SMESG000016256.1 SMESG000015216.1 SMESG000009922.1 SMESG000016303.1 Contig44698newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30017203SMESG000081574.1 SMESG000050479.1 SMESG000016292.1 SMESG000016256.1 SMESG000015216.1 SMESG000009922.1 SMESG000016303.1 Contig44698uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
protonephridiaSMED30017203SMESG000016303.1 dd_Smed_v6_4702_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
zeta neoblastSMED30017203SMESG000016303.1 dd_Smed_v4_4702_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Semaphorin-like protein vs. TrEMBL
Match: A0A0K0LJ47 (Semaphorin-like protein (Fragment) OS=Schmidtea mediterranea OX=79327 GN=semal PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 3.568e-75
Identity = 129/292 (44.18%), Postives = 188/292 (64.38%), Query Frame = 3 
Query: 1896 RRYLSPLMVVVIVSKTGVLYRIVLCDFDNGRINYGEEKSSDEWRDWCIFRYTDQPYLYRQYAPMESRERGKTYQFRASSVLLEKSIVKQKEPLTY-VYGDPKYNYVKDIMRKKNKLFILTANEVYPVSIDVKCA-EYTKCTECASDPKCMWEKSRNKCRNYYVNSAIPSKYLQDVLDRGFICYKAFPKTSKTLNAADV---FVLNCSNSAFWRGPILWKVNKTEITATNSNGNYLLVNDQ--LVVVSNKQLLEQKSVIKCYGIKEDQDKLYDEAEYDW--ENQFSQIVLNTY 2744
            R+  SPLM+V I+S  G LYR+VLCDFDNG  N+GE+KSS +W +WCIFR+TDQPYLYRQY PMESR+RG++ QFRASS+LL+K IV  ++   + +  DP+++ VKD++RK N L ++T N +  V++++ CA +Y  C +CASDP CMW     KC  Y    +     +QDVLDRGF C +    T++ ++         + C+NS +WRG I WK+N  E    N    +++  DQ  L ++     ++    +KC+G+KED DKL++ AEYDW  +  +S  +L+ Y
Sbjct:    5 RKQFSPLMIVNIISTHGHLYRVVLCDFDNGMRNHGEDKSSGQWYNWCIFRFTDQPYLYRQYTPMESRKRGQSVQFRASSLLLDKKIVTSEDESRFPINRDPQFHVVKDVLRKGNHLHVITTNNIRTVNMEINCAKDYATCIDCASDPDCMWNNGNKKCIKYNEAESQKESIVQDVLDRGFKCAQFIKTTNENVDTRTSKLPLTIYCNNSEYWRGEIQWKIN--EKLVGNDPDQFIIHTDQKYLTILHVNNSIKS---VKCHGVKEDHDKLFNGAEYDWITKRDYSTQLLSVY 291
[Close]
BLAST of Semaphorin-like protein vs. Planmine SMEST
Match: SMESG000016303.1 (SMESG000016303.1)

HSP 1 Score: 1880.92 bits (4871), Expect = 0.000e+0
Identity = 947/983 (96.34%), Postives = 958/983 (97.46%), Query Frame = 3 
Query:   30 MLIKIYLIFQLLNSNVLSMNKHFTMMKEIDGILYVGGRNFLIAYDFDGEKMTYKNSKEYNFDFTNWTYLTFTGAFIEYRPEIIPNPTNAFEACLNWKEDHLNATFRDFAFDYQHARYHTPAGNWNTSNYLCTNNFIKGIEKLDDDTLWVCGTAGAIPKAFIVNRTTLNFIKIIDTNLMSCARYVDESMAVHKDSQNNLYIASGWGIYRPDKKDPDVPNNNSTILYADWRSNKNLFTLPAGMAYVLSSDVNFLDVVKETKTHLYFFGHEINNQYGLNNQEDRNAWQSFMLRICKNDLGFKYTPTLLGNVMRQMVSLKYIAGTINNLDYILASFPDEASYNSSWFHDTAHLPTTHFITPQKINFGCYIGKRPRSISDNFFWSETNVLYINKLADVIFDLNKVIKLRIKNTNELFGCKNQTHEQIPLIGLFNSPGIRGTGMHSTGALCQLQINANIFNEIGTKKPPYHIPNAVSASSAYEELMILNSATFSNFWSRTLHRSNGLTLYPYWNQGVVVGSNELRWYYHNVFDNIGKCQNTSFYNSMNEDNFMKIMNFSNTGWPNELPNRLSSIPSSVCQYSAAELYSFNATVLIPGVEFKKVFLMAENITNYYMPKLKNEDDNGRNLRRYLSPLMVVVIVSKTGVLYRIVLCDFDNGRINYGEEKSSDEWRDWCIFRYTDQPYLYRQYAPMESRERGKTYQFRASSVLLEKSIVKQKEPLTYVYGDPKYNYVKDIMRKKNKLFILTANEVYPVSIDVKCAEYTKCTECASDPKCMWEKSRNKCRNYYVNSAIPSKYLQDVLDRGFICYKAFPKTSKTLNAADVFVLNCSNSAFWRGPILWKVNKTEITATNSNGNYLLVNDQLVVVSNKQLLEQKSVIKCYGIKEDQDKLYDEAEYDWENQFSQIVLNTYNLNPKEKESYALLAWXXXXXXXXXXXXXXXXXXXXXWKYYGHILNKRKPRKDSCDAKVSLXXXXXXXXXXXAVEMKKL 2978
            MLIKIYLIFQLLNSNVLSMNKHFTMMKEIDGILYVGGRNFLIAYDFDGEK+TYKNSKEYNFDFTNWTYLTFTGAFIEYRPEIIPNPTNAFEACLNWKEDHLNATFRDFAFDYQHARYHTPAGNWNTSNYLCTNNFIKGIEKLDDDTLWVCGTAGAIPKAFIVNRTTLNFIKIIDTNLMSCARYVDESMAVHKDSQNNLYIASGWGIYRPDKKDPDVPNNNSTILYADWRSNKNLFTLPAGMAYVLSSDV+FLDVVKETKTHLYFFGHEINNQYGLNNQEDRNAWQSFMLRICKNDLGFKYTPTLLGNVMRQMVSLKYIAGTINNLDYILASFPDEASYNSSWFHDTAHLPTTHFITPQKINFGCYIGKRPRSISDNFFWSETNVLYINKLADVIFDLNKVIKLRIKNTNELFGCKNQTHEQIPLIGLFNSPGIRGTGMHSTGALCQLQINANIFNEIGTKKPPYHIPNAV ASSAYEELMILNSATFSNFWSRTLHRSNGLTLYPYWNQGVVVGSNELRWYYHNVFDNIGKCQNTSFYNSMNEDNFMKIMNFSNTGWPN++     ++        + + +SF       GVEFKKVFL+AENITNYYMPKLKNEDDNGRNLRR+LSPLMVVVIVSKTGVLYRIVLCDFDNGRINYGEEKSSDEWRDWCIFRYTDQPYLYRQYAPMESRERGKTYQFRASSVLLEKSIVKQKEPLTYVYGDPKYNYVKDIMRKKNKLFILTANEVYPVSIDVKCAEYTKCTECASDPKCMWE SRNKCRNYYVNSAIPSKYLQDVLDRGFICYKAFPKTSKTLNAADVFVLNCSNSAFWRGPILWKVNKTEITATNSNGNYLLVNDQLVVVSNKQLLEQKSVIKCYGIKEDQDKLYDEAEYDWENQFSQIVLNTYNLNPKEKESYAL AWLVVFICLLVAILLAILIYWLIWKYYGHILNKRKPRKDSCDAKVSLNNEEINNNDGNAVEMKKL
Sbjct:    1 MLIKIYLIFQLLNSNVLSMNKHFTMMKEIDGILYVGGRNFLIAYDFDGEKLTYKNSKEYNFDFTNWTYLTFTGAFIEYRPEIIPNPTNAFEACLNWKEDHLNATFRDFAFDYQHARYHTPAGNWNTSNYLCTNNFIKGIEKLDDDTLWVCGTAGAIPKAFIVNRTTLNFIKIIDTNLMSCARYVDESMAVHKDSQNNLYIASGWGIYRPDKKDPDVPNNNSTILYADWRSNKNLFTLPAGMAYVLSSDVSFLDVVKETKTHLYFFGHEINNQYGLNNQEDRNAWQSFMLRICKNDLGFKYTPTLLGNVMRQMVSLKYIAGTINNLDYILASFPDEASYNSSWFHDTAHLPTTHFITPQKINFGCYIGKRPRSISDNFFWSETNVLYINKLADVIFDLNKVIKLRIKNTNELFGCKNQTHEQIPLIGLFNSPGIRGTGMHSTGALCQLQINANIFNEIGTKKPPYHIPNAVGASSAYEELMILNSATFSNFWSRTLHRSNGLTLYPYWNQGVVVGSNELRWYYHNVFDNIGKCQNTSFYNSMNEDNFMKIMNFSNTGWPNDIQQLNYTV--------STQQFSFR------GVEFKKVFLIAENITNYYMPKLKNEDDNGRNLRRHLSPLMVVVIVSKTGVLYRIVLCDFDNGRINYGEEKSSDEWRDWCIFRYTDQPYLYRQYAPMESRERGKTYQFRASSVLLEKSIVKQKEPLTYVYGDPKYNYVKDIMRKKNKLFILTANEVYPVSIDVKCAEYTKCTECASDPKCMWEISRNKCRNYYVNSAIPSKYLQDVLDRGFICYKAFPKTSKTLNAADVFVLNCSNSAFWRGPILWKVNKTEITATNSNGNYLLVNDQLVVVSNKQLLEQKSVIKCYGIKEDQDKLYDEAEYDWENQFSQIVLNTYNLNPKEKESYALFAWLVVFICLLVAILLAILIYWLIWKYYGHILNKRKPRKDSCDAKVSLNNEEINNNDGNAVEMKKL 969
[Close]
BLAST of Semaphorin-like protein vs. Planmine SMEST
Match: SMESG000016303.1 (SMESG000016303.1)

HSP 1 Score: 1823.52 bits (4722), Expect = 0.000e+0
Identity = 922/965 (95.54%), Postives = 933/965 (96.68%), Query Frame = 3 
Query:   84 MNKHFTMMKEIDGILYVGGRNFLIAYDFDGEKMTYKNSKEYNFDFTNWTYLTFTGAFIEYRPEIIPNPTNAFEACLNWKEDHLNATFRDFAFDYQHARYHTPAGNWNTSNYLCTNNFIKGIEKLDDDTLWVCGTAGAIPKAFIVNRTTLNFIKIIDTNLMSCARYVDESMAVHKDSQNNLYIASGWGIYRPDKKDPDVPNNNSTILYADWRSNKNLFTLPAGMAYVLSSDVNFLDVVKETKTHLYFFGHEINNQYGLNNQEDRNAWQSFMLRICKNDLGFKYTPTLLGNVMRQMVSLKYIAGTINNLDYILASFPDEASYNSSWFHDTAHLPTTHFITPQKINFGCYIGKRPRSISDNFFWSETNVLYINKLADVIFDLNKVIKLRIKNTNELFGCKNQTHEQIPLIGLFNSPGIRGTGMHSTGALCQLQINANIFNEIGTKKPPYHIPNAVSASSAYEELMILNSATFSNFWSRTLHRSNGLTLYPYWNQGVVVGSNELRWYYHNVFDNIGKCQNTSFYNSMNEDNFMKIMNFSNTGWPNELPNRLSSIPSSVCQYSAAELYSFNATVLIPGVEFKKVFLMAENITNYYMPKLKNEDDNGRNLRRYLSPLMVVVIVSKTGVLYRIVLCDFDNGRINYGEEKSSDEWRDWCIFRYTDQPYLYRQYAPMESRERGKTYQFRASSVLLEKSIVKQKEPLTYVYGDPKYNYVKDIMRKKNKLFILTANEVYPVSIDVKCAEYTKCTECASDPKCMWEKSRNKCRNYYVNSAIPSKYLQDVLDRGFICYKAFPKTSKTLNAADVFVLNCSNSAFWRGPILWKVNKTEITATNSNGNYLLVNDQLVVVSNKQLLEQKSVIKCYGIKEDQDKLYDEAEYDWENQFSQIVLNTYNLNPKEKESYALLAWXXXXXXXXXXXXXXXXXXXXXWKYYGHILNKRKPRKDSCDAKVSLXXXXXXXXXXXAVEMKKL 2978
            MNKHFTMMKEIDGILYVGGRNFLIAYDFDGEK+TYKNSKEYNFDFTNWTYLTFTGAFIEYRPEIIPNPTNAFEACLNWKEDHLNATFRDFAFDYQHARYHTPAGNWNTSNYLCTNNFIKGIEKLDDDTLWVCGTAGAIPKAFIVNRTTLNFIKIIDTNLMSCARYVDESMAVHKDSQNNLYIASGWGIYRPDKKDPDVPNNNSTILYADWRSNKNLFTLPAGMAYVLSSDV+FLDVVKETKTHLYFFGHEINNQYGLNNQEDRNAWQSFMLRICKNDLGFKYTPTLLGNVMRQMVSLKYIAGTINNLDYILASFPDEASYNSSWFHDTAHLPTTHFITPQKINFGCYIGKRPRSISDNFFWSETNVLYINKLADVIFDLNKVIKLRIKNTNELFGCKNQTHEQIPLIGLFNSPGIRGTGMHSTGALCQLQINANIFNEIGTKKPPYHIPNAV ASSAYEELMILNSATFSNFWSRTLHRSNGLTLYPYWNQGVVVGSNELRWYYHNVFDNIGKCQNTSFYNSMNEDNFMKIMNFSNTGWPN++     ++        + + +SF       GVEFKKVFL+AENITNYYMPKLKNEDDNGRNLRR+LSPLMVVVIVSKTGVLYRIVLCDFDNGRINYGEEKSSDEWRDWCIFRYTDQPYLYRQYAPMESRERGKTYQFRASSVLLEKSIVKQKEPLTYVYGDPKYNYVKDIMRKKNKLFILTANEVYPVSIDVKCAEYTKCTECASDPKCMWE SRNKCRNYYVNSAIPSKYLQDVLDRGFICYKAFPKTSKTLNAADVFVLNCSNSAFWRGPILWKVNKTEITATNSNGNYLLVNDQLVVVSNKQLLEQKSVIKCYGIKEDQDKLYDEAEYDWENQFSQIVLNTYNLNPKEKESYAL AWLVVFICLLVAILLAILIYWLIWKYYGHILNKR       DAKVSLNNEEINNNDGNAVEMKKL
Sbjct:    1 MNKHFTMMKEIDGILYVGGRNFLIAYDFDGEKLTYKNSKEYNFDFTNWTYLTFTGAFIEYRPEIIPNPTNAFEACLNWKEDHLNATFRDFAFDYQHARYHTPAGNWNTSNYLCTNNFIKGIEKLDDDTLWVCGTAGAIPKAFIVNRTTLNFIKIIDTNLMSCARYVDESMAVHKDSQNNLYIASGWGIYRPDKKDPDVPNNNSTILYADWRSNKNLFTLPAGMAYVLSSDVSFLDVVKETKTHLYFFGHEINNQYGLNNQEDRNAWQSFMLRICKNDLGFKYTPTLLGNVMRQMVSLKYIAGTINNLDYILASFPDEASYNSSWFHDTAHLPTTHFITPQKINFGCYIGKRPRSISDNFFWSETNVLYINKLADVIFDLNKVIKLRIKNTNELFGCKNQTHEQIPLIGLFNSPGIRGTGMHSTGALCQLQINANIFNEIGTKKPPYHIPNAVGASSAYEELMILNSATFSNFWSRTLHRSNGLTLYPYWNQGVVVGSNELRWYYHNVFDNIGKCQNTSFYNSMNEDNFMKIMNFSNTGWPNDIQQLNYTV--------STQQFSFR------GVEFKKVFLIAENITNYYMPKLKNEDDNGRNLRRHLSPLMVVVIVSKTGVLYRIVLCDFDNGRINYGEEKSSDEWRDWCIFRYTDQPYLYRQYAPMESRERGKTYQFRASSVLLEKSIVKQKEPLTYVYGDPKYNYVKDIMRKKNKLFILTANEVYPVSIDVKCAEYTKCTECASDPKCMWEISRNKCRNYYVNSAIPSKYLQDVLDRGFICYKAFPKTSKTLNAADVFVLNCSNSAFWRGPILWKVNKTEITATNSNGNYLLVNDQLVVVSNKQLLEQKSVIKCYGIKEDQDKLYDEAEYDWENQFSQIVLNTYNLNPKEKESYALFAWLVVFICLLVAILLAILIYWLIWKYYGHILNKR-------DAKVSLNNEEINNNDGNAVEMKKL 944
[Close]
BLAST of Semaphorin-like protein vs. Planmine SMEST
Match: SMESG000016303.1 (SMESG000016303.1)

HSP 1 Score: 1809.27 bits (4685), Expect = 0.000e+0
Identity = 916/959 (95.52%), Postives = 927/959 (96.66%), Query Frame = 3 
Query:  102 MMKEIDGILYVGGRNFLIAYDFDGEKMTYKNSKEYNFDFTNWTYLTFTGAFIEYRPEIIPNPTNAFEACLNWKEDHLNATFRDFAFDYQHARYHTPAGNWNTSNYLCTNNFIKGIEKLDDDTLWVCGTAGAIPKAFIVNRTTLNFIKIIDTNLMSCARYVDESMAVHKDSQNNLYIASGWGIYRPDKKDPDVPNNNSTILYADWRSNKNLFTLPAGMAYVLSSDVNFLDVVKETKTHLYFFGHEINNQYGLNNQEDRNAWQSFMLRICKNDLGFKYTPTLLGNVMRQMVSLKYIAGTINNLDYILASFPDEASYNSSWFHDTAHLPTTHFITPQKINFGCYIGKRPRSISDNFFWSETNVLYINKLADVIFDLNKVIKLRIKNTNELFGCKNQTHEQIPLIGLFNSPGIRGTGMHSTGALCQLQINANIFNEIGTKKPPYHIPNAVSASSAYEELMILNSATFSNFWSRTLHRSNGLTLYPYWNQGVVVGSNELRWYYHNVFDNIGKCQNTSFYNSMNEDNFMKIMNFSNTGWPNELPNRLSSIPSSVCQYSAAELYSFNATVLIPGVEFKKVFLMAENITNYYMPKLKNEDDNGRNLRRYLSPLMVVVIVSKTGVLYRIVLCDFDNGRINYGEEKSSDEWRDWCIFRYTDQPYLYRQYAPMESRERGKTYQFRASSVLLEKSIVKQKEPLTYVYGDPKYNYVKDIMRKKNKLFILTANEVYPVSIDVKCAEYTKCTECASDPKCMWEKSRNKCRNYYVNSAIPSKYLQDVLDRGFICYKAFPKTSKTLNAADVFVLNCSNSAFWRGPILWKVNKTEITATNSNGNYLLVNDQLVVVSNKQLLEQKSVIKCYGIKEDQDKLYDEAEYDWENQFSQIVLNTYNLNPKEKESYALLAWXXXXXXXXXXXXXXXXXXXXXWKYYGHILNKRKPRKDSCDAKVSLXXXXXXXXXXXAVEMKKL 2978
            MMKEIDGILYVGGRNFLIAYDFDGEK+TYKNSKEYNFDFTNWTYLTFTGAFIEYRPEIIPNPTNAFEACLNWKEDHLNATFRDFAFDYQHARYHTPAGNWNTSNYLCTNNFIKGIEKLDDDTLWVCGTAGAIPKAFIVNRTTLNFIKIIDTNLMSCARYVDESMAVHKDSQNNLYIASGWGIYRPDKKDPDVPNNNSTILYADWRSNKNLFTLPAGMAYVLSSDV+FLDVVKETKTHLYFFGHEINNQYGLNNQEDRNAWQSFMLRICKNDLGFKYTPTLLGNVMRQMVSLKYIAGTINNLDYILASFPDEASYNSSWFHDTAHLPTTHFITPQKINFGCYIGKRPRSISDNFFWSETNVLYINKLADVIFDLNKVIKLRIKNTNELFGCKNQTHEQIPLIGLFNSPGIRGTGMHSTGALCQLQINANIFNEIGTKKPPYHIPNAV ASSAYEELMILNSATFSNFWSRTLHRSNGLTLYPYWNQGVVVGSNELRWYYHNVFDNIGKCQNTSFYNSMNEDNFMKIMNFSNTGWPN++     ++        + + +SF       GVEFKKVFL+AENITNYYMPKLKNEDDNGRNLRR+LSPLMVVVIVSKTGVLYRIVLCDFDNGRINYGEEKSSDEWRDWCIFRYTDQPYLYRQYAPMESRERGKTYQFRASSVLLEKSIVKQKEPLTYVYGDPKYNYVKDIMRKKNKLFILTANEVYPVSIDVKCAEYTKCTECASDPKCMWE SRNKCRNYYVNSAIPSKYLQDVLDRGFICYKAFPKTSKTLNAADVFVLNCSNSAFWRGPILWKVNKTEITATNSNGNYLLVNDQLVVVSNKQLLEQKSVIKCYGIKEDQDKLYDEAEYDWENQFSQIVLNTYNLNPKEKESYAL AWLVVFICLLVAILLAILIYWLIWKYYGHILNKR       DAKVSLNNEEINNNDGNAVEMKKL
Sbjct:    1 MMKEIDGILYVGGRNFLIAYDFDGEKLTYKNSKEYNFDFTNWTYLTFTGAFIEYRPEIIPNPTNAFEACLNWKEDHLNATFRDFAFDYQHARYHTPAGNWNTSNYLCTNNFIKGIEKLDDDTLWVCGTAGAIPKAFIVNRTTLNFIKIIDTNLMSCARYVDESMAVHKDSQNNLYIASGWGIYRPDKKDPDVPNNNSTILYADWRSNKNLFTLPAGMAYVLSSDVSFLDVVKETKTHLYFFGHEINNQYGLNNQEDRNAWQSFMLRICKNDLGFKYTPTLLGNVMRQMVSLKYIAGTINNLDYILASFPDEASYNSSWFHDTAHLPTTHFITPQKINFGCYIGKRPRSISDNFFWSETNVLYINKLADVIFDLNKVIKLRIKNTNELFGCKNQTHEQIPLIGLFNSPGIRGTGMHSTGALCQLQINANIFNEIGTKKPPYHIPNAVGASSAYEELMILNSATFSNFWSRTLHRSNGLTLYPYWNQGVVVGSNELRWYYHNVFDNIGKCQNTSFYNSMNEDNFMKIMNFSNTGWPNDIQQLNYTV--------STQQFSFR------GVEFKKVFLIAENITNYYMPKLKNEDDNGRNLRRHLSPLMVVVIVSKTGVLYRIVLCDFDNGRINYGEEKSSDEWRDWCIFRYTDQPYLYRQYAPMESRERGKTYQFRASSVLLEKSIVKQKEPLTYVYGDPKYNYVKDIMRKKNKLFILTANEVYPVSIDVKCAEYTKCTECASDPKCMWEISRNKCRNYYVNSAIPSKYLQDVLDRGFICYKAFPKTSKTLNAADVFVLNCSNSAFWRGPILWKVNKTEITATNSNGNYLLVNDQLVVVSNKQLLEQKSVIKCYGIKEDQDKLYDEAEYDWENQFSQIVLNTYNLNPKEKESYALFAWLVVFICLLVAILLAILIYWLIWKYYGHILNKR-------DAKVSLNNEEINNNDGNAVEMKKL 938
[Close]
BLAST of Semaphorin-like protein vs. Planmine SMEST
Match: SMESG000016303.1 (SMESG000016303.1)

HSP 1 Score: 1806.96 bits (4679), Expect = 0.000e+0
Identity = 915/958 (95.51%), Postives = 926/958 (96.66%), Query Frame = 3 
Query:  105 MKEIDGILYVGGRNFLIAYDFDGEKMTYKNSKEYNFDFTNWTYLTFTGAFIEYRPEIIPNPTNAFEACLNWKEDHLNATFRDFAFDYQHARYHTPAGNWNTSNYLCTNNFIKGIEKLDDDTLWVCGTAGAIPKAFIVNRTTLNFIKIIDTNLMSCARYVDESMAVHKDSQNNLYIASGWGIYRPDKKDPDVPNNNSTILYADWRSNKNLFTLPAGMAYVLSSDVNFLDVVKETKTHLYFFGHEINNQYGLNNQEDRNAWQSFMLRICKNDLGFKYTPTLLGNVMRQMVSLKYIAGTINNLDYILASFPDEASYNSSWFHDTAHLPTTHFITPQKINFGCYIGKRPRSISDNFFWSETNVLYINKLADVIFDLNKVIKLRIKNTNELFGCKNQTHEQIPLIGLFNSPGIRGTGMHSTGALCQLQINANIFNEIGTKKPPYHIPNAVSASSAYEELMILNSATFSNFWSRTLHRSNGLTLYPYWNQGVVVGSNELRWYYHNVFDNIGKCQNTSFYNSMNEDNFMKIMNFSNTGWPNELPNRLSSIPSSVCQYSAAELYSFNATVLIPGVEFKKVFLMAENITNYYMPKLKNEDDNGRNLRRYLSPLMVVVIVSKTGVLYRIVLCDFDNGRINYGEEKSSDEWRDWCIFRYTDQPYLYRQYAPMESRERGKTYQFRASSVLLEKSIVKQKEPLTYVYGDPKYNYVKDIMRKKNKLFILTANEVYPVSIDVKCAEYTKCTECASDPKCMWEKSRNKCRNYYVNSAIPSKYLQDVLDRGFICYKAFPKTSKTLNAADVFVLNCSNSAFWRGPILWKVNKTEITATNSNGNYLLVNDQLVVVSNKQLLEQKSVIKCYGIKEDQDKLYDEAEYDWENQFSQIVLNTYNLNPKEKESYALLAWXXXXXXXXXXXXXXXXXXXXXWKYYGHILNKRKPRKDSCDAKVSLXXXXXXXXXXXAVEMKKL 2978
            MKEIDGILYVGGRNFLIAYDFDGEK+TYKNSKEYNFDFTNWTYLTFTGAFIEYRPEIIPNPTNAFEACLNWKEDHLNATFRDFAFDYQHARYHTPAGNWNTSNYLCTNNFIKGIEKLDDDTLWVCGTAGAIPKAFIVNRTTLNFIKIIDTNLMSCARYVDESMAVHKDSQNNLYIASGWGIYRPDKKDPDVPNNNSTILYADWRSNKNLFTLPAGMAYVLSSDV+FLDVVKETKTHLYFFGHEINNQYGLNNQEDRNAWQSFMLRICKNDLGFKYTPTLLGNVMRQMVSLKYIAGTINNLDYILASFPDEASYNSSWFHDTAHLPTTHFITPQKINFGCYIGKRPRSISDNFFWSETNVLYINKLADVIFDLNKVIKLRIKNTNELFGCKNQTHEQIPLIGLFNSPGIRGTGMHSTGALCQLQINANIFNEIGTKKPPYHIPNAV ASSAYEELMILNSATFSNFWSRTLHRSNGLTLYPYWNQGVVVGSNELRWYYHNVFDNIGKCQNTSFYNSMNEDNFMKIMNFSNTGWPN++     ++        + + +SF       GVEFKKVFL+AENITNYYMPKLKNEDDNGRNLRR+LSPLMVVVIVSKTGVLYRIVLCDFDNGRINYGEEKSSDEWRDWCIFRYTDQPYLYRQYAPMESRERGKTYQFRASSVLLEKSIVKQKEPLTYVYGDPKYNYVKDIMRKKNKLFILTANEVYPVSIDVKCAEYTKCTECASDPKCMWE SRNKCRNYYVNSAIPSKYLQDVLDRGFICYKAFPKTSKTLNAADVFVLNCSNSAFWRGPILWKVNKTEITATNSNGNYLLVNDQLVVVSNKQLLEQKSVIKCYGIKEDQDKLYDEAEYDWENQFSQIVLNTYNLNPKEKESYAL AWLVVFICLLVAILLAILIYWLIWKYYGHILNKR       DAKVSLNNEEINNNDGNAVEMKKL
Sbjct:    1 MKEIDGILYVGGRNFLIAYDFDGEKLTYKNSKEYNFDFTNWTYLTFTGAFIEYRPEIIPNPTNAFEACLNWKEDHLNATFRDFAFDYQHARYHTPAGNWNTSNYLCTNNFIKGIEKLDDDTLWVCGTAGAIPKAFIVNRTTLNFIKIIDTNLMSCARYVDESMAVHKDSQNNLYIASGWGIYRPDKKDPDVPNNNSTILYADWRSNKNLFTLPAGMAYVLSSDVSFLDVVKETKTHLYFFGHEINNQYGLNNQEDRNAWQSFMLRICKNDLGFKYTPTLLGNVMRQMVSLKYIAGTINNLDYILASFPDEASYNSSWFHDTAHLPTTHFITPQKINFGCYIGKRPRSISDNFFWSETNVLYINKLADVIFDLNKVIKLRIKNTNELFGCKNQTHEQIPLIGLFNSPGIRGTGMHSTGALCQLQINANIFNEIGTKKPPYHIPNAVGASSAYEELMILNSATFSNFWSRTLHRSNGLTLYPYWNQGVVVGSNELRWYYHNVFDNIGKCQNTSFYNSMNEDNFMKIMNFSNTGWPNDIQQLNYTV--------STQQFSFR------GVEFKKVFLIAENITNYYMPKLKNEDDNGRNLRRHLSPLMVVVIVSKTGVLYRIVLCDFDNGRINYGEEKSSDEWRDWCIFRYTDQPYLYRQYAPMESRERGKTYQFRASSVLLEKSIVKQKEPLTYVYGDPKYNYVKDIMRKKNKLFILTANEVYPVSIDVKCAEYTKCTECASDPKCMWEISRNKCRNYYVNSAIPSKYLQDVLDRGFICYKAFPKTSKTLNAADVFVLNCSNSAFWRGPILWKVNKTEITATNSNGNYLLVNDQLVVVSNKQLLEQKSVIKCYGIKEDQDKLYDEAEYDWENQFSQIVLNTYNLNPKEKESYALFAWLVVFICLLVAILLAILIYWLIWKYYGHILNKR-------DAKVSLNNEEINNNDGNAVEMKKL 937
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BLAST of Semaphorin-like protein vs. Planmine SMEST
Match: SMESG000016292.1 (SMESG000016292.1)

HSP 1 Score: 1082.4 bits (2798), Expect = 0.000e+0
Identity = 518/895 (57.88%), Postives = 665/895 (74.30%), Query Frame = 3 
Query:   96 FTMMKEIDGILYVGGRNFLIAYDFDGEKMTYKNSKEYNF--DFTNWTYLTFTGAFIEYRPEIIPNPTN-AFEACLNWKEDHLNATFRDFAFDYQHARYHTPAGNWNTSNYLCTNNFIKGIEKLDDDTLWVCGTAGAIPKAFIVNRTTLNFIKIIDTNLMSCARYVDESMAVHKDSQNNLYIASGWGIYRPDKKDPDVPNNNSTILYADWRSNKNLFTLPAGMAYVLSSDVNFLDVVKETKTHLYFFGHEINNQYGLNNQEDRNAWQSFMLRICKNDLGFKYTPTLLGNVMRQMVSLKYIAGTINNLDYILASFPDEASYNSSWFHDTAHLPTTHFITPQKINFGCYIGKRPRSISDNFFWSETNVLYINKLADVIFDLNKVIKLRIKNTNELFGCKNQTHEQIPLIGLFNSPGIRGTGMHSTGALCQLQINANIFNEIGTKKPPYHIPNAVSASSAYEELMILNSATFSNFWSRTLHRSNGLTLYPYWNQGVVVGSNELRWYYHNVFDNIGKCQNTSFYNSMNEDNFMKIMNFSNTGWPNELPNRLSSIPSSVCQYSAAELYSFNATVLIPGVEFKKVFLMAENITNYYMPKLKNEDDNGRNLRRYLSPLMVVVIVSKTGVLYRIVLCDFDNGRINYGEEKSSDEWRDWCIFRYTDQPYLYRQYAPMESRERGKTYQFRASSVLLEKSIVKQKEPLTY-VYGDPKYNYVKDIMRKKNKLFILTANEVYPVSIDVKCA-EYTKCTECASDPKCMWEKSRNKCRNYYVNSAIPSKYLQDVLDRGFICYKAFPKTSKTLNAAD---VFVLNCSNSAFWRGPILWKVNKTEITATNSNGNYLLVNDQ--LVVVSNKQLLEQKSVIKCYGIKEDQDKLYDEAEYDW--ENQFSQIVLNTY 2744
            ++++KEIDG++YVGGRN L +Y    EK+    ++ Y F  +  N + + F    +E+  EI  NPT+ AF+ CLNWK++HLN ++R+ AFDYQH  YHTP+G+W T +++C N+FIKGIEKLD+ TLWVCGT G+ P+AF V + +L FIK ID NLMSCARY DE M  ++D  +NLYI SGWG+Y+PDK +PDVPNNNST++Y+DWR  +NLFTLP+ MA+VLSSDV+F++VVKET+ HLYFFGHEINNQYGLNNQEDRNAWQSFM+RICKND+GFK  P     +MR M    Y  G+I   DY L+   DEA +N  WFH+T HLPT HF + QKINFGCYIGKRPRSISDN+FW +TNVLY+N L DVIFD NK IK + KN N+ FGC  + HEQIPLIGLFNSPGIRGT M STGALCQLQIN+NIFNEIG+KK PYH+ N + A+ AYEELM+LNS + SNF+SRTLHR++GLT+YPYWNQGV++G N  R YY NVFDNIGKCQN+SF+ ++ +D F+KIMNFSNTGWPNELPNRLSSIPS+VCQ+SAAELYSFNATVLIPGVEF+ VFL+A+NITNYYM +L+         R+  SPLM V+I+S  G LYR+VLCDFDNG  N+GE+KSS +W +WCIFR+TDQPYLYRQY PMESR+RG++ QFRASS+LL+K IV  ++   + +  DP+++ VKD++RK N L ++T N +  V++++ CA +Y  C +CASDP CMW     KC  Y    +     +QDVLDRGF C K     ++ ++         + C+NS +WRG I WK+N  E    N    +++  DQ  L ++     ++    +KC+G+KED DKL++ AEYDW  +  +S  +L+ Y
Sbjct:   13 YSVVKEIDGVVYVGGRNSLSSYQSINEKLLPLVNETYKFPPEIFNGSDIGFEFKILEFPSEITNNPTSLAFDTCLNWKQNHLNDSYRNSAFDYQHRNYHTPSGDWETMDFICMNSFIKGIEKLDNTTLWVCGTFGSFPRAFSVWKDSLKFIKFIDVNLMSCARYTDEPMVSYRDQLDNLYIGSGWGLYKPDKSNPDVPNNNSTMMYSDWRLFRNLFTLPSAMAWVLSSDVHFINVVKETEKHLYFFGHEINNQYGLNNQEDRNAWQSFMVRICKNDVGFKSVPMKEAWLMRHMSGHFYNIGSIGEFDYTLSPTHDEAGHNPDWFHNTVHLPTKHFTSSQKINFGCYIGKRPRSISDNYFWGQTNVLYLNMLVDVIFDPNKTIKFKTKNNNKYFGCSKEPHEQIPLIGLFNSPGIRGTAMSSTGALCQLQINSNIFNEIGSKKKPYHLTNILKANDAYEELMLLNSVSVSNFYSRTLHRTSGLTIYPYWNQGVLIGDNVHRKYYKNVFDNIGKCQNSSFFKTLTKDKFLKIMNFSNTGWPNELPNRLSSIPSAVCQFSAAELYSFNATVLIPGVEFRNVFLVADNITNYYMHELEIATTENPGHRKIFSPLMTVIIISTHGHLYRVVLCDFDNGMRNHGEDKSSGQWYNWCIFRFTDQPYLYRQYTPMESRKRGQSVQFRASSLLLDKKIVTSEDESRFPINRDPQFHVVKDVLRKGNHLHVITTNNIRTVNMEINCAKDYATCIDCASDPDCMWNNGNKKCIKYNEAESQKESIVQDVLDRGFKCAKFIKAANENVDTRTNKLPLTIYCNNSEYWRGEIQWKIN--EKLVGNDPDQFIIHTDQKYLTILHVNNSIKS---VKCHGVKEDHDKLFNGAEYDWITKRDYSTQLLSVY 902
The following BLAST results are available for this feature:
BLAST of Semaphorin-like protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Semaphorin-like protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Semaphorin-like protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Semaphorin-like protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Semaphorin-like protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Semaphorin-like protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Semaphorin-like protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Semaphorin-like protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0K0LJ473.568e-7544.18Semaphorin-like protein (Fragment) OS=Schmidtea me... [more]
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BLAST of Semaphorin-like protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Semaphorin-like protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Semaphorin-like protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Semaphorin-like protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Semaphorin-like protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Semaphorin-like protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000016303.10.000e+096.34SMESG000016303.1[more]
SMESG000016303.10.000e+095.54SMESG000016303.1[more]
SMESG000016303.10.000e+095.52SMESG000016303.1[more]
SMESG000016303.10.000e+095.51SMESG000016303.1[more]
SMESG000016292.10.000e+057.88SMESG000016292.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30017203 ID=SMED30017203|Name=Semaphorin-like protein|organism=Schmidtea mediterranea sexual|type=transcript|length=3263bp
GGGATTAAAGTTCATTGCTTTCAGTTTAAATGTTAATAAAAATCTATTTA
ATTTTTCAATTGCTAAATTCAAATGTTTTAAGTATGAATAAACATTTTAC
TATGATGAAAGAAATAGACGGGATTCTCTACGTTGGTGGAAGGAATTTTT
TAATTGCTTATGACTTCGACGGAGAAAAAATGACTTATAAAAATTCCAAA
GAGTATAATTTTGACTTCACGAATTGGACATATCTCACATTCACTGGTGC
ATTCATTGAATATCGCCCTGAAATTATACCTAATCCCACAAATGCGTTCG
AGGCCTGTCTAAATTGGAAAGAAGATCACCTCAATGCTACGTTCAGAGAC
TTTGCGTTCGACTATCAGCACGCAAGATATCATACTCCTGCAGGAAACTG
GAATACCTCCAACTATCTGTGCACCAATAACTTTATCAAGGGCATAGAAA
AGTTGGATGACGATACTTTATGGGTTTGCGGGACAGCCGGGGCGATTCCT
AAAGCCTTTATAGTGAACCGAACTACTTTAAATTTCATAAAAATCATCGA
CACAAACTTGATGAGTTGCGCTCGATATGTCGATGAAAGCATGGCAGTCC
ATAAAGATTCTCAAAATAACCTTTATATAGCTTCTGGATGGGGTATATAC
AGGCCAGATAAAAAGGATCCCGATGTACCAAATAATAATTCGACAATTCT
CTATGCAGATTGGAGATCGAACAAAAACCTGTTTACCTTACCTGCCGGAA
TGGCTTACGTGTTGTCTAGTGACGTAAACTTTCTTGATGTAGTCAAAGAA
ACCAAAACACATTTGTATTTTTTTGGTCATGAAATTAACAATCAGTACGG
ACTGAACAACCAAGAAGACAGGAATGCTTGGCAAAGTTTTATGTTGAGGA
TCTGTAAGAATGATCTAGGATTTAAATATACTCCGACATTATTGGGAAAT
GTGATGAGACAAATGGTTTCACTGAAATATATCGCTGGGACCATAAACAA
CCTTGATTACATTTTGGCGTCCTTTCCTGACGAAGCAAGCTACAACAGCT
CCTGGTTTCACGACACTGCTCATTTACCCACGACTCATTTCATTACGCCC
CAGAAAATAAATTTCGGTTGCTATATTGGCAAAAGGCCCCGCTCAATCAG
TGACAACTTTTTCTGGAGCGAAACGAATGTTTTGTACATAAACAAGCTGG
CTGATGTTATATTCGATCTAAATAAGGTAATCAAATTGAGAATAAAAAAT
ACTAACGAATTATTTGGCTGTAAAAACCAAACCCATGAACAAATTCCTCT
GATAGGGCTATTCAACAGTCCTGGCATCAGAGGAACTGGAATGCATTCTA
CTGGAGCTCTCTGTCAATTACAAATCAATGCAAATATATTCAATGAAATA
GGAACAAAGAAACCTCCCTATCACATCCCCAATGCTGTTAGTGCTTCATC
TGCATACGAGGAATTAATGATTTTGAATTCTGCGACCTTTTCAAATTTTT
GGAGCAGAACTCTTCATCGAAGCAACGGACTGACATTGTACCCGTATTGG
AATCAGGGTGTAGTCGTTGGGTCTAATGAATTACGATGGTATTACCATAA
CGTTTTCGATAATATTGGAAAATGTCAAAATACTTCTTTCTATAATTCCA
TGAATGAAGATAATTTTATGAAAATTATGAACTTTAGCAACACAGGATGG
CCAAATGAGTTACCAAATCGGTTGTCTTCGATACCGTCGAGCGTTTGTCA
GTATTCAGCAGCTGAATTATACAGTTTCAACGCAACAGTTCTCATTCCGG
GGGTCGAGTTCAAGAAGGTTTTTTTGATGGCGGAAAACATCACCAATTAC
TATATGCCTAAATTGAAAAACGAGGATGACAACGGAAGAAATCTGAGACG
GTATTTGTCTCCGCTCATGGTTGTTGTAATAGTGTCAAAAACTGGAGTAC
TTTATCGAATTGTTCTTTGCGATTTCGACAATGGCAGGATCAATTACGGG
GAAGAAAAAAGTTCCGATGAATGGCGCGATTGGTGCATATTCCGCTACAC
CGACCAACCGTATCTGTATCGGCAATATGCACCAATGGAAAGTCGAGAAA
GAGGAAAAACATATCAATTTAGGGCCAGTTCAGTGTTACTTGAAAAGAGT
ATAGTTAAACAAAAAGAACCTCTGACTTATGTCTATGGCGATCCAAAATA
TAACTATGTTAAGGATATTATGAGAAAGAAAAACAAACTGTTTATATTGA
CAGCAAATGAAGTATATCCTGTTAGTATAGATGTGAAGTGTGCCGAATAT
ACAAAGTGCACCGAATGTGCAAGTGACCCTAAATGCATGTGGGAGAAATC
CCGTAACAAATGCAGAAATTATTATGTAAATTCTGCAATACCCTCGAAGT
ACCTTCAAGATGTATTGGATAGAGGATTCATTTGCTACAAGGCCTTTCCT
AAAACTTCCAAAACGCTAAATGCTGCAGACGTTTTCGTGTTGAATTGTTC
AAATAGCGCGTTCTGGAGGGGACCAATTCTCTGGAAAGTCAATAAGACTG
AAATCACTGCAACAAACTCAAATGGAAATTATTTGCTTGTGAATGACCAG
TTAGTAGTTGTTAGCAACAAACAATTACTGGAACAGAAATCGGTTATCAA
GTGTTATGGGATTAAGGAGGATCAAGATAAATTATATGATGAAGCAGAAT
ATGATTGGGAGAACCAGTTCTCTCAGATCGTTCTCAACACATACAATCTG
AATCCCAAAGAAAAAGAAAGTTATGCTTTGCTCGCTTGGCTTGTCGTTTT
CATCTGTCTCCTGGTGGCTATTCTCCTTGCCATACTCATTTATTGGTTGA
TCTGGAAGTATTACGGACACATCCTGAATAAACGGAAACCTCGAAAGGAT
TCATGTGATGCAAAGGTTTCATTGAACAATGAAGAAATTAATAATAATGA
TGGGAATGCAGTCGAGATGAAGAAATTATGAGGAAATCCGAATATTTCCA
ATCATTCCAAATTGAATTTGAAATTATTACTTGTTTTTATCAATTTTTGT
AGTTCATATTTATGAATTATTTTGTTTTAATTTTTTCTCCAATTTCGGTA
CCTTGCAATGTTTTTTCACATTTACAATTGTTGATTAATATTTCTCAGAT
GCCAACACCCCCCCATTTAACTCTCAAGTTACATATTGTGAGAATTGGCT
TTGCAATTTTGAAATGAAATTGCCCTTGTATATAAACCGTTTGAGTAGCC
ATATGGACGGGTG
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protein sequence of SMED30017203-orf-1

>SMED30017203-orf-1 ID=SMED30017203-orf-1|Name=SMED30017203-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=984bp
MLIKIYLIFQLLNSNVLSMNKHFTMMKEIDGILYVGGRNFLIAYDFDGEK
MTYKNSKEYNFDFTNWTYLTFTGAFIEYRPEIIPNPTNAFEACLNWKEDH
LNATFRDFAFDYQHARYHTPAGNWNTSNYLCTNNFIKGIEKLDDDTLWVC
GTAGAIPKAFIVNRTTLNFIKIIDTNLMSCARYVDESMAVHKDSQNNLYI
ASGWGIYRPDKKDPDVPNNNSTILYADWRSNKNLFTLPAGMAYVLSSDVN
FLDVVKETKTHLYFFGHEINNQYGLNNQEDRNAWQSFMLRICKNDLGFKY
TPTLLGNVMRQMVSLKYIAGTINNLDYILASFPDEASYNSSWFHDTAHLP
TTHFITPQKINFGCYIGKRPRSISDNFFWSETNVLYINKLADVIFDLNKV
IKLRIKNTNELFGCKNQTHEQIPLIGLFNSPGIRGTGMHSTGALCQLQIN
ANIFNEIGTKKPPYHIPNAVSASSAYEELMILNSATFSNFWSRTLHRSNG
LTLYPYWNQGVVVGSNELRWYYHNVFDNIGKCQNTSFYNSMNEDNFMKIM
NFSNTGWPNELPNRLSSIPSSVCQYSAAELYSFNATVLIPGVEFKKVFLM
AENITNYYMPKLKNEDDNGRNLRRYLSPLMVVVIVSKTGVLYRIVLCDFD
NGRINYGEEKSSDEWRDWCIFRYTDQPYLYRQYAPMESRERGKTYQFRAS
SVLLEKSIVKQKEPLTYVYGDPKYNYVKDIMRKKNKLFILTANEVYPVSI
DVKCAEYTKCTECASDPKCMWEKSRNKCRNYYVNSAIPSKYLQDVLDRGF
ICYKAFPKTSKTLNAADVFVLNCSNSAFWRGPILWKVNKTEITATNSNGN
YLLVNDQLVVVSNKQLLEQKSVIKCYGIKEDQDKLYDEAEYDWENQFSQI
VLNTYNLNPKEKESYALLAWLVVFICLLVAILLAILIYWLIWKYYGHILN
KRKPRKDSCDAKVSLNNEEINNNDGNAVEMKKL*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000014zeta neoblast
PLANA:0000020protonephridia
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR002165Plexin_repeat
IPR001627Semap_dom
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding
Vocabulary: cellular component
TermDefinition
GO:0016020membrane