Protocadherin 1

Overview


Name	Protocadherin 1
Smed ID	SMED30017193
Length (bp)	2689

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Protocadherin 1 (SMED30017193) t-SNE clustered cells

Violin plots show distribution of expression levels for Protocadherin 1 (SMED30017193) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Protocadherin 1 (SMED30017193) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Protocadherin 1 (SMED30017193) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30017193

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 10

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
head region	SMED30017193	h1SMcG0020551	SmedASXL_009127	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
nervous system	SMED30017193	h1SMcG0020551	dd_Smed_v4_12697_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30017193	h1SMcG0020551	dd_Smed_v4_12697_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neuron	SMED30017193	h1SMcG0020551	dd_Smed_v4_12697_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchyma	SMED30017193	h1SMcG0020551	dd_Smed_v4_12697_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cilated neuron	SMED30017193	h1SMcG0020551	dd_Smed_v4_12697_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
nervous system	SMED30017193	h1SMcG0020551	dd_Smed_v4_9828_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30017193	h1SMcG0020551	dd_Smed_v4_9828_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchyma	SMED30017193	h1SMcG0020551	dd_Smed_v4_9828_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cilated neuron	SMED30017193	h1SMcG0020551	dd_Smed_v4_9828_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

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BLAST of Protocadherin 1 vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661])

HSP 1 Score: 174.096 bits (440), Expect = 9.973e-44
Identity = 206/683 (30.16%), Postives = 326/683 (47.73%), Query Frame = 3

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGD----------MTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIP------VTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            DRE LC     + + + +E  C     + I  N   +       +I+I V+D NDN P   +P I++++ E+  I  + P+  A D D+  +    Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN P  T ++QL ATD+D   N  +RY     +    + LF +    G+I +   LD E   E  I     +  +G S      A  TVTI+V+DVNDN P I ++  I  I+  V   YL +          +TV+D D+ +NG V C +   E ++      +  N  Y + TSS  D+E +   S KIV SD+G+P L+ +  + ++++D +DN   F +      V E    G +L  I A D+DS  + +       + +F +LDR+TGV+ +++VFDRE ++ +   VT R+  +P     A +++ +LD NDN PKF    + F VSE       +G +   D D   N  V  +    ++    F +D   G I+     D E Q  +   + ATD G P  RSST  V ++V+D NDN P   S           +++    IP      V   D DT  N ++++    +       LFRID  TG IT++
Sbjct:   93 DREKLC-----AGASYAEENECFFELEVVILPNDFFR-----LIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYEL-LNGQSV-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDRE---ETAIHKVTVLASDGSS----TPARATVTINVTDVNDNPPNIDLRYIISPINGTV---YLSEKDPVNTKIALITVSDKDTDVNGKVICFI---EREVPFHLKAVYDNQ-YLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDN---FVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQP-PRSSTAKVTINVMDVNDNSPVVISPPSNTSF----KLVPLSAIPGSVVAEVFAVDVDTGMNAELKY---TIVSGNNKGLFRIDPVTGNITLE 738

[Close]

BLAST of Protocadherin 1 vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661])

HSP 1 Score: 173.326 bits (438), Expect = 1.062e-43
Identity = 207/688 (30.09%), Postives = 324/688 (47.09%), Query Frame = 3

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGD----------MTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQR------LDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIP------VTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            DRE LC     + + + +E  C     + I  N   +       +I+I V+D NDN P   +P I++++ E+  I  + P+  A D D+  +    Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN P  T ++QL ATD+D   N  +RY     +    + LF +    G+I +   LD E   E  I     +  +G S      A  TVTI+V+DVNDN P I ++  I  I+  V   YL +          +TV+D D+ +NG V C +   E ++      +  N  Y + TSS  D+E +   S KIV SD+G+P L+ +  + ++++D +DN   F +      V E    G +L  I A D+DS  + +       + +F +LDR+TGV+ +++VFDRE ++ +   VT R+  +P     A +++ +LD NDN PKF    + F VSE       +G +   D D   N  V  +         LD Y         G I+     D E Q  +   + ATD G P  RSST  V ++V+D NDN P   S           +++    IP      V   D DT  N ++++    +       LFRID  TG IT++
Sbjct:   93 DREKLC-----AGASYAEENECFFELEVVILPNDFFR-----LIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYEL-LNGQSV-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDRE---ETAIHKVTVLASDGSS----TPARATVTINVTDVNDNPPNIDLRYIISPINGTV---YLSEKDPVNTKIALITVSDKDTDVNGKVICFI---EREVPFHLKAVYDNQ-YLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYS--------GVIKSNVSFDREQQSSYTFDVKATDGGQP-PRSSTAKVTINVMDVNDNSPVVISPPSNTSF----KLVPLSAIPGSVVAEVFAVDVDTGMNAELKY---TIVSGNNKGLFRIDPVTGNITLE 738

[Close]

BLAST of Protocadherin 1 vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661])

HSP 1 Score: 173.711 bits (439), Expect = 1.088e-43
Identity = 206/683 (30.16%), Postives = 326/683 (47.73%), Query Frame = 3

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGD----------MTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIP------VTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            DRE LC     + + + +E  C     + I  N   +       +I+I V+D NDN P   +P I++++ E+  I  + P+  A D D+  +    Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN P  T ++QL ATD+D   N  +RY     +    + LF +    G+I +   LD E   E  I     +  +G S      A  TVTI+V+DVNDN P I ++  I  I+  V   YL +          +TV+D D+ +NG V C +   E ++      +  N  Y + TSS  D+E +   S KIV SD+G+P L+ +  + ++++D +DN   F +      V E    G +L  I A D+DS  + +       + +F +LDR+TGV+ +++VFDRE ++ +   VT R+  +P     A +++ +LD NDN PKF    + F VSE       +G +   D D   N  V  +    ++    F +D   G I+     D E Q  +   + ATD G P  RSST  V ++V+D NDN P   S           +++    IP      V   D DT  N ++++    +       LFRID  TG IT++
Sbjct:   93 DREKLC-----AGASYAEENECFFELEVVILPNDFFR-----LIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYEL-LNGQSV-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDRE---ETAIHKVTVLASDGSS----TPARATVTINVTDVNDNPPNIDLRYIISPINGTV---YLSEKDPVNTKIALITVSDKDTDVNGKVICFI---EREVPFHLKAVYDNQ-YLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDN---FVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQP-PRSSTAKVTINVMDVNDNSPVVISPPSNTSF----KLVPLSAIPGSVVAEVFAVDVDTGMNAELKY---TIVSGNNKGLFRIDPVTGNITLE 738

[Close]

BLAST of Protocadherin 1 vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661])

HSP 1 Score: 173.711 bits (439), Expect = 1.098e-43
Identity = 206/683 (30.16%), Postives = 326/683 (47.73%), Query Frame = 3

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGD----------MTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIP------VTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            DRE LC     + + + +E  C     + I  N   +       +I+I V+D NDN P   +P I++++ E+  I  + P+  A D D+  +    Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN P  T ++QL ATD+D   N  +RY     +    + LF +    G+I +   LD E   E  I     +  +G S      A  TVTI+V+DVNDN P I ++  I  I+  V   YL +          +TV+D D+ +NG V C +   E ++      +  N  Y + TSS  D+E +   S KIV SD+G+P L+ +  + ++++D +DN   F +      V E    G +L  I A D+DS  + +       + +F +LDR+TGV+ +++VFDRE ++ +   VT R+  +P     A +++ +LD NDN PKF    + F VSE       +G +   D D   N  V  +    ++    F +D   G I+     D E Q  +   + ATD G P  RSST  V ++V+D NDN P   S           +++    IP      V   D DT  N ++++    +       LFRID  TG IT++
Sbjct:   93 DREKLC-----AGASYAEENECFFELEVVILPNDFFR-----LIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYEL-LNGQSV-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDRE---ETAIHKVTVLASDGSS----TPARATVTINVTDVNDNPPNIDLRYIISPINGTV---YLSEKDPVNTKIALITVSDKDTDVNGKVICFI---EREVPFHLKAVYDNQ-YLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDN---FVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQP-PRSSTAKVTINVMDVNDNSPVVISPPSNTSF----KLVPLSAIPGSVVAEVFAVDVDTGMNAELKY---TIVSGNNKGLFRIDPVTGNITLE 738

[Close]

BLAST of Protocadherin 1 vs. Ensembl Human
Match: PCDHGB5 (protocadherin gamma subfamily B, 5 [Source:HGNC Symbol;Acc:HGNC:8712])

HSP 1 Score: 159.458 bits (402), Expect = 1.374e-39
Identity = 163/591 (27.58%), Postives = 261/591 (44.16%), Query Frame = 3

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNAD-SKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDEN-VPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD----STSSLEYYLTDKKDLA---FVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSP-------------NKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            DRE +C           K+  C + F         V  NP     + + + D ND+ PK  QN   L + ESA+ G +  L+ A D D  L+S   Y L  N   S   K     +K+P+L L  +LD E  + H   L A +   P    T  + + V D ND+PP++    ++V++ EN P  T ++Q+SATD D   N  + YS    GQ   L    G I     LD+E+ +E ++ +  +     ++Q T++       I++ D NDN P +   + +  I EN VP   +  + + D DSG NG+V+C +        +S SK S    Y + T  + D E +   +V I  +D G+P LSSS+ + L I+DV+DN   F +  +   V E    G  +A++ A D D       S     +D + LA   +V +  Q+GVV + + FD E    +++ +  R++ SP             ++ D+A  ++      D    FD      V    E  + + KV A D D  +N  + Y   +  E        + G++R  + L         L++   D G P
Sbjct:   91 DREEICG----------KKPACALEF-------EAVAENPLNFYHVNVEIEDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPELALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRENVPPGTTVLQVSATDQDEGINSEITYSFYRTGQIFSLNSKSGEITTQKKLDFEETKEYSMVVEGRDGGGLVAQCTVE-------INIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHDQDSGENGEVNCQLQGEVPFKIISSSKNS----YKLVTDGTLDREQTPEYNVTITATDRGKPPLSSSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMASDLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVGDRNDNAPRVLYPALGPDGSALFDM-----VPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQP 648

[Close]

BLAST of Protocadherin 1 vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4])

HSP 1 Score: 122.479 bits (306), Expect = 7.194e-28
Identity = 160/601 (26.62%), Postives = 271/601 (45.09%), Query Frame = 3

Query:  477 PLQEAVDNDSPLHSKS---VYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSI-EGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSR---VSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSS--LEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRL-YSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLI---IVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITM--DIDQQKTLT 2216
            P++  + +    H+ S    Y +    DS+   L  +D    ++ L  S+D E    H  K+ A E   P    +  V V V+D  D+ PI+   S+   I E+ P  T ++ + A D DS  N  + YS+ EG G++L  I    G+I+    LD E L    I L V  +D G  +   + +T  V I+V DVNDN P     +   +I EN+     +  +  TD D G NG V   +A        S S +   TI       +    + ++   ++  I   D  QP LSS+V L + + D++D+    I       ++E   IG  + ++ A+D+DS  +  ++Y +   +D     +D  +G++++ ++ DRET   Y + VT R+  +P+   S  + + + DINDN P FD+  Y+ ++SE      QI  + A D D   +  + Y  +  D   F      +G       +  E++   H +   I ATD+G          V+   ID+ ++ P F    F + I  H+  I   +I +   D D  +     N ++V      + FRID  +G+I++  D+D++   T
Sbjct:  179 PIETIIASVKASHASSQPLYYSMVAPQDSRSQNLFTLDTMSGEIRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKNLLAINAKSGVIQTAAPLDRETL--SLIRLDVIASDKGTPK---RESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMA--------SSSGIGGLTIDYSTGEVTLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFI---IDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDND--EDQKITYRIEEADREVFSIL--DIGDQGAILSVSGELKRQDHKVRVEISATDQG----GLQGRCVVNVFIDDVNSAPYFNDHPFSVKIPEHSP-IGYPVITLKAEDHDRGD-----NARIVYSIDSSQFFRIDPSSGDISVSSDLDREDRAT 749

HSP 2 Score: 113.235 bits (282), Expect = 4.668e-25
Identity = 161/610 (26.39%), Postives = 279/610 (45.74%), Query Frame = 3

Query:  390 VRDKNDNCPKLQNPIHLTMI-ESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSD-STYNVLRYSIEGPGQDLFLIEGPGIIRLLG-VLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYL--TDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEI 2183
            V D  DN P  +   +   I E A IG  +    A D DS  + +  Y L    +     L  I+ K   ++  + LD ET +     + A +   PK   TA+V +TV+D ND+ P++   S+ VTI EN      I  + ATD D  T   + YS+         I G  I    G V   E+++ K   +T  +     +Q  + S+T  +TI+V D+ND+ P +     + +++ENV     +G +   D DSG NG +   +   ED I   +S +       I T+   D E ++R S+K+   D G P L++S  + + +KD++DN   F KK +   + E    G+ +  ++AVD D    + Y +   D++  + +++  Q  ++  +    R+   ++K+ V +             ++   +D  ++ P F D  +S  + E   I + +  + AED D  +N  +VY+   +D  QF F +D   G I +   LD E +    +I+ A+D   P   +++T + V + D NDN P+F S  +   I      +    + V+  D D   N  + + L   + S  ++LFR+D  +G +
Sbjct:  260 VLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSL---GEGNGKNLLAINAKSGVIQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSG----IGGLTIDYSTGEVTLRERIDAKNSPITAVIRAKDGAQPAL-SSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGL-------IKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQ---DHKVRVEISAT-DQGGLQGRCVVNVFIDDVNSAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYS---IDSSQF-FRIDPSSGDISVSSDLDREDRATFSVIVTASDHASP-PLNTSTQIEVILDDINDNSPQFTSSSYAATIS-EDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTL 844

HSP 3 Score: 105.916 bits (263), Expect = 8.630e-23
Identity = 146/565 (25.84%), Postives = 252/565 (44.60%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQDLFLIEGPG----IIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFS--IDENVPRMY-LGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKD---LAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRL-YSFSVSERKEINFQIGKVNAEDPDLRNNGTV---VYTQQRLDEYQFPFFVDQLGKIRLFQR--LDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFK 2006
            + I V D ND+ P L      +T+ E+  IG ++    A+D DS  +    Y ++ + D       +ID     ++    LD ETT  ++ K+ A +   P    +  + V + D ND+ P +    + VTI E  P  +QI+ L A D+D    +  Y IE   +++F I   G    I+ + G L   K ++  + + +  TD G  Q         V + + DVN + P  Y  ++ FS  I E+ P  Y +  +   D D G N  +     Y  D         SS    DI  SS  D E  +  SV +  SD+  P L++S ++ + + D++DN+ +F    +A  + E   +GT   ++ A+D D      ++Y+L +      +    LDR +G +R +   DRE      + +  R++ +P+ + ++ + + + D+NDN P F++L Y   ++E   +   +G + A D D  +N  +   ++       +      +Q G +R+  R   DYE +       +    G     SST  V + V D NDN P  K
Sbjct:  465 LTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSED------FIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKI-TYRIEEADREVFSILDIGDQGAILSVSGEL---KRQDHKVRVEISATDQGGLQGRC-----VVNVFIDDVN-SAP--YFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARI----VYSIDSSQFFRIDPSSG---DISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQASSGQ---LSSTVPVRIHVSDVNDNKPALK 1001

HSP 4 Score: 97.0561 bits (240), Expect = 4.582e-20
Identity = 160/613 (26.10%), Postives = 272/613 (44.37%), Query Frame = 3

Query:  363 PKRK---QIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETT--TSHTCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSF----------DHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVK--FIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLE-YYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFP-----FFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNL 2120
            PKR+    +EI V D NDN P    +  ++T++E+  I   +   +A D D   + K  Y +   A S       ID    ++ L   +D + +  T+     +  +P    T  +T+ VID NDH P        +T+ EN     ++ ++ A D DS  N +++YS+EG  +D  + E  G+I+   +LD     E T   ++KVT   +   ++ ++T T+ + + D+NDN P    K    +I E +PR   G   +T     ++ D    + Y      + E+     +I DI    +           DH    +V V+I  +D G  +    V +F     +DD N    F    F+  + E   IG  +  ++A D D   +    Y  D     F  +D  +G +  +   DRE +  + + VT  +  SP    S  + + + DINDN P+F    Y+ ++SE   +     +V+A D D+  NG V Y    L+E         F +D+  G +R+  +LD E   +  L I A DRG P S S+ + + +++ D NDN P F+   +++ I  ++ V S     V  +  +  N  + F +
Sbjct:  353 PKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSM---ASSSGIGGLTIDYSTGEVTLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEG-SEDFIIDEDSGLIKTTKLLD----RETTARYSLKVTARDMGTPSLNTST-TIAVVLKDINDNAPTFDKKEYNVTISEEMPR---GSQIITL--KAVDNDEDQKITY-----RIEEADREVFSILDIGDQGAILSVSGELKRQDH----KVRVEISATDQGGLQGRCVVNVF-----IDDVNSAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQ--FFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYF---LNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTP-SLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRI 931

HSP 5 Score: 92.4337 bits (228), Expect = 1.195e-18
Identity = 115/409 (28.12%), Postives = 188/409 (45.97%), Query Frame = 3

Query:  426 NPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-----VLRYSIEGPGQDLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPED-KISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNN------VKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVT 1601
            +P  + + E + IG+ +   +A D+D   +++ VY +    DS +F    ID     + + S LD E   + +  + A +   P    +  + V + D ND+ P +T  S+  TI E+ P  T  +Q+SA D+D   N      L  S   P   LF ++   G +R+   LD E+     I L +   D G       SA   +T+++SDVNDN P     +    I EN P    +G +   DAD G N D+S  +    D K+   E     N +  I T + FD+E  +      + + +GQ  LSS+V + + + DV+DN       V  + +F    V   ++IG     I A D D  ++LEY+L ++ DL  +E ++ TG +   Q + R     +K  V+
Sbjct:  685 HPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI----DSSQF--FRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQF--AVIVLPIFARDRGTPS---LSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQASSGQ--LSSTVPVRIHVSDVNDNKPALKDFVILMNRF--DNVQMARQIGF----IPAFDPDQNATLEYFL-EENDL--IEAEKYTGKILVKQEWKRNMDVSFKTCVS 1071

HSP 6 Score: 71.633 bits (174), Expect = 2.574e-12
Identity = 119/511 (23.29%), Postives = 208/511 (40.70%), Query Frame = 3

Query:   90 EEESSVNDKGIRFNDIINVDGPRNKYHYSIVPESSVVSINQEGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLE--ACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLV--AYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELD---RQTGVVR--SNQVFDRETK 1577
            EE  ++ ++  R   I    GP     YS+      +     G+I+  +  DRE   +                  + + +    +   +      I + ++D NDN P   +   ++T+ E    G ++   +AVDND     K  Y ++  AD + F +  I ++   L +   L  +    H  ++E  A +        V    IDD +  P +    + V IPE++P    ++ L A D D   N  + YSI+      F I+   G I +   LD E  +  T  + V  +D+    S   + +  + + + D+NDN P     +   +I E++P       ++  DAD G NG V   +  +     I L     +S T+     SS  D E  + + + I   D G P LS++ E+ L + DV+DN   F +  +   + E   +G+ +  I A D D    + + + +    D    +++    Q GVVR  +   FD E K
Sbjct:  489 EENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGLIKTTKLLDRETTAR------------------YSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDE--DQKITYRIE-EADREVFSILDIGDQGAILSVSGELKRQ---DHKVRVEISATDQGGLQGRCVVNVFIDDVNSAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDS--SQFFRIDPSSGDISVSSDLDRE--DRATFSVIVTASDHA---SPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLR---VSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAK 965

HSP 7 Score: 55.0694 bits (131), Expect = 3.060e-7
Identity = 73/249 (29.32%), Postives = 114/249 (45.78%), Query Frame = 3

Query:  354 SNPP--KRKQIEICVRDKNDNCPKLQNPIHLTMI-ESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQD--LFLIE----GPGIIRLL--GVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFI 1055
            ++PP     QIE+ + D NDN P+  +  +   I E   +G       A+D D   +    Y L  ++ S   +L  +D     L + S LD E        + A +   P     + +T+T+ D ND+ P +  LS+ + I EN+P  + +  + A D+D   N  + + I G G D  LF IE      G++R+L     DYE    K  F  ++ +   LS      +T  V I VSDVNDN+P +
Sbjct:  760 ASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFG-GADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANK-FFFELQASSGQLS------STVPVRIHVSDVNDNKPAL 1000

[Close]

BLAST of Protocadherin 1 vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4])

HSP 1 Score: 111.309 bits (277), Expect = 1.966e-24
Identity = 127/496 (25.60%), Postives = 229/496 (46.17%), Query Frame = 3

Query:  720 HPPIWTVLSWQVTIPENTPSNTQIMQLSATDSD-STYNVLRYSIEGPGQDLFLIEGPGIIRLLG-VLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYL--TDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEI 2183
            + P++   S+ VTI EN      I  + ATD D  T   + YS+         I G  I    G V   E+++ K   +T  +     +Q  + S+T  +TI+V D+ND+ P +     + +++ENV     +G +   D DSG NG +   +   ED I   +S +       I T+   D E ++R S+K+   D G P L++S  + + +KD++DN   F KK +   + E    G+ +  ++AVD D    + Y +   D++  + +++  Q  ++  +    R+   ++K+ V +             ++   +D  ++ P F D  +S  + E   I + +  + AED D  +N  +VY+   +D  QF F +D   G I +   LD E +    +I+ A+D   P   +++T + V + D NDN P+F S  +   I      +    + V+  D D   N  + + L   + S  ++LFR+D  +G +
Sbjct:   12 NAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSG----IGGLTIDYSTGEVTLRERIDAKNSPITAVIRAKDGAQPAL-SSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGL-------IKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQ---DHKVRVEISAT-DQGGLQGRCVVNVFIDDVNSAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYS---IDSSQF-FRIDPSSGDISVSSDLDREDRATFSVIVTASDHASP-PLNTSTQIEVILDDINDNSPQFTSSSYAATIS-EDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTL 485

HSP 2 Score: 105.916 bits (263), Expect = 7.342e-23
Identity = 146/565 (25.84%), Postives = 252/565 (44.60%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQDLFLIEGPG----IIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFS--IDENVPRMY-LGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKD---LAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRL-YSFSVSERKEINFQIGKVNAEDPDLRNNGTV---VYTQQRLDEYQFPFFVDQLGKIRLFQR--LDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFK 2006
            + I V D ND+ P L      +T+ E+  IG ++    A+D DS  +    Y ++ + D       +ID     ++    LD ETT  ++ K+ A +   P    +  + V + D ND+ P +    + VTI E  P  +QI+ L A D+D    +  Y IE   +++F I   G    I+ + G L   K ++  + + +  TD G  Q         V + + DVN + P  Y  ++ FS  I E+ P  Y +  +   D D G N  +     Y  D         SS    DI  SS  D E  +  SV +  SD+  P L++S ++ + + D++DN+ +F    +A  + E   +GT   ++ A+D D      ++Y+L +      +    LDR +G +R +   DRE      + +  R++ +P+ + ++ + + + D+NDN P F++L Y   ++E   +   +G + A D D  +N  +   ++       +      +Q G +R+  R   DYE +       +    G     SST  V + V D NDN P  K
Sbjct:  106 LTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSED------FIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKIT-YRIEEADREVFSILDIGDQGAILSVSGEL---KRQDHKVRVEISATDQGGLQGRC-----VVNVFIDDVN-SAP--YFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARI----VYSIDSSQFFRIDPSSG---DISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQASSGQ---LSSTVPVRIHVSDVNDNKPALK 642

HSP 3 Score: 95.1301 bits (235), Expect = 1.461e-19
Identity = 152/576 (26.39%), Postives = 257/576 (44.62%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETT--TSHTCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSF----------DHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVK--FIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLE-YYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFP-----FFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIG 2033
            +EI V D NDN P    +  ++T++E+  I   +   +A D D   + K  Y +   A S       ID    ++ L   +D + +  T+     +  +P    T  +T+ VID NDH P        +T+ EN     ++ ++ A D DS  N +++YS+EG  +D  + E  G+I+   +LD     E T   ++KVT   +   ++ ++T T+ + + D+NDN P    K    +I E +PR   G   +T     ++ D    + Y      + E+     +I DI    +           DH    +V V+I  +D G  +    V +F     +DD N    F    F+  + E   IG  +  ++A D D   +    Y  D     F  +D  +G +  +   DRE +  + + VT  +  SP    S  + + + DINDN P+F    Y+ ++SE   +     +V+A D D+  NG V Y    L+E         F +D+  G +R+  +LD E   +  L I A DRG P S S+ + + +++ D NDN P F+   +++ I 
Sbjct:    2 VEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSM---ASSSGIGGLTIDYSTGEVTLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEG-SEDFIIDEDSGLIKTTKLLD----RETTARYSLKVTARDMGTPSLNTST-TIAVVLKDINDNAPTFDKKEYNVTISEEMPR---GSQIITL--KAVDNDEDQKITY-----RIEEADREVFSILDIGDQGAILSVSGELKRQDH----KVRVEISATDQGGLQGRCVVNVF-----IDDVNSAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQ--FFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYF---LNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTP-SLSAASEITLTLSDVNDNAPTFEQLSYDLYIA 543

HSP 4 Score: 92.4337 bits (228), Expect = 9.798e-19
Identity = 115/409 (28.12%), Postives = 188/409 (45.97%), Query Frame = 3

Query:  426 NPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-----VLRYSIEGPGQDLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPED-KISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNN------VKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVT 1601
            +P  + + E + IG+ +   +A D+D   +++ VY +    DS +F    ID     + + S LD E   + +  + A +   P    +  + V + D ND+ P +T  S+  TI E+ P  T  +Q+SA D+D   N      L  S   P   LF ++   G +R+   LD E+     I L +   D G       SA   +T+++SDVNDN P     +    I EN P    +G +   DAD G N D+S  +    D K+   E     N +  I T + FD+E  +      + + +GQ  LSS+V + + + DV+DN       V  + +F    V   ++IG     I A D D  ++LEY+L ++ DL  +E ++ TG +   Q + R     +K  V+
Sbjct:  326 HPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI----DSSQF--FRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQF--AVIVLPIFARDRGTPS---LSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQASSGQ--LSSTVPVRIHVSDVNDNKPALKDFVILMNRF--DNVQMARQIGF----IPAFDPDQNATLEYFL-EENDL--IEAEKYTGKILVKQEWKRNMDVSFKTCVS 712

HSP 5 Score: 86.6557 bits (213), Expect = 6.781e-17
Identity = 107/414 (25.85%), Postives = 187/414 (45.17%), Query Frame = 3

Query: 1011 VTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSR---VSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSS--LEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRL-YSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLI---IVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITM--DIDQQKTLT 2216
            V I+V DVNDN P     +   +I EN+     +  +  TD D G NG V   +A        S S +   TI       +    + ++   ++  I   D  QP LSS+V L + + D++D+    I       ++E   IG  + ++ A+D+DS  +  ++Y +   +D     +D  +G++++ ++ DRET   Y + VT R+  +P+   S  + + + DINDN P FD+  Y+ ++SE      QI  + A D D   +  + Y  +  D   F      +G       +  E++   H +   I ATD+G          V+   ID+ ++ P F    F + I  H+  I   +I +   D D  +     N ++V      + FRID  +G+I++  D+D++   T
Sbjct:    2 VEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMA--------SSSGIGGLTIDYSTGEVTLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFI---IDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDND--EDQKITYRIEEADREVFSIL--DIGDQGAILSVSGELKRQDHKVRVEISATDQG----GLQGRCVVNVFIDDVNSAPYFNDHPFSVKIPEHSP-IGYPVITLKAEDHDRGD-----NARIVYSIDSSQFFRIDPSSGDISVSSDLDREDRAT 390

HSP 6 Score: 71.2478 bits (173), Expect = 2.864e-12
Identity = 119/511 (23.29%), Postives = 208/511 (40.70%), Query Frame = 3

Query:   90 EEESSVNDKGIRFNDIINVDGPRNKYHYSIVPESSVVSINQEGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLE--ACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLV--AYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELD---RQTGVVR--SNQVFDRETK 1577
            EE  ++ ++  R   I    GP     YS+      +     G+I+  +  DRE   +                  + + +    +   +      I + ++D NDN P   +   ++T+ E    G ++   +AVDND     K  Y ++  AD + F +  I ++   L +   L  +    H  ++E  A +        V    IDD +  P +    + V IPE++P    ++ L A D D   N  + YSI+      F I+   G I +   LD E  +  T  + V  +D+    S   + +  + + + D+NDN P     +   +I E++P       ++  DAD G NG V   +  +     I L     +S T+     SS  D E  + + + I   D G P LS++ E+ L + DV+DN   F +  +   + E   +G+ +  I A D D    + + + +    D    +++    Q GVVR  +   FD E K
Sbjct:  130 EENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGLIKTTKLLDRETTAR------------------YSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDE--DQKITYRIE-EADREVFSILDIGDQGAILSVSGELKRQ---DHKVRVEISATDQGGLQGRCVVNVFIDDVNSAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDS--SQFFRIDPSSGDISVSSDLDRE--DRATFSVIVTASDHA---SPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLR---VSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAK 606

HSP 7 Score: 55.0694 bits (131), Expect = 3.042e-7
Identity = 73/249 (29.32%), Postives = 114/249 (45.78%), Query Frame = 3

Query:  354 SNPP--KRKQIEICVRDKNDNCPKLQNPIHLTMI-ESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQD--LFLIE----GPGIIRLL--GVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFI 1055
            ++PP     QIE+ + D NDN P+  +  +   I E   +G       A+D D   +    Y L  ++ S   +L  +D     L + S LD E        + A +   P     + +T+T+ D ND+ P +  LS+ + I EN+P  + +  + A D+D   N  + + I G G D  LF IE      G++R+L     DYE    K  F  ++ +   LS      +T  V I VSDVNDN+P +
Sbjct:  401 ASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFG-GADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANK-FFFELQASSGQLS------STVPVRIHVSDVNDNKPAL 641

[Close]

BLAST of Protocadherin 1 vs. Ensembl Celegans
Match: cdh-4 (Cadherin-4 [Source:UniProtKB/TrEMBL;Acc:A0A1C3NSI5])

HSP 1 Score: 94.7449 bits (234), Expect = 2.597e-19
Identity = 105/379 (27.70%), Postives = 167/379 (44.06%), Query Frame = 3

Query:  912 LDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-----RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDI----FTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVY-----TQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF 2003
            +DYEK  ++  F  + + DN       +     +T+ + ++NDNRP I  K    SIDEN+P     R Y+  +   DAD            + E K  + +       I DI          D E+    ++ +V SD    +      + + + D +DN   F K  ++  V E + IG  LA   A   D   ++EYYL      +FV L+ QTG++   +  D ET    K+ V  ++   P     A + I ++D NDN PKF++  Y   V E  +   ++  V A D D  + G V Y     ++   D    PF ++  G + + Q +DYE    ++L ++A D G P    S   + + V DEND+ P F
Sbjct: 2971 IDYEK-NQQLEFHRLTIQDNS------EVCKELITVVIENLNDNRPKIIEKLLKVSIDENLPTSEDARQYITRIVAEDAD------------FDEIKFRMVDDFGGLFQIDDINGVVTVVKPLDSEILGFFNLTVVASDG---EFEDKATILVTVIDQNDNAPTFEKSTYSMKVMESESIGYELAHFRASGGDQNETIEYYLKPSDVTSFVNLNAQTGILTLAKPLDFETLSALKLTVVAKDSGVPPLETEAQVEISVMDENDNAPKFEKEKYVGKVKENSKSGEKVLTVKALDVDSEHFGAVSYELEIVSETTTDTPVLPFAINSNGDVLISQSIDYEKIKKYNLKVIAKDGGRP-PLRSEALLEIHVEDENDHAPTF 3326

HSP 2 Score: 71.2478 bits (173), Expect = 3.892e-12
Identity = 104/416 (25.00%), Postives = 174/416 (41.83%), Query Frame = 3

Query:  372 KQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYD------LKCNADSKKFKLTMI---DNKFPQLELISSLDHETTTSHTCKLEAC----EPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRY---SIEGPGQDLFLI-EGPGIIRL---LGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDEN-VPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKDLAFVELDRQTGVV 1544
            K + I + D ND+ P      +  T I   K G  L   +A D D   + K VY       L+ NA++ +  L  +    N +P    + ++D     S    L         K        +    +N H P+++     V + E+ P  T + +L A D D+ YN  +RY    I G   ++  + E  G I +   L  L  EKLE   + L V   D G   + +KS+  T+ + + DVN++ P     +    I EN  P   +  +T  D D G NG +   +   ++K S+      +  +  +    S D E     +  I+ SD G P   S   L + ++DV+DN  K + +     + E    G F++ + A D+D    S L++ L  +K + F  +D  +G +
Sbjct:  476 KDVSIEILDSNDHAPVFSAKWMRQTPIVIGKPGDVLVKVDATDQDEGENGKIVYKFTSELPLEINANTGEITLVEVPKKGNSWPAT--VWAIDLGLPLSRMSALNLMFYKNGTKIPAKPKPIIIQESENKHSPVFSSFPEIVEVTEDAPIGTVVAKLQANDEDTGYNGFIRYVIHDIAGSSHEVLTVDEQSGEITVASDLSKLMKEKLEVLDVQLKVSAIDAG---TPVKSSVKTMKLRIKDVNNHSPQFDEVSYYLRISENEKPGKDIFKVTANDFDGGNNGKIKFSLGNNQEKSSVISIDAKTGIVKLL---KSLDREDQDVHTFAIIASDEGFPMRVSVTNLTISVEDVNDNPPKCVVQHSRARIPEDLPHGAFVSCMAAFDEDIGQNSKLKFLLNSEK-VPF-RIDHHSGCI 881

HSP 3 Score: 57.3806 bits (137), Expect = 6.759e-8
Identity = 127/536 (23.69%), Postives = 231/536 (43.10%), Query Frame = 3

Query:  726 PIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSI----EGPGQDLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFS-IDE-NVPRMYLGDMTVTDADSGINGDVS-CLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSV-KIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGK-------VNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXX-XXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMK----LFRIDNQTGEITMDIDQQKTLTCEKLPKLIELKIRVFD 2264
            P ++   +Q  + E     TQI  L A+        L +++    +   +D   +E   G + ++  LDYE    + I   V+V      Q+ +KS   T +++++D NDN P+ ++ +  F+ +DE +     L  +T  D D G NG V+  +V+  E+ +   ++K       ++  +   D E+    S+ +I   D+    L   + L +R  +      KF +K + T + +    GT +  + A+   + S   Y L  + +  F E+   +G V       +  K    +  T   + +  + D A ++ KI+  N + P F R +Y  ++ E       +         V+A D D  +NG V Y      + Q  F VDQ  G IR     D+E    +   + A D G P  RS   + ++V+VIDEND PP+F S   +I +          ++P T N      +  Q    + +  Y +K     F +D++TG++ +    + +     + KL +L++ V D
Sbjct: 1361 PKFSASHYQTDVSERVAVGTQIYTLKASGESLGTKPLVFNLFSVDDVAMEDKIRVEPSSGNVIVMEPLDYEA--ARRIRAVVQV-----QQANMKSF-ATFSVNINDENDNSPY-FVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG-----EVRLAKPLDPELQHVESILRIRAIDSAANSLKDEMSLHIRNSNEAPETAKFDRKVYQTTLYDSTRPGTPVLVLNALHHGTVS---YKL--EPNCTFFEVHTLSGAVHLATWLTK-LKHRKSVECTAIVESTEGQQDIAKVIAKIIRTNQHSPIFRRQVYRGTIRENMPTGSSVLSKSLLPLVVSAIDEDPGSNGLVGYRMLSPKDEQM-FSVDQYSGAIRTQMSFDFEKMKEYSFYVQAFDMGQPPRRSLMPSLIVVTVIDENDEPPRFPSNSLDISM----------ILP-TANGVSVGGQTAQDMDSVGSLRYFIKDQSVPFSVDSKTGDVLV----KDSNGISDMTKLFDLEVFVTD 1860

HSP 4 Score: 55.0694 bits (131), Expect = 3.014e-7
Identity = 89/391 (22.76%), Postives = 169/391 (43.22%), Query Frame = 3

Query:  888 GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGD----MTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKD-----LAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYS-FSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDI 2030
            G I +  VL+Y + +   I L V+        +T + A  T+T+SV D+ND  PF  +     SI E+      GD    ++ TD D     + S L        S+   + +      I  +   +H+    +S+ I  +D+  P   ++  + + I        +F    +   V E  ++G  + +++ ++ +    + + +    +     L F  ++R TG +      DRE K+++K+  T+R   +        + + I D+NDN P F   Y  F++SE   +   +   +A D D   +G + ++   ++E  +    +  G + +  +LD E    + LI  ATD G     ++     + V D ND+PP+F+   F ID+
Sbjct: 2457 GRIHVSRVLNYHRDKRYQIPLVVE-------DATGRRAFSTLTLSVIDINDKPPFFVLPFYSTSISESAKE---GDTVMMVSATDDDENDTIEYSLLDGSESQFFSVHPRQGT------ITVAKKLEHKAGVTLSLTIKATDSANPPHHATTTVEVNIASESVKVPRFSNSHYLFSVMEDADVGNVIGRVQQMETE-IDEIRFTIVPGSEESDSFLPF-SVERSTGKIIVKSSLDRERKNQWKM--TIRADAAGGVHAITTVTVDIGDVNDNAPAFHGDYERFTISEDAAVGTSVTIFSAMDRDDSPSGRIRFS--LVEENPYFDLNENSGWLTVASQLDREKIDHYKLIARATDEG---GFNTDLPFTIVVSDVNDSPPQFEKEEFNIDL 2822

HSP 5 Score: 53.9138 bits (128), Expect = 7.441e-7
Identity = 58/198 (29.29%), Postives = 86/198 (43.43%), Query Frame = 3

Query:  888 GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVT----DADSGINGDVSC-LVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS 1466
            GI+ L   LD+E L    + LTV   D+G+     ++    V ISV D NDN P    +  +  + EN      G+  +T    D DS   G VS  L    E          + N+  D+  S S D+E   + ++K++  D G+P L S   L + ++D +D+   F        V EG+ IG  L K    D D 
Sbjct: 3166 GILTLAKPLDFETL--SALKLTVVAKDSGVPPLETEAQ---VEISVMDENDNAPKFEKEKYVGKVKENSKS---GEKVLTVKALDVDSEHFGAVSYELEIVSETTTDTPVLPFAINSNGDVLISQSIDYEKIKKYNLKVIAKDGGRPPLRSEALLEIHVEDENDHAPTFDDCNMTALVQEGEAIGHRLLKFSVSDLDG 3355

HSP 6 Score: 53.1434 bits (126), Expect = 1.079e-6
Identity = 65/229 (28.38%), Postives = 105/229 (45.85%), Query Frame = 3

Query: 1347 IKDVDDNNVKFIKKFFATGVDE----GKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF-KSRY 2015
            I++++DN  K I+K     +DE     ++   ++ +I A D D    +++ + D     F ++D   GVV   +  D E    + + V   +       D A +L+ ++D NDN P F++  YS  V E + I +++    A   D   N T+ Y  +  D   F     Q G + L + LD+E      L +VA D G P   +     I  + DENDN PKF K +Y
Sbjct: 3001 IENLNDNRPKIIEKLLKVSIDENLPTSEDARQYITRIVAEDAD-FDEIKFRMVDDFGGLF-QIDDINGVVTVVKPLDSEILGFFNLTVVASDG---EFEDKATILVTVIDQNDNAPTFEKSTYSMKVMESESIGYELAHFRASGGD--QNETIEYYLKPSDVTSFVNLNAQTGILTLAKPLDFETLSALKLTVVAKDSGVPPLETEAQVEISVM-DENDNAPKFEKEKY 3221

HSP 7 Score: 53.1434 bits (126), Expect = 1.288e-6
Identity = 70/295 (23.73%), Postives = 128/295 (43.39%), Query Frame = 3

Query:  723 PPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEK---TIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMT--VTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKI 1592
            PP + +  +  +I E+      +M +SATD D   + + YS+    +  F    P   R   +   +KLE K   T+ LT+K TD   S +    AT TV ++++  +   P     + +FS+ E+     +G++   V   ++ I+     +V   E+  S     +  +T   I   SS D E  ++  + I     G     ++V +   I DV+DN   F   +    + E   +GT +    A+D+D + S     +  ++  + +L+  +G +      DRE  D YK+
Sbjct: 2502 PPFFVLPFYSTSISESAKEGDTVMMVSATDDDEN-DTIEYSLLDGSESQFFSVHP---RQGTITVAKKLEHKAGVTLSLTIKATD---SANPPHHATTTVEVNIASESVKVPRFSNSHYLFSVMEDAD---VGNVIGRVQQMETEIDEIRFTIVPGSEESDSFLPFSVERST-GKIIVKSSLDRERKNQWKMTIRADAAGGVHAITTVTV--DIGDVNDNAPAFHGDYERFTISEDAAVGTSVTIFSAMDRDDSPSGRIRFSLVEENPYFDLNENSGWLTVASQLDREKIDHYKL 2783

[Close]

BLAST of Protocadherin 1 vs. Ensembl Celegans
Match: cdh-1 (CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4W0])

HSP 1 Score: 87.8113 bits (216), Expect = 2.768e-17
Identity = 133/531 (25.05%), Postives = 226/531 (42.56%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQ-NPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNK-FPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQD--LFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVT-DNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPR---MYLGDMTVTDADSGINGDV--SCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            I I ++D NDN P    N  HLT+ E  K    L +  A D DS    +  Y +   ++S  F +  +  + F Q  L     H   ++     ++ E        V           P ++   +++   E+      I+   A  S    + ++YSI    QD    + E  G I +   LD +     T+ L ++ T  +G S  T       V I + D NDN P         SI E++      Y+  +  +D D   NG+V  S + ++P   I + +          + T S  D+E +    +++  +D G P  SS++ LF+ + DV+DN  +F K ++   V E     T + K+ A DKDS     + Y +T+  +  +  +D + G V + +  DRE      I++   +K  P ++ +A   I +LD+NDN P    +    V     ++  IG + A DPD   NG+V+Y  Q        F V   G + L ++L+   +    L ++ +D+G P
Sbjct:  627 ISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHIL--SESSSFSINPVTGEVFAQKPLARGRFHLVVSAKDGGGQSSENSANIHITVIDKDTKT----PQFSRSKYEIRTTED------ILPGIAIGSVGAMSKVKYSIYSGDQDHNFSIDEDTGKIYVTRYLDADV--HDTVLLNIQATLPSGESNQT------QVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYV--VQASDKDKKKNGEVRYSIISSHPGSSIEIDQFTG------QLSTGSLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITNGSE--YFGIDEKLGNVYTKRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPPSCLSITPIVVPAGSPLSTAIGTIVAMDPDKGLNGSVLYRAQLQSSL---FVVKSNGDVYLRRQLNASDERHQRLSVIVSDQGVP 1124

HSP 2 Score: 78.5666 bits (192), Expect = 2.131e-14
Identity = 117/444 (26.35%), Postives = 199/444 (44.82%), Query Frame = 3

Query:  723 PPIWTVLSWQVTIPENTPSNTQIMQLSATDSD-STYNVLRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENV-PRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCS--DNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVY---TQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDI 2030
            PP +    WQV IPE+TP  T ++++ A +S       +RYS++   + L +    G + +    D+EK  +K+   TV  T+     +  +++T  ++I + DVNDN P  Y      ++ E   P   L  ++ +D DSG  G+VS  +        LSES  SS +I  + T   F  +  +R    +V S  D G     +S  + + + D D    +F +  +     E    G  +  + A+ K     ++Y +          +D  TG +   +  D +  D   +N  ++      +++   ++I I D NDN P+F   L   S+ E  +++     V A D D + NG V Y   +       +   F  QL    L   LDYE    + L + ATD G P  RSS  T+ + V+D NDN P+F+  ++ +++
Sbjct:  537 PPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQDEHLTVDTMSGTVCIQKTFDFEK--QKSYQTTVIATN-----ANSETSTSLISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHI--------LSES--SSFSINPV-TGEVFAQKPLARGRFHLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSVGAMSK-----VKYSIYSGDQDHNFSIDEDTGKIYVTRYLDADVHDTVLLN--IQATLPSGESNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSSIEIDQFTGQLSTGSL---LDYEATRNYKLRVKATDLGIP-PRSSNMTLFIHVLDVNDNAPEFEKSWYTMEV 951

HSP 3 Score: 61.6178 bits (148), Expect = 2.634e-9
Identity = 116/467 (24.84%), Postives = 200/467 (42.83%), Query Frame = 3

Query:  837 RYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMT----VTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVS--VKIVCSDNGQPKLSSSVELFLRIKDVDDNN-----VKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFP--FFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDI 2195
            R+  +G      +    G I +L  LD E  +E    L + +TD G      ++ + TV ++V+D NDN+P   +  +  S  E      +GD+      +D D G NG  S  +        L +S  S + + +  T       +SS  S  +K+   D+G P L   VE  L I + +        ++F+K+ + + +DEG   G F+AK++       + L Y + +    +   +D + GV+R+N   DRE  + Y + V         +     + +++ ++NDN P F       V E   +   +  V A+D D  N   + Y        Q P  F +DQ  G I L   LD+E+ P H L I ATD        + T + + V D NDN P F    ++  +   T    +    +  +D D +   + ++L   + S    +FR+  ++G + M +
Sbjct: 1663 RFRFQGNAPKFSINSTTGSISVLP-LDREASQEH--LLIIILTDGGS-----RNDSCTVRVTVADQNDNKP--QLDASTPSELEIAESSRVGDVLHRFRASDMDIGQNGKFSFEL--------LEDSSGSLDLVPE--TGDLVLRRLSSLQSWKIKLRVVDHGVPGLY--VEKNLEISNRNPQTEAKAPLEFLKQTYLSTIDEGLPRGQFIAKLQP----ELAGLTYSIVEGNIDSAFSVDSE-GVIRTNLELDREILERYSLKVI---GTGSGQQIGTRVDVRVNNLNDNVPSFPMSKPRRVPENLRVGSYVATVGAKDVD--NLAPLRYFLVSDSSGQTPTHFNIDQFTGTIHLTAPLDFEVLPEHTLTIKATDGSF----DTFTNLTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAHDLDARG-ALTYSLGQGSSS----IFRVAPESGALFMKV 2088

HSP 4 Score: 51.9878 bits (123), Expect = 2.422e-6
Identity = 122/505 (24.16%), Postives = 197/505 (39.01%), Query Frame = 3

Query:  756 TIPENTPSNTQIMQLSATDSDST---YNVLRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDM----TVTDADSGINGDVSCLVAYP---EDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELD---RQTGVVRSN-QVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLY-----SFSVSERKEINFQIGKVNA----EDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRG-----HPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTD-TKNRQMQFNLQMVTPSYLMKLFRIDNQTGEI 2183
            T+PE+    T+I  +S    +S    Y V+ +  E   + L + E  G I  +  LDYEK   K   + VKV ++G         T  + + V D NDN P    +     I E      LG      TVTD D G   DV   V       +   L+  K++     D+  +   D E   +  + I   D G+P     +   + I D +DN   F +  +   V     IG+ L  ++A D D   +       KK  A    +    Q+GV+ +   +    T D   + V   +  SP+ + SA++ I +L    + P  D ++     S  + E   +   + +V+      D  LR  G+     Q+ D+      +       L   LD E    HHL  +    G     HP         ++++ D NDN P++ S    I +   T+  SR L   T  D D  +N  +++++         +L  ID +TG I
Sbjct:   30 TVPESAQIGTRIGWISGKREESAAPKYFVV-FPDEQTSKFLKVDERSGEISTIAHLDYEK-RSKFDIVAVKVEESG--------ETIDILVEVDDENDNAPSFADQVVKLEISEFA---QLGTSFALPTVTDGD-GPKFDVHRFVILQGNVNNVFKLASRKVNEQLQADLVVNGQLDREFRDKYELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSNSNFAISQSGVITTTASLLPASTHD---VIVVASDHGSPSLSSSAVVTITVLGSTLSSPPLDIIWLVESNSAHLMENSTLGSIVARVSIAQQYRDTKLRLIGSSALCPQQTDQAHVYLLL-------LCGILDRETASEHHLKFLLEKDGQIIIEHP--------QLLTIGDINDNAPQWHSSQIHISLN-RTQGGSRTL---TAKDPDLGQNGWIRYSV------LDTELVSIDKETGRI 492

HSP 5 Score: 51.9878 bits (123), Expect = 2.820e-6
Identity = 76/341 (22.29%), Postives = 143/341 (41.94%), Query Frame = 3

Query:  342 SIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRI 1349
            + + S    + Q+ I + D NDN P+  +  + +++ E  K+     + +A D D   + +  Y +  +      +   ID    QL   S LD+E T ++  +++A +   P       + + V+D ND+ P +    + + + EN+P  T + ++ A D DS  N  + Y I    +   + E  G +     +D E +    + +++   D G+     +S+T +  ISV DVNDN P       I     +     +G +   D D G+NG V         +  L  S     +  D++     +        + ++ SD G P+ S    + +RI
Sbjct:  811 ATLPSGESNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSSIE---IDQFTGQLSTGSLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITNGSEYFGIDEKLGNVYTKRSIDREVISH--VDISIVAEDKGVPP---RSSTASARISVLDVNDNPPSCLSITPIVVPAGSPLSTAIGTIVAMDPDKGLNGSVLY-------RAQLQSSLFVVKSNGDVYLRRQLNASDERHQRLSVIVSDQGVPRKSVVCHVPVRI 1136

[Close]

BLAST of Protocadherin 1 vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4])

HSP 1 Score: 78.5666 bits (192), Expect = 1.721e-14
Identity = 156/632 (24.68%), Postives = 259/632 (40.98%), Query Frame = 3

Query:  147 DGPRNKYHYSIVPESSVVSINQEGIIRFKRGTDREWLCKLTDLSASCHCKEAVC--KIPFGISIQENS------IVKSNPPKRK--QIEICVRDKNDNCPKLQNPIHLTMI-ESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIM-QLSATDSDSTYNVLR--YSIEGPGQDLFLIEG--PGIIRLLGVLDYEKLEE--KTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRP------FIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSES--KMSSNTIYDIFTSSSFDHEVSSRVS--VKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSS---LEYYLTDKKDLAFVELDRQT-----GVVRSNQVFDRE---TKDEYKINVTVREKFSPNKTDS-AXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATD 1922
            DGP+N+ HY IV E+     N E    F+          + +L+      E     KI   I   E S      +  +N P +   +++I + D NDN P  +   ++  + ES   G  +   +A D D   HS   Y L   A   +     +      + +   LD E +  +   L A + +   T  V + + D ND+ P +    +  T+ E      +++  + ATD+D      R  Y +EG G D     G   G I L+  LD +         F+   + D+G     +  A   V ++V D+NDN P      F YI+ N   I  +   +Y  D+   D D     + +       +K+   ES  ++  NT   IF   S D E+SS     +++  +D G P       + +++ D++DN   F K  +   V+E   IG  +    A D D  +      Y L+++ D  +V  D+ +     GV+R  Q  D E    +D + + + V    S  + D+ A + + ++D ND+ P         V E       IG+  A D D  +  T  +   R  + +  F +DQ G +R+   LD E   +++LII A D
Sbjct: 1249 DGPQNEVHYRIVGEA-----NGEETKHFR----------IDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDK--HSNLRYHL-IGAGGGRIPFG-VRTDSGTIFVKEPLDFEASDQYHLVLIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDG--NGLVGYAD--VQVNVRDINDNSPIFPERLFGYIEENREPIHSD--GVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNT-GKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRV----SDGRHDAEAAVHVALVDRNDHAPHIHGATEHRVREDVPRGTSIGRYTATDRDAGD--TARFRINRQSDPKRQFTIDQDGTLRVAHTLDREDIAVYNLIIEAYD 1848

HSP 2 Score: 63.5438 bits (153), Expect = 8.449e-10
Identity = 158/674 (23.44%), Postives = 281/674 (41.69%), Query Frame = 3

Query:  366 KRKQIEICVR--DKNDNCPKLQNPIHLTMIESAKIGFKLPLQE------AVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEA---CEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVT--IPENTPSNTQIMQLSATDSDS---TYNVL-RYSIEGPGQDLFLI-EGPGIIRLLGVLDYEKLEEKT--IFLTVKVTDNG---LSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGD------MTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSS---FDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS------TSSLEYYLT----DKKDLAFVEL-DRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNK-TDSAXXXXXXXXXXXXXPKF----DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVY-----------TQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYF------EIDIGCHT-RVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYL--MKLFRIDNQTGEI 2183
            +   +++ +R  D NDN P    P++     +A++   +PL +      AVD D+  +S+  Y +    D+  F +        ++ L +   +E    +   + A    EP    ++ +     ++ +      + + Q T  + E+    T ++Q+ A D+D    TY+ + +        +LF I E  G+++L   +    L E    I LTV V D+G   +  S   ++  T+ I + DVN+N+P          I + +   Y  D      +  TD DS  NGD+   + Y +   S S      +    + T S    FD E   R  V +  +D G   L    +  + + D++DN+ +F +  + T V   + +GT +  + A D D+      T SLE   T     + DL F EL +R++G +   +    +T+ ++  NV   +   P     SA + + +LD     PK+    D     +V E  E+N  I +  A       N  V+Y            + +  ++      ++  ++ + + LDYE    + L + ATD       +ST T +V V D ND  P+F    F      E+    H  +   + ++ V   DTD+   Q + + ++V  +     K FRID  TGEI
Sbjct:  622 RESHVDLTIRIDDVNDNVPTFTRPLY-----TAQVREDIPLNQTILKVTAVDKDTGDNSRITYSV----DNHNFSINSNGEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQ---SESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQ-KFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDM--TSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEI 1280

HSP 3 Score: 60.8474 bits (146), Expect = 4.784e-9
Identity = 130/538 (24.16%), Postives = 234/538 (43.49%), Query Frame = 3

Query:  744 SWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIE---GPGQ----DLFLIE----GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNI---FSIDENVP--RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKM-------SSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEG--------KEIGTFLAKIEAVDKDS---TSSLEYYL---TDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKF--------SPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFV-DQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDL-IP-------VTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITM 2189
            S++ ++       T ++ + A D+D+ +N  + YS+E     G+    DL   E      G I L+  +    ++ +     V   DNG+ ++   SA   VT++V D     P      +     ++DENV   ++ L    V+  DS  N DV   +       + +ESK        + N   ++      D+E  +  ++ +  +D    +++S+    + ++DV+D   +F    F   +DE         K  G  +  ++A+D DS    + + Y +    + ++     +D  TG +  N+ FDRE  D Y + V   ++          PNK D+  + I I D+NDN P F+ + Y   V E +     +  + A D D  +N  + Y        + PF V    G I + + LD+E    +HL+++A+D  H    ++TT V + + D NDN P+F+ + +       T VI  D+ IP        TD D D K+ ++ + L+        ++FRI   +G I +
Sbjct:  983 SYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPI---PMKTQKFIFNVIADDNGIPEALQSSAQ--VTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSR-NSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDM-TSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNK-DNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHSN--LRYHLIGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASDGRH----NATTNVYIHIEDVNDNAPQFEQQKYA------TTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGAD---EVFRIGKYSGTIEL 1497

[Close]

BLAST of Protocadherin 1 vs. Ensembl Fly
Match: ds (gene:FBgn0284247 transcript:FBtr0078045)

HSP 1 Score: 169.088 bits (427), Expect = 3.120e-42
Identity = 182/635 (28.66%), Postives = 317/635 (49.92%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNK----FPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSI---EGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRM--------YLGDMTVTDADSGIN-GDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYL--TDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDI----GCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEI 2183
            ++ + V+D+NDN P   Q  +H+   E+     K  L  A D D   ++   Y++     +  F+L+    +    +  L++   LD ETT  ++  +EA +   P       V +T+ D ND+ PI+    +  T+PEN    T ++Q+ A+D+D+  N ++ Y+I   +   + +F I+   G I +   LD+E  E   + +  K  D+G  +  +++ T  V+I V+DVNDN+P I   N IF  D+  P++        ++  ++V D DS     +V+  +   +   +L+      N+IY +      D E+ S  ++ +V +D G P L +S  +FLRI DV+DN  +F +  +   V E  + GT + ++ A D+D    S+L Y L  T +    + ++D QTG++ +    D ET+   ++ V  R+   P  + +A +L+ I D+NDN+P FD+  Y+ SV+E + +   I KV+A DPD   N  V YT     ++   F V    G+I +   LD+E +  +   ++ATDRG     S+T  + + + D NDN P F  R +++ +       ++  S  ++ V   D D  N   Q + ++V  +    +FRID  TGEI
Sbjct:  159 RVLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAK--DHG--EQPLET-TAFVSIRVTDVNDNQPTI---NVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALT---TRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRG---GLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFG-QVSYRIVAGNE-AGIFRIDRSTGEI 777

HSP 2 Score: 127.872 bits (320), Expect = 1.983e-29
Identity = 187/696 (26.87%), Postives = 303/696 (43.53%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKLQ-NPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPG--------------QDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPR-MYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIK-KFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKDL---AFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNA-EDP-DLRNNGT--------VVYTQQRL--DEYQFPFFVDQ-LGKIRLFQRLDYEIQPLHHLIIVATD-RGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRV--ISRDLIPVTDNDTDTKNRQMQFNLQMVTPSY------LMKLFRIDNQTGEITMD-----------------IDQQKTLTCEKLPKLIELKIRVFD 2264
            Q+ I V D NDN P+ + + + +++ ESA++G  L    A D DS    +  Y L   +    F    ID +   L L   LD+E++  HT  + A +   P       + V V D ND+PP++    + V + E+   N QI+Q++A+D D+  N  + Y I   G              Q   +    G I L   LD E  +     LTV  TDNG   +  K+    V + V D NDN P        F I+EN+ R   +G +T +D D G N  +   +      + ++ S        +I T    D E+     + +   D G P  S+ V + + + DV+DN  +    +     V E +  GT + ++ AVD+D    +S+ Y +   +D        +D  +GV+R+  V D E +  Y++ V   +  +P +    +L +++LD+NDN P F      F V E   +   +G ++  E P D+  N          V YT   L  D  +  F +D+  G + + + LD E+Q    L I A D       +SS  TV + V D NDN P++     ++ +   T V  I  +    TD DT T N  +Q+ L    P         M LFR+D+ TG +++                  +DQ   +T E+L   + +++R+ D
Sbjct:  916 QVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFA---IDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQ--LTVLATDNGTPAAHAKT---RVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSL------LPINSSFQVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFT-ATDADTGT-NGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVT-ERLQTSVTVRLRILD 1594

HSP 3 Score: 110.923 bits (276), Expect = 3.420e-24
Identity = 104/299 (34.78%), Postives = 158/299 (52.84%), Query Frame = 3

Query: 1236 FTSSSF--DHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTD-KKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTV-VYTQQRLD-EYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSR----YFEI--DIGCHTRVISRDLIPVTDNDTD 2090
             TSSSF   +   + + V +V      P L+S  EL + ++D +DN+ KF +K F   V EG   GTF+A++ A D D  S + L Y++ D   D AFV     +G+VR+N V DRE +D YK+ +   ++  P  T +A + ++I+D+NDN P F      +VSE  E+   I  ++A D D     T  +  +  +D E    F +D+  GK+ L +RLDYE+Q  + L ++A+D  H     + T + V V DENDN P F ++    YF I   I   +  +S D   +T N TD
Sbjct: 2273 LTSSSFALTNSQPNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNLVTVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAH----EARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATD 2567

HSP 4 Score: 103.605 bits (257), Expect = 5.163e-22
Identity = 125/452 (27.65%), Postives = 204/452 (45.13%), Query Frame = 3

Query:  723 PPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTY-NVLRYSI-EGPGQDLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPR-MYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQV------------------FDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPK 2000
            PPI+    +   + E+ P  T +  + A   D  + + +RYSI  G     F IE   G IR+   LD+E   +  + L ++ T   L +  +   T  V I V DVNDN P         S+ E+      L      D DSG +G V+  +     K   +    S + I     S   D+E S R ++ +  +D G P LS+++ + + ++DV+DN   F K  ++  V E + I   + ++ A D D+   + + Y + D        +D  T  + S+ V                   DRET+D Y++ V   +  +P       +++++LD NDNDPKF +  Y F + E       +G V A D DL  N  + Y+   ++     F V  + G+I   + LD E++ L+ L++ A D+G P  RS+   V + V D NDN P+
Sbjct:  824 PPIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEA--KSQVLLNIQAT---LGEPPVYGHT-QVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSGHLIL----SQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAG------VDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINS---SFQVHPVTGEISTREPLDRELRELYDLVVEARDQGTP-VRSARVPVRIHVSDVNDNAPE 1255

HSP 5 Score: 82.8037 bits (203), Expect = 1.436e-15
Identity = 110/429 (25.64%), Postives = 193/429 (44.99%), Query Frame = 3

Query: 1011 VTISVSDVNDNRPFIYIKNNIFSIDENVPR------MYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIY-DIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIK-KFFATGVDEGKEIGTFLAKIEAVDKDSTSS--LEYYL----TDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLY-----SFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFV--DQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLP 2231
            V ++V D NDN P     +      EN PR      +   D+ +   ++     VS  V    D   LS  +     +Y D+  S   D E +   S+ I   D G P L   + + + I+DV+DN   F + ++FAT V E   +GT + ++ A D D+  +  +EY +    +DK+ +    +D +TG +  N+  D ETK+ +++ V  ++        +A + I++ D+NDN P  + ++     S  +SE  +    + +++  DPD +     V       +  F      + +  + +   LD EI   + L +VATD+G P   +S +  +    D NDNPP+F+   +  ++          ++ V  +D D   N  + ++L   TP    + F+ID QTG IT     +  + CE  P
Sbjct:  160 VLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNV---NDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFAT-VPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQM--FRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRIT-DVNDNPPEFEQDLYHANV-MEVADPGTSVLQVLAHDRDEGLNSALTYSLAE-TPETHAQWFQIDPQTGLITT----RSHIDCETEP 575

HSP 6 Score: 80.8777 bits (198), Expect = 5.382e-15
Identity = 164/685 (23.94%), Postives = 276/685 (40.29%), Query Frame = 3

Query:  357 NPPKR--KQIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKL----PLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFP------QLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXX-----XXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDS------TYNVLRY-----SIEGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNN-------IFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNT-IYDIFTS---SSFDHEVSSRVSVKIVCSDNGQPK-LSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEA--VDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKT-----------------------DSAXXXXXXXXXXXXXPKF--DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVY--TQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFK-SRY---FEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEIT 2186
            NPP+   + + + V D NDN P    + +   + E A +G  +    P++   D       +S  DL+           +I+  F        L +   LD E  +    ++ A +    +    +   +       ND+ P W      + + E TP  T I   +ATD+D+       Y ++RY       +     LF ++   G + L   LD+E ++E    L V+  D   + +     + TV + + D ND+ P     N+       +F  D       +  +   D DSG NG ++  +     +      +++S T I ++  S   ++ D E   R ++ I   D+GQP+   SS+ L L ++   +N  +F++  +   + E    G+F+ ++ A  +     ++L Y +          +D Q G++ +   FDRE++  Y + V VR+    +                         D A + I + D+NDN P+F     Y  SV E  E    I  V A D D   N  ++Y  T   L      F +D        + LD E    + L I A+DRG P SR     + + V D+NDN P+FK S+Y    + D    T V+    I   D D    N ++ ++L   T       F ID Q+G IT
Sbjct: 1342 NPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQE--YLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGE---GRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGV-IHTVVASDLDEGPNADLIYSITGGNLGN---KFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQ---ISAVDADLGV-NARLVYSLANETQWQ----FAIDGQSGLIT 2009

HSP 7 Score: 79.7221 bits (195), Expect = 1.042e-14
Identity = 156/598 (26.09%), Postives = 254/598 (42.47%), Query Frame = 3

Query:  321 GISIQENSIVKSNPPKR--KQIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSH----TCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVL---SWQVTIPENTPSNTQIMQLSATDSDST--YNVLRYSIEGPGQDLFLIEGPGIIRLLGV---LDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPF----IYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVS-CLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDK-KDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQ-----IGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQ-LGKIRLFQ--RLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF-KSRY 2015
            G S+   ++    PP R    + I ++D NDN P   Q+    T+ E+A +G  +    A D D+  +    Y +     S K ++  ID +   + +  +LD ET   H      K    +P      V       +++ P I  +         I E+      + ++S  D DS   Y  +  ++ G      L      I L+ V   LD E +   T  L+V  TD G   +    A+ ++ + ++DVNDN P     +Y  N +   D   P   +  +   D D G+N  ++  L   PE      +    +  I    T S  D E      + +V  D G P LSS+  + + I DV+DN   F + F+   V E + +G  + K+ A D D    + + Y + +  K L   E+   +G +      D E +  Y+  V   ++   + T  A++ +++ D+NDN P F  R Y  S+ E  + + Q     I  V A DPD  N G V Y     +E    F +D+  G+I + +   L    QP+H L I ATD G+ +  ++   V +S+ID    PP F K+RY
Sbjct:  251 GYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAIN-RRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVIVHLPLDREIVSNYT--LSVVATDKG---TPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVAD---PGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLIT---TRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTT--AMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGI-FRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGN-LRSNADAVVFLSIIDAMQRPPIFEKARY 832

HSP 8 Score: 76.6406 bits (187), Expect = 1.034e-13
Identity = 179/691 (25.90%), Postives = 294/691 (42.55%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRY------SIEGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRP---------FIYIKNNIFSIDENVPRMY-LGDMTVTDADS-GINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVS--VKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSP------NKTDSAXXXXXXXXXXXXXPKFDRL--YSFSVSERKEINFQIGKVNAEDPDLRN--NGTVVY-TQQRLDEYQFPFFVDQL-GKIRLFQRLDYEI-QPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQM-VTPS--YLMKLFRIDNQTGEIT----MDIDQQKTLTCEKLP-----KLIELKIRV-------FDPTFTE 2279
            ++ I + D+NDN PK  Q     T+ E    G  +    A D+D+  +++  Y +        F +    +   +  ++  LD E    +  K+ A +   P+   TA + V ++D ND+ P +   +  VT+ E T     I  +SA D D TY  L Y      +++     +F ++   G + L   LDYE  +E    L V  +D      T+      +T+ V+D NDN P         +  I   I  I E++   + L  +  TDADS G N  V  ++   ++  S+      SN +  +   S     VSS     V+I+  D G+P L SS  L ++  D      +F++  +   + E   +G+ + ++     D + ++   +   ++ AF  L  Q+  +   +  DRE  D YK+ + +     P      N +    ++I ILD NDN P FDR   Y   +SE   + + I ++ A D D  N  N  VVY      DE+ F   +D + G + +  RLDY+     + LII A D  H     S     + + DENDN PKF    + +        +   +     +D D K    Q N  +   PS     K+FR+D+++G +T     D +Q++    E L      K   + +RV       F P FTE
Sbjct: 2307 ELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIV--LDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNL-VTVSEATELGAVITSISANDVD-TYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYE--LDVIASDAAHEARTV------LTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVH----PSNGVVSV-NMSRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQDALDQSLAI---IAGNEESAFELL--QSKAIVLVKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFT--IDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEY-VHFLAENEPVGSSVFRAHASDLD-KGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVEIESRDEFTPQFTE 2971

HSP 9 Score: 74.7146 bits (182), Expect = 4.250e-13
Identity = 154/610 (25.25%), Postives = 262/610 (42.95%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQ--NPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEAC---EPKCCXXX-XXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENV-PRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSS--SVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS-TSSLEYYLTDKKDLAFVELDRQTGVVRSNQV----FDR------------------------------------------------ETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQ---LGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF 2003
            I I V D NDN P+ +  +   L++ E+++ G  +    A D D   ++  +Y +       KF    ID+   +L     LD E  + +T +++A    +PK       +T+ V D ND+ P + +  +  ++ E+ P  T ++Q+SA D+D   N  L YS+    Q  F I+G  G+I  +G LD E L+    F+ V  TD G  +  ++SAT  V I+V D+NDNRP       I  +   + P   L  +   DAD G N ++  + +   +  ++S     + +   +  S S   E    + +++V  D G P  SS   +EL +         ++F  + +   + E    GT L ++ A+  D     +++      +   + LD  +G +R N+     +DR                                                   +E ++ +  R   +P     A L+I++ D NDN PKF  + +  +VSE       + +V+A D D  +N  + Y    +D      FV +    G +R    LD EI+ ++ L I+ATD G P   + T T+ V ++D NDN P F
Sbjct: 1833 IYITVGDVNDNSPEFRPGSCYGLSVPENSEPGV-IHTVVASDLDEGPNADLIYSITGGNLGNKFS---IDSSSGELS-ARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITTVGKLDRE-LQASYNFM-VLATDGG--RYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEI--VYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQSSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLLQVVALRSDGRRQKVQFSFGAGNEDGILSLDSLSGEIRVNKPHLLDYDRFSTPSMSALSRGRALHYEEEIDESSEEDPNNSTRSQRALTSSSFALTNSQPNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRY--HIVDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVP-QMTGTATIRVQIVDVNDNQPTF 2428

HSP 10 Score: 72.4034 bits (176), Expect = 2.140e-12
Identity = 168/659 (25.49%), Postives = 279/659 (42.34%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQ-NPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDL-KCNADSKKFKLTMIDNK-----FPQ---LELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIY-IKNNIFSI-DENVPRMYLGDMTVTDADSGINGDV--SCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDST---SSLEYYLTD----------KKDL--AFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSA--XXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQR----LDEYQFP----FFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXX--DENDNPPKFKS------RYFEIDIGCHTRV--ISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITM 2189
            I + V+D NDN P  + +   + + ES  I  ++    A D D+  +++  Y +     D+    ++  D       FP    + L + LD ET   +   + A +   P       V V V+D ND+ P +    ++  I EN    + +  ++A+D D   N  +RYS+        +    G I     LD E  E     L V+  D G   + ++SA   V I VSDVNDN P I   + ++ S+ +E  P   +  +   D D G N  +  S +     D   L     +S  I    T    DHE  S   + +  SD G P   +   L + + D++DN   F        V E   +G  +  I  +++ +    +S+E    D           KDL  A  ++DR +G +   ++ DRE + E+++ +   +  + N   S+   + I++ D+NDN P++ +      VSE   +   I    A D D   NG + Y   R    L+E Q      F +D L G + L   LD+E    + LI+ A D+   V+    T+V V +   D ND+ P F S      +   + I   TR+  +   ++ V ++  D  N Q+ +    +T       FRI++QTG I +
Sbjct: 1022 ILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTREPLDRELRELYD--LVVEARDQG---TPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIR---TRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGD--NGQLTYE---ITGGNGEGRFRINSQTGIIEL 1667

HSP 11 Score: 68.9366 bits (167), Expect = 2.048e-11
Identity = 171/680 (25.15%), Postives = 287/680 (42.21%), Query Frame = 3

Query:  318 FGISIQENSIVKSNPPKRKQI--EICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDL-----KCN-ADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXX------XXXXHPPIWTV------LSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIEG-PGQDLFLIEG-PGIIRLLGVLD--YEKLEEKTIF-LTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTS-SSFDHEVSSRVSVKIVCSD-NGQPKLSSSV----------------------ELFLRIKDVDDNNVKFIK-KFFATGVDEGKEIGTFLAKIEA-VDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSP-NKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDT-KNRQMQFNLQMVTPSYLMKLFRIDNQTGEIT 2186
            F + I+      SN P+   I  +I V D NDN P+  Q+PI L + E+  +G  +    A D D+  +    Y L     + N +  +   L  +D+    L L + LD E    +   ++A +     T  +  +V       D NDH P +         +  + I + T     +  + A D DS  N  L Y I G  G+  F I    GII L+  L    E +E+   F L +   D+G  Q   K ++  + + V   ++N P         +I ENVP    G   +      ++G  +  ++Y E    ++      +    I T+   FD E  +   + +   D N Q  LSSS                        +++ + DV+DN+ +F     +   V E  E G     + + +D+   + L Y +T         +D  +G + S +  DRE    Y + +   ++  P ++     + I + D NDN P+F    Y+ SV E   +   + +++A D DL  N  +VY+    +E Q+ F +D Q G I    +LD E+Q  ++ +++ATD G    RS+T  V ++V+D NDN P F+ RY  I          + L+ V   D D   N ++ ++L     +   K FRI+  TG ++
Sbjct: 1449 FRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHG--QPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPS---GSFVLQVTAKSLHGAENANLSY-EIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGEL-SARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLA--NETQWQFAIDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFE-RYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAK-FRINPSTGALS 2117

[Close]

BLAST of Protocadherin 1 vs. Ensembl Fly
Match: ds (gene:FBgn0284247 transcript:FBtr0343249)

HSP 1 Score: 169.088 bits (427), Expect = 3.120e-42
Identity = 182/635 (28.66%), Postives = 317/635 (49.92%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNK----FPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSI---EGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRM--------YLGDMTVTDADSGIN-GDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYL--TDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDI----GCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEI 2183
            ++ + V+D+NDN P   Q  +H+   E+     K  L  A D D   ++   Y++     +  F+L+    +    +  L++   LD ETT  ++  +EA +   P       V +T+ D ND+ PI+    +  T+PEN    T ++Q+ A+D+D+  N ++ Y+I   +   + +F I+   G I +   LD+E  E   + +  K  D+G  +  +++ T  V+I V+DVNDN+P I   N IF  D+  P++        ++  ++V D DS     +V+  +   +   +L+      N+IY +      D E+ S  ++ +V +D G P L +S  +FLRI DV+DN  +F +  +   V E  + GT + ++ A D+D    S+L Y L  T +    + ++D QTG++ +    D ET+   ++ V  R+   P  + +A +L+ I D+NDN+P FD+  Y+ SV+E + +   I KV+A DPD   N  V YT     ++   F V    G+I +   LD+E +  +   ++ATDRG     S+T  + + + D NDN P F  R +++ +       ++  S  ++ V   D D  N   Q + ++V  +    +FRID  TGEI
Sbjct:  159 RVLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAK--DHG--EQPLET-TAFVSIRVTDVNDNQPTI---NVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALT---TRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRG---GLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFG-QVSYRIVAGNE-AGIFRIDRSTGEI 777

HSP 2 Score: 127.872 bits (320), Expect = 1.983e-29
Identity = 187/696 (26.87%), Postives = 303/696 (43.53%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKLQ-NPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPG--------------QDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPR-MYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIK-KFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKDL---AFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNA-EDP-DLRNNGT--------VVYTQQRL--DEYQFPFFVDQ-LGKIRLFQRLDYEIQPLHHLIIVATD-RGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRV--ISRDLIPVTDNDTDTKNRQMQFNLQMVTPSY------LMKLFRIDNQTGEITMD-----------------IDQQKTLTCEKLPKLIELKIRVFD 2264
            Q+ I V D NDN P+ + + + +++ ESA++G  L    A D DS    +  Y L   +    F    ID +   L L   LD+E++  HT  + A +   P       + V V D ND+PP++    + V + E+   N QI+Q++A+D D+  N  + Y I   G              Q   +    G I L   LD E  +     LTV  TDNG   +  K+    V + V D NDN P        F I+EN+ R   +G +T +D D G N  +   +      + ++ S        +I T    D E+     + +   D G P  S+ V + + + DV+DN  +    +     V E +  GT + ++ AVD+D    +S+ Y +   +D        +D  +GV+R+  V D E +  Y++ V   +  +P +    +L +++LD+NDN P F      F V E   +   +G ++  E P D+  N          V YT   L  D  +  F +D+  G + + + LD E+Q    L I A D       +SS  TV + V D NDN P++     ++ +   T V  I  +    TD DT T N  +Q+ L    P         M LFR+D+ TG +++                  +DQ   +T E+L   + +++R+ D
Sbjct:  916 QVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFA---IDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQ--LTVLATDNGTPAAHAKT---RVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSL------LPINSSFQVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFT-ATDADTGT-NGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVT-ERLQTSVTVRLRILD 1594

HSP 3 Score: 110.923 bits (276), Expect = 3.420e-24
Identity = 104/299 (34.78%), Postives = 158/299 (52.84%), Query Frame = 3

Query: 1236 FTSSSF--DHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTD-KKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTV-VYTQQRLD-EYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSR----YFEI--DIGCHTRVISRDLIPVTDNDTD 2090
             TSSSF   +   + + V +V      P L+S  EL + ++D +DN+ KF +K F   V EG   GTF+A++ A D D  S + L Y++ D   D AFV     +G+VR+N V DRE +D YK+ +   ++  P  T +A + ++I+D+NDN P F      +VSE  E+   I  ++A D D     T  +  +  +D E    F +D+  GK+ L +RLDYE+Q  + L ++A+D  H     + T + V V DENDN P F ++    YF I   I   +  +S D   +T N TD
Sbjct: 2273 LTSSSFALTNSQPNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNLVTVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAH----EARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATD 2567

HSP 4 Score: 103.605 bits (257), Expect = 5.163e-22
Identity = 125/452 (27.65%), Postives = 204/452 (45.13%), Query Frame = 3

Query:  723 PPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTY-NVLRYSI-EGPGQDLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPR-MYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQV------------------FDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPK 2000
            PPI+    +   + E+ P  T +  + A   D  + + +RYSI  G     F IE   G IR+   LD+E   +  + L ++ T   L +  +   T  V I V DVNDN P         S+ E+      L      D DSG +G V+  +     K   +    S + I     S   D+E S R ++ +  +D G P LS+++ + + ++DV+DN   F K  ++  V E + I   + ++ A D D+   + + Y + D        +D  T  + S+ V                   DRET+D Y++ V   +  +P       +++++LD NDNDPKF +  Y F + E       +G V A D DL  N  + Y+   ++     F V  + G+I   + LD E++ L+ L++ A D+G P  RS+   V + V D NDN P+
Sbjct:  824 PPIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEA--KSQVLLNIQAT---LGEPPVYGHT-QVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSGHLIL----SQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAG------VDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINS---SFQVHPVTGEISTREPLDRELRELYDLVVEARDQGTP-VRSARVPVRIHVSDVNDNAPE 1255

HSP 5 Score: 82.8037 bits (203), Expect = 1.436e-15
Identity = 110/429 (25.64%), Postives = 193/429 (44.99%), Query Frame = 3

Query: 1011 VTISVSDVNDNRPFIYIKNNIFSIDENVPR------MYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIY-DIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIK-KFFATGVDEGKEIGTFLAKIEAVDKDSTSS--LEYYL----TDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLY-----SFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFV--DQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLP 2231
            V ++V D NDN P     +      EN PR      +   D+ +   ++     VS  V    D   LS  +     +Y D+  S   D E +   S+ I   D G P L   + + + I+DV+DN   F + ++FAT V E   +GT + ++ A D D+  +  +EY +    +DK+ +    +D +TG +  N+  D ETK+ +++ V  ++        +A + I++ D+NDN P  + ++     S  +SE  +    + +++  DPD +     V       +  F      + +  + +   LD EI   + L +VATD+G P   +S +  +    D NDNPP+F+   +  ++          ++ V  +D D   N  + ++L   TP    + F+ID QTG IT     +  + CE  P
Sbjct:  160 VLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNV---NDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFAT-VPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQM--FRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRIT-DVNDNPPEFEQDLYHANV-MEVADPGTSVLQVLAHDRDEGLNSALTYSLAE-TPETHAQWFQIDPQTGLITT----RSHIDCETEP 575

HSP 6 Score: 80.8777 bits (198), Expect = 5.382e-15
Identity = 164/685 (23.94%), Postives = 276/685 (40.29%), Query Frame = 3

Query:  357 NPPKR--KQIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKL----PLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFP------QLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXX-----XXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDS------TYNVLRY-----SIEGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNN-------IFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNT-IYDIFTS---SSFDHEVSSRVSVKIVCSDNGQPK-LSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEA--VDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKT-----------------------DSAXXXXXXXXXXXXXPKF--DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVY--TQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFK-SRY---FEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEIT 2186
            NPP+   + + + V D NDN P    + +   + E A +G  +    P++   D       +S  DL+           +I+  F        L +   LD E  +    ++ A +    +    +   +       ND+ P W      + + E TP  T I   +ATD+D+       Y ++RY       +     LF ++   G + L   LD+E ++E    L V+  D   + +     + TV + + D ND+ P     N+       +F  D       +  +   D DSG NG ++  +     +      +++S T I ++  S   ++ D E   R ++ I   D+GQP+   SS+ L L ++   +N  +F++  +   + E    G+F+ ++ A  +     ++L Y +          +D Q G++ +   FDRE++  Y + V VR+    +                         D A + I + D+NDN P+F     Y  SV E  E    I  V A D D   N  ++Y  T   L      F +D        + LD E    + L I A+DRG P SR     + + V D+NDN P+FK S+Y    + D    T V+    I   D D    N ++ ++L   T       F ID Q+G IT
Sbjct: 1342 NPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQE--YLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGE---GRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGV-IHTVVASDLDEGPNADLIYSITGGNLGN---KFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQ---ISAVDADLGV-NARLVYSLANETQWQ----FAIDGQSGLIT 2009

HSP 7 Score: 79.7221 bits (195), Expect = 1.042e-14
Identity = 156/598 (26.09%), Postives = 254/598 (42.47%), Query Frame = 3

Query:  321 GISIQENSIVKSNPPKR--KQIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSH----TCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVL---SWQVTIPENTPSNTQIMQLSATDSDST--YNVLRYSIEGPGQDLFLIEGPGIIRLLGV---LDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPF----IYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVS-CLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDK-KDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQ-----IGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQ-LGKIRLFQ--RLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF-KSRY 2015
            G S+   ++    PP R    + I ++D NDN P   Q+    T+ E+A +G  +    A D D+  +    Y +     S K ++  ID +   + +  +LD ET   H      K    +P      V       +++ P I  +         I E+      + ++S  D DS   Y  +  ++ G      L      I L+ V   LD E +   T  L+V  TD G   +    A+ ++ + ++DVNDN P     +Y  N +   D   P   +  +   D D G+N  ++  L   PE      +    +  I    T S  D E      + +V  D G P LSS+  + + I DV+DN   F + F+   V E + +G  + K+ A D D    + + Y + +  K L   E+   +G +      D E +  Y+  V   ++   + T  A++ +++ D+NDN P F  R Y  S+ E  + + Q     I  V A DPD  N G V Y     +E    F +D+  G+I + +   L    QP+H L I ATD G+ +  ++   V +S+ID    PP F K+RY
Sbjct:  251 GYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAIN-RRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVIVHLPLDREIVSNYT--LSVVATDKG---TPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVAD---PGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLIT---TRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTT--AMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGI-FRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGN-LRSNADAVVFLSIIDAMQRPPIFEKARY 832

HSP 8 Score: 76.6406 bits (187), Expect = 1.034e-13
Identity = 179/691 (25.90%), Postives = 294/691 (42.55%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRY------SIEGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRP---------FIYIKNNIFSIDENVPRMY-LGDMTVTDADS-GINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVS--VKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSP------NKTDSAXXXXXXXXXXXXXPKFDRL--YSFSVSERKEINFQIGKVNAEDPDLRN--NGTVVY-TQQRLDEYQFPFFVDQL-GKIRLFQRLDYEI-QPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQM-VTPS--YLMKLFRIDNQTGEIT----MDIDQQKTLTCEKLP-----KLIELKIRV-------FDPTFTE 2279
            ++ I + D+NDN PK  Q     T+ E    G  +    A D+D+  +++  Y +        F +    +   +  ++  LD E    +  K+ A +   P+   TA + V ++D ND+ P +   +  VT+ E T     I  +SA D D TY  L Y      +++     +F ++   G + L   LDYE  +E    L V  +D      T+      +T+ V+D NDN P         +  I   I  I E++   + L  +  TDADS G N  V  ++   ++  S+      SN +  +   S     VSS     V+I+  D G+P L SS  L ++  D      +F++  +   + E   +G+ + ++     D + ++   +   ++ AF  L  Q+  +   +  DRE  D YK+ + +     P      N +    ++I ILD NDN P FDR   Y   +SE   + + I ++ A D D  N  N  VVY      DE+ F   +D + G + +  RLDY+     + LII A D  H     S     + + DENDN PKF    + +        +   +     +D D K    Q N  +   PS     K+FR+D+++G +T     D +Q++    E L      K   + +RV       F P FTE
Sbjct: 2307 ELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIV--LDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNL-VTVSEATELGAVITSISANDVD-TYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYE--LDVIASDAAHEARTV------LTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVH----PSNGVVSV-NMSRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQDALDQSLAI---IAGNEESAFELL--QSKAIVLVKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFT--IDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEY-VHFLAENEPVGSSVFRAHASDLD-KGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVEIESRDEFTPQFTE 2971

HSP 9 Score: 74.7146 bits (182), Expect = 4.250e-13
Identity = 154/610 (25.25%), Postives = 262/610 (42.95%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQ--NPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEAC---EPKCCXXX-XXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENV-PRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSS--SVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS-TSSLEYYLTDKKDLAFVELDRQTGVVRSNQV----FDR------------------------------------------------ETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQ---LGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF 2003
            I I V D NDN P+ +  +   L++ E+++ G  +    A D D   ++  +Y +       KF    ID+   +L     LD E  + +T +++A    +PK       +T+ V D ND+ P + +  +  ++ E+ P  T ++Q+SA D+D   N  L YS+    Q  F I+G  G+I  +G LD E L+    F+ V  TD G  +  ++SAT  V I+V D+NDNRP       I  +   + P   L  +   DAD G N ++  + +   +  ++S     + +   +  S S   E    + +++V  D G P  SS   +EL +         ++F  + +   + E    GT L ++ A+  D     +++      +   + LD  +G +R N+     +DR                                                   +E ++ +  R   +P     A L+I++ D NDN PKF  + +  +VSE       + +V+A D D  +N  + Y    +D      FV +    G +R    LD EI+ ++ L I+ATD G P   + T T+ V ++D NDN P F
Sbjct: 1833 IYITVGDVNDNSPEFRPGSCYGLSVPENSEPGV-IHTVVASDLDEGPNADLIYSITGGNLGNKFS---IDSSSGELS-ARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITTVGKLDRE-LQASYNFM-VLATDGG--RYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEI--VYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQSSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLLQVVALRSDGRRQKVQFSFGAGNEDGILSLDSLSGEIRVNKPHLLDYDRFSTPSMSALSRGRALHYEEEIDESSEEDPNNSTRSQRALTSSSFALTNSQPNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRY--HIVDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVP-QMTGTATIRVQIVDVNDNQPTF 2428

HSP 10 Score: 72.4034 bits (176), Expect = 2.140e-12
Identity = 168/659 (25.49%), Postives = 279/659 (42.34%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQ-NPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDL-KCNADSKKFKLTMIDNK-----FPQ---LELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIY-IKNNIFSI-DENVPRMYLGDMTVTDADSGINGDV--SCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDST---SSLEYYLTD----------KKDL--AFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSA--XXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQR----LDEYQFP----FFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXX--DENDNPPKFKS------RYFEIDIGCHTRV--ISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITM 2189
            I + V+D NDN P  + +   + + ES  I  ++    A D D+  +++  Y +     D+    ++  D       FP    + L + LD ET   +   + A +   P       V V V+D ND+ P +    ++  I EN    + +  ++A+D D   N  +RYS+        +    G I     LD E  E     L V+  D G   + ++SA   V I VSDVNDN P I   + ++ S+ +E  P   +  +   D D G N  +  S +     D   L     +S  I    T    DHE  S   + +  SD G P   +   L + + D++DN   F        V E   +G  +  I  +++ +    +S+E    D           KDL  A  ++DR +G +   ++ DRE + E+++ +   +  + N   S+   + I++ D+NDN P++ +      VSE   +   I    A D D   NG + Y   R    L+E Q      F +D L G + L   LD+E    + LI+ A D+   V+    T+V V +   D ND+ P F S      +   + I   TR+  +   ++ V ++  D  N Q+ +    +T       FRI++QTG I +
Sbjct: 1022 ILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTREPLDRELRELYD--LVVEARDQG---TPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIR---TRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGD--NGQLTYE---ITGGNGEGRFRINSQTGIIEL 1667

HSP 11 Score: 68.9366 bits (167), Expect = 2.048e-11
Identity = 171/680 (25.15%), Postives = 287/680 (42.21%), Query Frame = 3

Query:  318 FGISIQENSIVKSNPPKRKQI--EICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDL-----KCN-ADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXX------XXXXHPPIWTV------LSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIEG-PGQDLFLIEG-PGIIRLLGVLD--YEKLEEKTIF-LTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTS-SSFDHEVSSRVSVKIVCSD-NGQPKLSSSV----------------------ELFLRIKDVDDNNVKFIK-KFFATGVDEGKEIGTFLAKIEA-VDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSP-NKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDT-KNRQMQFNLQMVTPSYLMKLFRIDNQTGEIT 2186
            F + I+      SN P+   I  +I V D NDN P+  Q+PI L + E+  +G  +    A D D+  +    Y L     + N +  +   L  +D+    L L + LD E    +   ++A +     T  +  +V       D NDH P +         +  + I + T     +  + A D DS  N  L Y I G  G+  F I    GII L+  L    E +E+   F L +   D+G  Q   K ++  + + V   ++N P         +I ENVP    G   +      ++G  +  ++Y E    ++      +    I T+   FD E  +   + +   D N Q  LSSS                        +++ + DV+DN+ +F     +   V E  E G     + + +D+   + L Y +T         +D  +G + S +  DRE    Y + +   ++  P ++     + I + D NDN P+F    Y+ SV E   +   + +++A D DL  N  +VY+    +E Q+ F +D Q G I    +LD E+Q  ++ +++ATD G    RS+T  V ++V+D NDN P F+ RY  I          + L+ V   D D   N ++ ++L     +   K FRI+  TG ++
Sbjct: 1449 FRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHG--QPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPS---GSFVLQVTAKSLHGAENANLSY-EIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGEL-SARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLA--NETQWQFAIDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFE-RYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAK-FRINPSTGALS 2117

[Close]

BLAST of Protocadherin 1 vs. Ensembl Fly
Match: ft (gene:FBgn0001075 transcript:FBtr0077478)

HSP 1 Score: 136.346 bits (342), Expect = 5.430e-32
Identity = 169/673 (25.11%), Postives = 305/673 (45.32%), Query Frame = 3

Query:  345 IVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKS-VYDLKCNADSKKFKLTMI-----DNKFPQLELISSLDHETTTSHTCKLEA---CEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLIEGPGIIRLLGVLD-------YEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIK-----NNIFSIDEN-VPRMYLGDMTVTDADSGINGDVSCLVAYPED--KISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFP--FFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVI--------SRDLIPVTDNDT-DTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLPKLI 2240
            ++ S P    ++ I V D NDN P+   P I ++  ESA  G +L L  A D D   +  +  Y++       KF+L        D  +  LE   +LD E+  S+   + A     P       V VT++D ND+PPI+    + V++ E     T ++ + A+D+D   N  + Y +        +    G+I     ++            +K+   TV   D+G   S  +     VT+++ D ND+ P I  +       + ++DEN V    +  + V D+DSG+NG  S  +    +     L E+      ++ +  +   D E   + ++ +V  D G P  +++  L + + DV+D+   F K  ++  + E    G+F+A I A D+D+   + + Y +    +L +  +D  TG++ +    DRE +D  +++++ R+     K     L + ILD ND  P+F  R  + ++ E       +  + A D D   NG+V +      E  +P  F +D L G++   + LD E    + + ++A D+G P  +S+T TV ++V D NDN P+F  R++   +      I         R L+ VT +D  D  N  +++ L+    S    LF++D ++G I++  D   ++  +   KL+
Sbjct:  131 VLSSQPTYPIEVRIKVLDVNDNSPEFPEPSIAISFSESATSGTRLLLDAATDADVGENGVTDQYEIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMASDNDLGDNSKITYYLAETEHQFTVNPETGVISTTERVNCPQQTNVKSSASQKSCVFTVFARDHG---SPRQDGRTYVTVNLLDTNDHDPIISFRFFPDGGKVATVDENAVNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGHFRLEEAA----DLHIVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSFVASITATDEDTGVNAQVHYDILSGNELKWFSMDPLTGLIVTTGPLDREIRDTVELSISARDGGPNPKFAYTQLKVIILDENDEAPQFSQREQNVTLGEDAPPQTIVALMTATDHDQGTNGSVTFALAPSVERLYPLQFALDALTGQLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYSLADDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYRLE----SGGEGLFQLDARSGAISLRGDAPASMHWKPHYKLL 792

HSP 2 Score: 117.087 bits (292), Expect = 3.970e-26
Identity = 173/641 (26.99%), Postives = 285/641 (44.46%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKL----QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYS-IEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPR-MYLGDMTVTDADSGINGDVSCLVA------------------YPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDS-AXXXXXXXXXXXXXPKFDRLYS-FSVSERKEINFQIGKVNAEDPDLRNNGTVVYT---QQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKS----RYFEIDIGCHTRVISRDLIPVTDNDTDTK-NRQMQFNLQMVTPSYLM-KLFRIDNQTGEI 2183
            + I + D NDN P      ++   +++ E+A +G ++ L    D D+ ++S+  Y L  N + ++F++  +         I +             +A  P       ++V + D NDH P++   S++ ++PE T  NT+   L+ATD D   N  + Y  IEG  + +F +   G + +   LD E  E     LTV   D G      +S+   V I V D NDN P        FSI EN P   ++G +T  D D G N ++S  ++                   P D+ +L   K+S N        S       + + ++   SDNG P+L   V++ + + DV+DN  +F++  +   + EG   GT +  +   D D      + Y L    +     LD  TG +   +  DRE+++ + + V  ++    +   S A + I +LD NDN P+F +  S  SV E      ++ +  A D D   N  VV++     R D     F +D + G + L + LDYE    + L I A+D G P S S+T    V V+D+NDNPP F S    R  +  I   T +++     VT +D D+  N ++ + +    P     + F I+ +TG I
Sbjct:  928 VNIAIIDLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSLTNNPN-QQFRIGPVTGVLYLQRPIRAEPGSLIHVELMATDAGSPPLSSKLSLSVLIADVNDHTPVFDHTSYETSLPETTKVNTRFFALAATDIDLGDNGRISYEIIEGNTERMFGVFPDGYLFVRAPLDRE--ERDYYALTVSCRDAGQPS---RSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLTAVDRDIGRNAELSFTLSSQTQDFTIDTRNGFIKTLRPFDREAL--VKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHITHVFTQDADEGLNGDVYYSLAKGNEAGQFNLDSATGQLSLGRRLDRESQEIHHLIVVAKDAALKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSISAGNRRDT----FHIDSITGSLYLHKPLDYEDITSYTLNITASDCGTP-SLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIPLKTPIVT-----VTADDPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGVI 1550

HSP 3 Score: 111.309 bits (277), Expect = 2.484e-24
Identity = 194/735 (26.39%), Postives = 311/735 (42.31%), Query Frame = 3

Query:  384 ICVRDKNDNCPKLQNPIH-LTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEA---CEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIEGPGQDL-FLIEGPGIIRLLGVLDYEKLEEKTIFLTVK------VTDNGLSQSTIK-------------------------SATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLV--AYPEDKISLSESKMSSN-TIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEA--VDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKT-DSAXXXXXXXXXXXXXPKF------DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEIT--MDIDQQKTLTCEKLPKLIELKIRVFDPTFTEFKDHCV-LKLKLSQFYIKTPSNDHQIQDTKGKFKEKSINEKEPPNVPNNQF 2429
            I V D NDN P  ++ ++   + E+A+ G+++    A D D   +++  Y +  +  +  F L   + +   L L + LD+E    +   ++A    +P    T  V   V+D ND+ PI+  +S+   + EN P  T+++ +SA D DS  N ++ YSI     D  F I+  G IR    LD E     T+ +T +       + + L ++ +K                         S+T  VTI + DVND  P ++I  N  +I ENV     +  +   D D G NG +  L+  A  ED         S N T   +    + D E+ S   + I   D G+P  S+  +L +RI D +DN+  F  K ++  V E   IG  + ++ A  VD+ +   + Y +          +   TGVVR  +  + E    Y + V   +    N   D+A L I ILDINDN P F       R+   +V         +   +A+ P L  N  V Y  +  D   F       G I L + LD E Q  + L +VA D G P   + T  V V V D NDN P F+ + +   +  +    +  L P   +  +  N +++FNL        M  F ID++TGEI+    +D+++T        +  L +   D + TE +   V L + +S            + D   KF   + N   P  +   +F
Sbjct: 1910 IQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDWANDVFSL---NPQTGMLTLTARLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIEYSITAGDVDSEFGIDSNGTIRTRRNLDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVP-VFISANETAIMENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPL--NSQVRYFLKEGDSDLFRINASS-GDIALLKPLDREQQSEYTLTLVAMDTGSP-PLTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNLL----GEHMHRFHIDSETGEISTATTLDREET-------SVYHLTLMAQDSSITEPRASSVNLTISVS-----------DVNDNIPKFDSTTYNVAVPERISKGEF 2614

HSP 4 Score: 110.923 bits (276), Expect = 3.317e-24
Identity = 151/584 (25.86%), Postives = 249/584 (42.64%), Query Frame = 3

Query:  201 SINQEGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSI-VKSNPPKRKQ--------------------IEICVRDKNDNCPKLQNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLK-------CNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEA---CEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQ--DLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDEN-VP--RMYLGDMTVTDADS-GINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVRE-KFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQF 1826
             I+  G IR +R  DRE     T    +  C +          ++E  + +K   P++ Q                    + I ++D ND  P   +     ++E+  I   +   +AVDND   +    Y +K         +D   F L   D    QL ++ +LD E  +S+   + A    EP     + + + ++D+ND+ P++    +  ++ EN      ++Q+SATD D   N  +RYSI    Q  D  + E  G++R+   L+YE+L   +  LTV+  D  L        T  +TI++ D+NDNRP       +  + EN VP    Y+  +   DAD+  +N  V   +   E    L     SS    DI      D E  S  ++ +V  D G P L+ +  + + ++D++DN+  F  + +   V E    GT +    A DKD    + L + L  +    F  +D +TG + +    DRE    Y + +  ++   +  +  S  L I + D+NDN PKFD   Y+ +V ER      +    A D D   N  V YT    D++ F
Sbjct: 2076 GIDSNGTIRTRRNLDREHRSTYTLTVTARDCADEFASFS---ELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFISANETAIMENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDG---QLRVVDALDRELRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRVAKNLNYERLSRYS--LTVRAEDCALENPA--GDTAELTINILDINDNRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLK--EGDSDLFRINASSG---DIALLKPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNLLGEHMHRF-HIDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERISKGEFVFGARALDLDDGENAVVHYTISGRDQHYF 2643

HSP 5 Score: 110.153 bits (274), Expect = 5.031e-24
Identity = 155/617 (25.12%), Postives = 273/617 (44.25%), Query Frame = 3

Query:  378 IEICVRDKNDNCP--KLQNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEA-----CEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIEGPGQDLFLIEG-PGII--RLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENV-PRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISR-DLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEI 2183
            + + V+D NDN P  +LQ+  H T+ E+   G  +    A D D  L++K    L+ N   +      ID++  ++   ++LD E T+ +   L A      EP+     +       ++ + P +   ++ V +PE       +    A D D   N V+ Y+I G  Q  F I    G++  +L      +  ++ T  + +   D G  QS    A  TV +   ++     F Y+ N+ F++ E+V P   +  ++ T    G+ G +   +A     I     ++  N+          D+E++    + I  +D   P L S   + L + D +DN     +  +   V E +     +A ++A D+DS    ++ Y L +  D  F E+  ++G + +    DRE   +Y   V   ++  P+ T +A +L+ +LD NDN PKF RL+S +V+E  EI   + +V + D DL  N    Y+       +F     Q G I +   LD E Q  + L +VA+D        + T + +++ D+NDN P+F+  ++        + I+    I  TD D    N  + ++LQ  +P     +F ID  TGE+
Sbjct: 2477 VRVEVQDINDNDPVFELQS-YHATVRENLPSGTHVLTPRATDKDEGLNAK----LRFNLLGEHMHRFHIDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVND-NIPKFDSTTYNVAVPERISKGEFVFGARALDLDDGENAVVHYTISGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQG-EQSLSSKAELTVILRPPELFPT--FAYMANSHFAMSEDVRPGKMITKVSATSPKKGLVGKIRYAIA---GGIMGDSLRVDPNSGLLSVGQDGLDYELTHLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNVIYRLQNDFDGTF-EI-TESGEIYTRMRLDREEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFTRLFSLNVTENAEIGSFVIRVTSSDLDLGANANASYSFSENPGEKF-RIEPQSGNITVAGHLDREQQDEYILKVVASDGAW----RAETPITITIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDRDKQGPNSVISYSLQQPSP-----MFSIDPATGEV 3069

HSP 6 Score: 100.908 bits (250), Expect = 4.350e-21
Identity = 117/451 (25.94%), Postives = 208/451 (46.12%), Query Frame = 3

Query:  720 HPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSI--EGPGQDLFLI-EGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDE-NVPRMYLGDMTVTDADSGINGDVS-CLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSS--VELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD---STSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF--DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQ-LGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDI 2030
            +PP++    +   IPEN P  T + Q  A D DS  N ++ Y+    GP +  F++ +  G I      DYE+    T+ +  K  D+ +       +   + + V  VN+  P        F + E +     +G +  TD DSG +G V   LV    DK      ++ +NT   I+ +   D E  +RV + ++  + G  + + +   ++ + I+D +D   +FIK ++ + + E   +GT +  ++A+DKD     +   Y + +       ++D QTG + +    DRE    Y + +   +   P +T SA + I++ D+NDN P F  + L  + +SE +     I  + A DPDL  NG     Q    +++    VD+  G +R     D E+ P+   II   D G P  + S   + ++V+D+NDNP   +S +  + +
Sbjct: 3330 NPPVFNHKEYHCYIPENKPVGTFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKNPDSSME------SYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSSNDK----GFRIDTNTGL-IYVARHLDRETQNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGNDPP-EFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKIDVQTGEISTASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGY-ISENEPAGTSIMTLIASDPDLPRNGGPFTYQLIGGKHKSWLSVDRNSGVVRSTTSFDREMTPILEAIIEVEDSGKP-KQKSQHLLTITVLDQNDNPSTTRSLHIAVSL 3766

HSP 7 Score: 95.9005 bits (237), Expect = 1.273e-19
Identity = 162/669 (24.22%), Postives = 292/669 (43.65%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQNPIH-LTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSI-EGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYL-GDMTVTDAD-SGINGDVSCLVAYPEDKISLSESKMSSNTIYDI-FTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQ-LGKIRLFQRLDYEIQPLHHLIIVATDRG-HPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDT-KNRQMQFNLQMVTPSYLMKLFRIDNQ-----TGEITMDIDQQKTLTCEKLPKLIELKIRVFDPTFTEFKDHCVLKLKLSQFY 2324
            I + V D NDN P ++  I+   ++E       + + +A D DS  +   +Y L+ + D   F++T     + ++ L    D E    +   +EA +   P    TA V + ++D ND+PP +T L + + + EN    + +++++++D D   N    YS  E PG+   +    G I + G LD E+ +E    L V  +D      T       +TI++ D NDN P        FS  E    + L G +  TD D  G N  +S  +  P    S+  +     +   + F  S +     +  ++ ++ +DNG+P L S   + + I D  +N  KF +  +   + +    G  + ++ A DK    T+ ++Y L      +   + R  G +   +         Y++ V   ++  P ++D   ++I +   N + P+F    Y   V E + +   I  V A D D   NG + Y+    +E Q  F VD+  G I + Q+LDY++   +HL I   D G HP   SS   + + + D NDNPP F  + +   I    + +   +      D D+ KN  + +      PS   + F I NQ     +  ++ D ++++  T       +++K +  D +   + +  V  L +++FY
Sbjct: 2796 ITLNVTDANDNAPVMEQLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNVIYRLQNDFDGT-FEITESGEIYTRMRL----DREEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFTRL-FSLNVTENAEIGSFVIRVTSSDLDLGANANASYSFSENPGEKFRIEPQSGNITVAGHLDREQQDE--YILKVVASDGAWRAET------PITITIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDRDKQGPNSVISYSLQQPSPMFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLYSECLVNINIVDAHNNPPKFEQAEYLAPLPQDAVRGQRIVRVHANDKQDLGTNEMDYSLMTFNLSSIFSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQSDETRVVIVVTGENMDTPRFSVNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISGGNERQ-DFSVDERTGGIVIQQQLDYDLIQEYHLNITVQDLGYHP--LSSVAMLTIILTDVNDNPPVFNHKEYHCYI-PENKPVGTFVFQAHAADKDSPKNAIIHYAF---LPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYT-------LQIKAKNPDSSMESYANLYVHVLGVNEFY 3436

HSP 8 Score: 95.9005 bits (237), Expect = 1.340e-19
Identity = 164/606 (27.06%), Postives = 281/606 (46.37%), Query Frame = 3

Query:  384 ICVRDKNDNCPKLQNPIHLTMIESAKIGFKLPLQE--AVDNDSPLHSKSVYDL-KCNADSKKFKLTMIDNKFPQLELISSLDHET------TTSHTCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPE---NTPSNTQIMQLSATDSDSTYN-VLRYSIEGPGQDLF-LIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNR---PFIYIKNNI-FSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDI-------FTSSSFDHEVSSR---VSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFV--DQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQM 2108
            + V D NDN P   +   +  I+   I  K P+    A D DS L+ K  Y + K      + +   I+ +   +  +  +D E+      T   T + +  E +     +VTV V D ND+ P++  ++  +  P+   +  S+T +MQ+ A D+DS+ N ++ Y I    Q+LF L    GII       ++  +E    LT+K TD  + QS  +S+   +TI       +    P    ++ +  S+ EN P +    +TVT   +      S  + Y    ++ + S+   + ++DI        T++  D E       V V  +    GQP+ +S  ++ + + D +D+  +F+   F   V E  +IG  ++ + A D D+  S+ + L D  D  F+ L+  TG +  N   DRETK +Y++ + V +     +   A   I++ D NDN P F D +YSF + E  +  +Q+G++ A D DL  N  + Y    + ++    F    Q G + L  RLDYE    + LI+ A D G P S S+T TV  +V+D NDN P F    +  ++      I+ +++ V+  D D+ N  +
Sbjct: 1477 VLVVDDNDNPPIFPSTAIVRQIKEG-IPLKTPIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGVIHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGSSTAVMQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGIITFTPGPQFK--QEVRYQLTLKSTDEAV-QSERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVYENEP-IGTSILTVTAHLA------SAEIEYFVTNVTATGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVEVYAIAL-GGQPR-TSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTISTLRAHDPDTLGSVTFLLMDGHDGKFL-LEPSTGKLILNDTLDRETKSKYELRIRVSDGV---QYTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGV--VSDWANDVFSLNPQTGMLTLTARLDYEEVQHYILIVQAQDNGQP-SLSTTITVYCNVLDLNDNAPIFDPMSYSSEV-FENVPIATEVVTVSAKDIDSGNNGL 2061

HSP 9 Score: 90.1225 bits (222), Expect = 8.679e-18
Identity = 141/564 (25.00%), Postives = 243/564 (43.09%), Query Frame = 3

Query:  723 PPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMY-LGDMTVTDADSGINGDVSCLVA--YPEDKISLS-ESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSS--LEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVRE------------------KF-SPNK-----------------TDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVY-TQQRLDEYQ-----FPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDL-IPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLPKLIELKIRVFD 2264
            PP +    +   + E+      I  L A D D+  +V    ++G      L    G + L   LD E   +    L ++V+D       ++      TI VSD NDN P        F I EN  R Y +G +   DAD G N  +S  V   +  D  SL+ ++ M       +  ++  D+E      + +   DNGQP LS+++ ++  + D++DN   F    +++ V E   I T +  + A D DS ++  +EY +T     +   +D   G +R+ +  DRE +  Y + VT R+                  K+ SP K                 + +  + I I D+ND  P F      ++ E   IN  +  V A D D   NG + Y  ++  DE        PF ++   G++R+   LD E++  + L I A DRG P  +S+ + +++ ++DENDN P F  + +   +  +  + +  L +  TD D +  N ++++++ +   ++    F I   TG + +     K L  E+L +   L +R  D
Sbjct: 1820 PPQFLDTPFVYNVSEDLQIGHTISTLRAHDPDTLGSVTFLLMDGHDGKFLLEPSTGKLILNDTLDRET--KSKYELRIRVSDG------VQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDWANDVFSLNPQTGM-------LTLTARLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIEYSITAGDVDSEFGID-SNGTIRTRRNLDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFISANETAIMENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSYLLNITARDRGEP-PQSTESQLLIRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVD-EGANGRIRYSIVLGDQNH---DFSISEDTGVVRV----AKNLNYERLSRY-SLTVRAED 2357

HSP 10 Score: 87.8113 bits (216), Expect = 3.823e-17
Identity = 110/432 (25.46%), Postives = 193/432 (44.68%), Query Frame = 3

Query:  948 LTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEY-YLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISR-DLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD--IDQQKTLT 2216
            L V+ TD G+     +S    V I V+  N + P   + +    + EN P    +  +  TD D+G NG +   ++   ++   S  + +      I      D+++     + I   D G   LSS   L + + DV+DN   F  K +   + E K +GTF+ +  A DKDS   + + Y +L    D  F  +++  G + S   FD E +  Y + +  +   S  ++  A L + +L +N+  P+F   ++ F VSE   +  ++G V A D D   +G V Y        +  F +D   G I + + LD E Q    L ++A + G      +    ++  I + ++PP+F   Y+   I     V ++   +   D D  T+N Q  ++   +    L + F+ID QTGEI+    +D+++T T
Sbjct: 3197 LVVRATDRGVPP---QSDETRVVIVVTGENMDTPRFSVNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISGGNERQDFSVDERTGG----IVIQQQLDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGTFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKNPDSSMES-YANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSSNDK-GFRIDTNTGLIYVARHLDRETQNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGNDPPEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYS---IINGNLKQSFKIDVQTGEISTASRLDREETST 3616

HSP 11 Score: 65.4698 bits (158), Expect = 2.840e-10
Identity = 103/411 (25.06%), Postives = 172/411 (41.85%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQN-PIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXXXXXHP--PIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQD-LFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFS-IDENVPRMYLGDMTVTDADSGINGDVSCL---VAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD---STSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRE 1571
            + I + D NDN P   +   H  + E+  +G  +    A D DSP ++   Y    +   + F +    N    +    S D+E    +T +++A  P     +   + V     +   P +    +   + E +   T++  + ATD DS  +  + Y + G   D  F I+   G+I +   LD E   +  + LTV   + G  +    +    V IS+ D ND  P  +IK+   S I E  P   +G    T     I+ DV       +Y     +L +S        +I T+S  D E +S  ++ I   D G P  + S  + + ++DV+DN   F  +     + E +  GT +  + A D D   +     Y L   K  +++ +DR +GVVRS   FDRE
Sbjct: 3320 LTIILTDVNDNPPVFNHKEYHCYIPENKPVGTFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSNG--TISSAVSFDYEERRIYTLQIKAKNPDSSMESYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSSNDKGFRIDTNTGLIYVARHLDRET--QNRVVLTVMAKNYGSIRGN-DTDEAQVIISIQDGND--PPEFIKHYYTSTISEAAP---VGTKVTTV--KAIDKDVRTQNNQFSYSIINGNLKQSFKIDVQTGEISTASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGYISENEPAGTSIMTLIASDPDLPRNGGPFTYQLIGGKHKSWLSVDRNSGVVRSTTSFDRE 3718

HSP 12 Score: 62.7734 bits (151), Expect = 1.777e-9
Identity = 90/369 (24.39%), Postives = 159/369 (43.09%), Query Frame = 3

Query:  747 WQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQD---LFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPR-MYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKK----DLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNK---TDSAXXXXXXXXXXXXXPKFDRLYS------FSVSERKEINFQIGKVNAEDPDLRNNGTVVY 1796
            + VTI E     T I  +   D+D   N   Y     G +     L    G + L   LD E  E   + +  K  D  L      S+  ++TI V D NDN P     ++  S+ E  P    L     +DAD G+N  V   ++    + +     ++ +    ++     D+E  +  ++ I  SD G P LS++V   + + D +DN   F        + EG  + T +  + A D DS     + Y ++ ++          ++ +TGV+ + +  DRE+ D +++ V   ++  P++   +   ++ + + DINDN P F  + +      FS S  K  +  + +V+A+D D  +NG V Y
Sbjct: 1283 YHVTISEGASEGTHITHVFTQDADEGLNGDVYYSLAKGNEAGQFNLDSATGQLSLGRRLDRESQEIHHLIVVAK--DAALKHPL--SSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSISAGNRRDTFHIDSITGS----LYLHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIPLKTPIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGVIHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTS--KGSSTAVMQVHAKDADSSSNGLVTY 1641

[Close]

BLAST of Protocadherin 1 vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0303223)

HSP 1 Score: 135.961 bits (341), Expect = 6.093e-32
Identity = 165/612 (26.96%), Postives = 275/612 (44.93%), Query Frame = 3

Query:  354 SNPPKRKQ--IEICVRDKNDNCPKLQ-NPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADS------KKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXXXXX------HPPIWTVLSWQVTIPENTPSNTQ---IMQLSATDSDSTYNV-LRYSIEGPG-QDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMY-LGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQT--GVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRL-YSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQF-------PFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTD 2090
            S PP+     +++ V D ND+ P  +      ++ E A +G  +    A D D   +++  Y ++   D       ++  +  ID++   +   SSLD ET+ S+   + A +     +   T T            + P ++  ++ V +PE+    T+   +  + ATD+D   N  +RY+I G   Q  F I+   G + L+  LDYE +  ++  L ++  D G   S  +S T  + ++V D NDN P  Y      S+ ENVP  Y +  +   D+D G N +++  ++  +D   L+    +      + T    D E   R + ++V  D G P  S+S  + + ++DV+DN+  F  K++   V E +  GT +  + A D D  S L Y +T         +  Q   G++   Q  D   K E +  +TV    S  ++D+A + I I D N+  P F+   YS SV E   +   +  V+A D D+  N  + Y+   L+E          PF ++ Q G I     LD E    + L + A D G+P S S TT V + V D NDN P FKS  ++  I     ++   +I V  +D D
Sbjct:  440 SFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESV--RSYRLVIRAQDGG---SPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGW----VQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLD--YKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYS---LNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNP-SLSDTTDVEIGVTDVNDNAPAFKSPLYQASI-LEDALVGTSVIQVAASDPD 1035

HSP 2 Score: 119.398 bits (298), Expect = 7.179e-27
Identity = 139/532 (26.13%), Postives = 250/532 (46.99%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIE-GPGQDLFLI---EGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIF----------TSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDK--KDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF--DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRL----FQRLDYE 1883
            Q+ + V D NDN P+   +    +++E+  +G+ +   +A D+D   +++  Y +    D+  F L  +D +   ++ I  LD E       ++ A +   P    ++ V +TV D ND+ P +    ++  + E+ P  T +  ++ATD D   + L Y I  G  +  F I    G G+I +   LDY+  +EK   LTV  TD+G      +S T TV I+++D N+  P         S+ E+ P    +  ++ TD+D G+N  ++          SL+E  ++     D F          T++  D E +S   + +   D G P LS + ++ + + DV+DN   F    +   + E   +GT + ++ A D D      ++Y L+D+  +D +FV +D  +G +R+N+  DRE+   + +     +K SP  + +  + I++ D+ND+ P F  D++ +  V E   +   +G+++A DPD   N  V Y+    D+      V + G  R        LDYE
Sbjct:  674 QLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN--FPLA-VDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDED-SRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYK--QEKRFLLTVAATDSGG-----RSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQIT---------YSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFV-IDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKI-TLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYE 1183

HSP 3 Score: 113.235 bits (282), Expect = 6.400e-25
Identity = 169/646 (26.16%), Postives = 284/646 (43.96%), Query Frame = 3

Query:  393 RDKNDNCPKLQNPIHL-TMIESAKIGFKLPLQEAVD-NDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIE------GPGQD----LFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDEN----VPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLE--YYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPD----LRNNGTVVYTQQRLDEYQFPFFVDQLGK--IRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDEN------DNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMK--LFRIDNQTGEITMD--IDQQKT 2210
            R+  +  P  +  +++ +++E    G  +    A D  DSP+    VY +    DS+   L  +D++   +   +SLD E    H  ++ A +   P    T  + V V+D NDH P +    ++ +I E     + ++ L ATD D   N  + Y IE      G  QD    +F I+   G+I     LD E     +  L V   D   +QS  ++AT +V + V D NDN P    +     + E+         +  +  TDAD G N  +   +     +   S   MS     D+      D+E      + I   D G P  S++ +L + + D +DN  +F    F   V E   +G  + +++A D D  ++ E  Y ++++ D   + +D +TG V++ +  DRE +  +   V  ++   P K+ S+ ++I + D+NDNDP F+ + Y  +V E +     +  V A DPD    L    T   T+ R           Q G+  I + Q LDY+ +    L + ATD G    RS T TV +++ D N      +N P   S + +  +G    V+S      TD+D    N Q+ ++L   + + L     F I+ QTG I  +  +D++ T
Sbjct:  350 RELRNQSPYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPV----VYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRET--SDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSG----DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFA------ITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG---GRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVS-----ATDSDVGV-NAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETT 970

HSP 4 Score: 77.0258 bits (188), Expect = 8.514e-14
Identity = 110/390 (28.21%), Postives = 170/390 (43.59%), Query Frame = 3

Query:  360 PPKRKQ--IEICVRDKNDNCPKLQNPIHLTMIESAKIGFKLPLQEAV--------DNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKC-CXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDS------TYNVLRYSIEGPGQ-DLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFS---IDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD 1463
            PPK     + I V+D NDN P   NP +      A +G   P    V        D DS LH    Y++       +F +T   N    + +  SLD++        + A +     DTA V + + D N+  PI+    +  ++ E+ P  T ++ +SATDSD       TY++   SI G G  D F I    G I     LD E        LTV   D G   +   S T  V I V+DVNDN P    K+ ++    +++ +    +  +  +D D G+NG +  L++   D+     S +   T   I T+   D E  +   +  +  D G P LSS+VE+ +R++DV+D+   F        V E   +G+ + +I A D D
Sbjct:  772 PPKSASSSVVITVQDVNDNDPAF-NPKYY----EANVGEDQPPGTPVTTVTATDPDEDSRLH----YEITTGNTRGRFAITS-QNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETT--SGYLLTVTAKDGG---NPSLSDTTDVEIGVTDVNDNAP--AFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLS---DRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPD 1141

HSP 5 Score: 53.9138 bits (128), Expect = 9.342e-7
Identity = 84/310 (27.10%), Postives = 129/310 (41.61%), Query Frame = 3

Query:  315 PFGISIQENSIVKSNPPKRKQ-----------------------IEICVRDKNDNCPKLQNPIH-LTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSH---TCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIEGPGQD---LFLIEGPGIIR--LLGV--LDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIF-SIDENVPRMYLGDMTVTDAD 1136
            PF I+ Q  +IV + P  R+                        +EI V D NDN P  ++P++  +++E A +G  +    A D D  L+ +  Y L  + D +     +ID     +     LD E+          ++   P    T  V + + D ND PP +      + +PEN+P  + + ++ A D D   N V+ YSI G G D     L+  PG  R  LL +  LDYE    K   L V+     L           + I V+DVNDN P +     IF +  ++ P   +G +   DAD
Sbjct:  949 PFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY-LLSDRDIEDGSF-VIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIG-GDDSNAFSLVTRPGSERAQLLTMTELDYESTR-KRFELVVRAASPPLRND------AHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEIGRIPAFDAD 1248

[Close]

BLAST of Protocadherin 1 vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0088214)

HSP 1 Score: 135.961 bits (341), Expect = 6.093e-32
Identity = 165/612 (26.96%), Postives = 275/612 (44.93%), Query Frame = 3

Query:  354 SNPPKRKQ--IEICVRDKNDNCPKLQ-NPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADS------KKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXXXXX------HPPIWTVLSWQVTIPENTPSNTQ---IMQLSATDSDSTYNV-LRYSIEGPG-QDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMY-LGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQT--GVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRL-YSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQF-------PFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTD 2090
            S PP+     +++ V D ND+ P  +      ++ E A +G  +    A D D   +++  Y ++   D       ++  +  ID++   +   SSLD ET+ S+   + A +     +   T T            + P ++  ++ V +PE+    T+   +  + ATD+D   N  +RY+I G   Q  F I+   G + L+  LDYE +  ++  L ++  D G   S  +S T  + ++V D NDN P  Y      S+ ENVP  Y +  +   D+D G N +++  ++  +D   L+    +      + T    D E   R + ++V  D G P  S+S  + + ++DV+DN+  F  K++   V E +  GT +  + A D D  S L Y +T         +  Q   G++   Q  D   K E +  +TV    S  ++D+A + I I D N+  P F+   YS SV E   +   +  V+A D D+  N  + Y+   L+E          PF ++ Q G I     LD E    + L + A D G+P S S TT V + V D NDN P FKS  ++  I     ++   +I V  +D D
Sbjct:  440 SFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESV--RSYRLVIRAQDGG---SPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGW----VQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLD--YKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYS---LNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNP-SLSDTTDVEIGVTDVNDNAPAFKSPLYQASI-LEDALVGTSVIQVAASDPD 1035

HSP 2 Score: 119.398 bits (298), Expect = 7.179e-27
Identity = 139/532 (26.13%), Postives = 250/532 (46.99%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIE-GPGQDLFLI---EGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIF----------TSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDK--KDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF--DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRL----FQRLDYE 1883
            Q+ + V D NDN P+   +    +++E+  +G+ +   +A D+D   +++  Y +    D+  F L  +D +   ++ I  LD E       ++ A +   P    ++ V +TV D ND+ P +    ++  + E+ P  T +  ++ATD D   + L Y I  G  +  F I    G G+I +   LDY+  +EK   LTV  TD+G      +S T TV I+++D N+  P         S+ E+ P    +  ++ TD+D G+N  ++          SL+E  ++     D F          T++  D E +S   + +   D G P LS + ++ + + DV+DN   F    +   + E   +GT + ++ A D D      ++Y L+D+  +D +FV +D  +G +R+N+  DRE+   + +     +K SP  + +  + I++ D+ND+ P F  D++ +  V E   +   +G+++A DPD   N  V Y+    D+      V + G  R        LDYE
Sbjct:  674 QLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN--FPLA-VDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDED-SRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYK--QEKRFLLTVAATDSGG-----RSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQIT---------YSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFV-IDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKI-TLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYE 1183

HSP 3 Score: 113.235 bits (282), Expect = 6.400e-25
Identity = 169/646 (26.16%), Postives = 284/646 (43.96%), Query Frame = 3

Query:  393 RDKNDNCPKLQNPIHL-TMIESAKIGFKLPLQEAVD-NDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIE------GPGQD----LFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDEN----VPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLE--YYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPD----LRNNGTVVYTQQRLDEYQFPFFVDQLGK--IRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDEN------DNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMK--LFRIDNQTGEITMD--IDQQKT 2210
            R+  +  P  +  +++ +++E    G  +    A D  DSP+    VY +    DS+   L  +D++   +   +SLD E    H  ++ A +   P    T  + V V+D NDH P +    ++ +I E     + ++ L ATD D   N  + Y IE      G  QD    +F I+   G+I     LD E     +  L V   D   +QS  ++AT +V + V D NDN P    +     + E+         +  +  TDAD G N  +   +     +   S   MS     D+      D+E      + I   D G P  S++ +L + + D +DN  +F    F   V E   +G  + +++A D D  ++ E  Y ++++ D   + +D +TG V++ +  DRE +  +   V  ++   P K+ S+ ++I + D+NDNDP F+ + Y  +V E +     +  V A DPD    L    T   T+ R           Q G+  I + Q LDY+ +    L + ATD G    RS T TV +++ D N      +N P   S + +  +G    V+S      TD+D    N Q+ ++L   + + L     F I+ QTG I  +  +D++ T
Sbjct:  350 RELRNQSPYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPV----VYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRET--SDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSG----DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFA------ITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG---GRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVS-----ATDSDVGV-NAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETT 970

HSP 4 Score: 77.0258 bits (188), Expect = 8.514e-14
Identity = 110/390 (28.21%), Postives = 170/390 (43.59%), Query Frame = 3

Query:  360 PPKRKQ--IEICVRDKNDNCPKLQNPIHLTMIESAKIGFKLPLQEAV--------DNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKC-CXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDS------TYNVLRYSIEGPGQ-DLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFS---IDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD 1463
            PPK     + I V+D NDN P   NP +      A +G   P    V        D DS LH    Y++       +F +T   N    + +  SLD++        + A +     DTA V + + D N+  PI+    +  ++ E+ P  T ++ +SATDSD       TY++   SI G G  D F I    G I     LD E        LTV   D G   +   S T  V I V+DVNDN P    K+ ++    +++ +    +  +  +D D G+NG +  L++   D+     S +   T   I T+   D E  +   +  +  D G P LSS+VE+ +R++DV+D+   F        V E   +G+ + +I A D D
Sbjct:  772 PPKSASSSVVITVQDVNDNDPAF-NPKYY----EANVGEDQPPGTPVTTVTATDPDEDSRLH----YEITTGNTRGRFAITS-QNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETT--SGYLLTVTAKDGG---NPSLSDTTDVEIGVTDVNDNAP--AFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLS---DRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPD 1141

HSP 5 Score: 53.9138 bits (128), Expect = 9.342e-7
Identity = 84/310 (27.10%), Postives = 129/310 (41.61%), Query Frame = 3

Query:  315 PFGISIQENSIVKSNPPKRKQ-----------------------IEICVRDKNDNCPKLQNPIH-LTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSH---TCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIEGPGQD---LFLIEGPGIIR--LLGV--LDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIF-SIDENVPRMYLGDMTVTDAD 1136
            PF I+ Q  +IV + P  R+                        +EI V D NDN P  ++P++  +++E A +G  +    A D D  L+ +  Y L  + D +     +ID     +     LD E+          ++   P    T  V + + D ND PP +      + +PEN+P  + + ++ A D D   N V+ YSI G G D     L+  PG  R  LL +  LDYE    K   L V+     L           + I V+DVNDN P +     IF +  ++ P   +G +   DAD
Sbjct:  949 PFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY-LLSDRDIEDGSF-VIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIG-GDDSNAFSLVTRPGSERAQLLTMTELDYESTR-KRFELVVRAASPPLRND------AHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEIGRIPAFDAD 1248

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BLAST of Protocadherin 1 vs. Ensembl Zebrafish
Match: pcdh2ab9 (protocadherin 2 alpha b 9 [Source:ZFIN;Acc:ZDB-GENE-041118-8])

HSP 1 Score: 162.925 bits (411), Expect = 1.303e-40
Identity = 179/617 (29.01%), Postives = 295/617 (47.81%), Query Frame = 3

Query:  192 SVVSINQ-EGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMID---NKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-----VLRYSIEGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIF-LTVKVTDNGLSQSTIKSATG-TVTISVSDVNDNRPFIYIKNNIFSID---ENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYL-----TDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKE----------INFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGH 1931
            S+ S+NQ +G++      DRE +C+          +   C I   I++Q       NP +   + + + D ND+ P+  ++   L + ESA  G + PLQ A D DS  +S   Y L  N   + F+L + D    K P L L   LD E        L A +   P    +  + + V+D ND+ P++T  ++ VT+ EN P  T ++Q++ATDSD   N      L  ++    + LF +    G I + G LDYE    K I+ + ++ +D G+    +  AT  +V I + DVNDN P I + +  FS D   ++ P   +  ++VTD DSG+NG +SC ++   D I       S + IY + TS   D E   +  + +V  D GQP LSS   + + I DV+DN+ +F    +A  V E    G  L  + A DKD+   S++ Y +      + K  +F+ ++ + G + + + FD ET   ++ ++   +  SP+ + +  + + ILD NDN P    LY  S +   E              + KV A D D+  NG ++++ Q + E+   F +D+  G+IR  +      +  H L+I+  D G+
Sbjct:   75 SMFSVNQNDGVLYVNGKIDREEVCE----------RSTPCLINLKIALQ-------NPLEIHYVTVEILDVNDHSPRFPEDEKRLEIWESAMPGARYPLQAARDPDSGANSVQTYKLSQN---EHFRLEIKDREDGKIPILILHKPLDREVMKHIKLILTASDGGRPPKSGSVEILIDVLDINDNVPVFTKETYTVTLNENAPVGTTVVQVNATDSDEGQNGQVVYALGNNVNDNLRKLFEVNSITGEIIVTGFLDYEI---KDIYEIDIQASDKGI----VPLATDKSVIIKIVDVNDNAPEIEVTS--FSSDIPEDSRPGTTVALISVTDLDSGLNGKISCSIS---DDIPFKLMSSSQDNIYSLVTSGLLDRETKFQYDITLVTKDLGQPSLSSVKTITVLISDVNDNSPEFTISPYAFYVMENNAPGKSLFSVSASDKDTGENSAVSYQIWRDGGAENKFTSFININSENGEIYALKSFDFETSKTFQFHILATDSGSPSLSSNVTVNVFILDQNDNVPVI--LYPVSANGSAEGVEEIPRNVNAGHLVTKVRAYDADIGYNGWLLFSLQEVSEHSL-FALDRYTGQIRTLRSFTETDEAQHKLVILVKDNGN 656

HSP 2 Score: 80.1073 bits (196), Expect = 9.225e-15
Identity = 121/443 (27.31%), Postives = 197/443 (44.47%), Query Frame = 3

Query:  912 LDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKM-SSNTIY-DIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRS---NQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQR--LDEYQFPFFVD---QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRD------LIPVTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEI 2183
            LD E ++   + LT   +D G      KS +  + I V D+NDN P    +    +++EN P    +  +  TD+D G NG V   +    + ++ +  K+   N+I  +I  +   D+E+     + I  SD G   L++   + ++I DV+DN  +     F++ + E    GT +A I   D DS  + +   +   D+ F  +      + S   + + DRETK +Y I +  ++   P+ +    + + I D+NDN P+F    Y+F V E       +  V+A D D   N  V Y   R    E +F  F++   + G+I   +  D+E        I+ATD G P S SS  TV V ++D+NDN P                 I R+      +  V   D D   N  + F+LQ V+      LF +D  TG+I
Sbjct:  201 LDREVMKHIKLILTA--SDGGRPP---KSGSVEILIDVLDINDNVPVFTKETYTVTLNENAPVGTTVVQVNATDSDEGQNGQVVYALG---NNVNDNLRKLFEVNSITGEIIVTGFLDYEIKDIYEIDIQASDKGIVPLATDKSVIIKIVDVNDNAPEIEVTSFSSDIPEDSRPGTTVALISVTDLDSGLNGKISCSISDDIPFKLMSSSQDNIYSLVTSGLLDRETKFQYDITLVTKDLGQPSLSSVKTITVLISDVNDNSPEFTISPYAFYVMENNAPGKSLFSVSASDKDTGENSAVSYQIWRDGGAENKFTSFININSENGEIYALKSFDFETSKTFQFHILATDSGSP-SLSSNVTVNVFILDQNDNVPVILYPVSANGSAEGVEEIPRNVNAGHLVTKVRAYDADIGYNGWLLFSLQEVSEH---SLFALDRYTGQI 631

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BLAST of Protocadherin 1 vs. Ensembl Zebrafish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1])

HSP 1 Score: 160.229 bits (404), Expect = 9.848e-40
Identity = 191/634 (30.13%), Postives = 306/634 (48.26%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIK------NNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF-----KSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            +I+I V+D NDN P   +P I++++ E+  I  +  +  A D D+  +S   Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN+P  T ++QL ATD+D   N  ++Y     +    + LF +    G+I +   LD E  E     LTV  +D   S      A  T+TI+V+DVNDN P I ++      N    + E  P    +  +TV+D D+ +NG V C +   E  +      +  N  Y + TS+  D+E +     KIV SD+G+P L+ +  + +R++D +DN   F +      V E      FL  I A D+DS  + E       + +F +LDR+TGV+ +++VFDRE ++ +   VT R+  +      A +++ ILD NDN PKF    + F VSE       +G +   D D   N  V  +    +E    F +D   G I+     D E Q  +   + A D G P   SS   V ++VID NDN P        + +  + +      +  ++  V D DT   N ++++    +    +  LFRID  TG IT++
Sbjct:  126 KIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL-LNGQSA-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDRE--ETAIHKLTVLASDGSSS-----PARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFI---EKDVPFHLKAVYDNQ-YLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVRLSILNDNEN---FILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSP-PCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSAIPGSVVAEVFAV-DGDTGM-NAELKYT---IVSGNVRSLFRIDPVTGNITLE 737

[Close]

BLAST of Protocadherin 1 vs. Ensembl Zebrafish
Match: CR847522.1 (pep chromosome:GRCz11:CHR_ALT_CTG6_1_1:4874141:4879379:1 gene:ENSDARG00000111493.1 transcript:ENSDART00000185190.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CR847522.1)

HSP 1 Score: 160.229 bits (404), Expect = 1.004e-39
Identity = 191/634 (30.13%), Postives = 306/634 (48.26%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIK------NNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF-----KSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            +I+I V+D NDN P   +P I++++ E+  I  +  +  A D D+  +S   Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN+P  T ++QL ATD+D   N  ++Y     +    + LF +    G+I +   LD E  E     LTV  +D   S      A  T+TI+V+DVNDN P I ++      N    + E  P    +  +TV+D D+ +NG V C +   E  +      +  N  Y + TS+  D+E +     KIV SD+G+P L+ +  + +R++D +DN   F +      V E      FL  I A D+DS  + E       + +F +LDR+TGV+ +++VFDRE ++ +   VT R+  +      A +++ ILD NDN PKF    + F VSE       +G +   D D   N  V  +    +E    F +D   G I+     D E Q  +   + A D G P   SS   V ++VID NDN P        + +  + +      +  ++  V D DT   N ++++    +    +  LFRID  TG IT++
Sbjct:  126 KIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL-LNGQSA-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDRE--ETAIHKLTVLASDGSSS-----PARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFI---EKDVPFHLKAVYDNQ-YLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVRLSILNDNEN---FILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSP-PCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSAIPGSVVAEVFAV-DGDTGM-NAELKYT---IVSGNVRSLFRIDPVTGNITLE 737

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BLAST of Protocadherin 1 vs. Ensembl Zebrafish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1])

HSP 1 Score: 160.229 bits (404), Expect = 1.215e-39
Identity = 191/634 (30.13%), Postives = 306/634 (48.26%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIK------NNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF-----KSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            +I+I V+D NDN P   +P I++++ E+  I  +  +  A D D+  +S   Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN+P  T ++QL ATD+D   N  ++Y     +    + LF +    G+I +   LD E  E     LTV  +D   S      A  T+TI+V+DVNDN P I ++      N    + E  P    +  +TV+D D+ +NG V C +   E  +      +  N  Y + TS+  D+E +     KIV SD+G+P L+ +  + +R++D +DN   F +      V E      FL  I A D+DS  + E       + +F +LDR+TGV+ +++VFDRE ++ +   VT R+  +      A +++ ILD NDN PKF    + F VSE       +G +   D D   N  V  +    +E    F +D   G I+     D E Q  +   + A D G P   SS   V ++VID NDN P        + +  + +      +  ++  V D DT   N ++++    +    +  LFRID  TG IT++
Sbjct:  126 KIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL-LNGQSA-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDRE--ETAIHKLTVLASDGSSS-----PARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFI---EKDVPFHLKAVYDNQ-YLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVRLSILNDNEN---FILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSP-PCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSAIPGSVVAEVFAV-DGDTGM-NAELKYT---IVSGNVRSLFRIDPVTGNITLE 737

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Query:  375 QIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIK------NNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF-----KSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            +I+I V+D NDN P   +P I++++ E+  I  +  +  A D D+  +S   Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN+P  T ++QL ATD+D   N  ++Y     +    + LF +    G+I +   LD E  E     LTV  +D   S      A  T+TI+V+DVNDN P I ++      N    + E  P    +  +TV+D D+ +NG V C +   E  +      +  N  Y + TS+  D+E +     KIV SD+G+P L+ +  + +R++D +DN   F +      V E      FL  I A D+DS  + E       + +F +LDR+TGV+ +++VFDRE ++ +   VT R+  +      A +++ ILD NDN PKF    + F VSE       +G +   D D   N  V  +    +E    F +D   G I+     D E Q  +   + A D G P   SS   V ++VID NDN P        + +  + +      +  ++  V D DT   N ++++    +    +  LFRID  TG IT++
Sbjct:  126 KIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL-LNGQSA-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDRE--ETAIHKLTVLASDGSSS-----PARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFI---EKDVPFHLKAVYDNQ-YLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVRLSILNDNEN---FILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSP-PCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSAIPGSVVAEVFAV-DGDTGM-NAELKYT---IVSGNVRSLFRIDPVTGNITLE 737

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BLAST of Protocadherin 1 vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220])

HSP 1 Score: 170.629 bits (431), Expect = 7.076e-43
Identity = 193/665 (29.02%), Postives = 319/665 (47.97%), Query Frame = 3

Query:  306 CKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKK-FKLTMI---DNKFPQLELISSLDHETTTSH--TCKLE-ACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQD----LFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKN--------NIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVA--YPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEY-YLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRL--DYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPP------KFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            C + F +S+ +   + S  P+    +I + D NDN P   +P I L++ E+  IG   P+  A D DS ++  S Y+L    +++  F L +    D K PQL ++  LD E   S+  T K++    P    +A++ ++++D ND+ P +  ++++  +PEN+P    ++Q+ A DSD   N  + YS           L L    G+I + G +D E +   T+  +V   D G   +  K+A   VTI++ D NDN+P I I+          + +I E+VP    +  + V+D D G+N  V+C+VA   P     +S++   S   Y + T+++ D+E     +++IV  D+G P LSS+  L +++ DV+DN   F +        E  +I   + ++ A D DS   S L Y  L D        ++  +G +R N V DRE ++ Y  +V   +K  P+   +A ++I +LD NDNDPKF    Y+FSV E       +G V   D D   N  +  +     E +   FV Q G   +   +  D E Q  +   + A D G P  RSS   V ++V+DENDN P          +Y        T V   + +   D DT   N ++ +++    P    +LF+I +  GE+T++
Sbjct:  141 CFLEFEVSMTD---LMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRLLHLDRSTGLITVQGPIDREDV--GTLKFSVVAKDKG---ANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSV----EPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDP-PRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPV---NWVRAEDMDTGI-NAELDYSIASGNP---FELFQISHNNGEVTLE 785

HSP 2 Score: 70.8626 bits (172), Expect = 8.227e-12
Identity = 118/547 (21.57%), Postives = 230/547 (42.05%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQNPIH-LTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTT----SHTCKLEACEPKCCXXXXXXXXXXXXXXHPPI----WTVLSWQ---VTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEG---PGQDLFLIEGPG-------IIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIY--IKNNIFSIDENVPRMYLGDMTVTDADSGINGDVS-CLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFS---VSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            + I + D NDN PK +   +   + E++ +G  +   +A D+D  ++++  Y     +D+ + +L  +D     + +   +D E       S   K +   PK   T V       +++ P I    + +++ Q     I E+ P  T +  +  +D D   N     +     P Q L  +   G        ++    LDYE ++E TI   +   D+G   +   S+T ++ + V+DVNDN P     +   +F  + ++  + + +++ TDADSG N  +   ++  P  +   S +  S      I  ++  D E        +V  D G P L  +  + + + D +DN+ KF+   +   V E     + +  +  +D D   +   +L+ + +     +   TG + S+  FDRE +  Y   +   +   P ++    + I +LD NDN P      + S   ++ +      +  V AED D   N  + Y+    + ++        G++ L + +  +   LH L++  TD+G P
Sbjct:  274 LRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVR-RLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQ-LKQVSDTGSDSKKKYFLQTTTALDYESVKEYTI--EIVAVDSG---NPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVM-EVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQ----IRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKP 808

[Close]

BLAST of Protocadherin 1 vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220])

HSP 1 Score: 170.244 bits (430), Expect = 9.246e-43
Identity = 193/665 (29.02%), Postives = 319/665 (47.97%), Query Frame = 3

Query:  306 CKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKK-FKLTMI---DNKFPQLELISSLDHETTTSH--TCKLE-ACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQD----LFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKN--------NIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVA--YPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEY-YLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRL--DYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPP------KFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            C + F +S+ +   + S  P+    +I + D NDN P   +P I L++ E+  IG   P+  A D DS ++  S Y+L    +++  F L +    D K PQL ++  LD E   S+  T K++    P    +A++ ++++D ND+ P +  ++++  +PEN+P    ++Q+ A DSD   N  + YS           L L    G+I + G +D E +   T+  +V   D G   +  K+A   VTI++ D NDN+P I I+          + +I E+VP    +  + V+D D G+N  V+C+VA   P     +S++   S   Y + T+++ D+E     +++IV  D+G P LSS+  L +++ DV+DN   F +        E  +I   + ++ A D DS   S L Y  L D        ++  +G +R N V DRE ++ Y  +V   +K  P+   +A ++I +LD NDNDPKF    Y+FSV E       +G V   D D   N  +  +     E +   FV Q G   +   +  D E Q  +   + A D G P  RSS   V ++V+DENDN P          +Y        T V   + +   D DT   N ++ +++    P    +LF+I +  GE+T++
Sbjct:  141 CFLEFEVSMTD---LMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRLLHLDRSTGLITVQGPIDREDV--GTLKFSVVAKDKG---ANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSV----EPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDP-PRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPV---NWVRAEDMDTGI-NAELDYSIASGNP---FELFQISHNNGEVTLE 785

HSP 2 Score: 70.4774 bits (171), Expect = 1.164e-11
Identity = 118/547 (21.57%), Postives = 230/547 (42.05%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQNPIH-LTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTT----SHTCKLEACEPKCCXXXXXXXXXXXXXXHPPI----WTVLSWQ---VTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEG---PGQDLFLIEGPG-------IIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIY--IKNNIFSIDENVPRMYLGDMTVTDADSGINGDVS-CLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFS---VSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            + I + D NDN PK +   +   + E++ +G  +   +A D+D  ++++  Y     +D+ + +L  +D     + +   +D E       S   K +   PK   T V       +++ P I    + +++ Q     I E+ P  T +  +  +D D   N     +     P Q L  +   G        ++    LDYE ++E TI   +   D+G   +   S+T ++ + V+DVNDN P     +   +F  + ++  + + +++ TDADSG N  +   ++  P  +   S +  S      I  ++  D E        +V  D G P L  +  + + + D +DN+ KF+   +   V E     + +  +  +D D   +   +L+ + +     +   TG + S+  FDRE +  Y   +   +   P ++    + I +LD NDN P      + S   ++ +      +  V AED D   N  + Y+    + ++        G++ L + +  +   LH L++  TD+G P
Sbjct:  274 LRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVR-RLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQ-LKQVSDTGSDSKKKYFLQTTTALDYESVKEYTI--EIVAVDSG---NPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVM-EVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQ----IRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKP 808

[Close]

BLAST of Protocadherin 1 vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220])

HSP 1 Score: 170.244 bits (430), Expect = 1.176e-42
Identity = 193/665 (29.02%), Postives = 319/665 (47.97%), Query Frame = 3

Query:  306 CKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKK-FKLTMI---DNKFPQLELISSLDHETTTSH--TCKLE-ACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQD----LFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKN--------NIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVA--YPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEY-YLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRL--DYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPP------KFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            C + F +S+ +   + S  P+    +I + D NDN P   +P I L++ E+  IG   P+  A D DS ++  S Y+L    +++  F L +    D K PQL ++  LD E   S+  T K++    P    +A++ ++++D ND+ P +  ++++  +PEN+P    ++Q+ A DSD   N  + YS           L L    G+I + G +D E +   T+  +V   D G   +  K+A   VTI++ D NDN+P I I+          + +I E+VP    +  + V+D D G+N  V+C+VA   P     +S++   S   Y + T+++ D+E     +++IV  D+G P LSS+  L +++ DV+DN   F +        E  +I   + ++ A D DS   S L Y  L D        ++  +G +R N V DRE ++ Y  +V   +K  P+   +A ++I +LD NDNDPKF    Y+FSV E       +G V   D D   N  +  +     E +   FV Q G   +   +  D E Q  +   + A D G P  RSS   V ++V+DENDN P          +Y        T V   + +   D DT   N ++ +++    P    +LF+I +  GE+T++
Sbjct:  133 CFLEFEVSMTD---LMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRLLHLDRSTGLITVQGPIDREDV--GTLKFSVVAKDKG---ANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSV----EPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDP-PRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPV---NWVRAEDMDTGI-NAELDYSIASGNP---FELFQISHNNGEVTLE 777

HSP 2 Score: 70.8626 bits (172), Expect = 9.409e-12
Identity = 118/547 (21.57%), Postives = 230/547 (42.05%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQNPIH-LTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTT----SHTCKLEACEPKCCXXXXXXXXXXXXXXHPPI----WTVLSWQ---VTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEG---PGQDLFLIEGPG-------IIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIY--IKNNIFSIDENVPRMYLGDMTVTDADSGINGDVS-CLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFS---VSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            + I + D NDN PK +   +   + E++ +G  +   +A D+D  ++++  Y     +D+ + +L  +D     + +   +D E       S   K +   PK   T V       +++ P I    + +++ Q     I E+ P  T +  +  +D D   N     +     P Q L  +   G        ++    LDYE ++E TI   +   D+G   +   S+T ++ + V+DVNDN P     +   +F  + ++  + + +++ TDADSG N  +   ++  P  +   S +  S      I  ++  D E        +V  D G P L  +  + + + D +DN+ KF+   +   V E     + +  +  +D D   +   +L+ + +     +   TG + S+  FDRE +  Y   +   +   P ++    + I +LD NDN P      + S   ++ +      +  V AED D   N  + Y+    + ++        G++ L + +  +   LH L++  TD+G P
Sbjct:  266 LRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVR-RLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQ-LKQVSDTGSDSKKKYFLQTTTALDYESVKEYTI--EIVAVDSG---NPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVM-EVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQ----IRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKP 800

[Close]

BLAST of Protocadherin 1 vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220])

HSP 1 Score: 170.244 bits (430), Expect = 1.271e-42
Identity = 193/665 (29.02%), Postives = 319/665 (47.97%), Query Frame = 3

Query:  306 CKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKK-FKLTMI---DNKFPQLELISSLDHETTTSH--TCKLE-ACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQD----LFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKN--------NIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVA--YPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEY-YLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRL--DYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPP------KFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            C + F +S+ +   + S  P+    +I + D NDN P   +P I L++ E+  IG   P+  A D DS ++  S Y+L    +++  F L +    D K PQL ++  LD E   S+  T K++    P    +A++ ++++D ND+ P +  ++++  +PEN+P    ++Q+ A DSD   N  + YS           L L    G+I + G +D E +   T+  +V   D G   +  K+A   VTI++ D NDN+P I I+          + +I E+VP    +  + V+D D G+N  V+C+VA   P     +S++   S   Y + T+++ D+E     +++IV  D+G P LSS+  L +++ DV+DN   F +        E  +I   + ++ A D DS   S L Y  L D        ++  +G +R N V DRE ++ Y  +V   +K  P+   +A ++I +LD NDNDPKF    Y+FSV E       +G V   D D   N  +  +     E +   FV Q G   +   +  D E Q  +   + A D G P  RSS   V ++V+DENDN P          +Y        T V   + +   D DT   N ++ +++    P    +LF+I +  GE+T++
Sbjct:  141 CFLEFEVSMTD---LMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRLLHLDRSTGLITVQGPIDREDV--GTLKFSVVAKDKG---ANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSV----EPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDP-PRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPV---NWVRAEDMDTGI-NAELDYSIASGNP---FELFQISHNNGEVTLE 785

HSP 2 Score: 70.4774 bits (171), Expect = 1.053e-11
Identity = 118/547 (21.57%), Postives = 230/547 (42.05%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQNPIH-LTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTT----SHTCKLEACEPKCCXXXXXXXXXXXXXXHPPI----WTVLSWQ---VTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEG---PGQDLFLIEGPG-------IIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIY--IKNNIFSIDENVPRMYLGDMTVTDADSGINGDVS-CLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFS---VSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            + I + D NDN PK +   +   + E++ +G  +   +A D+D  ++++  Y     +D+ + +L  +D     + +   +D E       S   K +   PK   T V       +++ P I    + +++ Q     I E+ P  T +  +  +D D   N     +     P Q L  +   G        ++    LDYE ++E TI   +   D+G   +   S+T ++ + V+DVNDN P     +   +F  + ++  + + +++ TDADSG N  +   ++  P  +   S +  S      I  ++  D E        +V  D G P L  +  + + + D +DN+ KF+   +   V E     + +  +  +D D   +   +L+ + +     +   TG + S+  FDRE +  Y   +   +   P ++    + I +LD NDN P      + S   ++ +      +  V AED D   N  + Y+    + ++        G++ L + +  +   LH L++  TD+G P
Sbjct:  274 LRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVR-RLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQ-LKQVSDTGSDSKKKYFLQTTTALDYESVKEYTI--EIVAVDSG---NPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVM-EVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQ----IRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKP 808

[Close]

BLAST of Protocadherin 1 vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220])

HSP 1 Score: 169.859 bits (429), Expect = 1.749e-42
Identity = 193/665 (29.02%), Postives = 319/665 (47.97%), Query Frame = 3

Query:  306 CKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKK-FKLTMI---DNKFPQLELISSLDHETTTSH--TCKLE-ACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQD----LFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKN--------NIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVA--YPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEY-YLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRL--DYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPP------KFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            C + F +S+ +   + S  P+    +I + D NDN P   +P I L++ E+  IG   P+  A D DS ++  S Y+L    +++  F L +    D K PQL ++  LD E   S+  T K++    P    +A++ ++++D ND+ P +  ++++  +PEN+P    ++Q+ A DSD   N  + YS           L L    G+I + G +D E +   T+  +V   D G   +  K+A   VTI++ D NDN+P I I+          + +I E+VP    +  + V+D D G+N  V+C+VA   P     +S++   S   Y + T+++ D+E     +++IV  D+G P LSS+  L +++ DV+DN   F +        E  +I   + ++ A D DS   S L Y  L D        ++  +G +R N V DRE ++ Y  +V   +K  P+   +A ++I +LD NDNDPKF    Y+FSV E       +G V   D D   N  +  +     E +   FV Q G   +   +  D E Q  +   + A D G P  RSS   V ++V+DENDN P          +Y        T V   + +   D DT   N ++ +++    P    +LF+I +  GE+T++
Sbjct:  141 CFLEFEVSMTD---LMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRLLHLDRSTGLITVQGPIDREDV--GTLKFSVVAKDKG---ANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSV----EPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDP-PRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPV---NWVRAEDMDTGI-NAELDYSIASGNP---FELFQISHNNGEVTLE 785

HSP 2 Score: 70.0922 bits (170), Expect = 1.682e-11
Identity = 118/547 (21.57%), Postives = 230/547 (42.05%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQNPIH-LTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTT----SHTCKLEACEPKCCXXXXXXXXXXXXXXHPPI----WTVLSWQ---VTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEG---PGQDLFLIEGPG-------IIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIY--IKNNIFSIDENVPRMYLGDMTVTDADSGINGDVS-CLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFS---VSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            + I + D NDN PK +   +   + E++ +G  +   +A D+D  ++++  Y     +D+ + +L  +D     + +   +D E       S   K +   PK   T V       +++ P I    + +++ Q     I E+ P  T +  +  +D D   N     +     P Q L  +   G        ++    LDYE ++E TI   +   D+G   +   S+T ++ + V+DVNDN P     +   +F  + ++  + + +++ TDADSG N  +   ++  P  +   S +  S      I  ++  D E        +V  D G P L  +  + + + D +DN+ KF+   +   V E     + +  +  +D D   +   +L+ + +     +   TG + S+  FDRE +  Y   +   +   P ++    + I +LD NDN P      + S   ++ +      +  V AED D   N  + Y+    + ++        G++ L + +  +   LH L++  TD+G P
Sbjct:  274 LRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVR-RLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQ-LKQVSDTGSDSKKKYFLQTTTALDYESVKEYTI--EIVAVDSG---NPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVM-EVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQ----IRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKP 808

[Close]

BLAST of Protocadherin 1 vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801])

HSP 1 Score: 172.555 bits (436), Expect = 1.863e-43
Identity = 206/683 (30.16%), Postives = 326/683 (47.73%), Query Frame = 3

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGD----------MTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIP------VTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            DRE LC     + + + +E  C     + I  N   +       +I+I V+D NDN P   +P I++++ E+  I  + P+  A D D+  +    Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN P  T ++QL ATD+D   N  +RY     +    + LF +    G+I +   LD E   E  I     +  +G S      A  TVTI+V+DVNDN P I ++  I  I+  V   YL +          +TV+D D+ +NG V C +   E ++      +  N  Y + TSS  D+E +   S KIV SD+G+P L+ +  + ++++D +DN   F +      V E    G +L  I A D+DS  + +       + +F +LDR+TGV+ +++VF+RE ++ +   VT R+  +P     A +++ +LD NDN PKF    + F VSE       +G +   D D   N  V  +    +E    F +D   G I+     D E Q  +   + ATD G P  RSST  V ++V+D NDN P   S           +++    IP      V   D DT  N ++++    +       LFRID  TG IT++
Sbjct:   93 DREKLC-----AGASYAEENECFFELEVVILPNDFFR-----LIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYEL-LNGQSV-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDRE---ETAIHKVTVLASDGSS----TPARATVTINVTDVNDNPPNIDLRYIISPINGTV---YLSEKDPVNTKIALITVSDKDTDVNGKVICFI---EREVPFHLKAVYDNQ-YLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDEDAGENKAVTLSILNDNEN---FVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQP-PRSSTAKVTINVMDVNDNSPVVISPPSNTSF----KLVPLSAIPGSVVAEVFAVDIDTGMNAELKY---TIVSGNNKGLFRIDPVTGNITLE 738

[Close]

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGD----------MTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIP------VTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            DRE LC     + + + +E  C     + I  N   +       +I+I V+D NDN P   +P I++++ E+  I  + P+  A D D+  +    Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN P  T ++QL ATD+D   N  +RY     +    + LF +    G+I +   LD E   E  I     +  +G S      A  TVTI+V+DVNDN P I ++  I  I+  V   YL +          +TV+D D+ +NG V C +   E ++      +  N  Y + TSS  D+E +   S KIV SD+G+P L+ +  + ++++D +DN   F +      V E    G +L  I A D+DS  + +       + +F +LDR+TGV+ +++VF+RE ++ +   VT R+  +P     A +++ +LD NDN PKF    + F VSE       +G +   D D   N  V  +    +E    F +D   G I+     D E Q  +   + ATD G P  RSST  V ++V+D NDN P   S           +++    IP      V   D DT  N ++++    +       LFRID  TG IT++
Sbjct:   93 DREKLC-----AGASYAEENECFFELEVVILPNDFFR-----LIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYEL-LNGQSV-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDRE---ETAIHKVTVLASDGSS----TPARATVTINVTDVNDNPPNIDLRYIISPINGTV---YLSEKDPVNTKIALITVSDKDTDVNGKVICFI---EREVPFHLKAVYDNQ-YLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDEDAGENKAVTLSILNDNEN---FVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQP-PRSSTAKVTINVMDVNDNSPVVISPPSNTSF----KLVPLSAIPGSVVAEVFAVDIDTGMNAELKY---TIVSGNNKGLFRIDPVTGNITLE 738

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Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGD----------MTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIP------VTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            DRE LC     + + + +E  C     + I  N   +       +I+I V+D NDN P   +P I++++ E+  I  + P+  A D D+  +    Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN P  T ++QL ATD+D   N  +RY     +    + LF +    G+I +   LD E   E  I     +  +G S      A  TVTI+V+DVNDN P I ++  I  I+  V   YL +          +TV+D D+ +NG V C +   E ++      +  N  Y + TSS  D+E +   S KIV SD+G+P L+ +  + ++++D +DN   F +      V E    G +L  I A D+DS  + +       + +F +LDR+TGV+ +++VF+RE ++ +   VT R+  +P     A +++ +LD NDN PKF    + F VSE       +G +   D D   N  V  +    +E    F +D   G I+     D E Q  +   + ATD G P  RSST  V ++V+D NDN P   S           +++    IP      V   D DT  N ++++    +       LFRID  TG IT++
Sbjct:   93 DREKLC-----AGASYAEENECFFELEVVILPNDFFR-----LIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYEL-LNGQSV-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDRE---ETAIHKVTVLASDGSS----TPARATVTINVTDVNDNPPNIDLRYIISPINGTV---YLSEKDPVNTKIALITVSDKDTDVNGKVICFI---EREVPFHLKAVYDNQ-YLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDEDAGENKAVTLSILNDNEN---FVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQP-PRSSTAKVTINVMDVNDNSPVVISPPSNTSF----KLVPLSAIPGSVVAEVFAVDIDTGMNAELKY---TIVSGNNKGLFRIDPVTGNITLE 738

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BLAST of Protocadherin 1 vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801])

HSP 1 Score: 172.17 bits (435), Expect = 2.070e-43
Identity = 206/683 (30.16%), Postives = 326/683 (47.73%), Query Frame = 3

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGD----------MTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIP------VTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            DRE LC     + + + +E  C     + I  N   +       +I+I V+D NDN P   +P I++++ E+  I  + P+  A D D+  +    Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN P  T ++QL ATD+D   N  +RY     +    + LF +    G+I +   LD E   E  I     +  +G S      A  TVTI+V+DVNDN P I ++  I  I+  V   YL +          +TV+D D+ +NG V C +   E ++      +  N  Y + TSS  D+E +   S KIV SD+G+P L+ +  + ++++D +DN   F +      V E    G +L  I A D+DS  + +       + +F +LDR+TGV+ +++VF+RE ++ +   VT R+  +P     A +++ +LD NDN PKF    + F VSE       +G +   D D   N  V  +    +E    F +D   G I+     D E Q  +   + ATD G P  RSST  V ++V+D NDN P   S           +++    IP      V   D DT  N ++++    +       LFRID  TG IT++
Sbjct:   93 DREKLC-----AGASYAEENECFFELEVVILPNDFFR-----LIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYEL-LNGQSV-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDRE---ETAIHKVTVLASDGSS----TPARATVTINVTDVNDNPPNIDLRYIISPINGTV---YLSEKDPVNTKIALITVSDKDTDVNGKVICFI---EREVPFHLKAVYDNQ-YLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDEDAGENKAVTLSILNDNEN---FVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQP-PRSSTAKVTINVMDVNDNSPVVISPPSNTSF----KLVPLSAIPGSVVAEVFAVDIDTGMNAELKY---TIVSGNNKGLFRIDPVTGNITLE 738

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BLAST of Protocadherin 1 vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801])

HSP 1 Score: 171.014 bits (432), Expect = 2.681e-43
Identity = 204/682 (29.91%), Postives = 327/682 (47.95%), Query Frame = 3

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGD----------MTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKS-----RYFEIDIGCHTRVISRDLIPVTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            DRE LC     + + + +E  C     + I  N   +       +I+I V+D NDN P   +P I++++ E+  I  + P+  A D D+  +    Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN P  T ++QL ATD+D   N  +RY     +    + LF +    G+I +   LD E   E  I     +  +G S      A  TVTI+V+DVNDN P I ++  I  I+  V   YL +          +TV+D D+ +NG V C +   E ++      +  N  Y + TSS  D+E +   S KIV SD+G+P L+ +  + ++++D +DN   F +      V E    G +L  I A D+DS  + +       + +F +LDR+TGV+ +++VF+RE ++ +   VT R+  +P     A +++ +LD NDN PKF    + F VSE       +G +   D D   N  V  +    +E    F +D   G I+     D E Q  +   + ATD G P  RSST  V ++V+D NDN P   S      +  + +      +  ++  V   D DT  N ++++    +       LFRID  TG IT++
Sbjct:   93 DREKLC-----AGASYAEENECFFELEVVILPNDFFR-----LIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYEL-LNGQSV-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDRE---ETAIHKVTVLASDGSS----TPARATVTINVTDVNDNPPNIDLRYIISPINGTV---YLSEKDPVNTKIALITVSDKDTDVNGKVICFI---EREVPFHLKAVYDNQ-YLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDEDAGENKAVTLSILNDNEN---FVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQP-PRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAV---DIDTGMNAELKYT---IVSGNNKGLFRIDPVTGNITLE 738

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BLAST of Protocadherin 1 vs. UniProt/SwissProt
Match: sp|Q9HC56|PCDH9_HUMAN (Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 4.789e-43
Identity = 206/683 (30.16%), Postives = 326/683 (47.73%), Query Frame = 3

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGD----------MTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIP------VTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            DRE LC     + + + +E  C     + I  N   +       +I+I V+D NDN P   +P I++++ E+  I  + P+  A D D+  +    Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN P  T ++QL ATD+D   N  +RY     +    + LF +    G+I +   LD E   E  I     +  +G S      A  TVTI+V+DVNDN P I ++  I  I+  V   YL +          +TV+D D+ +NG V C +   E ++      +  N  Y + TSS  D+E +   S KIV SD+G+P L+ +  + ++++D +DN   F +      V E    G +L  I A D+DS  + +       + +F +LDR+TGV+ +++VFDRE ++ +   VT R+  +P     A +++ +LD NDN PKF    + F VSE       +G +   D D   N  V  +    ++    F +D   G I+     D E Q  +   + ATD G P  RSST  V ++V+D NDN P   S           +++    IP      V   D DT  N ++++    +       LFRID  TG IT++
Sbjct:   93 DREKLC-----AGASYAEENECFFELEVVILPNDFFR-----LIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYEL-LNGQSV-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDRE---ETAIHKVTVLASDGSS----TPARATVTINVTDVNDNPPNIDLRYIISPINGTV---YLSEKDPVNTKIALITVSDKDTDVNGKVICFI---EREVPFHLKAVYDNQ-YLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDN---FVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQP-PRSSTAKVTINVMDVNDNSPVVISPPSNTSF----KLVPLSAIPGSVVAEVFAVDVDTGMNAELKY---TIVSGNNKGLFRIDPVTGNITLE 738

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BLAST of Protocadherin 1 vs. UniProt/SwissProt
Match: sp|Q24292|DS_DROME (Protein dachsous OS=Drosophila melanogaster OX=7227 GN=ds PE=1 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 2.711e-41
Identity = 182/635 (28.66%), Postives = 317/635 (49.92%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNK----FPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSI---EGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRM--------YLGDMTVTDADSGIN-GDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYL--TDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDI----GCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEI 2183
            ++ + V+D+NDN P   Q  +H+   E+     K  L  A D D   ++   Y++     +  F+L+    +    +  L++   LD ETT  ++  +EA +   P       V +T+ D ND+ PI+    +  T+PEN    T ++Q+ A+D+D+  N ++ Y+I   +   + +F I+   G I +   LD+E  E   + +  K  D+G  +  +++ T  V+I V+DVNDN+P I   N IF  D+  P++        ++  ++V D DS     +V+  +   +   +L+      N+IY +      D E+ S  ++ +V +D G P L +S  +FLRI DV+DN  +F +  +   V E  + GT + ++ A D+D    S+L Y L  T +    + ++D QTG++ +    D ET+   ++ V  R+   P  + +A +L+ I D+NDN+P FD+  Y+ SV+E + +   I KV+A DPD   N  V YT     ++   F V    G+I +   LD+E +  +   ++ATDRG     S+T  + + + D NDN P F  R +++ +       ++  S  ++ V   D D  N   Q + ++V  +    +FRID  TGEI
Sbjct:  106 RVLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAK--DHG--EQPLET-TAFVSIRVTDVNDNQPTI---NVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALT---TRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRG---GLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFG-QVSYRIVAGNE-AGIFRIDRSTGEI 724

HSP 2 Score: 127.872 bits (320), Expect = 1.820e-28
Identity = 187/696 (26.87%), Postives = 303/696 (43.53%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKLQ-NPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPG--------------QDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPR-MYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIK-KFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKDL---AFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNA-EDP-DLRNNGT--------VVYTQQRL--DEYQFPFFVDQ-LGKIRLFQRLDYEIQPLHHLIIVATD-RGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRV--ISRDLIPVTDNDTDTKNRQMQFNLQMVTPSY------LMKLFRIDNQTGEITMD-----------------IDQQKTLTCEKLPKLIELKIRVFD 2264
            Q+ I V D NDN P+ + + + +++ ESA++G  L    A D DS    +  Y L   +    F    ID +   L L   LD+E++  HT  + A +   P       + V V D ND+PP++    + V + E+   N QI+Q++A+D D+  N  + Y I   G              Q   +    G I L   LD E  +     LTV  TDNG   +  K+    V + V D NDN P        F I+EN+ R   +G +T +D D G N  +   +      + ++ S        +I T    D E+     + +   D G P  S+ V + + + DV+DN  +    +     V E +  GT + ++ AVD+D    +S+ Y +   +D        +D  +GV+R+  V D E +  Y++ V   +  +P +    +L +++LD+NDN P F      F V E   +   +G ++  E P D+  N          V YT   L  D  +  F +D+  G + + + LD E+Q    L I A D       +SS  TV + V D NDN P++     ++ +   T V  I  +    TD DT T N  +Q+ L    P         M LFR+D+ TG +++                  +DQ   +T E+L   + +++R+ D
Sbjct:  863 QVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFA---IDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQ--LTVLATDNGTPAAHAKT---RVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSL------LPINSSFQVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFT-ATDADTGT-NGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVT-ERLQTSVTVRLRILD 1541

HSP 3 Score: 110.923 bits (276), Expect = 3.250e-23
Identity = 104/299 (34.78%), Postives = 158/299 (52.84%), Query Frame = 3

Query: 1236 FTSSSF--DHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTD-KKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTV-VYTQQRLD-EYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSR----YFEI--DIGCHTRVISRDLIPVTDNDTD 2090
             TSSSF   +   + + V +V      P L+S  EL + ++D +DN+ KF +K F   V EG   GTF+A++ A D D  S + L Y++ D   D AFV     +G+VR+N V DRE +D YK+ +   ++  P  T +A + ++I+D+NDN P F      +VSE  E+   I  ++A D D     T  +  +  +D E    F +D+  GK+ L +RLDYE+Q  + L ++A+D  H     + T + V V DENDN P F ++    YF I   I   +  +S D   +T N TD
Sbjct: 2220 LTSSSFALTNSQPNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNLVTVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAH----EARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATD 2514

HSP 4 Score: 103.605 bits (257), Expect = 4.866e-21
Identity = 125/452 (27.65%), Postives = 204/452 (45.13%), Query Frame = 3

Query:  723 PPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTY-NVLRYSI-EGPGQDLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPR-MYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQV------------------FDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPK 2000
            PPI+    +   + E+ P  T +  + A   D  + + +RYSI  G     F IE   G IR+   LD+E   +  + L ++ T   L +  +   T  V I V DVNDN P         S+ E+      L      D DSG +G V+  +     K   +    S + I     S   D+E S R ++ +  +D G P LS+++ + + ++DV+DN   F K  ++  V E + I   + ++ A D D+   + + Y + D        +D  T  + S+ V                   DRET+D Y++ V   +  +P       +++++LD NDNDPKF +  Y F + E       +G V A D DL  N  + Y+   ++     F V  + G+I   + LD E++ L+ L++ A D+G P  RS+   V + V D NDN P+
Sbjct:  771 PPIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEA--KSQVLLNIQAT---LGEPPVYGHT-QVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSGHLIL----SQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAG------VDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINS---SFQVHPVTGEISTREPLDRELRELYDLVVEARDQGTP-VRSARVPVRIHVSDVNDNAPE 1202

HSP 5 Score: 82.8037 bits (203), Expect = 1.377e-14
Identity = 110/429 (25.64%), Postives = 193/429 (44.99%), Query Frame = 3

Query: 1011 VTISVSDVNDNRPFIYIKNNIFSIDENVPR------MYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIY-DIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIK-KFFATGVDEGKEIGTFLAKIEAVDKDSTSS--LEYYL----TDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLY-----SFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFV--DQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLP 2231
            V ++V D NDN P     +      EN PR      +   D+ +   ++     VS  V    D   LS  +     +Y D+  S   D E +   S+ I   D G P L   + + + I+DV+DN   F + ++FAT V E   +GT + ++ A D D+  +  +EY +    +DK+ +    +D +TG +  N+  D ETK+ +++ V  ++        +A + I++ D+NDN P  + ++     S  +SE  +    + +++  DPD +     V       +  F      + +  + +   LD EI   + L +VATD+G P   +S +  +    D NDNPP+F+   +  ++          ++ V  +D D   N  + ++L   TP    + F+ID QTG IT     +  + CE  P
Sbjct:  107 VLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNV---NDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFAT-VPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQM--FRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRIT-DVNDNPPEFEQDLYHANV-MEVADPGTSVLQVLAHDRDEGLNSALTYSLAE-TPETHAQWFQIDPQTGLITT----RSHIDCETEP 522

HSP 6 Score: 80.8777 bits (198), Expect = 4.866e-14
Identity = 164/685 (23.94%), Postives = 276/685 (40.29%), Query Frame = 3

Query:  357 NPPKR--KQIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKL----PLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFP------QLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXX-----XXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDS------TYNVLRY-----SIEGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNN-------IFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNT-IYDIFTS---SSFDHEVSSRVSVKIVCSDNGQPK-LSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEA--VDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKT-----------------------DSAXXXXXXXXXXXXXPKF--DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVY--TQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFK-SRY---FEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEIT 2186
            NPP+   + + + V D NDN P    + +   + E A +G  +    P++   D       +S  DL+           +I+  F        L +   LD E  +    ++ A +    +    +   +       ND+ P W      + + E TP  T I   +ATD+D+       Y ++RY       +     LF ++   G + L   LD+E ++E    L V+  D   + +     + TV + + D ND+ P     N+       +F  D       +  +   D DSG NG ++  +     +      +++S T I ++  S   ++ D E   R ++ I   D+GQP+   SS+ L L ++   +N  +F++  +   + E    G+F+ ++ A  +     ++L Y +          +D Q G++ +   FDRE++  Y + V VR+    +                         D A + I + D+NDN P+F     Y  SV E  E    I  V A D D   N  ++Y  T   L      F +D        + LD E    + L I A+DRG P SR     + + V D+NDN P+FK S+Y    + D    T V+    I   D D    N ++ ++L   T       F ID Q+G IT
Sbjct: 1289 NPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQE--YLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGE---GRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGV-IHTVVASDLDEGPNADLIYSITGGNLGN---KFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQ---ISAVDADLGV-NARLVYSLANETQWQ----FAIDGQSGLIT 1956

HSP 7 Score: 80.1073 bits (196), Expect = 9.582e-14
Identity = 156/598 (26.09%), Postives = 254/598 (42.47%), Query Frame = 3

Query:  321 GISIQENSIVKSNPPKR--KQIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSH----TCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVL---SWQVTIPENTPSNTQIMQLSATDSDST--YNVLRYSIEGPGQDLFLIEGPGIIRLLGV---LDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPF----IYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVS-CLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDK-KDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQ-----IGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQ-LGKIRLFQ--RLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF-KSRY 2015
            G S+   ++    PP R    + I ++D NDN P   Q+    T+ E+A +G  +    A D D+  +    Y +     S K ++  ID +   + +  +LD ET   H      K    +P      V       +++ P I  +         I E+      + ++S  D DS   Y  +  ++ G      L      I L+ V   LD E +   T  L+V  TD G   +    A+ ++ + ++DVNDN P     +Y  N +   D   P   +  +   D D G+N  ++  L   PE      +    +  I    T S  D E      + +V  D G P LSS+  + + I DV+DN   F + F+   V E + +G  + K+ A D D    + + Y + +  K L   E+   +G +      D E +  Y+  V   ++   + T  A++ +++ D+NDN P F  R Y  S+ E  + + Q     I  V A DPD  N G V Y     +E    F +D+  G+I + +   L    QP+H L I ATD G+ +  ++   V +S+ID    PP F K+RY
Sbjct:  198 GYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAIN-RRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVIVHLPLDREIVSNYT--LSVVATDKG---TPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVAD---PGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLIT---TRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTT--AMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGI-FRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGN-LRSNADAVVFLSIIDAMQRPPIFEKARY 779

HSP 8 Score: 76.6406 bits (187), Expect = 9.918e-13
Identity = 179/691 (25.90%), Postives = 294/691 (42.55%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRY------SIEGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRP---------FIYIKNNIFSIDENVPRMY-LGDMTVTDADS-GINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVS--VKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSP------NKTDSAXXXXXXXXXXXXXPKFDRL--YSFSVSERKEINFQIGKVNAEDPDLRN--NGTVVY-TQQRLDEYQFPFFVDQL-GKIRLFQRLDYEI-QPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQM-VTPS--YLMKLFRIDNQTGEIT----MDIDQQKTLTCEKLP-----KLIELKIRV-------FDPTFTE 2279
            ++ I + D+NDN PK  Q     T+ E    G  +    A D+D+  +++  Y +        F +    +   +  ++  LD E    +  K+ A +   P+   TA + V ++D ND+ P +   +  VT+ E T     I  +SA D D TY  L Y      +++     +F ++   G + L   LDYE  +E    L V  +D      T+      +T+ V+D NDN P         +  I   I  I E++   + L  +  TDADS G N  V  ++   ++  S+      SN +  +   S     VSS     V+I+  D G+P L SS  L ++  D      +F++  +   + E   +G+ + ++     D + ++   +   ++ AF  L  Q+  +   +  DRE  D YK+ + +     P      N +    ++I ILD NDN P FDR   Y   +SE   + + I ++ A D D  N  N  VVY      DE+ F   +D + G + +  RLDY+     + LII A D  H     S     + + DENDN PKF    + +        +   +     +D D K    Q N  +   PS     K+FR+D+++G +T     D +Q++    E L      K   + +RV       F P FTE
Sbjct: 2254 ELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIV--LDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNL-VTVSEATELGAVITSISANDVD-TYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYE--LDVIASDAAHEARTV------LTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVH----PSNGVVSV-NMSRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQDALDQSLAI---IAGNEESAFELL--QSKAIVLVKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFT--IDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEY-VHFLAENEPVGSSVFRAHASDLD-KGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVEIESRDEFTPQFTE 2918

HSP 9 Score: 74.7146 bits (182), Expect = 4.043e-12
Identity = 154/610 (25.25%), Postives = 262/610 (42.95%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQ--NPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEAC---EPKCCXXX-XXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENV-PRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSS--SVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS-TSSLEYYLTDKKDLAFVELDRQTGVVRSNQV----FDR------------------------------------------------ETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQ---LGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF 2003
            I I V D NDN P+ +  +   L++ E+++ G  +    A D D   ++  +Y +       KF    ID+   +L     LD E  + +T +++A    +PK       +T+ V D ND+ P + +  +  ++ E+ P  T ++Q+SA D+D   N  L YS+    Q  F I+G  G+I  +G LD E L+    F+ V  TD G  +  ++SAT  V I+V D+NDNRP       I  +   + P   L  +   DAD G N ++  + +   +  ++S     + +   +  S S   E    + +++V  D G P  SS   +EL +         ++F  + +   + E    GT L ++ A+  D     +++      +   + LD  +G +R N+     +DR                                                   +E ++ +  R   +P     A L+I++ D NDN PKF  + +  +VSE       + +V+A D D  +N  + Y    +D      FV +    G +R    LD EI+ ++ L I+ATD G P   + T T+ V ++D NDN P F
Sbjct: 1780 IYITVGDVNDNSPEFRPGSCYGLSVPENSEPGV-IHTVVASDLDEGPNADLIYSITGGNLGNKFS---IDSSSGELS-ARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITTVGKLDRE-LQASYNFM-VLATDGG--RYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEI--VYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQSSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLLQVVALRSDGRRQKVQFSFGAGNEDGILSLDSLSGEIRVNKPHLLDYDRFSTPSMSALSRGRALHYEEEIDESSEEDPNNSTRSQRALTSSSFALTNSQPNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRY--HIVDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVP-QMTGTATIRVQIVDVNDNQPTF 2375

HSP 10 Score: 72.4034 bits (176), Expect = 2.019e-11
Identity = 168/659 (25.49%), Postives = 279/659 (42.34%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQ-NPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDL-KCNADSKKFKLTMIDNK-----FPQ---LELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIY-IKNNIFSI-DENVPRMYLGDMTVTDADSGINGDV--SCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDST---SSLEYYLTD----------KKDL--AFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSA--XXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQR----LDEYQFP----FFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXX--DENDNPPKFKS------RYFEIDIGCHTRV--ISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITM 2189
            I + V+D NDN P  + +   + + ES  I  ++    A D D+  +++  Y +     D+    ++  D       FP    + L + LD ET   +   + A +   P       V V V+D ND+ P +    ++  I EN    + +  ++A+D D   N  +RYS+        +    G I     LD E  E     L V+  D G   + ++SA   V I VSDVNDN P I   + ++ S+ +E  P   +  +   D D G N  +  S +     D   L     +S  I    T    DHE  S   + +  SD G P   +   L + + D++DN   F        V E   +G  +  I  +++ +    +S+E    D           KDL  A  ++DR +G +   ++ DRE + E+++ +   +  + N   S+   + I++ D+NDN P++ +      VSE   +   I    A D D   NG + Y   R    L+E Q      F +D L G + L   LD+E    + LI+ A D+   V+    T+V V +   D ND+ P F S      +   + I   TR+  +   ++ V ++  D  N Q+ +    +T       FRI++QTG I +
Sbjct:  969 ILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTREPLDRELRELYD--LVVEARDQG---TPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIR---TRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGD--NGQLTYE---ITGGNGEGRFRINSQTGIIEL 1614

HSP 11 Score: 69.3218 bits (168), Expect = 1.900e-10
Identity = 171/680 (25.15%), Postives = 287/680 (42.21%), Query Frame = 3

Query:  318 FGISIQENSIVKSNPPKRKQI--EICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDL-----KCN-ADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXX------XXXXHPPIWTV------LSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIEG-PGQDLFLIEG-PGIIRLLGVLD--YEKLEEKTIF-LTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTS-SSFDHEVSSRVSVKIVCSD-NGQPKLSSSV----------------------ELFLRIKDVDDNNVKFIK-KFFATGVDEGKEIGTFLAKIEA-VDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSP-NKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDT-KNRQMQFNLQMVTPSYLMKLFRIDNQTGEIT 2186
            F + I+      SN P+   I  +I V D NDN P+  Q+PI L + E+  +G  +    A D D+  +    Y L     + N +  +   L  +D+    L L + LD E    +   ++A +     T  +  +V       D NDH P +         +  + I + T     +  + A D DS  N  L Y I G  G+  F I    GII L+  L    E +E+   F L +   D+G  Q   K ++  + + V   ++N P         +I ENVP    G   +      ++G  +  ++Y E    ++      +    I T+   FD E  +   + +   D N Q  LSSS                        +++ + DV+DN+ +F     +   V E  E G     + + +D+   + L Y +T         +D  +G + S +  DRE    Y + +   ++  P ++     + I + D NDN P+F    Y+ SV E   +   + +++A D DL  N  +VY+    +E Q+ F +D Q G I    +LD E+Q  ++ +++ATD G    RS+T  V ++V+D NDN P F+ RY  I          + L+ V   D D   N ++ ++L     +   K FRI+  TG ++
Sbjct: 1396 FRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHG--QPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPS---GSFVLQVTAKSLHGAENANLSY-EIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGEL-SARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLA--NETQWQFAIDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFE-RYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAK-FRINPSTGALS 2064

[Close]

BLAST of Protocadherin 1 vs. UniProt/SwissProt
Match: sp|Q6X862|PC11X_GORGO (Protocadherin-11 X-linked OS=Gorilla gorilla gorilla OX=9595 GN=PCDH11X PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.425e-39
Identity = 219/771 (28.40%), Postives = 353/771 (45.78%), Query Frame = 3

Query:   30 IFFIFLGSISWCLGC---NFTFEEEESSVNDKGIRFNDIINVDGPRNKYHYSIVPESSVVSINQ---------EGIIRFKRGT----------DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMID----NKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYS----IEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIK------NNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEY-YLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF---KSRY-FEIDI-GCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITM 2189
            IF + L  + +  G    N+T  EE      + +   D++         + S++P  S+ +  Q           +IR +  T          DRE LC        C  +  V  +P  I             +  +I   + D NDN P      I++++ E++ I  K  L  AVD D  ++    Y+L        F L +I+    +K PQL +   LD E   ++  K++  +   P+   TA++ V+V D ND+ P++     +V+IPEN P  T + QL ATD+D   N  + +S    +    + LF +    G+I +   LD E+     +   V  +D GL       A   V ++V+DVNDN P I I+      N+   + EN+P    +  +TVTD D+  NG V+C   + + +I      + SN  + + T++  D+E +   ++K++ +D G+P L+ S  LF+++KD +DN   F + F    + E    G  L K+ A D DS  + E  YL          LDR+TG++   +  DRE +D+Y   +  ++   P  T +  + + I+D NDN P F    Y+F V E    +  +G +   DPD  +N  V  T   LDE    F +D Q G IR     D E Q  +   + A D G  VSRSS+  V ++V+D NDN P F    S Y +E+ +   +   +   +I V DNDT   N +++++   +       LF ID +TG IT+
Sbjct:    9 IFAVLLACVVFHSGAQEKNYTIREEMP----ENVLIGDLLK------DLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIF------------RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELI--KSQNMFGLDVIETPEGDKMPQLIVQKELDREKKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLL--VLASDGGL-----MPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTC---FTDHEIPFRLRPVFSNQ-FLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAV--TLSILDEND-DFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGR-VSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVIAV-DNDTGM-NAEVRYS---IVGGNTRDLFAIDQETGNITL 735

HSP 2 Score: 95.9005 bits (237), Expect = 9.949e-19
Identity = 146/559 (26.12%), Postives = 238/559 (42.58%), Query Frame = 3

Query:  363 PKRKQ---IEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSK---SVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXXXXX-HPP------IWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV---------LRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTI-FLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDEN-VPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF---DRLYSFSV----SERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQ-LGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            P+R     +++ V D NDN P   +  I +++ E+A +G  +    A D D   ++K   S  +L  N   + F L         + +   LD E T +H   + A +        + +  + D + + P      I   ++  V + EN P NT+I  ++ TD D+ +N          + + +     + FL+E          LDYE  +E  I  L        L+QS +      + I V D NDN P         SI EN  P + L  ++ TDADSG N +++ L+  P+     S  + +      +      D E   +    I+  DNG P L+S+V +F+ I D +DN+  F    +   V E       +  I   D D    S++   + D+ D     +D QTGV+R N  FDRE ++ Y   V   +    +++ SA + I ++D+NDN P F      YS+ +    +    + FQ+  V   D D   N  V Y+    +     F +DQ  G I L ++ D     LH +++ A D G P
Sbjct:  227 PQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTG---LITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLE------TAAYLDYESTKEYAIKLLAADAGKPPLNQSAM------LFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLG-PDAPPEFSLDRRTGM----LTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDEND--DFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVIAV---DNDTGMNAEVRYSIVGGNTRDL-FAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 759

[Close]

BLAST of Protocadherin 1 vs. UniProt/SwissProt
Match: sp|Q6WXV7|PC11X_PONPY (Protocadherin-11 X-linked OS=Pongo pygmaeus OX=9600 GN=PCDH11X PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.783e-39
Identity = 203/678 (29.94%), Postives = 322/678 (47.49%), Query Frame = 3

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMID----NKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYS----IEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIK------NNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEY-YLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF---KSRY-FEIDI-GCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITM 2189
            DRE LC        C  +  V  +P  I             +  +I   + D NDN P      I++++ E++ I  K  L  AVD D  ++    Y+L        F L +I+    +K PQL +   LD E   ++  K++  +   P+   TA++ V+V D ND+ P++     +V+IPEN P  T + QL ATD+D   N  + +S    +    + LF +    G+I +   LD E+     +   V  +D GL       A   V ++V+DVNDN P I I+      N+   + EN+P    +  +TVTD D+  NG V+C   + + +I      + SN  + + T++  D+E +   ++K++ +D G+P L+ S  LF+++KD +DN   F + F    + E    G  L K+ A D DS  + E  YL          LDR+TG++   +  DRE +D+Y   +  ++   P  T +  + + I+D NDN P F    Y+F V E    +  +G +   DPD  +N  V  T   LDE    F +D Q G IR     D E Q  +   + A D G  VSRSS+  V ++V+D NDN P F    S Y +E+ +   +   +   +I V DNDT   N +++++   +       LF ID +TG IT+
Sbjct:   92 DREKLCAGIPRDEHCFYEVEVAILPDEIF------------RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELI--KSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLL--VLASDGGL-----MPARAMVLVNVTDVNDNVPSIDIRYIVNPINDTVVLSENIPLNTKIALITVTDKDADHNGRVTC---FTDHEIPFRLRPVFSNQ-FLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAV--TLSILDEND-DFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGR-VSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVIAV-DNDTGM-NAEVRYS---IVGGNTRDLFAIDQETGNITL 735

HSP 2 Score: 96.6709 bits (239), Expect = 6.278e-19
Identity = 144/551 (26.13%), Postives = 235/551 (42.65%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSK---SVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXXXXX-HPP------IWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV---------LRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTI-FLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDEN-VPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF---DRLYSFSV----SERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQ-LGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            +++ V D NDN P   +  I +++ E+A +G  +    A D D   ++K   S  +L  N   + F L         + +   LD E T +H   + A +        + +  + D + + P      I   ++  V + EN P NT+I  ++ TD D+ +N          + + +     + FL+E          LDYE  +E  I  L        L+QS +      + I V D NDN P         SI EN  P + L  ++ TDADSG N +++ L+  P+     S  + +      +      D E   +    I+  DNG P L+S+V +F+ I D +DN+  F    +   V E       +  I   D D    S++   + D+ D     +D QTGV+R N  FDRE ++ Y   V   +    +++ SA + I ++D+NDN P F      YS+ +    +    + FQ+  V   D D   N  V Y+    +     F +DQ  G I L ++ D     LH +++ A D G P
Sbjct:  235 LQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTG---LITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPINDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLE------TAAYLDYESTKEYAIKLLAADAGKPPLNQSAM------LFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLG-PDAPPEFSLDRRTGM----LTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDEND--DFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVIAV---DNDTGMNAEVRYSIVGGNTRDL-FAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 759

[Close]

BLAST of Protocadherin 1 vs. UniProt/SwissProt
Match: sp|Q6WYY1|PC11X_PANPA (Protocadherin-11 X-linked OS=Pan paniscus OX=9597 GN=PCDH11X PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.504e-39
Identity = 216/770 (28.05%), Postives = 349/770 (45.32%), Query Frame = 3

Query:   30 IFFIFLGSISWCLGC---NFTFEEEESSVNDKGIRFNDIINVDGPRNKYHYSIVPESSVVSINQ---------EGIIRFKRGT----------DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMID----NKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYS----IEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIK------NNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEY-YLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF---KSRY-FEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITM 2189
            IF + L  + +  G    N+T  EE      + +   D++         + S++P  S+ +  Q           +IR +  T          DRE LC        C  +  V  +P  I             +  +I   + D NDN P      I++++ E++ I  K  L  AVD D  + +  V + +       F L +I+    +K PQL +   LD E   ++  K++  +   P+   TA++ V+V D ND+ P++     +V+IPEN P  T + QL ATD+D   N  + +S    +    + LF +    G+I +   LD E+     +   V  +D GL       A   V ++V+DVNDN P I I+      N+   + EN+P    +  +TVTD D+  NG V+C   + + +I      + SN  + + T++  D+E +   ++K++ +D G+P L+ S  LF+++KD +DN   F + F    + E    G  L K+ A D DS  + E  YL          LDR+TG++   +  DRE +D+Y   +  ++   P  T +  + + I+D NDN P F    Y+F V E    +  +G +   DPD  +N  V  T   LDE    F +D Q G IR     D E Q  +   + A D G  VSRSS+  V ++V+D NDN P F    S Y +E+ +           +   DNDT   N +++++   +       LF ID +TG IT+
Sbjct:    9 IFAVLLACVVFHSGAQEKNYTIREEMP----ENVLIGDLLK------DLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIF------------RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPD--VGTNGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLL--VLASDGGL-----MPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTC---FTDHEIPFRLRPVFSNQ-FLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAV--TLSILDEND-DFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGR-VSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVMAVDNDTGM-NAEVRYS---IVGGNTRDLFAIDQETGNITL 735

HSP 2 Score: 96.6709 bits (239), Expect = 5.765e-19
Identity = 148/559 (26.48%), Postives = 237/559 (42.40%), Query Frame = 3

Query:  363 PKRKQ---IEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSK---SVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE----PKCCXXXXXXXXXXXXXXHPPIWTVLSW---QVTIPENTPSNTQIMQLSATDSDSTYNV---------LRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTI-FLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDEN-VPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF---DRLYSFSV----SERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQ-LGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            P+R     +++ V D NDN P   +  I +++ E+A +G  +    A D D   ++K   S  +L  N   + F L         + +   LD E T +H   + A +    P      V    V D+     I  +++     V + EN P NT+I  ++ TD D+ +N          + + +     + FL+E          LDYE  +E  I  L        L+QS +      + I V D NDN P         SI EN  P + L  ++ TDADSG N +++ L+  P+     S  + +      +      D E   +    I+  DNG P L+S+V +F+ I D +DN+  F    +   V E       +  I   D D    S++   + D+ D     +D QTGV+R N  FDRE ++ Y   V   +    +++ SA + I ++D+NDN P F      YS+ +    +    + FQ+  V   D D   N  V Y+    +     F +DQ  G I L ++ D     LH +++ A D G P
Sbjct:  227 PQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTG---LITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLE------TAAYLDYESTKEYAIKLLAADAGKPPLNQSAM------LFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLG-PDAPPEFSLDRRTGM----LTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDEND--DFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVMAV---DNDTGMNAEVRYSIVGGNTRDL-FAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 759

[Close]

BLAST of Protocadherin 1 vs. TrEMBL
Match: A0A0S1VVS0 (Protocadherin-h OS=Lethenteron camtschaticum OX=980415 GN=Pcdh-h PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.623e-45
Identity = 210/737 (28.49%), Postives = 346/737 (46.95%), Query Frame = 3

Query:  243 DREWLCK-LTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKLEACE----PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEG----PGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENV-------PRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF----KSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLPKLIELKIRVFDPTFTEFKDHCVLKLKLSQFYIKTPSNDHQIQD 2360
            DRE LC  + D  A C+ +  V  +P     Q   ++K        ++I V D NDN P   +P I+LT+ E+  +G +  LQ A D D+ L+    Y L    ++  F L +I+     K PQL +  SLD E    +  KL+A +    P+     +       +++HP ++     +V IPENTP  T ++QL ATD+D   N  + YS  G    P + LF ++   G+I + G LD E  +     L V  TD G +      AT TVT+SV+DVNDN P + + + I  +D  +       P   +  + V+D D   NG V+C +   +    L  +  +    + + TS+  D E  +  SV++V +D G P++SS+  + +R++D +DN   F          E    G  +  + A D+DS   + + YYL      AF  L+  TGV+   +  DRE ++ Y+ +V  R+  +P+   +A ++I++LD NDN PKF ++ ++F +SE       +G ++  D D   N  V ++     +    F ++ + G I+     D E +P +   + A D G P  ++S   V + ++D NDN P       +  + +     +   S   +  TD D+  +N ++ +++    P     LF ID  TG IT+    QK L   +   L  L +RV D  F E     VL   ++ F  +T  N   +Q+
Sbjct:   92 DREQLCPDVADEEAGCYHEVQVVVLPN----QYFRLIK--------VKILVEDINDNAPSFPSPVINLTIAENMPVGTRFSLQAAGDPDAGLNGIQRYALTDTGNA--FTLEVIEGADGEKSPQLLIRGSLDRERKEVYEMKLKAEDGGDPPRSSTAILRVTVTDVNDNHP-VFEQSQIEVKIPENTPIGTPVIQLRATDADLGLNAEVTYSYSGRVSSPARRLFQLDNLTGVITVRGPLDRE--DTALYRLIVLATDRGPNPV---PATATVTVSVADVNDNAPSVAVHDIISPVDGVIHLTEAAPPNTPIALIEVSDPDLEQNGRVTCRIEG-DVPFQLKPAYQNHENQFLLETSALLDFETKNEYSVRLVATDLGSPRMSSTATVVVRLRDENDNPPVFNPGVVEATAYENNAPGAQIVTLAAGDRDSGKNAQMHYYLGPDAPPAF-RLNPSTGVLSVAEPLDREERNLYRFSVIARDNGAPSMHGNATVVIRVLDQNDNPPKFNNKEFNFFLSENLPRFGTVGVISVTDADEGKNALVTFSLVGNSDI---FTINPVTGMIQSNISFDREQKPSYTFQVQAVDAGEP-PKTSFAKVTIHIMDINDNAPTVLLPPSNASYRLVTPSTSPGTSVAEVMATDIDSG-ENAELSYSVVGGNP---FNLFAIDQATGNITL---TQKLLPAHQ--GLHRLVVRVNDAGFPESLYSIVL---VNLFVNETVGNASYVQE 790

[Close]

BLAST of Protocadherin 1 vs. TrEMBL
Match: A0A401PH07 (Uncharacterized protein OS=Scyliorhinus torazame OX=75743 GN=scyTo_0001976 PE=4 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.848e-41
Identity = 207/704 (29.40%), Postives = 334/704 (47.44%), Query Frame = 3

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLIEGPGIIR-------LLGVLDYEK---LEEKTIF-LTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGD----------MTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF-----KSRYFEIDIGCHTRVISRDLIPVTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLPKLI 2240
            DRE LC  T   + C  +  V  +P            ++  +  +++I VRD NDN P   +P I++++ E+     + P+  A D D+   S  V   +         L M++     K+PQL +  SLD E   ++  K+   +   P+   TA++ +T+ D ND+ P++     +  IPE+ P  T ++QL ATD+D   N  +RY        LF  + P  +R        LG++  ++    EE  I  +T+  TD   S      A  TV I+V+DVNDN P I I+  I  I+  V   YL +          +TV+D D+ +NG V C   Y E ++      +  N  Y + TS+  D+E +   S +IV SD+G+P L+ S  + ++++D +DN   F +      V E    G +L  I A D DS  + E       + +F +LDR+TGV+ +++VFDRE ++ Y   VT R+  +P     A +++ +LD NDN+PKF    + F VSE       +G +   D D   N  V+ +    +     F +D L G IR     D E Q  +   + A DRG P +R+S   V ++VID NDN P        S +  + +      +  ++  V   D DT  N ++++    +       LFRID  TG IT+  +++ T+T + L +L+
Sbjct:   91 DRESLCSGTYTDSECFFEIEVVVLP------------NDHFRLIKVKIFVRDVNDNAPMFPSPVINISIPENTLSNSRFPIPSATDPDT--GSNGVQHYQLLNGQGILGLDMVETPEGEKWPQLIVQQSLDREQKDTYVMKIKVQDGGSPQKSSTAILQITISDVNDNKPVFRESQLEAHIPEDAPLGTSVIQLHATDADVGSNAEIRY--------LFSPQTPPAVRRHFALNSTLGLITVQRSLDREETAIHKMTILATDGSSS-----PARATVIINVTDVNDNPPGIDIRYIISPINGTV---YLSEKDPINTKIALITVSDKDTDVNGKVVC---YIEKEVPFHLKAVYDNQ-YLLETSAFLDYEGTKEYSFRIVASDSGKPSLNQSALVKVKLEDENDNPPVFSQPVIELSVPENNHRGLYLTTISATDDDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERYIFTVTARDSGNPPLQSQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDMDAGENAEVMASVVGDNAN---FILDPLSGVIRSNVSFDREQQSSYTFEVKAVDRGRP-ARTSIAKVTINVIDVNDNSPVVIYPPSNSSFKLVPLSAIPGSVVAEVFAV---DVDTGMNAELKYT---IVSGNSKGLFRIDPVTGNITL--EEKPTVTDQGLHRLV 748

HSP 2 Score: 95.9005 bits (237), Expect = 2.639e-16
Identity = 138/549 (25.14%), Postives = 229/549 (41.71%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXXXXX-HPP------IWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFL----------TVKVTDNG---LSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPR-MYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSS-FDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQ------IGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            ++I + D NDN P   ++ +   + E A +G  +    A D D   +++  Y           +   +++    + +  SLD E T  H   + A +          +  + D + +PP      I + ++  V + E  P NT+I  ++ +D D+  N         G+ +  IE      L  V D + L E + FL           +  +D+G   L+QS +      V + + D NDN P         S+ EN  R +YL  ++ TD DSG N ++         ++  + S    +    + T+S  FD E   R    +   D+G P L S   + + + D +DNN KF    F   V E     + +  I   D D+  + E   +   D A   LD  +GV+RSN  FDRE +  Y   V   ++  P +T  A + I ++D+NDN P    +Y  S S  K +         + +V A D D   N  + YT    +     F +D + G I L ++     Q LH L++  +D G+P
Sbjct:  234 LQITISDVNDNKPVFRESQLEAHIPEDAPLGTSVIQLHATDADVGSNAEIRYLFSPQTPPAVRRHFALNSTLGLITVQRSLDREETAIHKMTILATDGSSSPARATVIINVTDVNDNPPGIDIRYIISPINGTVYLSEKDPINTKIALITVSDKDTDVN---------GKVVCYIEKEVPFHLKAVYDNQYLLETSAFLDYEGTKEYSFRIVASDSGKPSLNQSAL------VKVKLEDENDNPPVFSQPVIELSVPENNHRGLYLTTISATDDDSGKNAEIVY-------QLGPNASFFDLDRKTGVLTASRVFDREEQERYIFTVTARDSGNPPLQSQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDMDAGENAEVMASVVGDNANFILDPLSGVIRSNVSFDREQQSSYTFEVKAVDRGRPARTSIAKVTINVIDVNDNSPVV--IYPPSNSSFKLVPLSAIPGSVVAEVFAVDVDTGMNAELKYTIVSGNSKGL-FRIDPVTGNITLEEKPTVTDQGLHRLVVNISDLGYP 757

[Close]

BLAST of Protocadherin 1 vs. TrEMBL
Match: A0A2U3WSP2 (protocadherin-9 OS=Odobenus rosmarus divergens OX=9708 GN=PCDH9 PE=4 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.018e-41
Identity = 207/688 (30.09%), Postives = 325/688 (47.24%), Query Frame = 3

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGD----------MTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQR------LDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIP------VTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            DRE LC     + + + +E  C     + I  N   +       +I+I V+D NDN P   +P I++++ E+  I  + P+  A D D+  +    Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN P  T ++QL ATD+D   N  +RY     +    + LF +    G+I +   LD E   E  I     +  +G S      A  TVTI+V+DVNDN P I ++  I  I+  V   YL +          +TV+D D+ +NG V C +   E ++      +  N  Y + TSS  D+E +   S KIV SD+G+P L+ +  + ++++D +DN   F +      V E    G +L  I A D+DS  + +       + +F +LDR+TGV+ +++VFDRE ++ +   VT R+  +P     A +++ ++D NDN PKF    + F VSE       +G +   D D   N  V  +         LD Y         G I+     D E Q  +   + ATDRG P  RSST  V ++V+D NDN P   S           +++    IP      V   D DT  N ++++    +       LFRID  TG IT++
Sbjct:   93 DREKLC-----AGASYAEENECFFELEVVILPNDFFR-----LIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYEL-LNGQSV-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDRE---ETAIHKVTVLASDGSS----TPARATVTINVTDVNDNPPNIDLRYIISPINGTV---YLSEKDPVNTKIALITVSDKDTDVNGKVICFI---EREVPFHLKAVYDNQ-YLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVMDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYS--------GVIKSNVSFDREQQSSYTFDVKATDRGQP-PRSSTAKVTINVMDVNDNSPVVISPPSNTSF----KLVPLSAIPGSVVAEVFAVDIDTGMNAELKY---TIVSGNNKGLFRIDPVTGNITLE 738

[Close]

BLAST of Protocadherin 1 vs. TrEMBL
Match: Q6AX49 (Uncharacterized protein OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.062e-41
Identity = 201/689 (29.17%), Postives = 331/689 (48.04%), Query Frame = 3

Query:  306 CKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKK-FKLTMI---DNKFPQLELISSLDHETTTSH--TCKLE-ACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQD----LFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKN--------NIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVA--YPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYY---LTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRL--DYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPP------KFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLPKLIELKIRVFD 2264
            C + F +S+ +   + S  P+    +I + D NDN P   +P I L++ E+  +G   P+  A D DS ++  S Y+L    +++  F L +    D K PQL ++  LD E   S+  T K++    P    +A++ ++++D ND+ P +  L+++  +PEN+P    ++Q+ A DSD   N  + YS           L L    G+I + G +D E +   T+  +V   D G   +  K A   VTI++ D NDNRP I I+          + +I E+VP    +  + V+D D G+N  V+C+VA   P     +S++   S   Y + T++S D+E     +++IV  D+G P LSS+  L +++ DV+DN   F +        E  +I   + ++ A D DS S+ + +   L D        ++  +G +R N V DRE ++ Y  +V   +K  P+   +A ++I +LD NDNDPKF    Y+FSV E       +G V   D D   N  +  +     E +   FV Q G   +   +  D E Q  +   + A D G P  RSS   V ++V+DENDN P          +Y   +    T+V   + +   D DT   N ++++++    P    +LF+I    GE+T+    +KT+   K   L  L +RV D
Sbjct:  130 CFLEFEVSMTD---LMSPVPRLLDGQIEILDINDNTPNFNSPVITLSIPENTMVGMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQLIVMGKLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKLAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRLLHLDRSTGLITVQGPIDREDV--GTLKFSVIAKDKG---ANPKIARTQVTITIRDTNDNRPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGTDSKKKYFLQTTTSLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGSNAQLHYSILPDPSARGVFSINPDSGQIRVNMVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSV----EPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDP-PRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPETHPGTQV---NWVRAEDMDTGV-NAELEYSIASGNP---FQLFQISPNNGEVTL----EKTI-IRKHYGLHRLVVRVND 793

HSP 2 Score: 71.633 bits (174), Expect = 8.592e-9
Identity = 119/547 (21.76%), Postives = 228/547 (41.68%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQNPIH-LTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTT----SHTCKLEACEPKCCXXXXXXXXXXXXXXHPPI----WTVLSWQ---VTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEG---PGQDLFLIEGPG-------IIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIY--IKNNIFSIDENVPRMYLGDMTVTDADSGINGDVS-CLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFS---VSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            + I + D NDN PK +   +   + E++ +G  +   +A D+D  ++++  Y     +D+ + +L  +D     + +   +D E       S   K +   PK   T V       +++ P I    + +++ Q     I E+ P  T +  +  +D D   N     +     P Q L  +   G        ++    LDYE ++E TI   +   D+G   +   S+T ++ + V+DVNDN P     +   +F  + ++  + + +++ TDADSG N  +   ++  P  +   S +  S      I  +   D E        +V  D G P L  +  + + + D +DN+ KF+   +   V E     + +  +  +D D   +   +L+ + +     +   TG + S+  FDRE +  Y   +   +   P ++    + I +LD NDN P      + S   ++       Q+  V AED D   N  + Y+    + +Q        G++ L + +  +   LH L++   D+G P
Sbjct:  263 LRISILDTNDNAPKFEKLAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVR-RLLHLDRSTGLITVQGPIDREDVGTLKFSVIAKDKGANPKIARTQVTITIRDTNDNRPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQ-LKQVSDTGTDSKKKYFLQTTTSLDYESVKEYTI--EIVAVDSG---NPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVM-EVSATDADSGSNAQLHYSILPDPSARGVFSINPDSGQ----IRVNMVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPETHPGTQVNWVRAEDMDTGVNAELEYSIASGNPFQLFQISPNNGEVTLEKTIIRKHYGLHRLVVRVNDKGKP 797

[Close]

BLAST of Protocadherin 1 vs. TrEMBL
Match: A0A0P7XRW1 (Protocadherin-9-like OS=Scleropages formosus OX=113540 GN=Z043_100724 PE=4 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.065e-41
Identity = 195/632 (30.85%), Postives = 310/632 (49.05%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFI-------YIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPK--FKSRYFEIDIGCHTRVISRDLIPVTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            +I+I V+D NDN P   +P I++++ E+  I  +  +  A D D+  +S   Y+L    ++  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN+P  T ++QL ATD+D   N  +RY     +    + LF +    G+I +   LD E  E     L+V  +D   SQS   SA  TVTI+V+DVNDN P I        I   +F  +++     +  +TV+D D+ +NG V C +   E  +      +  N  Y + TSS  D+E +     KIV SD+G+P L+ +  + +R++D +DN   F +      V E  + G FL  I A D+DS  + E       + +F +LDR+TGV+ +++VFDRE +D +   VT R+  +P     A +++ I D NDN PKF    + F VSE       +G +   D D   N  V  +    +E    F +D   G I+     D E Q  +   + A D G P   SS+  V ++VID NDN P   +        +   + +    +  V   D+DT  N ++++    +       LFRID  TG IT++
Sbjct:  124 KIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGFNSVQHYELLNGQNT--FGLDIVETPEGEKWPQLIVEQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQMEVHIPENSPVGTSVVQLQATDADVGSNAEIRYLFSTQVSPATKRLFALNSTSGLITVQRPLDRE--ETAIHKLSVLASDG--SQS---SARATVTINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDVNGKVICFI---EKDVPFHLKAVYDNQ-YLLETSSLLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFSQPVIELSVMENNKRGLFLTTISATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQDRFLFTVTARDNGTPALQSQAAVIVTIQDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADTGENAAVTLSILNDNEN---FILDPFSGVIKSNVSFDREQQSSYTFDVKAVDNGRP-PCSSSAKVTINVIDVNDNTPVVIYPPSNVSFKLVPFSAIPGSVVAEVFAVDSDTGMNAELKY---TIVSGNSKGLFRIDPVTGNITLE 735

HSP 2 Score: 91.2781 bits (225), Expect = 6.480e-15
Identity = 144/558 (25.81%), Postives = 243/558 (43.55%), Query Frame = 3

Query:  354 SNPPKRKQ--IEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE-PKCCXXXXXXXXXXXXXXHPP------IWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV---------LRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNG---LSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPR-MYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSS-FDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQ------IGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
             NP K     +++ V D NDN P   ++ + + + E++ +G  +   +A D D   +++  Y           +L  +++    + +   LD E T  H   + A +  +    A VT+ V D ND+PP      I + ++  V + E  P NT+I  ++ +D D+  N          + + ++    + +L+E   +      LDYE  +E  IF  V  +D+G   L+Q      T  V + + D NDN P         S+ EN  R ++L  ++ TD DSG N ++         ++  + S    +    + T+S  FD E   R    +   DNG P L S   + + I+D +DN+ KF    F   V E     + +  I   D D+  +    L+   D     LD  +GV++SN  FDRE +  Y  +V   +   P  + SA + I ++D+NDN P    +Y  S    K + F       + +V A D D   N  + YT    +     F +D + G I L ++ D     LH L++  +D G+P
Sbjct:  225 GNPQKSSTAILQVTVTDVNDNRPVFKESQMEVHIPENSPVGTSVVQLQATDADVGSNAEIRYLFSTQVSPATKRLFALNSTSGLITVQRPLDREETAIHKLSVLASDGSQSSARATVTINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYLLETSSL------LDYEGTKEY-IFKIV-ASDSGKPSLNQ------TALVRVRLEDENDNPPIFSQPVIELSVMENNKRGLFLTTISATDEDSGKNAEIVY-------QLGPNASFFDLDRKTGVLTASRVFDREEQDRFLFTVTARDNGTPALQSQAAVIVTIQDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADTGENAAVTLSILNDNENFILDPFSGVIKSNVSFDREQQSSYTFDVKAVDNGRPPCSSSAKVTINVIDVNDNTPVV--IYPPSNVSFKLVPFSAIPGSVVAEVFAVDSDTGMNAELKYTIVSGNSKGL-FRIDPVTGNITLEEKPDSSAIGLHRLVVNISDLGYP 758

[Close]

BLAST of Protocadherin 1 vs. Ensembl Cavefish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1])

HSP 1 Score: 164.851 bits (416), Expect = 3.288e-41
Identity = 189/634 (29.81%), Postives = 306/634 (48.26%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIK------NNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF-----KSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            +I+I V+D NDN P   +P I++++ E+  I  +  +  A D D  +   SVY  +       F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPE++P  T ++QL ATD+D   N  ++Y     +    + LF +    G+I +   LD E+       L+V  +D   S     SA  TVTI+V+DVNDN P I ++      N    + E  P    +  +TV+D D+ +NG V C +   E  +      +  N  Y + TS+  D+E +     KIV SD+G+P L+ +  + +R++D +DN   F +      V E  +   +L  I A D+DS  + E       + +F +LDR+TGV+ +++VFDRE ++ +   VT R+  +      A +++ ILD NDN PKF    + F VSE       +G +   D D   N  V  +    +E    F +D   G I+     D E Q  +   + A D GHP   SS   V ++VID NDNPP        + +  + +      +  ++  V D DT   N ++++    +       LFRID  TG IT++
Sbjct:  126 KIKIVVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPD--MGPNSVYKYELVNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPESSPVGTSVVQLQATDADVGANAEIKYMFGTQVSPATRRLFALNSTTGLITVQRPLDREETANHK--LSVLASDGSSS-----SARATVTINVTDVNDNAPNIDLRYIISPTNGTVLLSEKDPVNTKIALITVSDKDTDVNGKVICFI---EKDVPFHLKAVYDNQ-YLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELTVSENNKRDLYLTTITATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQERFLFTVTARDNGTRALQSQAAVIVTILDQNDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVSLSILNDNEN---FILDPYTGVIKSNVSFDREQQSSYTFDVRAVDSGHP-PCSSAAKVTINVIDVNDNPPIVIYPPSNTSFKLVPLSAIPGSVVAEVFAV-DGDTGM-NAELKY---TIVNGNNKGLFRIDPVTGNITLE 737

[Close]

BLAST of Protocadherin 1 vs. Ensembl Cavefish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1])

HSP 1 Score: 164.851 bits (416), Expect = 3.439e-41
Identity = 189/634 (29.81%), Postives = 306/634 (48.26%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRY----SIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIK------NNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF-----KSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            +I+I V+D NDN P   +P I++++ E+  I  +  +  A D D  +   SVY  +       F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPE++P  T ++QL ATD+D   N  ++Y     +    + LF +    G+I +   LD E+       L+V  +D   S     SA  TVTI+V+DVNDN P I ++      N    + E  P    +  +TV+D D+ +NG V C +   E  +      +  N  Y + TS+  D+E +     KIV SD+G+P L+ +  + +R++D +DN   F +      V E  +   +L  I A D+DS  + E       + +F +LDR+TGV+ +++VFDRE ++ +   VT R+  +      A +++ ILD NDN PKF    + F VSE       +G +   D D   N  V  +    +E    F +D   G I+     D E Q  +   + A D GHP   SS   V ++VID NDNPP        + +  + +      +  ++  V D DT   N ++++    +       LFRID  TG IT++
Sbjct:  126 KIKIVVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPD--MGPNSVYKYELVNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPESSPVGTSVVQLQATDADVGANAEIKYMFGTQVSPATRRLFALNSTTGLITVQRPLDREETANHK--LSVLASDGSSS-----SARATVTINVTDVNDNAPNIDLRYIISPTNGTVLLSEKDPVNTKIALITVSDKDTDVNGKVICFI---EKDVPFHLKAVYDNQ-YLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELTVSENNKRDLYLTTITATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQERFLFTVTARDNGTRALQSQAAVIVTILDQNDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVSLSILNDNEN---FILDPYTGVIKSNVSFDREQQSSYTFDVRAVDSGHP-PCSSAAKVTINVIDVNDNPPIVIYPPSNTSFKLVPLSAIPGSVVAEVFAV-DGDTGM-NAELKY---TIVNGNNKGLFRIDPVTGNITLE 737

[Close]

BLAST of Protocadherin 1 vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32])

HSP 1 Score: 160.614 bits (405), Expect = 5.866e-40
Identity = 184/601 (30.62%), Postives = 292/601 (48.59%), Query Frame = 3

Query:  285 CHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNPI-HLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNAD-SKKFKLTMIDN---KFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIE---GPGQDLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIK--------NNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVA--YPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYY---LTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRL--DYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPP 1997
            C  K   C + F +S+ +  ++++  P+  +  I V+D NDN P+  +P+  L++ E+A +G    + +A D D+  +    YDL    + S  F L M ++   K PQL ++ +LD E   S+   + A +   P    +A++ V + D ND+ P +   S++  + EN+P    ++Q+ A DSD   N  + Y+I     P   +  IE   GII + G LD E++   +    V   D G S    KS+T  V+I V+D NDN P + I+        + + +I E++P    +  + V+D D G N  V+C+VA   P       +S + +   Y + T++  D+E      V+IV  D+G P LSS+  L +++ D +DN+  F    F     E  + G  +  + A+D DS ++ E     + D       E+D  +G VR+    DRE K+ Y+  VT  +K  P+   +A ++IK+LD NDNDPKF    YSFSV E       +G V   D D   N  V    Q   E     FV Q G   +   +  D E +  +   + A D G P  RSS   V ++V+DENDN P
Sbjct:   88 CRIKGKPCFLEFEVSVTD--LIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAHMGATFAIPQATDRDTERNGVLKYDLSAGPEASALFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIERSTGIISVKGPLDREEI--SSFKFHVIARDKGPSP---KSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQV----QLSVEPDVGNFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEP-PRSSYVGVTINVLDENDNAP 676

HSP 2 Score: 87.4261 bits (215), Expect = 3.673e-17
Identity = 119/552 (21.56%), Postives = 228/552 (41.30%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQNPIHLTMI-ESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSH----TCKLEACEPKCCXXXXXXXXXXXXXXHPPI-------WTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQDLFLIEGPG----------IIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSID---ENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXP--------KFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            + + + D NDN P+ +   +   + E++ +G+ +   +A D+D   + +  Y +   +D    K+  I+     + +   LD E  +S       + +   PK   T V       +++ P +        T       I E+ P  T +  +  +D D   N +   +   G   F +   G           ++    LDYE++ +  +   +   D+G   +   S+T ++ + V+D NDN P       +F ++   EN P   + D+   DADSG N ++   +        L E   SS    ++   S  D E   R   ++  +D G P    +  + +++ D +DN+ KF+   ++  V E     + +  +  +D D   + +  L+ + D+    +   TG + S+  FDRE +  Y   +   +   P ++    + I +LD NDN P         F RL   +  +       +  V AED D  +N  +VY+    + ++  +     G+I+L + L  +   LH L++  +DRG P
Sbjct:  229 LRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVP-KMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVA-GDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRV--EIVAVDSG---NPALSSTNSLRVQVTDTNDNSPIF--SPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSG---EVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSV-----VEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKP 763

HSP 3 Score: 74.3294 bits (181), Expect = 3.766e-13
Identity = 138/520 (26.54%), Postives = 218/520 (41.92%), Query Frame = 3

Query:  765 ENTPSNTQIMQLSA----TDSDSTYNV------LRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEE-----KTIFLTVKVTDNGLSQS-TIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDM----TVTDADSGINGDVSC-LVAYPEDK--ISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKDLA--FVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD------RLYS---FSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLG------KIRLFQR----LDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDL-IPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEI 2183
            E  P NT I  L+A     DS   Y +      LR  ++G   ++F  E P        +D E L++     K  FL  +V+   L Q+ + +   G   I V D+NDN P         S+ EN    ++G        TD D+  NG +   L A PE     SL  +      +  +    + D E+     + I   D G P   SS  L + I D +DN  +F K  +   V E   +G  + +++A D D      +EY +    D     ++++R TG++      DRE    +K +V  R+K    K+ +  + I++ D NDN P  +      R +S    ++SE   +   +  V   D D   N  V            PF +   G      K + F +    LDYE    + + IVA D G+P + SST ++ V V D NDN P F    FE++     +   + L +   D D+ T N ++ +++  +  S    LF ID  +GE+
Sbjct:   31 EEQPPNTLIGSLAADQGLPDSGHLYKLEVGAPYLR--VDGKTGEIFTTEIP--------IDRETLKDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGR--IEVQDINDNTPQFPSPVLTLSVQENA---HMGATFAIPQATDRDTERNGVLKYDLSAGPEASALFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAG----DVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNP-ALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGT-NAELVYSI--IADSSTRGLFEIDPSSGEV 527

HSP 4 Score: 56.225 bits (134), Expect = 1.773e-7
Identity = 125/520 (24.04%), Postives = 220/520 (42.31%), Query Frame = 3

Query:  753 VTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIE-GP-GQDLFLIEG--------PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMY-LGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDN----NVKFIK-KFFATGV---DEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTG----------VVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISR-DLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEI--TMDIDQQK 2207
            +++ EN           ATD D+  N VL+Y +  GP    LF ++         P +I +LG LD E   + +  LT+   D G      + ++  + + ++D NDN P     +    + EN P  Y +  +   D+D G NG++   +    D +        S  I  I      D E  S     ++  D G    SS+  + + + D +DN     ++ I  +  + GV    E   +GT +A ++  DKD   +         D+ F +L R  G           +++    D E   +Y++ +   +  +P  + +  L +++ D NDN P F   L+    +E  +   ++  V A D D   N  +VY+       +  F +D   G++R    LD E +  +   + A D+G P  R + T VI  + D NDN PKF    +   +  +   +S   ++ V D D   +N Q+Q +++   P   +  F + N TG I  ++  D++K
Sbjct:  138 LSVQENAHMGATFAIPQATDRDTERNGVLKYDLSAGPEASALFSLQMANDRGEKLPQLI-VLGNLDREL--KDSYDLTINAVDGGTPS---RYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIERSTGI--ISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPF-QL-RPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVL-DRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKG-ENAQVQLSVE---PD--VGNFVVQNGTGTILSSISFDREK 640

[Close]

BLAST of Protocadherin 1 vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32])

HSP 1 Score: 159.458 bits (402), Expect = 1.822e-39
Identity = 184/601 (30.62%), Postives = 292/601 (48.59%), Query Frame = 3

Query:  285 CHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNPI-HLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNAD-SKKFKLTMIDN---KFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIE---GPGQDLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIK--------NNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVA--YPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYY---LTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRL--DYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPP 1997
            C  K   C + F +S+ +  ++++  P+  +  I V+D NDN P+  +P+  L++ E+A +G    + +A D D+  +    YDL    + S  F L M ++   K PQL ++ +LD E   S+   + A +   P    +A++ V + D ND+ P +   S++  + EN+P    ++Q+ A DSD   N  + Y+I     P   +  IE   GII + G LD E++   +    V   D G S    KS+T  V+I V+D NDN P + I+        + + +I E++P    +  + V+D D G N  V+C+VA   P       +S + +   Y + T++  D+E      V+IV  D+G P LSS+  L +++ D +DN+  F    F     E  + G  +  + A+D DS ++ E     + D       E+D  +G VR+    DRE K+ Y+  VT  +K  P+   +A ++IK+LD NDNDPKF    YSFSV E       +G V   D D   N  V    Q   E     FV Q G   +   +  D E +  +   + A D G P  RSS   V ++V+DENDN P
Sbjct:  124 CRIKGKPCFLEFEVSVTD--LIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAHMGATFAIPQATDRDTERNGVLKYDLSAGPEASALFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIERSTGIISVKGPLDREEI--SSFKFHVIARDKGPSP---KSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQV----QLSVEPDVGNFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEP-PRSSYVGVTINVLDENDNAP 712

HSP 2 Score: 87.4261 bits (215), Expect = 4.928e-17
Identity = 120/552 (21.74%), Postives = 229/552 (41.49%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQNPIHLTMI-ESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTS---HT-CKLEACEPKCCXXXXXXXXXXXXXXHPPI-------WTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQDLFLIEGPG----------IIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSID---ENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXP--------KFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            + + + D NDN P+ +   +   + E++ +G+ +   +A D+D   + +  Y +   +D    K+  I+     + +   LD E  +S   H   + +   PK   T V       +++ P +        T       I E+ P  T +  +  +D D   N +   +   G   F +   G           ++    LDYE++ +  +   +   D+G   +   S+T ++ + V+D NDN P       +F ++   EN P   + D+   DADSG N ++   +        L E   SS    ++   S  D E   R   ++  +D G P    +  + +++ D +DN+ KF+   ++  V E     + +  +  +D D   + +  L+ + D+    +   TG + S+  FDRE +  Y   +   +   P ++    + I +LD NDN P         F RL   +  +       +  V AED D  +N  +VY+    + ++  +     G+I+L + L  +   LH L++  +DRG P
Sbjct:  265 LRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVP-KMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVA-GDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRV--EIVAVDSG---NPALSSTNSLRVQVTDTNDNSPIF--SPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSG---EVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSV-----VEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKP 799

HSP 3 Score: 75.8702 bits (185), Expect = 1.706e-13
Identity = 138/520 (26.54%), Postives = 218/520 (41.92%), Query Frame = 3

Query:  765 ENTPSNTQIMQLSA----TDSDSTYNV------LRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEE-----KTIFLTVKVTDNGLSQS-TIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDM----TVTDADSGINGDVSC-LVAYPEDK--ISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKDLA--FVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD------RLYS---FSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLG------KIRLFQR----LDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDL-IPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEI 2183
            E  P NT I  L+A     DS   Y +      LR  ++G   ++F  E P        +D E L++     K  FL  +V+   L Q+ + +   G   I V D+NDN P         S+ EN    ++G        TD D+  NG +   L A PE     SL  +      +  +    + D E+     + I   D G P   SS  L + I D +DN  +F K  +   V E   +G  + +++A D D      +EY +    D     ++++R TG++      DRE    +K +V  R+K    K+ +  + I++ D NDN P  +      R +S    ++SE   +   +  V   D D   N  V            PF +   G      K + F +    LDYE    + + IVA D G+P + SST ++ V V D NDN P F    FE++     +   + L +   D D+ T N ++ +++  +  S    LF ID  +GE+
Sbjct:   67 EEQPPNTLIGSLAADQGLPDSGHLYKLEVGAPYLR--VDGKTGEIFTTEIP--------IDRETLKDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGR--IEVQDINDNTPQFPSPVLTLSVQENA---HMGATFAIPQATDRDTERNGVLKYDLSAGPEASALFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAG----DVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNP-ALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGT-NAELVYSI--IADSSTRGLFEIDPSSGEV 563

HSP 4 Score: 56.6102 bits (135), Expect = 1.148e-7
Identity = 126/520 (24.23%), Postives = 220/520 (42.31%), Query Frame = 3

Query:  753 VTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIE-GP-GQDLFLIEG--------PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMY-LGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDN----NVKFIK-KFFATGV---DEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTG----------VVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISR-DLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEI--TMDIDQQK 2207
            +++ EN           ATD D+  N VL+Y +  GP    LF ++         P +I +LG LD E   + +  LT+   D G   +  + ++  + + ++D NDN P     +    + EN P  Y +  +   D+D G NG++   +    D +        S  I  I      D E  S     ++  D G    SS+  + + + D +DN     ++ I  +  + GV    E   +GT +A ++  DKD   +         D+ F +L R  G           +++    D E   +Y++ +   +  +P  + +  L +++ D NDN P F   L+    +E  +   ++  V A D D   N  +VY+       +  F +D   G++R    LD E +  +   + A D+G P  R + T VI  + D NDN PKF    +   +  +   +S   ++ V D D   +N Q+Q +   V P   +  F + N TG I  ++  D++K
Sbjct:  174 LSVQENAHMGATFAIPQATDRDTERNGVLKYDLSAGPEASALFSLQMANDRGEKLPQLI-VLGNLDREL--KDSYDLTINAVDGG---TPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIERSTGI--ISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPF-QL-RPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVL-DRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKG-ENAQVQLS---VEPD--VGNFVVQNGTGTILSSISFDREK 676

[Close]

BLAST of Protocadherin 1 vs. Ensembl Cavefish
Match: pcdh1b (protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2])

HSP 1 Score: 158.303 bits (399), Expect = 3.210e-39
Identity = 194/665 (29.17%), Postives = 317/665 (47.67%), Query Frame = 3

Query:  306 CKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNPI-HLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKK-FKLTMIDN---KFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQD----LFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIK--------NNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVA--YPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYY---LTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRL--DYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKS------RYFEIDIGCHTRVISRDLIPVTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITM 2189
            C + F +SI +  ++K + P+  +  I ++D+NDN P+  +PI  L + E+  +G    +  A+D D+  +  + Y L   +D+   F L + DN   K PQL ++ +LD E   ++   ++  +   P    +A++ +T+ D ND+ P +    ++  + ENTP    ++Q+ A D D   N  + YS   P  +    L +    GII++ G +D E  E   +  +V+  DNG      KS+   VTI+V D NDN P I I+        + I ++ E++P    +  + V+D D G N  V+C+VA   P    S S S  +S   Y + T++  D+E      ++IV  D+G P LSS+  L +++ D++DN   F    +     E  + G  +  + A D DS ++ E     +TD       +++  TG VR     DRE K+ Y+ +V   +K  P+   +A +++++LD NDNDPKF    YSFSV E       +G V   D D   N  V    Q   E +   FV Q G   +   +  D E +  +   + A D G P  RSS   + ++V+DENDN P          ++ +      TRV   D       D DT  N ++ +++    P     LFRI +  GEIT+
Sbjct:  107 CFLEFEVSITD--LMKGSGPRLIEGRIEIQDENDNTPQFPSPILELAIPENTYVGAHYSIPVAMDKDAGSNGIADYKLNSGSDAMNLFSLQVADNTDEKVPQLIVLGNLDREQRDTYDLSIKVIDGGTPPRYSSALLRITITDTNDNVPKFERSHYEGEMAENTPVGQSVLQVKANDDDLGANGQVTYSFHQPSPNVQRLLHIDHNTGIIQVKGSVDRE--EVPLLKFSVQARDNG---PQAKSSKAMVTITVKDRNDNAPSIRIRGFGLVAHEDGIANVSEDMPVGTPVALVEVSDKDEGENAVVTCVVAGDVPFQLRSASASDSTSKRKYFLQTTTPLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPSLYEVDFAEENQPGDKVLDVVATDADSGTNAELLYSIITDSATKGLFDINPNTGEVRVMNQLDREYKERYEFHVEAADKGVPSLKGTATVVVRVLDRNDNDPKFMLNGYSFSVLENMPPLSPVGMVTVIDADKGENAHV----QLSVEPENGKFVIQNGTGTILSSISFDREKESTYTFRLKAVDGGDP-PRSSYVGITINVLDENDNAPYVTKPSNSSYKFLQPLTSPDTRVEKVDA-----EDIDTGLNAELVYSITGGNP---HGLFRISSTDGEITL 751

HSP 2 Score: 80.4925 bits (197), Expect = 6.331e-15
Identity = 140/646 (21.67%), Postives = 268/646 (41.49%), Query Frame = 3

Query:  135 IINVDGPRNKY---HYSIVPESSVVSINQEGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKI------------PFGISIQENSIVKSNPPKRKQ--IEICVRDKNDNCPKLQNPIHLT-MIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTT----SHTCKLEACEPKCCXXXXXXXXXXXXXXHPPI----WTVLSWQ---VTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQDLFLIEGPG----------IIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSID---ENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR----LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            I+ +  P N Y   HYSI P +        GI  +K  +  + +  L  L  + +  E V ++             + +SI+   I    PP+     + I + D NDN PK +   +   M E+  +G  +   +A D+D   + +  Y     + + + +L  ID+    +++  S+D E       S   +    + K     V       +++ P I    + +++ +     + E+ P  T +  +  +D D   N +   +   G   F +               ++    LDYE+++E  I   +   D+G   +   S+T ++ + V+D+NDN P      +++ +D   EN P   + D+  TDADSG N ++  L +   D  +     ++ NT  ++   +  D E   R    +  +D G P L  +  + +R+ D +DN+ KF+   ++  V E     + +  +  +D D   +    L+ + +     +   TG + S+  FDRE +  Y   +   +   P ++    + I +LD NDN P   +     Y F +      + ++ KV+AED D   N  +VY+    + +         G+I L +    +   LH L++  +D+G P
Sbjct:  147 ILELAIPENTYVGAHYSI-PVAMDKDAGSNGIADYKLNSGSDAM-NLFSLQVADNTDEKVPQLIVLGNLDREQRDTYDLSIK--VIDGGTPPRYSSALLRITITDTNDNVPKFERSHYEGEMAENTPVGQSVLQVKANDDDLGANGQVTYSFHQPSPNVQ-RLLHIDHNTGIIQVKGSVDREEVPLLKFSVQARDNGPQAKSSKAMVTITVKDRNDNAPSIRIRGFGLVAHEDGIANVSEDMPVGTPVALVEVSDKDEGENAVVTCVVA-GDVPFQLRSASASDSTSKRKYFLQTTTPLDYERIKEYRI--EIVAVDSG---NPALSSTNSLKVQVTDMNDNAPVF--SPSLYEVDFAEENQPGDKVLDVVATDADSGTNAEL--LYSIITDSATKGLFDINPNT-GEVRVMNQLDREYKERYEFHVEAADKGVPSLKGTATVVVRVLDRNDNDPKFMLNGYSFSVLENMPPLSPVGMVTVIDADKGENAHVQLSVEPENGKFVIQNGTGTILSSISFDREKESTYTFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPSNSSYKF-LQPLTSPDTRVEKVDAEDIDTGLNAELVYSITGGNPHGLFRISSTDGEITLAKEFTRKHNGLHRLVVKVSDKGKP 775

[Close]

BLAST of Protocadherin 1 vs. Ensembl Sea Lamprey
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21])

HSP 1 Score: 147.132 bits (370), Expect = 1.977e-36
Identity = 200/716 (27.93%), Postives = 323/716 (45.11%), Query Frame = 3

Query:  234 RGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPP-KRKQIEICVRDKNDNCPKLQNPI-HLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCN--ADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPG---------QDLF-LIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNG---LSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDE----NVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLE--YYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRL-YSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDN------PPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLPKLIELKIRVFD 2264
            R  DRE LC   D    CH    V  +P          V+  P  K  ++ I V D NDN P    P+  +++ E+A  G + P+Q A D DS  +    Y+L  +  A    F+L++ +     K P L +  SLD E    +   L A +   P    +AV+ + V D ND+ P++      V IPEN+P  T ++QL A+D D+  N  + Y +             + LF L +  G++ + G+L+ E  E     + +  TD G   +  +   + T T     S   + R  +   N +  I E    N+P   +  +TV+D D G NG V+C +  PE    L   K++    Y + T  + D+E  +   V+I  +D G   LS ++ + +++ D +DN   F +  +   V E   IG  L  + A D+D   + E  Y+L       F  +D +TG++   +  DRE K  Y   +  +++  P    +A +++ +LD+NDN P+F    + F V+E    +  +G V   D D   NG V  +    D  Q  F +D + G IR     D E +  + L + ATD G P  RSST  V++ V+D NDN      PP   +  F +       +++   +   DND +  N ++++++    P     LF ID   G IT+   +  T T   L +L+   +RV D
Sbjct:  100 RKMDREALCGGQDPGDECHVDVQVGVLP----------VQPGPFFKLIEVRINVEDINDNAPAFAAPVLTVSVPENAPAGKRFPIQPANDPDSEANGVRRYELLPSDPATVSAFELSVTETANGEKVPYLVVRKSLDREERQLYEMNLRAVDGGSPPHSGSAVLRINVTDTNDNSPVFDQAEVNVEIPENSPVGTHVVQLHASDRDAGSNAEVVYRLGTSTGGAGSGQGGKRLFRLDQNSGLVTVNGLLNRE--ESPVYRIIILATDKGPEPVPATATVTVTVTDVNDNSPTIEIRDIVAPVNGVIYISEASHVNLP---VALITVSDPDIGANGAVTCYIYNPEVPFQLK--KLTYPNQYLLETRETLDYETKNEYVVQIKAADAGATSLSRTMSVTIKLLDSNDNAPVFTEPTYKVSVPENNVIGKHLITVSATDRDMDKNAEMVYFLGPDAPTMF-HMDPETGIISLTEQLDREKKANYSFTILAKDQGIPVLEGNATVIVNVLDVNDNRPRFSLAEFDFYVNENVPKHSTVGMVTVADSDEGENGRVRLSILGTDNRQL-FSIDPESGMIRSNVGFDREQRHYYVLEVQATDGGEP-VRSSTVKVVIHVMDINDNSPIVLMPPSNTTYKFVVPRTLPGTIVTE--VSAVDNDAEI-NAELRYHIVGGNPH---NLFHIDPVIGNITL--MEPLTETHHGLHRLV---VRVSD 784

[Close]

BLAST of Protocadherin 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008517.1 (pep scaffold:Pmarinus_7.0:GL476786:43429:129410:1 gene:ENSPMAG00000007697.1 transcript:ENSPMAT00000008517.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 133.65 bits (335), Expect = 7.039e-32
Identity = 163/548 (29.74%), Postives = 261/548 (47.63%), Query Frame = 3

Query:  720 HPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSI-EGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSI-DENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISL-SES-KMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKL---SSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEA--VDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQ-LGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPK------FKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEI--TMDIDQQKTLTCEKLPKLIELKIRVFDPTFTEFKDHCVLK 2303
            H P++   S++V+I E+ P N++   + ATD DS  N  ++Y I EG G + F I   G + +   LD E  EE +  LTV   D G+      S++ TV ++V DVNDN+P     + +F   +E      +G +  TDAD+G NG V+     P+    L SE+ +++S  ++D    +      ++  S  +V +D G+PK     ++V++F  ++DV+DN  +F K  +   V E     T L ++ A  VD+    +L Y + +  +     +D  TG +      DRE    Y + V+  +  +     S  + +++LD NDN P+F + L S    E   +   +  + A D D   +G V Y     + +   F +D+  G + L +RLD+E Q L+ L + A D G P  RSS T ++V V D NDNPP       F S    I IG  TRVI+   +   D D D  N ++ +++    P      F ID ++GEI    +ID++ T        L E+ +R  D           LK
Sbjct:  754 HAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGNGGEKFGIFPDGQLYVRYELDRETREEYS--LTVSAMDTGVEP---LSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVNFELDSETGRIASLRVFD--REALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVF--VQDVNDNPPQFAKSVYQASVSESASNLTQLLRVTASDVDEGVNGALRYAINEGNEGGKFTVDASTGQITLLGSLDREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELLITLTASDEDTGPSGDVRYAIVAGNTHAT-FAIDRSTGSVFLARRLDFETQRLYRLNVSAEDGGRP-PRSSATILVVHVRDFNDNPPAFLPGDVFASIMENIPIG--TRVIT---VTARDPDADV-NGELHYSIARQFPPGAH--FTIDPESGEICTAAEIDREVT------GGLFEVTVRATDKAIPVHTRRSALK 1276

HSP 2 Score: 123.635 bits (309), Expect = 7.375e-29
Identity = 141/544 (25.92%), Postives = 235/544 (43.20%), Query Frame = 3

Query:  372 KQIEICVRDKNDNCPKL-QNPIHLTMIESAK---------IGFKLPLQEAVDNDSPLHSKSVYDLKCNADS----KKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPK-CCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIE-GPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVA----YPEDKISLSESKMSSNTIY-DIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEIN---FQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATD 1922
             ++ + VRD NDN P+  ++     + E A          IG  L    A D DS    +  Y L  + DS      F L  +      L +   LD E+   +  +  A +      TA + V V+D ND+ P     S    +PE+ P  T ++++SATD D   N  L +SI  G  +  F +   G + +   LD E+  +    L V+V+D         S+   V++ ++DVNDN P      +  + +++     +  +   D DSG N  V   +A                 + NT+  ++      D E     ++ ++  D G+P L+S+  L + + D +DN  +F ++ +   + E +  GT + ++ A D D  +   L Y +          LD   G +   +  DRE    Y++ V  R+   P ++D+A + + + D+ND  P F +L  ++V  R+        I +V A D DL ++G V Y     ++    F V   G + L + LD E QP H LII ATD
Sbjct: 1601 ARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVL----AGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGA---LNVTRPLDRESRACYVLRARATDGGGLAATARLYVNVLDANDNAPSVQNDSLAAEVPEDAPPGTSLLRISATDDDEGVNAELEFSISSGDPEGRFAVGNDGQLSVARALDRER--QSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSPRSALAPEDSPVGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPTGDFRLDPVLGTLAVARPLDRERTASYELAVRARDGGGPARSDTASVRVTLSDVNDCSPAF-QLSPYTVHARENTQGPPVLILQVVARDDDLGSSGQVTYAAAGGNDGGA-FSVSPDGHVHLLRSLDREAQPQHVLIITATD 2133

HSP 3 Score: 118.242 bits (295), Expect = 3.725e-27
Identity = 150/584 (25.68%), Postives = 256/584 (43.84%), Query Frame = 3

Query:  720 HPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVL-RYSIEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP------RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIF-TSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLT--DKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTV--REKFSPNKTDSAXXXXXXXX-XXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYT--------QQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTD-TKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD--IDQQKTLTCEKLPKLIELKIRVFDPTFTEFKDHCVLKLKLSQF------YIKTPSNDHQIQDTKG 2369
            +PP++ V   ++ + ENT     I  LSATD+D   N L  YS+    +  F+++   G++R    LD E  E  +  LTV+ +D         +    ++++V D NDN P        F + E+        R  +G +   DADSG  G+V+  +A  ED    ++     + +      +   D E  +   ++   +D G   L+++  L++ + D +DN         A  V E    GT L +I A D D    + LE+ ++  D +    V  D Q  V R+    DRE +  Y + V V  R +  P +  SA+ +  IL  +NDN P F    S    E   +   +  V A DPD   N  V Y                  PF ++ + G++RL + LD E +  + L ++A D+G P   +ST T+ V+V D NDN P+F  R +E  I         +++ ++  D D   N ++++++    P+     FR+D   G + +   +D+++T +        EL +R  D       D   +++ LS        +  +P   H  ++T+G
Sbjct: 1512 NPPVFAVPEMELEVEENTGEGEVIFTLSATDADQGQNALVTYSVLSGSEGAFVVDAASGVLRASRRLDRE--ERASYLLTVRASDG------THATDARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDS-DWADGAFGLHPVTGALNVTRPLDRESRACYVLRARATDGG--GLAATARLYVNVLDANDNAPSVQNDSLAAEVPEDAPPGTSLLRISATDDDEGVNAELEFSISSGDPEGRFAVGNDGQLSVARA---LDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSPRSALAPEDSPVGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRP-PLTSTATLAVTVGDANDNAPRFPRREYEAAI-AEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPT---GDFRLDPVLGTLAVARPLDRERTASY-------ELAVRARDGGGPARSDTASVRVTLSDVNDCSPAFQLSPYTVHARENTQG 2069

HSP 4 Score: 113.62 bits (283), Expect = 1.084e-25
Identity = 178/667 (26.69%), Postives = 290/667 (43.48%), Query Frame = 3

Query:  294 KEAVCKIPFGISIQENSIVKSNPP--KRKQIEICVRDKNDNCPKLQNPIH--LTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEP---KCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQDLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP---RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSN-TIY---DIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRET------KDEYKINVTVREKFSPNK-TDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEI----TMDIDQQK 2207
            +E + + P  +  Q+    + +PP     ++ + V D NDN P    P+    +++E+   G  +    A D D   +    Y L    D+ +F++  +      +    SLD E    +  ++ A +    +    A+VT+TV D  D PP +    +   + EN    T +  +SA+  D   NV    + G  +  F IE   G I     +D     E+  F  ++V  N    S   +   +V++ V DVN++ P     +   SI E+ P   R +   +  TD DSG NG+V         K  + E        I+    ++     D E     S+ +   D G   LSSSV + + + DV+DN   F    +     E +E+G+ +  ++A D D+ S+     + +K     ELD +TG + S +VFDRE          +  +V   +   P    D A + + + D+NDN P+F + +Y  SVSE      Q+ +V A D D   NG + Y     +E    F VD   G+I L   LD E    + L++ ATD G     +++ TV V V+DENDNPP+F      +D    TRV    LI +T +D DT  +  +++    +        F ID  TG +     +D + Q+
Sbjct:  514 REELEEYPLVVQAQD----RGSPPLGSTAKVTVVVGDLNDNHPVFY-PVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTA-GDAARFQVNAVTGA---VSTRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGSVSASTLDLNANVTYLIVSGDQRGSFSIEWSGGRIFTANAID----REEQAFYQLRVVAN----SGGVAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFF--SVRATDKDSGKNGEV---------KYEIGEGNGGEKFGIFPDGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVNFELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNLTQLLRVTASDVDEGVNGALRYAINEGNE-GGKFTVDASTGQITLLGSLDREETASYTLVVSATDSGT-SPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRV-GELLITLTASDEDTGPSGDVRY---AIVAGNTHATFAIDRSTGSVFLARRLDFETQR 1146

HSP 5 Score: 111.309 bits (277), Expect = 5.074e-25
Identity = 172/647 (26.58%), Postives = 275/647 (42.50%), Query Frame = 3

Query:  150 GPRNKYHYSIVPESSVVSINQEGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNPIH-LTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE----PKCCXXXXXXXXXXXXXXHPPIWTV----LSWQVTIPENTPSNTQIMQLSATDSDS-TYNV-LRYSIEGPGQ-DLFLIEGPGI--IRLLGV---LDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPR-MYLGDMTVTDADSGINGDVSCLVAYPEDK--ISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNG-QPKLSSSVELFLRIKDVDDNNVKFIK-KFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKDLAFVE---LDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSF-SVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFK 2006
            GP    H++      +VS N+EG +   R   +     L    A+    +      + +++Q           R Q+ + V+D NDN P  + P +  ++ E + +G  L           L  +    L    D K     M+  + P       LD E    +T  L A +    P       V   +  +++ P I  V     +   ++ E+    T    ++ TD+DS T N  L  SI G  +   F++  PG+  +R+L V   LD E++      LT+  +DNG  +   +SAT ++ + V+DVND+ P   +     ++ E  P   Y+ D+T  DADSG+N  +   +    D    S+ ES         + T    D EV+S V + I   D G QPK ++   L + + DV+D    F + K+ AT V E    G F+  + A D D     ++ Y         + E   LD  TG V + +  DRE  +EY + V  +++ SP    +A + + + D+NDN P F  +  F S+ E +     +  V A DPD   NGTV Y     D  +F       G +     LD E + ++ L + A D GH +   S   V ++V D  D PP F 
Sbjct:   54 GPNGVNHHAY----KIVSGNEEGRLVPPRPVTKRAFLHL----ATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAAL---------RDLLHRGRGPLAVPFDPKT---GMVSTRQP-------LDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYN--LTILASDNG--KPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDESTGL------VTTDGKVDREVASSVVLNISAQDQGAQPK-TAYTSLTVTLLDVNDEPPLFTQTKYVATAV-ENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAARFQVNA-VTGAVSTRVSLDREERAVYQLQVTALDGGH-LRARSPAIVTITVADAQDTPPTFA 659

HSP 6 Score: 94.3597 bits (233), Expect = 7.031e-20
Identity = 161/620 (25.97%), Postives = 270/620 (43.55%), Query Frame = 3

Query:  354 SNPP--KRKQIEICVRDKNDNCPKLQNPIHL-------TMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELI---SSLDHETTTSHTCKLEACE---PKC-CXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLI---EGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRP-FIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAY---PEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIK-KFFATGVD-EGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGT--VVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDL-IPVTDNDTDTKNRQMQFNL 2120
             NPP   R    I + D NDN P ++  ++L       ++ ESA  G    L    D DSP  +  +  +     +++    +     P L ++   S LD E    +   + A +   P     TA + V V D NDH P + + ++   + E  P+ + +  ++A D+DS  N  LRYSI   G DL      E  G++   G +D E     ++ L +   D G   +  K+A  ++T+++ DVND  P F   K    +++ ++P +++  ++  D+D G NG V     Y   P+      E     +    + T  S D E      + +   D G P L S+ ++ + + D++DN+  F   ++FA+ ++ E              D+ +  ++ Y LT   D A  +++  TG V +    DRE +  Y++ VT  +         AI+ I + D  D  P F R  YSF V E       +G V+A   DL  N T  +V   QR       F ++   G+I     +D E Q  + L +VA   G     +   +V V V D N++ P F    +E+ I     V SR   +  TD D+  KN ++++ +
Sbjct:  201 GNPPLSGRATAVIQLLDVNDNDPAIRF-VYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGEL-SVSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVS-GNDLGWFSVDESTGLVTTDGKVDREV--ASSVVLNISAQDQG---AQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVR----YNFDPDMPAQYREMFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLT-AGDAARFQVNAVTGAVSTRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGSVSASTLDLNANVTYLIVSGDQRGS-----FSIEWSGGRIFTANAIDREEQAFYQLRVVANSGG----VAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSG-KNGEVKYEI 797

HSP 7 Score: 88.9669 bits (219), Expect = 3.685e-18
Identity = 97/375 (25.87%), Postives = 169/375 (45.07%), Query Frame = 3

Query:  720 HPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSI-EGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDM----TVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDL---AFVELDRQTGVVRSNQVFDRE-TKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXX---XPKFDRLYSFSVSE-RKEINFQIGKVNAEDPDLRNNGTVVYT 1799
            +PP +    +Q ++ E+  + TQ+++++A+D D   N  LRY+I EG     F ++   G I LLG LD E  E  +  L V  TD+G S     +A+ TV + V D NDN P      ++ S+D  +    +G++    T +D D+G +GDV   +       + +  + + +    +F +   D E      + +   D G+P  SS+  L + ++D +DN   F+       + E   IGT +  + A D D+  + E + +  +     A   +D ++G + +    DRE T   +++ V   +K  P  T  + L    + + D     P+F    +  V   R      +G + A DPD   N  V Y 
Sbjct:  968 NPPQFAKSVYQASVSESASNLTQLLRVTASDVDEGVNGALRYAINEGNEGGKFTVDASTGQITLLGSLDRE--ETASYTLVVSATDSGTSP---LAASCTVAVQVLDENDNPP--RFTESLLSVDA-LESTRVGELLITLTASDEDTGPSGDVRYAIVAGNTHATFAIDRSTGS----VFLARRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHVRDFNDNPPAFLPGDVFASIMENIPIGTRVITVTARDPDADVNGELHYSIARQFPPGAHFTIDPESGEICTAAEIDREVTGGLFEVTVRATDKAIPVHTRRSALKNVTVLVTDENDNAPRFVTPTAILVDGLRAAAGSVVGTLQASDPDEAENAAVRYA 1330

HSP 8 Score: 73.559 bits (179), Expect = 2.034e-13
Identity = 151/657 (22.98%), Postives = 257/657 (39.12%), Query Frame = 3

Query:  168 HYSIVPESSVVSINQEGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNPIHLTMIES--AKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHE------TTTSHTCKLEACEPKCCXXXXXXXXXXXXXXHP-PIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSI--EGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIF-LTVK------------VTDNGLSQSTIK---SATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRM-YLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSS-SFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDE-----GKEIGTFLAKIEAVDKDST--SSLEYYL-----TDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGH--PXXXXXXXXXXXXXXDENDNPPKFKS 2009
            H++I PES  +    E I R   G   E   + TD +   H + +  K                      + + V D+NDN P+   P  + +++   A  G  +   +A D D   ++   Y +     +  F+L   D +   +E  + LD E      T      + +A  P+        +      +HP P +         P++  S   ++Q       S+Y  LR+ +  E  GQ +F     G+ R  GV++      +  F LT +            + DNG + S I+   S+   V ISV DVNDN P   +      ++EN      +  ++ TDAD G N     LV Y    +S SE     +    +  +S   D E  +   + +  SD      ++   L + ++D +DN+ +F +  ++  V E     GK     +  + A D DS     + Y L     +D  D AF  L   TG +   +  DRE++  Y +     +      T    + +   + N    + D L +  V E       + +++A D D   N  + ++    D  +  F V   G++ + + LD E Q  ++L++  +DR    P   SS   V + + D NDN P F S
Sbjct: 1230 HFTIDPESGEICTAAE-IDREVTGGLFEVTVRATDKAIPVHTRRSALK---------------------NVTVLVTDENDNAPRFVTPTAI-LVDGLRAAAGSVVGTLQASDPDEAENAAVRYAVTGGDAAILFRL---DRRTGIIETSTELDRESGHGAFTLEVVAVEAKAAAPRTQRAENTIIANSMTFNHPLPRF---------PQDYESPINLLQGQTIPMPSSYLFLRHHLDWEPEGQLVFFTLLLGVTRGHGVINPLDAPWRVSFDLTARCMFIVFSSLLSSLRDNG-AGSFIRPPMSSFNQVEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDADQGQN----ALVTY--SVLSGSEGAFVVDAASGVLRASRRLDREERASYLLTVRASDGTH---ATDARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAF-GLHPVTGALNVTRPLDRESRACYVLRARATDGGGLAATARLYVNVLDANDNAPSVQNDSLAA-EVPEDAPPGTSLLRISATDDDEGVNAELEFSISSGDP-EGRFAVGNDGQLSVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTS 1838

HSP 9 Score: 69.3218 bits (168), Expect = 3.949e-12
Identity = 105/414 (25.36%), Postives = 180/414 (43.48%), Query Frame = 3

Query: 1011 VTISVSDVNDNRPFI---YIKNNIFSIDENVPRMYLGDMTVTDADSGING---DVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLY------SFSVSERKEINFQIGKVNAEDPDLRN-NG----TVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDI--GCHTRVISRDLIPVTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            V + V DVNDN P      +    F  D  V R  L D T  D D G NG       +V+  E+   +    ++      + T+   D E +   ++ +   D G P+    +++ + ++D +DN   F K  +   V E   +G              ++L   L   +    V  D +TG+V + Q  D E + +Y +++   +  +P  +  A  +I++LD+NDNDP    +Y      S SV E          V   D D    NG    ++V   +R         V  L  +++  +LD E  P+++L I+A+D G PV+RS+T +++V V D ND+ P+F    +   +  G       +D   VT  D D+  N +++++   +     +  F +D  TG +T D
Sbjct:    9 VRVVVGDVNDNAPSFPEPGVMEVAFKEDAAVGRQVLLD-TAVDRDVGPNGVNHHAYKIVSGNEEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVG--------------AALRDLLHRGRGPLAVPFDPKTGMVSTRQPLDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKD---VTAMDADSGLNAKLRYS---IVSGNDLGWFSVDESTGLVTTD 401

HSP 10 Score: 68.5514 bits (166), Expect = 6.454e-12
Identity = 78/286 (27.27%), Postives = 123/286 (43.01%), Query Frame = 3

Query:  357 NPPKR----KQIEICVRDKNDNCPKLQNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFP------QLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEG--PGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENV--PRMYLGDMTVTDADSGINGDVS 1160
            +PP R     ++ + + D NDN P   +P      E + +G  +   +AVD DS  +S   Y L  + +            F       ++ L+  LD E   S+   + A +   P    TA + VTV D ND+ P +    ++  I E+ P  T++++LSA D D   N  LRY I    P  D  L    G + +   LD E+    +  L V+  D G      +S T +V +++SDVND  P   +        EN   P + +  +   D D G +G V+
Sbjct: 1811 HPPARLSSAVRVSLILTDVNDNAPAFTSPRSALAPEDSPVGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPTGDFRLDPVLGTLAVARPLDRER--TASYELAVRARDGG---GPARSDTASVRVTLSDVNDCSPAFQLSPYTVHARENTQGPPVLILQVVARDDDLGSSGQVT 2091

HSP 11 Score: 49.6766 bits (117), Expect = 3.814e-6
Identity = 83/375 (22.13%), Postives = 171/375 (45.60%), Query Frame = 3

Query: 1233 IFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNN--VKFI---KKFFATGVDEGKEIGTFLAKIEAVDKDSTS-----SLEYYLTDKKDLAFVELDRQTG--VVRSNQVFDRETKDEYKINVTVREKFSP-NKTDSAXXXXXXXXXXXXXPKFDRLYSFSVS-ERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQ-LGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF-KSRYFEIDIGCHTRVISRDLIPVTDNDTD-TKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITM--DIDQQKTLTCEKLPKLIELKIRVFDPTFTEFKDHCVL 2300
            + T    D E   + ++ +  +D G P LS      +++ DV+DN+  ++F+       +  VDE    GT  A +   D DS +     S+     +++    +      G  V++     DRE    Y + +   +   P  ++ +A L++ + D+ND+ P+F      +   E       +  V A D D   N  + Y+    ++  + F VD+  G +    ++D E+     L I A D+G    +++ T++ V+++D ND PP F +++Y  +       +    ++ V+  D+D  +N  +++N     P+   ++FR+D+ TG++T    +D+++    E+ P +++ + R   P  +  K   V+
Sbjct:  177 VSTRQPLDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLGW-FSVDESTGLVTTDGKVDREVASSVVLNISAQDQGA-QPKTAYTSLTVTLLDVNDEPPLFTQTKY--VATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTGKVTTLKSLDREE---LEEYPLVVQAQDRGSPPLGSTAKVTVVV 544

[Close]

BLAST of Protocadherin 1 vs. Ensembl Sea Lamprey
Match: pcdh15b (protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1])

HSP 1 Score: 123.25 bits (308), Expect = 5.628e-29
Identity = 130/466 (27.90%), Postives = 226/466 (48.50%), Query Frame = 3

Query:  834 LRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFI----YIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQP---KLSSSVELFLRIKDVDDNNVKFIK-KFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLY--SFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRG-HPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDI---GCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITM 2189
            L+ S++G    +F +   GI R L +L     E +  +    +  +G+    + S    VTI V D NDN P      YI N   +    +P   +  +  +DADSG+NG+V   +      ++  + +   N +  + + +     +  R     V + +G P   + SS   +++ +   ++ +   +   F++  V E    G FL  ++AVD+++   +    +   D AF  L+  TG++   +  DRET+D+Y++ +T  +   PN T +A + + + D+NDNDP FD L   +FSV E +   F +G+V A D D   NG VVY+   LD Y   F +   G I     LD E Q  + L +VA+DR  +P  R ++  + +SV+D NDNPP F    + + +   G   +++ R  +  +D D D   R      Q++T + + KLF +D+ TG++ +
Sbjct:  443 LQVSLQG-ASAVFGVTSSGITRFLTLLQPLDRETRQQYSFTMMASDGV----LHSGPANVTILVLDANDNTPVFTSLSYIAN---AYSNMIPGDPVIQLLASDADSGVNGNVHYQI------LAGDQGQFVINNVTGLLSVAGPSGLLVGRTFTLTVQASDGAPPADRRSSIATVYVEVLPPNNQSPPSMPFSFYSMEVSEALSAGAFLLSVQAVDRENDPIVYSIKSGNPDGAFY-LNSSTGILSLWKSLDRETRDQYQLILTASDGH-PNGTSTATVAVLVTDVNDNDPTFDPLMPTNFSVYEGRTGVF-VGQVRATDKDAGMNGEVVYS---LDNYAAVFAIMANGSIYTKVALDREKQETYMLTVVASDRALYP--RHTSLPLAISVLDVNDNPPIFSQSVYNVTVPENGSPGQLVLR--LEASDADMDASTR-----YQLLT-AGMSKLFSVDDITGQLAV 878

HSP 2 Score: 86.2705 bits (212), Expect = 1.614e-17
Identity = 79/298 (26.51%), Postives = 133/298 (44.63%), Query Frame = 3

Query:  723 PPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEG--PGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRP-FIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVR 1607
            PP      + + + E   +   ++ + A D ++  + + YSI+   P    +L    GI+ L   LD E  ++  + LT     +G    T   +T TV + V+DVNDN P F  +    FS+ E    +++G +  TD D+G+NG+    V Y  D  +   + M++ +IY   T  + D E      + +V SD       +S+ L + + DV+DN   F +  +   V E    G  + ++EA D D  +S  Y L          +D  TG +   Q  D ET   +K  + V+
Sbjct:  615 PPSMPFSFYSMEVSEALSAGAFLLSVQAVDREN--DPIVYSIKSGNPDGAFYLNSSTGILSLWKSLDRETRDQYQLILTAS---DGHPNGT---STATVAVLVTDVNDNDPTFDPLMPTNFSVYEGRTGVFVGQVRATDKDAGMNGE----VVYSLDNYAAVFAIMANGSIY---TKVALDREKQETYMLTVVASDRALYPRHTSLPLAISVLDVNDNPPIFSQSVYNVTVPENGSPGQLVLRLEASDADMDASTRYQLLTAGMSKLFSVDDITGQLAVLQSLDYETTPGHKYTLLVK 897

[Close]

BLAST of Protocadherin 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004043.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004043.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 122.094 bits (305), Expect = 2.194e-28
Identity = 145/575 (25.22%), Postives = 261/575 (45.39%), Query Frame = 3

Query:  318 FGISIQENSIVKSNPP--KRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHT---CKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIEGPGQDLFLI-EGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVK-FIKKFFATGVDEGKEIGTFLAKIEAVDKDST---SSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDE---YQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNP 1994
            F ++++     +  PP   R    I V ++N   P+  +P + L++ E+   G  L    A D D+ ++   VY +     S  F ++        + L+  LD+ET   +    C  +       + + V+++V D ND+PP+     +   IPEN PS T ++ + A D+DS  N V  YS++    DLF++ +  G++   G LDYE   ++T  LTV+  +      T   +T  V + ++ VN+  P    +   F + E+ P    +G +  TD D+GI+G V  ++         S ++ +     +I  SS  D E  +  +++++  + G  +     E+ + +   D N+   F    +   V E   +GT +  + A D DS     +  + +          ++  TG++      DRE+   Y + V   +   P  T + ++++ + D+NDN P F    S  V+E +     +  + A DPDL  N    YT Q L     ++  F +   G ++  + +D E +P  HL +   D G P   +ST T+ +SV+D+NDNP
Sbjct:  721 FSVTVEARD--RGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASG---DVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVLTTQGFLDYET--KQTYELTVRAFN---YPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTG----EIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDANDPPVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGP-FLLTSSAKVTENQPAGMTVLNLEAGDPDLPPNKG-PYTFQLLGSDPAWRGYFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSP-PLTSTVTLHLSVLDQNDNP 1278

HSP 2 Score: 113.62 bits (283), Expect = 1.020e-25
Identity = 154/627 (24.56%), Postives = 275/627 (43.86%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE----PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIEGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKIS--LSESKMSSNTIYDIF----------TSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTR---VISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEI 2183
            + + V D+NDN P+     +   + E A IG  + L  A D D+ L++   Y L+       F    ++    Q+   +SLD E   S+  ++ A +    P    +A + V V D NDH P +    +    P + P+ T +  ++A D+D+  N  LR+S+ G     F ++   G+I     L   +     + LTV+V+D G   +  +SA  TVT+   D  +                  PR   G  + +  +    G    +VA    + +  +S    S   + D+F             + DHE      + +   D+G P  S+ ++L + + D++DN  +F    F   V E     T +  + AVDKDS     ++Y + D        ++  +G +RS    DRE    Y++ V   ++ SP +  +  +LI + D NDN P+F +++S  V E   + F + +V+  D D   N  + ++   L +   PF +    G+I + +RL+ E +  + + + A+D       + +T V + V D NDN P+F    + I+    +    +++R  +  +D D D  N Q+ F ++  T +     FR+   +GEI
Sbjct:   12 VTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLR--GGDGHFS---VNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQGPR---DDLTLTVRVSDGG---APPRSAVTTVTVRFRDAGE-----------------FPRFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVV-LTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFS---LLDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASDPAW----TVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVAR--VSASDAD-DGANGQVFFFMRSQTEN-----FRVGRDSGEI 594

HSP 3 Score: 90.1225 bits (222), Expect = 1.689e-18
Identity = 117/453 (25.83%), Postives = 198/453 (43.71%), Query Frame = 3

Query:  996 SATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGD----MTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNG-QPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLPKLIELKIRVFD---PTFTEFKDHCVLKLKLS 2315
            + TGTVT+ V D NDN P         ++ E+ P   +G     +  TDAD+G+N  +S  +   +   S++ S         I T++S D E      +++   D G  P LSSS  L + + DV+D+  +F+   +          GT +  + A D D+     L + L+      F  +D + GV+ + +   +  +D+  + V V +  +P ++ +   +          P+F     SFS  E +     I  V A     R  G V Y           F VD Q G++ + + LD+E Q  + L++ A D G P   S+   + V V+D NDN P+F S  F   +  +T    R ++ +T  D D+  N Q+ ++   +    +  +FR++  +GEI        TL  E +    EL ++  D   PT      HC +K+ +S
Sbjct:    7 TGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAP---IGSDVALVNATDADAGLNAIISYRLRGGDGHFSVNPSTGQ------IITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGF-SVDPRRGVIHAARAL-QGPRDDLTLTVRVSDGGAPPRS-AVTTVTVRFRDAGEFPRFAPGPRSFSFREDQPPGTTITVVAARSS--RRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFP-PFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTP--PRTIVVLTAVDKDSGINGQVDYS---IIDGNIGNVFRVNPNSGEIR----SVSTLDRENVASY-ELTVKATDRGSPT-----QHCTVKVLIS 429

HSP 4 Score: 84.3445 bits (207), Expect = 8.433e-17
Identity = 134/531 (25.24%), Postives = 226/531 (42.56%), Query Frame = 3

Query:  726 PIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRP-FIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTI---YDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFV-ELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTR---VISRDLIPVTDNDTDT-KNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLPKLIELKIRVFDPTFTEFKD 2288
            P +     +  +PE+ P  + +  ++ATD+D+  N ++ Y + G      +    G I     LD E  E  +  L V   D G +     S++ T+ ++V+DVND+ P F+      ++         +  +T  DAD+G NGD+         + SLS S  +  ++     +  ++         +++ +  SD G P  S+   + +R +D  +   +F     +    E +  GT +  + A        + Y+L    +L  V  +D Q+G V  ++  D E +  Y++ V  R+   P  +    L + +LDINDN P+F     ++          I  + A D D   NG V Y+    +           G+IR    LD E    + L + ATDRG P ++  T  V++SV DENDN P+F   +       H R    +   ++ V+  D D   N  + F+L  + PS     F I   TGEIT+     + L  E       +K+R  DP +T   D
Sbjct:   24 PRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDGHFSVNPSTGQIITTASLDREGRE--SYVLEVTALDGGPTPGL--SSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDL---------RFSLSGSASAGFSVDPRRGVIHAARALQGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEFP-RFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSP-TQHCTVKVLISVTDENDNSPRFTQIF-----SAHVREDAAVGFPVLRVSTLDADEGPNAAITFSL--LDPSL---PFSIHPSTGEITV----SRRLNREDRSGY-AVKVRASDPAWTVSTD 524

HSP 5 Score: 78.9518 bits (193), Expect = 4.768e-15
Identity = 118/469 (25.16%), Postives = 201/469 (42.86%), Query Frame = 3

Query:  765 ENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQ--DLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRL-YSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPL----------HHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDL-IPVTDNDTDTKNRQMQFNL 2120
            E+ P  T I  ++A  S     V  Y +   G   D+F ++   G + +   LD+E        L V+  D+G       SA   + + V D+NDN P          + EN P   +  +T  D DSGING V   +    D    +  +++ N+  +I + S+ D E  +   + +  +D G P    +V++ + + D +DN+ +F  + F+  V E   +G  + ++  +D D    +++ + L D   L F  +   TG +  ++  +RE +  Y + V   +   P  T S  + I + D+NDN P+F +  Y     E  E    + +V+A D D   NG V +  +   E  F    D  G+I   + L Y   P           +  ++ A DRG P   S  T  I  V+  N N P+F    +   +    R  +R L +   D D D  N Q+ +++
Sbjct:  243 EDQPPGTTITVVAARSSRRAGPV-SYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYE--LVVEARDSGFPPF---SAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVVLTAVDKDSGINGQVDYSII---DGNIGNVFRVNPNS-GEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRF-TQIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPS-LPF-SIHPSTGEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTE-NFRVGRDS-GEIHSVRPLRYR-DPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVV-PNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDV-NGQIAYSV 690

HSP 6 Score: 61.2326 bits (147), Expect = 1.095e-9
Identity = 111/538 (20.63%), Postives = 212/538 (39.41%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKLQNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFP--------QLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIEGPGQDLFLIEGPGIIRLLGVLDYE---------KLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENV-PRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRL-YSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFV--DQLGKIRLFQRLDYEIQPLHHLIIVA 1916
            ++ I V D+NDN P+        + E A +GF +     +D D                +     +++D   P        ++ +   L+ E  + +  K+ A +P    +  VT+ V D ND+ P +   ++ +  PE +     + ++SA+D+D   N  + + +    ++  +    G I  +  L Y           L + +  +T    D G       S+  TVTI++   N N P    +     +   V     + DM+  D D  +NG ++  V         +  +   +    +   +S   +  S  SV +   D G+P LSS     + + + +    +F        + E    G+ LA++ A D D+    ++ Y +         ++ R +G V      D ET+  Y ++V   +     KT+ + + I + D+NDN P  +   Y   + E       +  ++A D D  +N   +Y+   LD+ +   FV   + G +     LDYE +  + L + A
Sbjct:  425 KVLISVTDENDNSPRFTQIFSAHVREDAAVGFPVLRVSTLDADE-------------GPNAAITFSLLDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASDPAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTA--MDRGRPPL---SSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGN-----ASRRFDVDAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYS---LDDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRA 936

[Close]

BLAST of Protocadherin 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004042.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004042.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 122.094 bits (305), Expect = 2.374e-28
Identity = 145/575 (25.22%), Postives = 261/575 (45.39%), Query Frame = 3

Query:  318 FGISIQENSIVKSNPP--KRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHT---CKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIEGPGQDLFLI-EGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVK-FIKKFFATGVDEGKEIGTFLAKIEAVDKDST---SSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDE---YQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNP 1994
            F ++++     +  PP   R    I V ++N   P+  +P + L++ E+   G  L    A D D+ ++   VY +     S  F ++        + L+  LD+ET   +    C  +       + + V+++V D ND+PP+     +   IPEN PS T ++ + A D+DS  N V  YS++    DLF++ +  G++   G LDYE   ++T  LTV+  +      T   +T  V + ++ VN+  P    +   F + E+ P    +G +  TD D+GI+G V  ++         S ++ +     +I  SS  D E  +  +++++  + G  +     E+ + +   D N+   F    +   V E   +GT +  + A D DS     +  + +          ++  TG++      DRE+   Y + V   +   P  T + ++++ + D+NDN P F    S  V+E +     +  + A DPDL  N    YT Q L     ++  F +   G ++  + +D E +P  HL +   D G P   +ST T+ +SV+D+NDNP
Sbjct:  721 FSVTVEARD--RGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASG---DVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVLTTQGFLDYET--KQTYELTVRAFN---YPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTG----EIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDANDPPVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGP-FLLTSSAKVTENQPAGMTVLNLEAGDPDLPPNKG-PYTFQLLGSDPAWRGYFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSP-PLTSTVTLHLSVLDQNDNP 1278

HSP 2 Score: 113.62 bits (283), Expect = 1.122e-25
Identity = 154/627 (24.56%), Postives = 275/627 (43.86%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE----PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIEGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKIS--LSESKMSSNTIYDIF----------TSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTR---VISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEI 2183
            + + V D+NDN P+     +   + E A IG  + L  A D D+ L++   Y L+       F    ++    Q+   +SLD E   S+  ++ A +    P    +A + V V D NDH P +    +    P + P+ T +  ++A D+D+  N  LR+S+ G     F ++   G+I     L   +     + LTV+V+D G   +  +SA  TVT+   D  +                  PR   G  + +  +    G    +VA    + +  +S    S   + D+F             + DHE      + +   D+G P  S+ ++L + + D++DN  +F    F   V E     T +  + AVDKDS     ++Y + D        ++  +G +RS    DRE    Y++ V   ++ SP +  +  +LI + D NDN P+F +++S  V E   + F + +V+  D D   N  + ++   L +   PF +    G+I + +RL+ E +  + + + A+D       + +T V + V D NDN P+F    + I+    +    +++R  +  +D D D  N Q+ F ++  T +     FR+   +GEI
Sbjct:   12 VTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLR--GGDGHFS---VNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQGPR---DDLTLTVRVSDGG---APPRSAVTTVTVRFRDAGE-----------------FPRFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVV-LTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFS---LLDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASDPAW----TVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVAR--VSASDAD-DGANGQVFFFMRSQTEN-----FRVGRDSGEI 594

HSP 3 Score: 90.1225 bits (222), Expect = 1.810e-18
Identity = 117/453 (25.83%), Postives = 198/453 (43.71%), Query Frame = 3

Query:  996 SATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGD----MTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNG-QPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLPKLIELKIRVFD---PTFTEFKDHCVLKLKLS 2315
            + TGTVT+ V D NDN P         ++ E+ P   +G     +  TDAD+G+N  +S  +   +   S++ S         I T++S D E      +++   D G  P LSSS  L + + DV+D+  +F+   +          GT +  + A D D+     L + L+      F  +D + GV+ + +   +  +D+  + V V +  +P ++ +   +          P+F     SFS  E +     I  V A     R  G V Y           F VD Q G++ + + LD+E Q  + L++ A D G P   S+   + V V+D NDN P+F S  F   +  +T    R ++ +T  D D+  N Q+ ++   +    +  +FR++  +GEI        TL  E +    EL ++  D   PT      HC +K+ +S
Sbjct:    7 TGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAP---IGSDVALVNATDADAGLNAIISYRLRGGDGHFSVNPSTGQ------IITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGF-SVDPRRGVIHAARAL-QGPRDDLTLTVRVSDGGAPPRS-AVTTVTVRFRDAGEFPRFAPGPRSFSFREDQPPGTTITVVAARSS--RRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFP-PFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTP--PRTIVVLTAVDKDSGINGQVDYS---IIDGNIGNVFRVNPNSGEIR----SVSTLDRENVASY-ELTVKATDRGSPT-----QHCTVKVLIS 429

HSP 4 Score: 84.3445 bits (207), Expect = 9.112e-17
Identity = 134/531 (25.24%), Postives = 226/531 (42.56%), Query Frame = 3

Query:  726 PIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRP-FIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTI---YDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFV-ELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTR---VISRDLIPVTDNDTDT-KNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLPKLIELKIRVFDPTFTEFKD 2288
            P +     +  +PE+ P  + +  ++ATD+D+  N ++ Y + G      +    G I     LD E  E  +  L V   D G +     S++ T+ ++V+DVND+ P F+      ++         +  +T  DAD+G NGD+         + SLS S  +  ++     +  ++         +++ +  SD G P  S+   + +R +D  +   +F     +    E +  GT +  + A        + Y+L    +L  V  +D Q+G V  ++  D E +  Y++ V  R+   P  +    L + +LDINDN P+F     ++          I  + A D D   NG V Y+    +           G+IR    LD E    + L + ATDRG P ++  T  V++SV DENDN P+F   +       H R    +   ++ V+  D D   N  + F+L  + PS     F I   TGEIT+     + L  E       +K+R  DP +T   D
Sbjct:   24 PRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDGHFSVNPSTGQIITTASLDREGRE--SYVLEVTALDGGPTPGL--SSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDL---------RFSLSGSASAGFSVDPRRGVIHAARALQGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEFP-RFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSP-TQHCTVKVLISVTDENDNSPRFTQIF-----SAHVREDAAVGFPVLRVSTLDADEGPNAAITFSL--LDPSL---PFSIHPSTGEITV----SRRLNREDRSGY-AVKVRASDPAWTVSTD 524

HSP 5 Score: 78.5666 bits (192), Expect = 5.195e-15
Identity = 118/469 (25.16%), Postives = 201/469 (42.86%), Query Frame = 3

Query:  765 ENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQ--DLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRL-YSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPL----------HHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDL-IPVTDNDTDTKNRQMQFNL 2120
            E+ P  T I  ++A  S     V  Y +   G   D+F ++   G + +   LD+E        L V+  D+G       SA   + + V D+NDN P          + EN P   +  +T  D DSGING V   +    D    +  +++ N+  +I + S+ D E  +   + +  +D G P    +V++ + + D +DN+ +F  + F+  V E   +G  + ++  +D D    +++ + L D   L F  +   TG +  ++  +RE +  Y + V   +   P  T S  + I + D+NDN P+F +  Y     E  E    + +V+A D D   NG V +  +   E  F    D  G+I   + L Y   P           +  ++ A DRG P   S  T  I  V+  N N P+F    +   +    R  +R L +   D D D  N Q+ +++
Sbjct:  243 EDQPPGTTITVVAARSSRRAGPV-SYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYE--LVVEARDSGFPPF---SAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVVLTAVDKDSGINGQVDYSII---DGNIGNVFRVNPNS-GEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRF-TQIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPS-LPF-SIHPSTGEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTE-NFRVGRDS-GEIHSVRPLRYR-DPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVV-PNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDV-NGQIAYSV 690

HSP 6 Score: 61.2326 bits (147), Expect = 1.212e-9
Identity = 111/538 (20.63%), Postives = 212/538 (39.41%), Query Frame = 3

Query:  375 QIEICVRDKNDNCPKLQNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFP--------QLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSIEGPGQDLFLIEGPGIIRLLGVLDYE---------KLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENV-PRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRL-YSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFV--DQLGKIRLFQRLDYEIQPLHHLIIVA 1916
            ++ I V D+NDN P+        + E A +GF +     +D D                +     +++D   P        ++ +   L+ E  + +  K+ A +P    +  VT+ V D ND+ P +   ++ +  PE +     + ++SA+D+D   N  + + +    ++  +    G I  +  L Y           L + +  +T    D G       S+  TVTI++   N N P    +     +   V     + DM+  D D  +NG ++  V         +  +   +    +   +S   +  S  SV +   D G+P LSS     + + + +    +F        + E    G+ LA++ A D D+    ++ Y +         ++ R +G V      D ET+  Y ++V   +     KT+ + + I + D+NDN P  +   Y   + E       +  ++A D D  +N   +Y+   LD+ +   FV   + G +     LDYE +  + L + A
Sbjct:  425 KVLISVTDENDNSPRFTQIFSAHVREDAAVGFPVLRVSTLDADE-------------GPNAAITFSLLDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASDPAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTA--MDRGRPPL---SSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGN-----ASRRFDVDAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYS---LDDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRA 936

[Close]

BLAST of Protocadherin 1 vs. Ensembl Nematostella
Match: EDO40470 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S751])

HSP 1 Score: 145.206 bits (365), Expect = 3.129e-35
Identity = 183/608 (30.10%), Postives = 290/608 (47.70%), Query Frame = 3

Query:  354 SNPPKRKQIEICVRDKNDNCPKL--QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSL---------DHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPG--QDLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNI---FSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKD----LAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF-----KSRYFE-IDIG---CHTRVISRD 2060
            S PPK   + + V+D NDN P         L + E+ K  F+  L  AVD+D   +S   Y +        FKL  I  +    +L + L         D E   S+   + A +   P       +++TV D ND+ P ++ +S+  TIPEN    T I+Q+SA+D D   N  ++YSIE     Q +F I    G+I     LDYE   +++  + VK  D G S     S++  V I V DVNDN P I++   +   + + EN      +  ++V+DADSG NG+V+  +   +   S+    ++  +I  I    S D E      +K VC D G P  ++     + + DV+D   KF +  + T V E   + T +A + AVD+D  S S L Y + +  +    L +  +D  +G++ +    DRE   +  + V V ++ SP  +D+  +++ + D NDNDP F++  Y+ S+ E       + ++ A+DPD+  N  ++Y+   +     PFF+D + G +   + LD+E+Q  +   + ATD G    RS   TV VS+ D NDN P F        YFE   IG   C  + I RD
Sbjct:   36 STPPKSYTVLVYVQDLNDNSPSFVRGTSAKLVVFENDK-DFRQKLI-AVDSDFGSNSTQSYTIVSGNVGNVFKL--ISKRDTDGDLYADLVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSIETHSDPQAIFGIHPTTGVIVNNVRLDYEA--KRSYLIVVKAEDKGSSHQL--SSSAIVRIEVLDVNDNNPVIHVSYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTLEGGDGYFSMKFDVLNDESI--IAVGQSLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWENATVNTLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGENSLILYS---ILTPNTPFFLDPRKGLVTNSRTLDHEVQSSYTFQVAATDGGG---RSCNATVHVSLTDLNDNQPVFDPSSYSVEYFENTRIGQSICQLKAIDRD 627

HSP 2 Score: 122.865 bits (307), Expect = 2.283e-28
Identity = 159/554 (28.70%), Postives = 259/554 (46.75%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDL-KCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDS-TYNVLRYSI-EGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRP-FIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEY-YLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRN-NGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF 2003
            + I V D ND  P       + T+ E ++    +    A+  D   +++ VY + K N D+      ++ N    L L S +DHE   S    ++A +   P     A VT+ VID ND+ P +   S  V +PE+TP       +S  D+DS     + +S+   PG    L    G + L  ++DY     ++  L V+  D G   S  +S+T  + + V DVND  P F         ++   P   + ++  TD DSG NG +S    Y  D   +  SK        IF  S  D E     ++K++  D+G P+ SSS ++ + + DV+DNN  F +  +A  V E + + T+L  + A D D  S+    Y  D +   F+ +D+QTG + ++QV DRE K  Y  ++   +  S  + D   + + + D+ND  PKF +  YS +V+E   +   +  + A D D +  N  + Y    +      F ++Q+ G + L   LD E+   H L +VA+D+G   S  + T + ++V+D NDN P F
Sbjct:  689 VNITVLDVNDEPPIFSKAEYNFTIQEHSQALSVIGHVHAISRDKGTNAEVVYSISKGNTDN-----IVLINSTGTLYLQSEVDHEKIPSLYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQFNSSSILVRLPEDTPIGHTFYTVSVFDADSGVLGRVSFSLLSNPGTLFNLDSNTGALSLTKLIDYGN-SARSYTLPVQAQDGG---SPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRIS----YAFDS-KVDTSKFGLRNGGKIFIKSKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKENEPVATYLGAVSASDSDEGSNGHVTYRFDTQVAQFI-VDKQTGKITTSQVLDREAKASYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITY---MIVAGPKAFSLNQVTGVLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVF 1224

HSP 3 Score: 117.087 bits (292), Expect = 1.759e-26
Identity = 154/535 (28.79%), Postives = 240/535 (44.86%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSI-EGPGQDLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDV--SCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFV-ELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRL-YSFSVSERKEINFQIGKVNAEDPDL--RNNGTVVYTQQRLDEYQ--FPFFV--DQLGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            ++I ++D NDN PK  +     ++E     F++    A+D D+       Y +  + D+ KF L   D K   L+LI SLD+E    +T  + A +   P      +  V V+D ND+PP +T   +  T+ EN P+ T +++++A D DS  N  L YSI  G   D F I+   G+I    +LD EK  + T FLTV  T  G+S     S+T +V I+V D NDN P          + EN P   +  +TV D D G N  V  S +    +   ++  S        ++ T++  D E  +   + +   D   P  ++   + + I+D +DN   F +  +++ + E    GT +  + A DKDS S+     T   D   V  +D +TG+V S   F+   K EY      +++    K     + IKI D N++ P+F +  Y   +      +  +  V A D D     NG V Y   RLD+ +     FV     G +R         Q  H L I+A D G P
Sbjct: 1424 LKIIIQDLNDNAPKFVSRNLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRI-VSPDTGKFSL---DLKTGVLKLIGSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGVEMDKFSIDKHSGLIVTNSILDREK--KDTYFLTVHAT--GVSYPFRVSST-SVRINVMDRNDNPPKFISPVVTLKVPENSPARLIYTLTVQDLDYGNNTKVLYSIMSGNTDGAFTIGRSTG------ELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLSNDTYGVYSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQGQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVTMVTATDADTDKSTNGKVTY---RLDDSKNSTSLFVVESNTGSVRTSAGFSNPPQGRHALYIIAEDHGSP 1940

HSP 4 Score: 115.546 bits (288), Expect = 4.770e-26
Identity = 175/693 (25.25%), Postives = 293/693 (42.28%), Query Frame = 3

Query:  150 GPRNKYHYSIVPESSVVSINQ-EGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNPIHL-TMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEAC-----EPKCCXXXXXXXXXXXXXXHPPI--WTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSI--EGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPE-DKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLE--YYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDT-KNRQMQFNLQMVTPSYLMKLFRIDNQTG 2177
            GP +   Y IV      S+NQ  G++      DRE   +        H    V     G    E             IEI V D NDN P   N     T+ E   IG  +    AVD+D   + K  Y +        FK   I+     +  + +LD E T  +  ++ A      + K     V       +++ P      +++W   I EN P NT +  + A D DS  N  + Y+I  + P     +    G+I+    +D E++ E +  L V+ TD   ++      T T+ I + D+NDN P    +N  + +++      +  +T  D D+G  G+V   +  P+  K SL    + +  +  I    S D+E   + ++ I  +D G P L+S     + + DV+DN  +F +  F   V E K  GT + K+ A D+DS S+ E  Y +    ++    +D+ +G++ +N + DRE KD Y + V       P +  S  + I ++D NDN PKF   + +  V E       I  +  +D D  NN  V+Y+    +           G++    +LD E +  + L + A D   P   ++   + + + D+NDNPP F+   +   I   T      ++ +T +D D+  N  + + L   T      ++ ID++TG
Sbjct: 1150 GPNSDITYMIVAGPKAFSLNQVTGVLTLVSPLDREVTHR--------HILHVVASDKGGNQSLE---------TITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFK---INETTGVISTLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPIITW---IYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSPRAHFKINSETGLIQTTHPIDREEISEYS--LKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKFVSRNLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIVSPDTGKFSL---DLKTGVLKLI---GSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGVEMDKFSIDKHSGLIVTNSILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISPVVTLKVPENSPARL-IYTLTVQDLDYGNNTKVLYSIMSGNTDGAFTIGRSTGELSTTTKLDRETKASYQLSVQAKDI-TPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPP-GTSILNLTASDKDSGSNGNIVYTLSNDT----YGVYSIDSRTG 1804

HSP 5 Score: 112.849 bits (281), Expect = 3.032e-25
Identity = 168/564 (29.79%), Postives = 263/564 (46.63%), Query Frame = 3

Query:  369 RKQIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXXXXX----HPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSI-EGPGQDLFLI-EGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFS-IDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNG---QPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQ-LGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKS 2009
            + Q+ + VRD ND  PK  +N   +T+ E   +G  L    A D+D    +  +  +   A  K F L  +      L L+S LD E T  H   + A +     +      +  +      + P++   +   T+PE  P  + +  + A DSD   N  +RY I  G     F I E  G+I  L  LD+E        L V  TD G  Q   K++   VTI V D NDNRP  + KN I + I ENVP    +  +   D DSG+N  +   +   + +   +  K++S T   I T+   D E  S  S+K+  +D     Q +L ++  L + I+D++DN  KF+ +   T V E +     +  I A+D D+    ++EY +    D     LD +TGV++     D E   +Y ++++  +  SP  T   +  + ++D+NDN P+F R L+  +VSE K     + KV A D D  +N  + Y+     E    F +D+  G I     LD E +  + L + AT   +P  R S+T+V ++V+D NDNPPKF S
Sbjct: 1102 KTQVTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIV-AGPKAFSLNQVTGV---LTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFKINETTGVISTLRALDFEVTNR--YVLRVSATDMGKKQQ--KTSYQLVTIYVEDANDNRP-TFDKNPIITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTI---DSQSPRAHFKINSETGL-IQTTHPIDREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKFVSRNL-TYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIV-SPDTGKFSLDLKTGVLKLIGSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGVEMD-KFSIDKHSGLIVTNSILDREKKDTYFLTVHATGVSYP-FRVSSTSVRINVMDRNDNPPKFIS 1648

HSP 6 Score: 91.6633 bits (226), Expect = 8.795e-19
Identity = 160/638 (25.08%), Postives = 283/638 (44.36%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQNPIHLT----MIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCK---LEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQD-----LFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMY-LGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTS-SLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRL-YSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVI-SRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD--IDQQKTLTCEKLP 2231
            + I V D NDN P +     L     + E+A IG ++      D DS  + +    L+        K  +++++   + +  SLD ET      K   ++  +P         + V D ND  P +   +++  + EN   NT +  ++A D D   N  L Y+I    +       F I+   G+I     LD E++ +  + LTV V D G   S   S   +V ++++D NDN P+    +   S+ EN P    +  +   D D G N  +   +  P     L   K        +  S + DHEV S  + ++  +D G    +++V + L   D++DN   F    ++    E   IG  + +++A+D+DS   ++  ++ ++ +   V     +G++   ++ DRET+D Y + V   +    +  + AI+ I +LD+ND  P F +  Y+F++ E  +    IG V+A   D   N  VVY+  + +       ++  G + L   +D+E  P  +L + A D+G P        V ++VID NDN P+F S    + +   T +  +   + V D D+    R + F+L +  P     LF +D+ TG +++   ID   +     LP
Sbjct:  265 VRIEVLDVNDNNPVIHVSYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTLEGGDGYFSMKFDVLNDE-SIIAVGQSLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWENATVNTLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQIPQ--VVLTVLVHDRG---SPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGENSLILYSILTPNTPFFLDPRKGL------VTNSRTLDHEVQSSYTFQVAATDGGGRSCNATVHVSL--TDLNDNQPVFDPSSYSVEYFENTRIGQSICQLKAIDRDSPKFAITRFIIEQGNADEVFSVDGSGLITLAKLLDRETQDNYLLTVKAVDGGGQDSVNKAIVNITVLDVNDEPPIFSKAEYNFTIQEHSQALSVIGHVHAISRDKGTNAEVVYSISKGNTDNI-VLINSTGTLYLQSEVDHEKIPSLYLTVQAKDKGTP-PLFGYANVTIAVIDINDNSPQFNSSSILVRLPEDTPIGHTFYTVSVFDADSGVLGR-VSFSL-LSNPG---TLFNLDSNTGALSLTKLIDYGNSARSYTLP 881

HSP 7 Score: 85.5001 bits (210), Expect = 7.892e-17
Identity = 164/637 (25.75%), Postives = 265/637 (41.60%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQNPIHLTMI---ESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEA---CEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRP-FIYIKNNIFSIDENVPRMYLGDMTVTDADS--GINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFA-TGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGV--VRSNQVFDRETKDEYK--------------------INVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQ-LGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMV-TPS-YLMKLFRIDNQTG 2177
            + I V D+NDN PK  +P+    +     A++ + L +Q   D D   ++K +Y +        F    I     +L   + LD ET  S+   ++A     P     A +T+ + D ND+PP++    +  TI E TP  T I+ L+A+D DS  N  + Y++      ++ I+   GI+      +    +E   F   K  D G      K A   V I + D N++ P F      +           +  +T TDAD+    NG V+  +   + K S S   + SNT   + TS+ F +    R ++ I+  D+G P L     + + I ++ D+  +F+ +  A   + E  ++G+++  + A            ++  K  AF  +D  TGV  V S    D E+   ++                    INV  R   SP    S +L     D     P+F                 + KV A D D   NG V Y+    +E    F +D   G+I   + LD E      L+I  TD G P  +S+   V V V D NDNPP F     E++I   TR  +  +  V   DTD ++R + +NL+   TP   ++++   D  +G
Sbjct: 1632 VRINVMDRNDNPPKFISPVVTLKVPENSPARLIYTLTVQ---DLDYGNNTKVLYSIMSGNTDGAF---TIGRSTGELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLSNDTYGVYSIDSRTGIVYSAARFETSIKQEYNFFCIAK--DQGQDP---KMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVTMVTATDADTDKSTNGKVTYRL--DDSKNSTSLFVVESNT-GSVRTSAGFSNPPQGRHALYIIAEDHGSPPLRGYGIVQIVIGNIQDDPPRFLNQTPARVSIPENSKVGSYITTVRARASSDAQVTYSIISGNKGRAFY-VDPFTGVISVASADALDYESTKNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPRF-----------------VVKVTATDVDSGTNGKVTYSIWTGNEAGV-FTIDSTTGEITTAKLLDRETTASFDLVIRGTDSGIP-PKSTNCQVKVVVTDLNDNPPLFDP-LSEVNIREDTRTGAV-VTSVVATDTDKESR-LTYNLKSASTPGIAILRVSATDQDSG 2231

HSP 8 Score: 81.6481 bits (200), Expect = 1.210e-15
Identity = 150/570 (26.32%), Postives = 241/570 (42.28%), Query Frame = 3

Query:  354 SNPPKR--KQIEICVRDKNDNCPKLQNPIHLT-MIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADS-GINGDVSCLVAYPEDKISLSESKMSSNTIYDIFT-SSSFDHEVSSRVSVKIVCSD-NGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSP-NKTDSAXXXXXXXXXXXXXPKFDRLYSFS-VSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXX--XXXXXXXXXXXXDENDNPPKFKSR 2012
             +PP+     +E+ V D ND  P   N  +   ++E+      +    A D DS  + +  Y      D+ KF L      F    + S LD E    +  K+ A +   P+   +A V V V D ND+ P +   S+   + EN P  T +  +SA+DSD   N  + Y  +       + +  G I    VLD E   + +   ++  TD G S    K+    VT+ V DVND  P         +++E++P    L  +  TD D  G N D++ ++       SL       N +  + T  S  D EV+ R  + +V SD  G   L +   + + + DV+DN   FI +     V E   IG+ +A + AVD D      + Y + +       +++  TGV+ + +  D E  + Y + V+  +      KT   ++ I + D NDN P FD+    + + E   IN  +  + A D D   N  + YT              + G I+    +D E    + L + ATD+         +T T+ + + D NDN PKF SR
Sbjct:  888 GSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRISYAFDSKVDTSKFGLRNGGKIF----IKSKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKENEPVATYLGAVSASDSDEGSNGHVTYRFDTQVAQFIVDKQTGKITTSQVLDREA--KASYVFSIVATDGGSSPRVDKTQ---VTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVAGPKAFSL-------NQVTGVLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFKINETTGVISTLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPIITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSPRAHFKINSETGLIQTTHPIDREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKFVSR 1441

HSP 9 Score: 78.1814 bits (191), Expect = 1.245e-14
Identity = 157/635 (24.72%), Postives = 266/635 (41.89%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKLQNPIHLTMIESAKIGFK---LPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDS----TYNVLRYSIEGPGQDLFLIEGPGIIRL-LGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVS-DVNDNRPFIYIKNNIFSIDENVPRM--------------------YLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSF---------------DHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSS--LEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYS---FSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHH--LIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIP-VTDNDTDTKNRQMQF 2114
            ++I V D+NDN P       L  +      FK   +    A D DS  + K  Y +    ++  F    ID+   ++     LD ETT S    +   +   P       V V V D ND+PP++  LS +V I E+T +   +  + ATD+D     TYN+   S             PGI  L +   D +      I  +  +T++      I + TG ++   + DV     FI I   + ++D+ VP                      Y G +     ++ + G     V   ++   L   ++S    Y+I  S+ F               D+E   R  + +   D+  P     V +++ + DV+D    F +  +     EG  +GT +  + A DKDS ++  + + +    D     +DR+TGV+R+ +  D ET   + ++V   ++ SP       + I++LD+NDN P F R+       V E   +N ++ ++NA D D   N  + +T       Q  F +D+  G +      DYE   ++   L I ATD G+P   SS  T+IV+V DE++  P F    ++ D+  + ++   D +  VT  D D+ ++   F
Sbjct: 2053 LDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPRFVVKVTATDVDSGTNGKVTYSIWTGNEAGVF---TIDSTTGEITTAKLLDRETTASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDNPPLFDPLS-EVNIREDTRTGAVVTSVVATDTDKESRLTYNLKSAST------------PGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKIDADTGVISARRTIDVRIRDSFIQIP--VQAMDQGVPPQRALVYVRIIITREPKFELPSYFGKV----PENAMMGTSVLTVRVTDNAAGLPLGRIS----YNIENSNYFRIGQRSGVISVNKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDKGSFAIDRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVF-RVPGPNDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIG-GTGQGLFLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNP-PLSSNITIIVNVADEDEYDPSFNRMDYKFDVPGNAKI--GDFVGQVTATDRDSGDQGRVF 2656

HSP 10 Score: 55.8398 bits (133), Expect = 7.998e-8
Identity = 118/553 (21.34%), Postives = 219/553 (39.60%), Query Frame = 3

Query:  192 SVVSINQEGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNPIHLTMI-ESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNK----FPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSD---STYNVLRYSIEGP--GQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRP-FIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSN-----------TIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKF--IKKFFATGVDEGKEIGTFLAKIEAVDKDSTSS--LEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPD 1769
            S++S N +G     R T         +LS +        K  + +S+Q   I          I I + D+NDN P  Q  ++ + I E    G  +    A D DS  +   VY L  +     + +  ID++    +      +S+  E       K +  +PK      V + + D N+H P +T   ++V I  NT ++  +  ++ATD+D   ST   + Y ++       LF++E   G +R              +++  +  D+G   S      G V I + ++ D+ P F+       SI EN               S +   ++ + A       ++ S +S N            +  + ++ + D+E +    + +V +  G   L+  + L + + D +DN+  F           D G     F+ K+ A D DS ++  + Y +    +     +D  TG + + ++ DRET   + + +   +   P K+ +  + + + D+NDN P FD L   ++ E       +  V A D D
Sbjct: 1683 SIMSGNTDGAFTIGRSTG--------ELSTTTKLDRE-TKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLSNDT----YGVYSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQGQDPKMA-IVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVTMVTATDADTDKSTNGKVTYRLDDSKNSTSLFVVESNTGSVRTSAGFSNPPQGRHALYIIAE--DHG---SPPLRGYGIVQIVIGNIQDDPPRFLNQTPARVSIPEN---------------SKVGSYITTVRARASSDAQVTYSIISGNKGRAFYVDPFTGVISVASADALDYESTKNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPRFVVKVTATDVDSGTNGKVTYSIWTGNEAGVFTIDSTTGEITTAKLLDRETTASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDNPPLFDPLSEVNIREDTRTGAVVTSVVATDTD 2201

[Close]

BLAST of Protocadherin 1 vs. Ensembl Nematostella
Match: EDO46189 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQM0])

HSP 1 Score: 137.117 bits (344), Expect = 9.185e-33
Identity = 177/622 (28.46%), Postives = 284/622 (45.66%), Query Frame = 3

Query:  369 RKQIEICVRDKNDNCPKLQNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFT-----SSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTS--SLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRL--DEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRY-FEI-DIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITM 2189
            R  + I V+D+NDN P+     ++  I       ++ +  A D DS  ++   Y L    +  KF   M+++K  ++  ++ LDHET  S+T ++ A + K   T V  +TV D ND+ P + +  ++  + E+    + + QL+A D D   N  L YS+       F ++  G+IR  G  D E      + L  +  D G   S  +S   TV I + DVNDNRP         S+DE+V     +  +T +D D+G N D+         + S +    +     D  T     S S D E  S  ++ +  +D G P L+ +  L + + D++DN   F    + + V E    GT   ++ A D+DS++  +L + +    D     +D  TG++   +  D E K  Y + V  R++  P K D+A + I I D+ND+ P F    YS  + E   I   +  V A D D    G + Y   RL     +  F +D   G IR+   LD E  P + L + A D     SRSS+T V +++ D NDN P F+  Y F + +       I +  +  TD D D+ N  +++ L   T      +F I+  TG IT+
Sbjct:   53 RTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQVAIVTATDRDSGTNAAITYSLFSGEN--KF---MMNSKTGEIRTVTPLDHETKDSYTMRISAFDGKHT-TFVPLITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTVDSQGVIRTKGAFDRETKASYQVAL--RAQDGG---SPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADL---------RYSFTSGNTNHAFTLDAVTGVVTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGT---QVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEY---RLISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDG-GSTSRSSSTRVTIALQDINDNSPIFQGPYVFRVSESSSPGHQIGQ--VAATDAD-DSSNGDVRYALSDNT-----DVFSINTSTGLITL 639

HSP 2 Score: 129.028 bits (323), Expect = 3.313e-30
Identity = 177/632 (28.01%), Postives = 294/632 (46.52%), Query Frame = 3

Query:  150 GPRNKYHYSIVP-ESSVVSINQEGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNPIHLTMI-ESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYS-IEGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIF-LTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDEN-VPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSS--LEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF 2003
            G   +  YS+V  ++S  +++ +G+IR K   DRE                   K  + ++++       +   +  +EI + D NDN P   +  +   + E   IG  +    A D D+  ++   Y       +  F L  +      + +  SLD E  +S+   L   +   P   DT+ + + V D ND+PP+++  ++Q  + ENTP+ TQ+   SATD DS+ N  L +  I+G    +F I+G  GII +    DYE    KT + LTV+  D G+    +K  T  VTI + DVND+ P     N    I E+ V    +  +T TD DSG  G +   +     K + +    S +    I  SS  D E +   S+++   D G    SSS  + + ++D++DN+  F +  +   V E    G  + ++ A D D +S+  + Y L+D  D+    ++  TG++      D E K +Y + VT ++  +P+++   ++ + + D+NDN P+F + LY+ +V E       +  V A D D   NG + Y+    +E    F +D+  G+I     LD E    + L I A D G  V   + TTV +S+ DENDN P F
Sbjct:  198 GINARLSYSLVSGDTSYFTVDSQGVIRTKGAFDRE------------------TKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGV---VTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGTQV---SATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPDYEN---KTRYDLTVQARDRGVP---VKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGS----IRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIF-QGPYVFRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDNTDV--FSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNE-NMAFAMDRFTGEITTRVPLDRETIASYSLTINA-DDGSLVRFMAATTVNISIADENDNQPTF 790

HSP 3 Score: 128.257 bits (321), Expect = 4.396e-30
Identity = 167/626 (26.68%), Postives = 286/626 (45.69%), Query Frame = 3

Query:  363 PKRKQ---IEICVRDKNDNCPKLQNPIHL-TMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEP---KCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSI--EGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSI----DENVPRMYLGDMTVTDADSGINGDVS-CLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDL-IPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITM 2189
            P R     +++ V D NDN P+    ++  T+ E+   G  +    A D DS  + K  Y +    ++  F +   D    ++     LD ET  S++  + A +    +      V +++ D+ND+ P +T  S +  I E++P+ T++ QL+ATD D   N  + Y+I     G    L    GI+ +   LD E +   T  L VK +D G  Q +I   T ++ +SV DVNDN P    + ++FS     D +V    L  + V D D G NG ++  L     D  ++  +         + + +  D+E ++   + +   D G P  S++ ++ + I +V+DN   F+     T + E   I T + K+ A D D T  L + + +    +  ++D+ +G++   +  DRET   Y + V   E  S  ++      I++LD+NDN P F+   Y+ S+ E   I   + KV A D D   N  V Y     D  +F       G +   + LD E Q  + L + A D G P S+S+   + +++ D NDN P+F    + + +  +T   S  L +  +D D     R       +++ ++    FRID+ TG IT+
Sbjct:  663 PSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAM---DRFTGEITTRVPLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGPS-RFNISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRETIPSYT--LVVKASDAGSPQQSI---TASIHVSVLDVNDNAP--RFEKSLFSGEIREDASVHSTVL-QVKVEDKDEGSNGAITLSLSGEGSDNFTIDSTGF-------VLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAINTHVVKLNATDSDGT-PLTFDIVEGNAGSSFKIDQSSGLISVAKRLDRETTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAPVFNPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKFEVN-PATGLVTTKRPLDREDQASYSLRVTAMDHGKP-SQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGR---VTYSIISGNH-GNAFRIDSTTGRITV 1262

HSP 4 Score: 127.102 bits (318), Expect = 1.109e-29
Identity = 174/616 (28.25%), Postives = 286/616 (46.43%), Query Frame = 3

Query:  384 ICVRDKNDNCPKLQNPIHLTMI-ESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEA---CEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSI-EGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGD-VSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDST--SSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRV-ISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDI 2195
            I V D NDN P     ++ T + E   +G  +    AVD D  ++++  Y L  + D+  F    +D++   +    + D ET  S+   L A     P     A V + ++D ND+ P+++   +  ++ E+      ++ ++A+D D+  N  LRYS   G     F ++   G++ +   LD+E  +  +  L + VTD G   S   + T  + I+V+D+NDN P          + EN P      ++ TD DS  NG  V  ++   +D +   +    S  I  I  + S D+E  +R  + +   D G P    + ++ + I+DV+D++  F    ++  + E   IG+ +  + A D DS     LEY L          +D  +G +R +   DRET   Y + V  R+  S +++ S  + I + DINDN P F   Y F VSE      QIG+V A D D  +NG V Y    L +    F ++   G I L  +LDYE +  + + + A D G P SRSS T V V V D NDNPP+F    +   +G +    ++   +  TD D+    +    +  +++ +  M  F +D  TGEIT  +
Sbjct:  156 ITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSL-VSGDTSYF---TVDSQ-GVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGVVTVSRSLDFE--QRSSYALGLSVTDRG---SPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGT--QVSATDRDSSTNGALVFGIIKGNDDGVFTIDG---STGIISI--AKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGPYVFRVSESSSPGHQIGQVAATDADDSSNGDVRYA---LSDNTDVFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTP-SRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGK---ISYSILSGNENMA-FAMDRFTGEITTRV 746

HSP 5 Score: 122.865 bits (307), Expect = 2.377e-28
Identity = 164/625 (26.24%), Postives = 286/625 (45.76%), Query Frame = 3

Query:  192 SVVSINQEGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPP--KRKQIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-VLRYSI-EGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRL-YSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDI 2030
            S++S N     R    T R  +  + D       +EA+      IS +++ +    PP      + I V D+NDN P    N     + E   IG ++ +  A D D   +++  Y +    D+  F +  ++     L +   ++ ET  ++T  + A +   P       +TV V D ND+PP++   S+  ++ EN+  +T ++ ++A DSD   N VLRYSI  G  +  F I    G+I     LD+E  E+    L V  TD   S+ T K+    VTI V ++ND  P    +N   S+ EN P    +  ++ +D DS  +   S +     DK S+ +          I T+   D E+ S  ++++  +D G P LS+   + ++I D +DN+ KF    +++ + E     +F  K+ A D D  ++        ++ AF+ +   +GV+   Q  DRE K  Y + +  R+  +P +  S  + + ++DIND+ P  +      SV E +     + ++ A D D   N  + ++    +E++  F +D   G I     LD E Q ++ L I   D+G+P   S    +I  + DE+DN P+F+   + + I
Sbjct: 1241 SIISGNHGNAFRIDSTTGRITVVGVVD-------REALASYNLTISAKDSGV----PPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSI-VRGDTSAFAINAMNGV---LTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLDFE--EKSQYGLEVTATD---SKYTAKT---NVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDSFGSLSYSIVGGKDSDKFSIDQRSGI------ISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYNLSRNDAFM-IGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVMRILASDADTGLNAELTFSLLS-NEHKSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVI-DEDDNCPRFQPTEYNVTI 1833

HSP 6 Score: 122.865 bits (307), Expect = 2.418e-28
Identity = 171/632 (27.06%), Postives = 278/632 (43.99%), Query Frame = 3

Query:  150 GPRNKYHYSIVPESSVVSIN---QEGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDL-FLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPR-MYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQ-LGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF 2003
            GPR +  Y ++  +   + N     G IR     DRE                      + + ++      ++     ++ I ++D NDN P  Q P    + ES+  G ++    A D D   +    Y L  N D     +  I+     + L + LD+E  T +   + A +   P      VV V V D ND+PP +    +  T+ EN  +   +  ++ATD+DS  N  + YSI    +++ F ++   G I     LD E +   +  LT+   D  L +    +AT TV IS++D NDN+P  +   + F+I E+ P    +G +T TD D G NG V+  +       S      S      +   S+ D E     ++ +  SD G P+ S +  + + + DV+DN  +F K  F+  + E   + + + +++  DKD  S  ++   L+ +    F  +D  TG V S    D ET   Y++ VT R+  SP+K+ +A + I I+++NDN P F       S+ E   IN  + K+NA D D    GT +            F +DQ  G I + +RLD E    + L++ AT+ G     S      + V+D NDN P F
Sbjct:  508 GPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELDRETTPS------------------YSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGPYVFRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDNTD-----VFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEITTRVPLDRETIASYS--LTINADDGSLVR--FMAAT-TVNISIADENDNQP-TFTGPSRFNISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSG----ILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDNFT-ID-STGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAINTHVVKLNATDSD----GTPLTFDIVEGNAGSSFKIDQSSGLISVAKRLDRETTANYTLVVRATETGS-QGESVYNNATIRVLDVNDNAPVF 1099

HSP 7 Score: 117.087 bits (292), Expect = 1.245e-26
Identity = 136/456 (29.82%), Postives = 222/456 (48.68%), Query Frame = 3

Query:  840 YSI-EGPGQDLFLIEGP-GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRL-YSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITM 2189
            YSI +G  Q +F I+   G I   G   +++  E    LTV   D   + +        V I V D NDN P   + + +F+I EN P   +  +T TD DSG N  ++  +   E+K       M ++   +I T +  DHE     +++I   D    K ++ V L + + DV+DN   F    + TGV E   +G+ + ++ AVD D    + L Y L    D ++  +D Q GV+R+   FDRETK  Y++ +  ++  SP+++  A + I+ILD+NDN P F    Y+ SV E   I   +  V A D D  NN  + Y+    +     F +D + G + + + LD+E +  + L +  TDRG P   + T+ ++++V D NDNPP F    ++  +  +T   ++  +  TD D+ T N  + F +          +F ID  TG I++
Sbjct:    1 YSIMDGNDQGMFTIDSSTGSITTTG-RKFDRESESRYRLTVLAQD---AANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQVAIVTATDRDSGTNAAITYSLFSGENKF------MMNSKTGEIRTVTPLDHETKDSYTMRISAFDG---KHTTFVPL-ITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLV-SGDTSYFTVDSQ-GVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNT-NHAFTLDAVTGVVTVSRSLDFEQRSSYALGLSVTDRGSP-PLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGTQ--VSATDRDSST-NGALVFGIIKGNDD---GVFTIDGSTGIISI 432

HSP 8 Score: 113.235 bits (282), Expect = 2.138e-25
Identity = 176/663 (26.55%), Postives = 299/663 (45.10%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLIEGPGIIRLLGVLDYEK-LEEKTI---FLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPR-MYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYD-IFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSV----SERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEIT----MDIDQQKTLTCEKLPKLIELKIRVFD---PTFTEFKDHCV 2297
            I + + D NDN P+  Q+   LT+ E+   G  +    A D D+  + +  Y +        F+   ID+   ++ ++  +D E   S+   + A +   P    TA V +TV D+ND+ PI+        I E     +++  ++ATD D   N  + YSI       F I       + GVL  +K +  +T+    LT++ +D G   S + ++   +T+ V+DVNDN P    ++ I S+ EN  +   +  +   D+D G N  +   +    D     E +   N+    I T++  D E  S+  +++  +D+   K ++   + +R+ +++D    F ++ +   V E     T + K+ A D+DS  SL Y +   KD     +D+++G++ +  V DRE    Y I V V +  +P  ++   + IKILD NDN PKFD     S     S     +F   K+ A D D   N  + Y   R D +         G I L Q LD E +  + L I A D G P  ++S+ T+ V+VID ND+ P   S      +    +     ++ +  +D DT  N ++ F+L     +    +F +DN TG+I+    +D +QQ   T         L+I V D   P+ +   D  +
Sbjct: 1189 ITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFR---IDSTTGRITVVGVVDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFAINA-----MNGVLTVKKEINRETVPTYTLTIRASDRG---SPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGND-----EKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDS---KYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDSFGSLSYSIVGGKDSDKFSIDQRSGIISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFSF---KLAATDADEGTNARITYNLSRNDAFMIGA---SSGVITLAQPLDRENKSTYDLAIQARDHGTP-PQASSITIRVTVIDINDHRPLINSSSLRGSV-RENQPKETHVMRILASDADTGLNAELTFSL---LSNEHKSVFTLDNTTGDISTKVPLDREQQAVYT---------LRIGVADKGNPSLSSVADVII 1812

HSP 9 Score: 98.9821 bits (245), Expect = 5.909e-21
Identity = 153/583 (26.24%), Postives = 260/583 (44.60%), Query Frame = 3

Query:   84 FEEEESSVN-DKGIRFNDIINV-------DGPRNKYHYSIV-PESSVVSINQ-EGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSV--YDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSI-EGPGQDLFLI-EGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNG---LSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDEN-VPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRL-YSFSVSERKEINFQIGKVNAEDPD 1769
            F   E+S   D+G+     + V       +G   +  YSIV  ++S  +IN   G++  K+  +RE +   T                  ++I+ +          K++ + V D NDN P   +  ++  +          L  A D DS + + +V  Y +    D K+FK   I++    +   + LD E  + +  ++ A + K      VT+ VI+ ND  P +T  ++  ++ EN+P++T ++++SA+D DS +  L YSI  G   D F I +  GII    VLD E +    I   V+VTD G   LS  T       VTI + D NDN P     +   SI EN  P  +   +  TDAD G N  ++         +S +++ M   +   I  +   D E  S   + I   D+G P  +SS+ + + + D++D+            V E +   T + +I A D D+   + L + L   +  +   LD  TG + +    DRE +  Y + + V +K +P+ +  A ++I ++D +DN P+F    Y+ ++SE       I +V A D D
Sbjct: 1308 FASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFAINAMNGVLTVKKEINRETVPTYT------------------LTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAAD-DSDVGANAVLRYSIISGNDEKRFK---INSTSGVIMTTTPLDFEEKSQYGLEVTATDSKYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDS-FGSLSYSIVGGKDSDKFSIDQRSGIISTADVLDRELVSLYAI--QVRVTDAGNPPLSNLTW------VTIKILDENDNSPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITY-------NLSRNDAFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVMRILASDADTGLNAELTFSLLSNEHKSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRFQPTEYNVTISESLPRGASIVQVTARDID 1852

[Close]

BLAST of Protocadherin 1 vs. Ensembl Nematostella
Match: EDO33360 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSF3])

HSP 1 Score: 131.339 bits (329), Expect = 2.042e-32
Identity = 133/478 (27.82%), Postives = 223/478 (46.65%), Query Frame = 3

Query:  384 ICVRDKNDNCPKLQNPIH-LTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCK----------LEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGP--GQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDV--SCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVE--LFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD---STSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSP--NKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQI 1742
            I + D NDN PK   P + + + E  +    +   +A D DS +++K VY +     +  F    +D     L     LD ET T +T            L A +P      V+         + P++    + V+IPEN      I+ L+A D D   N  +RY ++     +   + +  G I +   +DYE  E  +    V  +D G ++ T    + +V I++ DVNDNRP+         + ENV     +  +T +D DS +NG V  S L    + K S+ ++         + T+ S D+E  +  ++ I  +D G P L+SS    L + + +++DN+  F +K ++  +DE   +G  + +++A D+D   S+S L Y + +        +D  TGV+R++Q  DRET  EY + +TV +   P  N   +A + I +LD NDN P FD+ +YS S+ E   +   I
Sbjct:    1 ISILDINDNRPKFPQPYNKIEITEGTRESTMILTLQATDADSGMNAKLVYSILNTTSNGTFT---VDPHTGVLRTSQRLDRETVTEYTLTITVHDSGDPMLNAAQPAIVSITVLDEND-----NVPVFDQEVYSVSIPENITVGAHILLLNARDKDEGVNAEIRYFLKDAIVSKRFSMNDTTGQITIKQAVDYE--ERSSYSFEVFASDGGEARLT---GSSSVRITIIDVNDNRPYFLPTRYYVQLVENVAIGTTVTQLTASDLDSSLNGKVLFSILEGNSDGKFSIDQNTGV------VTTNKSLDYEDVTEYTLVIQATDCGDPPLNSSQPGMLHVSVVNINDNSPVFSQKIYSASIDENTTVGHVILRVQATDRDHVNSSSILVYSILNTTSNGTFTVDPHTGVLRTSQRLDRETVTEYTLTITVHDSGDPMLNAAQTATVSITVLDENDNVPVFDQEVYSVSIPENITVGAHI 459

HSP 2 Score: 113.235 bits (282), Expect = 1.915e-26
Identity = 134/450 (29.78%), Postives = 211/450 (46.89%), Query Frame = 3

Query:  750 QVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLIEGP--GIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSAT-GTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSN-TIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSS---LEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSP--NKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXX-XXXDENDNPPKFKSRYFEIDI------GCH 2039
            ++ I E T  +T I+ L ATD+DS  N  L YSI     +      P  G++R    LD E + E T  LT+ V D+G     + +A    V+I+V D NDN P    +    SI EN+    ++  +   D D G+N ++   +     K ++   + S N T   I    + D+E  S  S ++  SD G+ +L+ S  + + I DV+DN   F+   +   + E   IGT + ++ A D DS+ +   L   L    D  F  +D+ TGVV +N+  D E   EY + +   +   P  N +   +L + +++INDN P F  ++YS S+ E   +   I +V A D D  N+ +++            F VD   G +R  QRLD E    + L I   D G P+  ++ T  +  +V+DENDN P F    + + I      G H
Sbjct:   19 KIEITEGTRESTMILTLQATDADSGMNAKLVYSILNTTSNGTFTVDPHTGVLRTSQRLDRETVTEYT--LTITVHDSG--DPMLNAAQPAIVSITVLDENDNVPVFDQEVYSVSIPENITVGAHILLLNARDKDEGVNAEIRYFL-----KDAIVSKRFSMNDTTGQITIKQAVDYEERSSYSFEVFASDGGEARLTGSSSVRITIIDVNDNRPYFLPTRYYVQLVENVAIGTTVTQLTASDLDSSLNGKVLFSILEGNSDGKF-SIDQNTGVVTTNKSLDYEDVTEYTLVIQATDCGDPPLNSSQPGMLHVSVVNINDNSPVFSQKIYSASIDENTTVGHVILRVQATDRDHVNSSSILVYSILNTTSNGTFTVDPHTGVLRTSQRLDRETVTEYTLTITVHDSGDPMLNAAQTATVSITVLDENDNVPVFDQEVYSVSIPENITVGAH 458

HSP 3 Score: 79.7221 bits (195), Expect = 1.400e-15
Identity = 101/398 (25.38%), Postives = 188/398 (47.24%), Query Frame = 3

Query:  294 KEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNPIH-LTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN--VLRYSIEGPGQDLFLI-EGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMY-LGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDI-------FTSSSFDHEVSSRVSVKIVCSDNGQPKLSSS--VELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFL 1436
            +E V +    I++ ++     N  +   + I V D+NDN P     ++ +++ E+  +G  + L  A D D  ++++  Y LK    SK+F +   ++   Q+ +  ++D+E  +S++ ++   +  E +   ++ V +T+ID ND+ P +    + V + EN    T + QL+A+D DS+ N  VL   +EG     F I +  G++     LDYE + E T  L ++ TD G       S  G + +SV ++NDN P    K    SIDEN    + +  +  TD D  +N   S ++ Y       S    +SN  + +        TS   D E  +  ++ I   D+G P L+++    + + + D +DN   F ++ ++  + E   +G  +
Sbjct:   78 RETVTEYTLTITVHDSGDPMLNAAQPAIVSITVLDENDNVPVFDQEVYSVSIPENITVGAHILLLNARDKDEGVNAEIRYFLKDAIVSKRFSM---NDTTGQITIKQAVDYEERSSYSFEVFASDGGEARLTGSSSVRITIIDVNDNRPYFLPTRYYVQLVENVAIGTTVTQLTASDLDSSLNGKVLFSILEGNSDGKFSIDQNTGVVTTNKSLDYEDVTEYT--LVIQATDCG-DPPLNSSQPGMLHVSVVNINDNSPVFSQKIYSASIDENTTVGHVILRVQATDRDH-VNS--SSILVY-------SILNTTSNGTFTVDPHTGVLRTSQRLDRETVTEYTLTITVHDSGDPMLNAAQTATVSITVLDENDNVPVFDQEVYSVSIPENITVGAHI 459

[Close]

BLAST of Protocadherin 1 vs. Ensembl Nematostella
Match: EDO35412 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK9])

HSP 1 Score: 129.413 bits (324), Expect = 1.977e-30
Identity = 159/584 (27.23%), Postives = 268/584 (45.89%), Query Frame = 3

Query:  324 ISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNPIH-LTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKL-TMIDNKFPQLELISS--LDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPG---QDLF-LIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYI-------KNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFV--DQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF 2003
            IS+Q  ++  SN P   Q++  V D NDN P+     + L + ES  +    P+  A D D+  +    Y +    ++  F L T        L +I+   LD ETT  +   + A +   P      ++ +T++D+NDH P++T  S+  +I ENT     I+++SA D DS  N  ++Y+I+        +F L    G+IR    LD+E     T    V  +D G+     K+   TVTI+V D NDN P + I        +     + ++    +  + VTD DS  N      +   +D+      K+     Y I      D E+    ++ +  +D G P  S+   + + + DV+DN+  F    +   + E  + G+++ ++ A D D     ++ Y +T   DL + ++D Q+G+V + +  DRE      I +T ++  S  KT S  + + I+D NDN P+F +  Y  ++SE   I   + +V+A D D  +NG + Y     D      F    Q G +    +LD E + L+   ++A D G P    S+  V +++ D NDN P F
Sbjct:   65 ISLQLRTLNPSNQPISVQVQ--VDDINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDFEVKNSYT--FNVIASDGGVPS---KNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGCF---KVEFLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDP-QLMSSVKVELTISDINDNAPVF 637

HSP 2 Score: 92.4337 bits (228), Expect = 4.791e-19
Identity = 164/619 (26.49%), Postives = 262/619 (42.33%), Query Frame = 3

Query:  363 PKRKQIE---ICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEA----CEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSI---EGPGQDLF-LIEGPGIIRLLGVLDYEKLEEKTIF-LTVKVTDNGLSQ--STIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKV----NAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDT-KNRQMQFNLQMVTPSYLMKLF 2156
            P R  +    I V D NDN P    N     + E A+ G  +    A D D   +    Y +    D   F+   +D +   +     LD E  +S T  + A      PK   T V    +  +++ P      S++ TI E       ++Q+SATD DS  N  + Y I   +     LF L    G++     LD E    K+++  TV   D+G  Q  S++K     V +++SD+NDN P  Y      SI EN P   L  +T TDAD G N  +S  +    +  + S   + S+T   I T +S DHEV    S+ I   D G    + +  + + + +  DN   F+ + +   V E    GT + ++ A  KD   S+ Y +          +D   G+++ N   DRE K +Y + V  R       +  A + I++LD NDN P+F    + SV    +  + +G+V     A D D   NG V Y Q   +     +     G I+L ++L    +  + + ++A+D G P   S+ T  I   I+    PPKF    +   +   ++ +S     V   D D+ KN Q+ +++       L  +F
Sbjct:  403 PSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQ---VDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKS-SYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRET---KSLYSFTVLAKDHGDPQLMSSVK-----VELTISDINDNAPVFYPVEYFASIMENEPPGKLLQVTATDADEGTNAVISYDIIGGNNNGNFS---IDSSTGV-ISTLASLDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDKNGSISYAIVSGDPTNLFLVDSTGGIIKINGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFS---TSSVIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRY-QLTSNAEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSPPQHSTMTIHITLSINH---PPKFTLSSYVTHV-LASQPLSYQFFYVVAVDQDSGKNGQLFYSIPQGNEEGLFGIF 997

HSP 3 Score: 87.0409 bits (214), Expect = 2.257e-17
Identity = 120/428 (28.04%), Postives = 192/428 (44.86%), Query Frame = 3

Query: 1008 TVTISVSDVNDNRP----FIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDK--ISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEY-YLTDKKDL---AFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLY-------SFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLG--KIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDL-IPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEIT----MDIDQQKTLTC 2219
            +V + V D+NDN P      Y      S+D N         T TD D+G NG V   +A  ++    SL  +   + +   + T    D E +    + I  +D G P L     + + I D +D+   F +  +   + E  + G  + ++ A D+DS S+ +  Y  D   +   +  +LD  TGV+R+ Q  D E K+ Y  NV   +   P+K D A + I +LD NDN P+    Y           SE   IN  I  +   D D   N          D+ +  F V+ LG   I+L + LD E+ P ++L +  TD+G P SRS+   V++ V D NDN P F S  +  +I    +  S  L +  TD D +  N  + ++   +T    +  F++D Q+G +T    +D +Q  ++T 
Sbjct:   80 SVQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPI---NTATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDD-EGCFKVEFLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVP-SRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPD-EGDNGTVSYS---ITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTI 498

HSP 4 Score: 70.8626 bits (172), Expect = 2.168e-12
Identity = 139/628 (22.13%), Postives = 269/628 (42.83%), Query Frame = 3

Query:  207 NQEGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFG----ISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNPIHLT-MIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFP--QLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQL--SATDSDSTYNVLRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIF-LTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDE-NVPRMYLGDMTVTDADSGINGDV--SCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFP---FFVDQLG-KIRLFQRLDYEIQPLH----HLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKS 2009
             + G++R++  ++ E L  +   S          K+  G     ++Q  +    +PP+   + I +    ++ PK     ++T ++ S  + ++     AVD DS  + +  Y +    +   F +      FP  +L +  SL      S+   + A +   P    +  VT+ + D NDH  ++   +++  + EN+   T +  L   A D   T +++ YS+        +    G I     LD E+L + T   + +   +   + +TIK     V ++V+D+NDN P         ++ E ++P   +  +   DAD G N     S +     DK  ++ S        ++  S + D E +S  ++ +  +D     L S+ ++ + + D +D    F +  +   + E   IG+ +  + A DKD      ++Y +++    A  +++  TG +   +  D ET   Y++ +T ++      + +  + + +LD+NDN P F  +  + +V E     F +G+  A D D   N  + ++       Q P   F V+    +I     +D E  P       L+++ATD+G P   S+  ++ V V DENDN P F S
Sbjct:  874 GKNGLVRYQLTSNAEGLLWINSTSGVIKLAR---KLTDGDETQYTVQVLASDSGSPPQHSTMTIHITLSINHPPKFTLSSYVTHVLASQPLSYQFFYVVAVDQDSGKNGQLFYSIPQGNEEGLFGI------FPGGKLYIRKSLLQALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIV-YSLISSESHFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFINSSTG------ELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYS----QTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSP-KLSTRKSITVQVTDENDNSPGFVS 1480

HSP 5 Score: 66.2402 bits (160), Expect = 5.775e-11
Identity = 98/418 (23.44%), Postives = 183/418 (43.78%), Query Frame = 3

Query:  720 HPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYS-IEGPGQDLFLI-EGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTV----TDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSS--LEYYLTDKKDLAFVELDRQTGVVRSNQVFDRET----KDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            + P+++   + +T+ E +   + + ++ A D+D   N    YS + G G D F I    G + L   LD E        L VK TD   S + + S T  + I+V D ND RP     +   +I E+     +G + +    +D D G NG    L+ Y     +L+      +    +  + S D E +    + I   D+G   LSS+V + + + DV+DN   F  +     V E    G  + +  A D+D+ ++  + + +  +       ++  T  + +    D ET    +D +++ V   ++ SP  +    + +++ D NDN P F  +   + +    +N  +  + AEDPD  +NG V Y+    +   F       G++++  ++  +   ++ L I A+D G P
Sbjct: 1155 NAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFINSSTGELHLSKTLDRETTSSYN--LVVKATD--ASNANLYS-TAKIEITVGDSNDQRPVFPESDYTVNITEDA---LIGSLVINLNASDKDIGQNG----LIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGF--VSPPAAAAGSSLN--VMTITAEDPDRNSNGKVTYSIISGNNGYFNLH-PSTGQLQMIHQIP-DNPTIYQLTIQASDGGQP 1554

HSP 6 Score: 50.0618 bits (118), Expect = 5.140e-6
Identity = 104/433 (24.02%), Postives = 177/433 (40.88%), Query Frame = 3

Query:  318 FGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKC---CXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSI--EGPGQDLFLIEGPGIIRLLGVLDYEKLEEK--TIFLTVKVTDNGLSQ-STIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVT--DADSGINGDVS-CLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDST--SSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRE 1571
            + + ++      +N     +IEI V D ND  P   ++   + + E A IG  +    A D D   +    Y +     +  F    +++   +L +  SLD ETT  +   + A +        T  VTV V+D ND+ P++      +T+ EN  +   + + +A+D D+  N  + +S+  + P +   +      I  +  +D E +     +  L V  TD G  + ST KS    +T+ V+D NDN P         S         L  MT+T  D D   NG V+  +++      +L  S      I+ I  + +          + I  SD GQP   +   + +  +        F    +   V E K  GT +  + A    S+   ++EYYLT        E+ + TGVV++ +  DRE
Sbjct: 1230 YNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFD---VESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKS----ITVQVTDENDNSP------GFVSPPAAAAGSSLNVMTITAEDPDRNSNGKVTYSIISGNNGYFNLHPSTGQLQMIHQIPDNPTI-------YQLTIQASDGGQPSRQTQTVVSVFKEGPIGGGPTFSSADYQGSVTENKVAGTSVVTVLAAYPQSSLNGNIEYYLTSDSSKGGFEVVKSTGVVKTTRGIDRE 1642

[Close]

BLAST of Protocadherin 1 vs. Ensembl Nematostella
Match: EDO34815 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SN97])

HSP 1 Score: 125.946 bits (315), Expect = 1.520e-29
Identity = 150/563 (26.64%), Postives = 242/563 (42.98%), Query Frame = 3

Query:  726 PIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSI-EGPGQDLFL----IEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDEN----VPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLT-DKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVT-VREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFV--DQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEIT----MDIDQQKTLTCEKLPKLIELKIRVFDPTFTEFKDHCVLKLKLSQFYIKTPSNDHQIQ 2357
            P++   ++  T+ EN+P  T ++ ++ATD+DS  N  + YS+  G    LF     +   G I + G LD E  +     LT+  TD G+  S  ++A     + + D NDN P         SI EN    VP      +  TD D   N DV   +    D I  + +  +      +    S DHE ++  +  ++ +D       S  E+ + + D +DN  +FI     + + E   IG  +A++ A D DS  +   + + +       E+ R  GVVR +   DRE K  Y +NV+ +   +SP +     + + + D+NDN PKF +  ++  VSE   +   I    A DPD  +N  + Y+        +P F      G + + + LD E +  +   + A D G      S   V V + DENDN P+F +  ++ D+   T V    ++ V   D D  N         VT + L+  F I   TG I     +D +QQ   T         L + V D   T+F    +L + ++ F      ND+Q Q
Sbjct:  112 PVFNPTNYSTTVFENSPVGTSLLDVTATDADSGQNAYVTYSVTAGDSHGLFRAVTKVSNHGTIEVAGNLDREVNDFYN--LTITATDGGVPIS--RTAIAIALVRILDRNDNVPKFSHARYTGSIQENSGPGVPVQMASSIMATDRDIESNADVRYRLN-GSDSIQFAVNPRTGVITTRVSPPPSLDHERTTNYTFHVIAADQAGTGHESLAEVVIHVLDANDNTPRFIPSSIQSTISEAASIGQSVARVTANDPDSGLNGRIFFSINSGSEGKFEIGRSDGVVRVSGSLDREAKAVYVLNVSAIDGSYSP-REGYGTVTVTLQDVNDNTPKFTKPAFNVDVSEGVAVGSVIVNATATDPDQGSNAAITYSM------SYPGFAINSNTGSVTITRPLDRETKQAYSFTVHARDGG---GLESNVAVNVEIGDENDNSPQFPTVQYQTDVIDRTPV-GTIVLAVNAEDRDVGNN------GHVTYAILILPFIIVPDTGNINTSSKLDREQQSLYTLVHY----VLNLSVTDHGVTQFTSFALLNISVTDF------NDNQPQ 642

HSP 2 Score: 118.627 bits (296), Expect = 2.754e-27
Identity = 180/640 (28.12%), Postives = 292/640 (45.62%), Query Frame = 3

Query:  360 PPKRKQIEIC---VRDKNDNCPKLQNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN-KF---PQLELIS-------SLDHETTTSHTCKLEACEPKCCXXXXXXXXXXX---XXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLI-EGPGIIRLLGVLDYEKLEEKTIF-LTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRP-FIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKD--STSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKD-----EYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRL-YSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVD-QLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDT-KNRQMQFNLQMVTPSYLMKLFRIDNQTGEI 2183
            P  R  I I    + D+NDN PK  +  +   I+    G  +P+Q A    S + +    D++ NAD  +++L   D+ +F   P+  +I+       SLDHE TT++T  + A +        +   VI     ND+ P +   S Q TI E       + +++A D DS  N  + +SI    +  F I    G++R+ G LD E    K ++ L V   D   S    +   GTVT+++ DVNDN P F     N+  + E V     + + T TD D G N  ++  ++YP   I+   S   S TI     +   D E     S  +   D G   L S+V + + I D +DN+ +F    + T V +   +GT +  + A D+D  +   + Y +     L F+ +   TG + ++   DRE +       Y +N++V +      T  A+L I + D NDN P+F++  YS +V E   +  ++  V A D D   N  ++Y+    D     F ++   G+IRL + ++ E +  +H+ I A+DRG P   SS   V V V+D NDNPP F SR +E  +          ++ V   D D  +N  + + +        + +F I+  TG I
Sbjct:  200 PISRTAIAIALVRILDRNDNVPKFSHARYTGSIQENS-GPGVPVQMA----SSIMATD-RDIESNAD-VRYRLNGSDSIQFAVNPRTGVITTRVSPPPSLDHERTTNYTFHVIAADQAGTGHESLAEVVIHVLDANDNTPRFIPSSIQSTISEAASIGQSVARVTANDPDSGLNGRIFFSINSGSEGKFEIGRSDGVVRVSGSLDREA---KAVYVLNVSAIDGSYSP---REGYGTVTVTLQDVNDNTPKFTKPAFNV-DVSEGVAVGSVIVNATATDPDQGSNAAITYSMSYPGFAIN---SNTGSVTI-----TRPLDRETKQAYSFTVHARDGG--GLESNVAVNVEIGDENDNSPQFPTVQYQTDVIDRTPVGTIVLAVNAEDRDVGNNGHVTYAILI---LPFI-IVPDTGNINTSSKLDREQQSLYTLVHYVLNLSVTDHGVTQFTSFALLNISVTDFNDNQPQFNQSEYSATVLENMPVGTKVTMVTARDEDSGINSQIMYSLTGGDGV---FSIEPSTGQIRLQKAINREAKENYHVTITASDRGTP-VLSSDAKVHVHVLDVNDNPPVFTSRVYERTMSEGNAAAGEFVVQVNATDADVERNGHVTYTIMH----GALGMFTINETTGVI 803

HSP 3 Score: 102.834 bits (255), Expect = 2.033e-22
Identity = 142/513 (27.68%), Postives = 229/513 (44.64%), Query Frame = 3

Query:  726 PIWTVLSWQVTIPENTPS-NTQIMQLSATDSDST------YNVLRYSIEGP--GQDLFLIEGPGIIRLLGVLDYEKLEEKTIF---LTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVS-CLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFL-RIKDVDDNNVKFIKKFFATGVDEGKEIGT---FLAKIEAVDKD--STSSLEYYLTDKKDLAFVELDRQTGVVRSN----QVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKF-DRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITM 2189
            P++T  S+  T  E + +    I  + ATDSD        Y+++  ++  P    D  L    G+I+         LE +  F   LT+   D+GL      SAT  V+I V D+NDN P     N   ++ EN P    L D+T TDADSG N  V+  + A     +  + +K+S++   ++  + + D EV+   ++ I  +D G P   +++ + L RI D +DN  KF    +   + E    G      + I A D+D  S + + Y L     + F  ++ +TGV+ +        D E    Y  +V   ++        A ++I +LD NDN P+F       ++SE   I   + +V A DPD   NG + ++     E +F       G +R+   LD E + ++ L + A D G    R    TV V++ D NDN PKF    F +D+     V S  ++  T  D D      Q +   +T S     F I++ TG +T+
Sbjct:    1 PVFTPASYNATFTEGSSTRGVLIATVKATDSDDGANGDVDYSIVDGNVGDPRSNSDFTLDPNTGMIKTA-----RNLERQQTFSYNLTIGAADHGLPS---FSATTRVSIVVGDLNDNNPVFNPTNYSTTVFENSPVGTSLLDVTATDADSGQNAYVTYSVTAGDSHGLFRAVTKVSNHGTIEV--AGNLDREVNDFYNLTITATDGGVPISRTAIAIALVRILDRNDNVPKFSHARYTGSIQENSGPGVPVQMASSIMATDRDIESNADVRYRLNGSDSIQFA-VNPRTGVITTRVSPPPSLDHERTTNYTFHVIAADQAGTGHESLAEVVIHVLDANDNTPRFIPSSIQSTISEAASIGQSVARVTANDPDSGLNGRIFFSINSGSEGKFEIGRSD-GVVRVSGSLDREAKAVYVLNVSAID-GSYSPREGYGTVTVTLQDVNDNTPKFTKPAFNVDVSEGVAVGSV-IVNATATDPD------QGSNAAITYSMSYPGFAINSNTGSVTI 493

HSP 4 Score: 94.3597 bits (233), Expect = 8.570e-20
Identity = 112/485 (23.09%), Postives = 201/485 (41.44%), Query Frame = 3

Query:  213 EGIIRFKRGTDRE----WLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXXXXX-HPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDS------TYNVLRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIF---LTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEG-KEIGTFLAKIEAVDKDSTSSLEY-YLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREK 1613
            +G++R     DRE    ++  ++ +  S   +E      +G                  + + ++D NDN PK   P  ++ + E   +G  +    A D D   ++   Y       S  +    I++    + +   LD ET  +++  + A +    ++ V     I D + + P +  + +Q  + + TP  T ++ ++A D D       TY +L            ++   G I     LD E+    T+    L + VTD+G++Q T   +   + ISV+D NDN+P         ++ EN+P    +  +T  D DSGIN  +   +   +   S+  S         I    + + E      V I  SD G P LSS  ++ + + DV+DN   F  + +   + EG    G F+ ++ A D D   +    Y      L    ++  TGV+R+  V +RE+KD Y + V  R++
Sbjct:  387 DGVVRVSGSLDREAKAVYVLNVSAIDGSYSPREG-----YG-----------------TVTVTLQDVNDNTPKFTKPAFNVDVSEGVAVGSVIVNATATDPDQGSNAAITY-------SMSYPGFAINSNTGSVTITRPLDRETKQAYSFTVHARDGGGLESNVAVNVEIGDENDNSPQFPTVQYQTDVIDRTPVGTIVLAVNAEDRDVGNNGHVTYAILILP-------FIIVPDTGNINTSSKLDREQQSLYTLVHYVLNLSVTDHGVTQFT---SFALLNISVTDFNDNQPQFNQSEYSATVLENMPVGTKVTMVTARDEDSGINSQIMYSLTGGDGVFSIEPSTGQ------IRLQKAINREAKENYHVTITASDRGTPVLSSDAKVHVHVLDVNDNPPVFTSRVYERTMSEGNAAAGEFVVQVNATDADVERNGHVTYTIMHGALGMFTINETTGVIRTQGVLNRESKDFYTLIVMARDQ 826

HSP 5 Score: 60.8474 bits (146), Expect = 1.895e-9
Identity = 67/232 (28.88%), Postives = 115/232 (49.57%), Query Frame = 3

Query:  378 IEICVRDKNDNCPKL-QNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPE-NTPSNTQIMQLSATDSDSTYNV-LRYSIEGPGQDLFLI-EGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPF 1052
            + I V D NDN P+  Q+    T++E+  +G K+ +  A D DS ++S+ +Y L          +  I+    Q+ L  +++ E   ++   + A +   P     A V V V+D ND+PP++T   ++ T+ E N  +   ++Q++ATD+D   N  + Y+I      +F I E  G+IR  GVL+ E  +  T+ +  +  D G   +      GT+ + V D NDN P 
Sbjct:  629 LNISVTDFNDNQPQFNQSEYSATVLENMPVGTKVTMVTARDEDSGINSQIMYSLTGGD-----GVFSIEPSTGQIRLQKAINREAKENYHVTITASDRGTPVLSSDAKVHVHVLDVNDNPPVFTSRVYERTMSEGNAAAGEFVVQVNATDADVERNGHVTYTIMHGALGMFTINETTGVIRTQGVLNRESKDFYTLIVMAR--DQG---AVPYMDFGTIDVHVIDKNDNTPI 850

[Close]

BLAST of Protocadherin 1 vs. Ensembl Medaka
Match: pcdh9 (protocadherin 9 [Source:NCBI gene;Acc:101156238])

HSP 1 Score: 161.77 bits (408), Expect = 2.671e-40
Identity = 197/678 (29.06%), Postives = 320/678 (47.20%), Query Frame = 3

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-----VLRYSIEGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFI-------YIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF-----KSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            DRE LC           ++A C     + +  N   +       +I+I V+D NDN P   +P I++++ E+  I  +  +  A D D+  +S   Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN+P  T ++QL ATD+D   N     V    +    + LF +    G+I +   LD E  E     L+V  +D   S      A  TV I+V+DVNDN P I        I   +F  +++     +  +TV+D D+ ING V C +   E  +      +  N  Y + TS+  D+E +   + KIV SD+G+P L+ +  + +R++D +DN   F +      V E  +   FL  + A D+DS  + E       + +F +LDR+TGV+ +++VFDRE +D +   VT R+  +P     A +++ +LD NDN+PKF    + F VSE       +G +   D D   N  +  +    +E    F +D   G I+     D E Q  +   + A D G P   SS   V ++VID NDN P        + +  + +      +  ++  V D+DT   N ++++    +       LFRID  TG IT++
Sbjct:   93 DREKLCP------GSSFEDAECSFEIEVVVLPNDYFR-----LIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL-INGQSA-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNKPVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQVSPATKRLFALNSTSGLITVQRPLDRE--ETAIHKLSVLASDGSSS-----PARATVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFI---EKDVPFHLKAVYDNQ-YLLETSALLDYEGTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFTVTARDNGTPPLQAQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDAGENAAISLSILNDNEN---FILDPFSGVIKSNVSFDREQQSSYTFDVRAIDSGRP-PCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAV-DSDTGM-NAELKY---TIVSGNNKGLFRIDPVTGNITLE 737

[Close]

BLAST of Protocadherin 1 vs. Ensembl Medaka
Match: pcdh9 (protocadherin 9 [Source:NCBI gene;Acc:101156238])

HSP 1 Score: 162.155 bits (409), Expect = 2.730e-40
Identity = 197/676 (29.14%), Postives = 319/676 (47.19%), Query Frame = 3

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-----VLRYSIEGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFI-------YIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPP--KFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            DRE LC  +        ++A C     + +  N   +       +I+I V+D NDN P   +P I++++ E+  I  +  +  A D D+  +S   Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN+P  T ++QL ATD+D   N     V    +    + LF +    G+I +   LD E  E     L+V  +D   S      A  TV I+V+DVNDN P I        I   +F  +++     +  +TV+D D+ ING V C +   E  +      +  N  Y + TS+  D+E +   + KIV SD+G+P L+ +  + +R++D +DN   F +      V E  +   FL  + A D+DS  + E       + +F +LDR+TGV+ +++VFDRE +D +   VT R+  +P     A +++ +LD NDN+PKF    + F VSE       +G +   D D   N  +  +    +E    F +D   G I+     D E Q  +   + A D G P   SS   V ++VID NDN P   +        +   + +    +  V   D+DT  N ++++    +       LFRID  TG IT++
Sbjct:   93 DREKLCPGSSF------EDAECSFEIEVVVLPNDYFR-----LIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL-INGQSA-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNKPVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQVSPATKRLFALNSTSGLITVQRPLDRE--ETAIHKLSVLASDGSSS-----PARATVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFI---EKDVPFHLKAVYDNQ-YLLETSALLDYEGTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFTVTARDNGTPPLQAQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDAGENAAISLSILNDNEN---FILDPFSGVIKSNVSFDREQQSSYTFDVRAIDSGRP-PCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDSDTGMNAELKY---TIVSGNNKGLFRIDPVTGNITLE 737

[Close]

BLAST of Protocadherin 1 vs. Ensembl Medaka
Match: pcdh9 (protocadherin 9 [Source:NCBI gene;Acc:101156238])

HSP 1 Score: 161.77 bits (408), Expect = 4.213e-40
Identity = 197/676 (29.14%), Postives = 319/676 (47.19%), Query Frame = 3

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNP-IHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDN----KFPQLELISSLDHETTTSHTCKL---EACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYN-----VLRYSIEGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFI-------YIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDR-LYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPP--KFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTK-NRQMQFNLQMVTPSYLMKLFRIDNQTGEITMD 2192
            DRE LC  +        ++A C     + +  N   +       +I+I V+D NDN P   +P I++++ E+  I  +  +  A D D+  +S   Y+L  N  S  F L +++     K+PQL +  +LD E   ++  K+   +   P+   TA++ VTV D ND+ P++     +V IPEN+P  T ++QL ATD+D   N     V    +    + LF +    G+I +   LD E  E     L+V  +D   S      A  TV I+V+DVNDN P I        I   +F  +++     +  +TV+D D+ ING V C +   E  +      +  N  Y + TS+  D+E +   + KIV SD+G+P L+ +  + +R++D +DN   F +      V E  +   FL  + A D+DS  + E       + +F +LDR+TGV+ +++VFDRE +D +   VT R+  +P     A +++ +LD NDN+PKF    + F VSE       +G +   D D   N  +  +    +E    F +D   G I+     D E Q  +   + A D G P   SS   V ++VID NDN P   +        +   + +    +  V   D+DT  N ++++    +       LFRID  TG IT++
Sbjct:   93 DREKLCPGSSF------EDAECSFEIEVVVLPNDYFR-----LIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL-INGQSA-FGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNKPVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQVSPATKRLFALNSTSGLITVQRPLDRE--ETAIHKLSVLASDGSSS-----PARATVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFI---EKDVPFHLKAVYDNQ-YLLETSALLDYEGTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFTVTARDNGTPPLQAQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDAGENAAISLSILNDNEN---FILDPFSGVIKSNVSFDREQQSSYTFDVRAIDSGRP-PCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDSDTGMNAELKY---TIVSGNNKGLFRIDPVTGNITLE 737

[Close]

BLAST of Protocadherin 1 vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079])

HSP 1 Score: 153.68 bits (387), Expect = 8.753e-38
Identity = 213/707 (30.13%), Postives = 333/707 (47.10%), Query Frame = 3

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQ-NPIHLTMIESAKIG--FKLPLQEAVDNDSPLHSKSVYDLKCNADSKK-FKLTMIDN---KFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIE---GPGQDLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKN--------NIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVA--YPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYY---LTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPP---KFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLPKLIELKIRVFD 2264
            DRE L     L      K   C + F +S+ +  ++++  P+  +  I V+D NDN P+   + + +++ E+  +G  F +PL  A D DS  +  + Y L    D+   F L + D+   K PQL ++ +LD E   S+   ++A +   P+    A++ V V D ND+ P +   S++  + EN+P    ++Q+ A DSD   N  + YS+     P   L  I+   GII + G LD E++   + ++  +  D G      KS+   VTI V+D NDN P + I+          I +I E++P    +  + V+D D G N  V+C+VA   P      S+S   +   Y + T++  D+E      V+IV  D+G P LSS+  L +++ DV+DN+  F    F     E  + G  +  + A D DS ++ E +   + D       E+D  TG V++    DRE K+ Y+  VT  +K SP    +A ++IK+LD NDNDPKF    YSFSV E       +G V   D D   N   V+     D  +F    +  G I      D E +  +   + A D G P  RSS   V ++V+DENDN P   K  +  F       +     D++   D D+   N  + F++    P    +LFRI   +GEIT+     K +T  K   L  L +RV D
Sbjct:   80 DRETLRDCRSL-----VKGKPCYLEFEVSVTD--LLQNPSPRLIEGRIEVQDINDNTPQFPLSVLTISVPENTIMGALFSIPL--ATDRDSERNGVADYALTAGPDAATLFGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPVPKLLRIDRTTGIIYVKGPLDREEINSLSFYVVAR--DKGPQP---KSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAH-VHLSVEPDGGKF-VVQNGTGTILSSISFDREKESSYTFRLKAVDGGEP-PRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDVVEAEDLDSG-PNADLVFSIAGGNP---YQLFRISPSSGEITL----AKEMT-RKHGGLHRLVVRVSD 760

HSP 2 Score: 95.1301 bits (235), Expect = 1.630e-19
Identity = 131/557 (23.52%), Postives = 236/557 (42.37%), Query Frame = 3

Query:  354 SNPPKRKQ--IEICVRDKNDNCPKLQNPIHLTMI-ESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHT----CKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVT-------IPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQDLFLIEGPG----------IIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSID---ENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEI---NFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
             NP +  Q  + + V D NDN PK ++P +   + E++ +G  +   +A D+D   + +  Y L    D    KL  ID     + +   LD E   S +     + +  +PK   T V       +++ P +       VT       I E+ P  T +  +  +D D   N +   +   G   F +               ++    LDYE+++E  +   +   D+G   +   S+T ++ + V+DVNDN P       IF +D   EN P   + D+T TDADSG N ++   +    D       ++  NT  ++   +  D E   R   ++  +D G P    +  + +++ D +DN+ KF+   ++  V E     + +  +  +D D   +   +L+ + D     +   TG + S+  FDRE +  Y   +   +   P ++    + I +LD NDNDP   +  + S  +   +   +  +  V AED D   N  +V++    + YQ        G+I L + +  +   LH L++  +DRG P
Sbjct:  220 GNPQRYSQALLRVVVTDANDNSPKFEHPSYEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPVP-KLLRIDRTTGIIYVKGPLDREEINSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVA-GDVPFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRV--EIVAVDSG---NPALSSTNSLKVQVTDVNDNSPVF--SPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIV--GDSYIKGLFEIDPNT-GEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAHVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKP 764

[Close]

BLAST of Protocadherin 1 vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079])

HSP 1 Score: 154.066 bits (388), Expect = 9.572e-38
Identity = 213/707 (30.13%), Postives = 333/707 (47.10%), Query Frame = 3

Query:  243 DREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQ-NPIHLTMIESAKIG--FKLPLQEAVDNDSPLHSKSVYDLKCNADSKK-FKLTMIDN---KFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNV-LRYSIE---GPGQDLFLIE-GPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKN--------NIFSIDENVP-RMYLGDMTVTDADSGINGDVSCLVA--YPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYY---LTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFD-RLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPP---KFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLPKLIELKIRVFD 2264
            DRE L     L      K   C + F +S+ +  ++++  P+  +  I V+D NDN P+   + + +++ E+  +G  F +PL  A D DS  +  + Y L    D+   F L + D+   K PQL ++ +LD E   S+   ++A +   P+    A++ V V D ND+ P +   S++  + EN+P    ++Q+ A DSD   N  + YS+     P   L  I+   GII + G LD E++   + ++  +  D G      KS+   VTI V+D NDN P + I+          I +I E++P    +  + V+D D G N  V+C+VA   P      S+S   +   Y + T++  D+E      V+IV  D+G P LSS+  L +++ DV+DN+  F    F     E  + G  +  + A D DS ++ E +   + D       E+D  TG V++    DRE K+ Y+  VT  +K SP    +A ++IK+LD NDNDPKF    YSFSV E       +G V   D D   N   V+     D  +F    +  G I      D E +  +   + A D G P  RSS   V ++V+DENDN P   K  +  F       +     D++   D D+   N  + F++    P    +LFRI   +GEIT+     K +T  K   L  L +RV D
Sbjct:  157 DRETLRDCRSL-----VKGKPCYLEFEVSVTD--LLQNPSPRLIEGRIEVQDINDNTPQFPLSVLTISVPENTIMGALFSIPL--ATDRDSERNGVADYALTAGPDAATLFGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPVPKLLRIDRTTGIIYVKGPLDREEINSLSFYVVAR--DKGPQP---KSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAH-VHLSVEPDGGKF-VVQNGTGTILSSISFDREKESSYTFRLKAVDGGEP-PRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDVVEAEDLDSG-PNADLVFSIAGGNP---YQLFRISPSSGEITL----AKEMT-RKHGGLHRLVVRVSD 837

HSP 2 Score: 95.9005 bits (237), Expect = 1.099e-19
Identity = 131/561 (23.35%), Postives = 238/561 (42.42%), Query Frame = 3

Query:  342 SIVKSNPPKRKQ--IEICVRDKNDNCPKLQNPIHLTMI-ESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHT----CKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVT-------IPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQDLFLIEGPG----------IIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSID---ENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEI---NFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHP 1934
            ++   NP +  Q  + + V D NDN PK ++P +   + E++ +G  +   +A D+D   + +  Y L    D    KL  ID     + +   LD E   S +     + +  +PK   T V       +++ P +       VT       I E+ P  T +  +  +D D   N +   +   G   F +               ++    LDYE+++E  +   +   D+G   +   S+T ++ + V+DVNDN P       IF +D   EN P   + D+T TDADSG N ++   +    D       ++  NT  ++   +  D E   R   ++  +D G P    +  + +++ D +DN+ KF+   ++  V E     + +  +  +D D   +   +L+ + D     +   TG + S+  FDRE +  Y   +   +   P ++    + I +LD NDNDP   +  + S  +   +   +  +  V AED D   N  +V++    + YQ        G+I L + +  +   LH L++  +DRG P
Sbjct:  293 AVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPVP-KLLRIDRTTGIIYVKGPLDREEINSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVA-GDVPFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRV--EIVAVDSG---NPALSSTNSLKVQVTDVNDNSPVF--SPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIV--GDSYIKGLFEIDPNT-GEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAHVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKP 841

[Close]

BLAST of Protocadherin 1 vs. Planmine SMEST
Match: SMESG000010555.1 (SMESG000010555.1)

HSP 1 Score: 1650.18 bits (4272), Expect = 0.000e+0
Identity = 872/872 (100.00%), Postives = 872/872 (100.00%), Query Frame = 3

Query:   24 MDIFFIFLGSISWCLGCNFTFEEEESSVNDKGIRFNDIINVDGPRNKYHYSIVPESSVVSINQEGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLPKLIELKIRVFDPTFTEFKDHCVLKLKLSQFYIKTPSNDHQIQDTKGKFKEKSINEKEPPNVPNNQFDXXXXXXXXXXXXXXXXXXXXTCVAVFTKRCKEDEQEFSQKLERENPNPHSSGKFDKLNQHSLMKKSTIA 2639
            MDIFFIFLGSISWCLGCNFTFEEEESSVNDKGIRFNDIINVDGPRNKYHYSIVPESSVVSINQEGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCDTAVVTVTVIDDNDHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAILLIKILDINDNDPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPVSRSSTTTVIVSVIDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLPKLIELKIRVFDPTFTEFKDHCVLKLKLSQFYIKTPSNDHQIQDTKGKFKEKSINEKEPPNVPNNQFDSSIFLVVILIVFSVILLLLLTCVAVFTKRCKEDEQEFSQKLERENPNPHSSGKFDKLNQHSLMKKSTIA
Sbjct:    1 MDIFFIFLGSISWCLGCNFTFEEEESSVNDKGIRFNDIINVDGPRNKYHYSIVPESSVVSINQEGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNPIHLTMIESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACEPKCCDTAVVTVTVIDDNDHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQDLFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAILLIKILDINDNDPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQQRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPVSRSSTTTVIVSVIDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLPKLIELKIRVFDPTFTEFKDHCVLKLKLSQFYIKTPSNDHQIQDTKGKFKEKSINEKEPPNVPNNQFDSSIFLVVILIVFSVILLLLLTCVAVFTKRCKEDEQEFSQKLERENPNPHSSGKFDKLNQHSLMKKSTIA 872

[Close]

BLAST of Protocadherin 1 vs. Planmine SMEST
Match: SMESG000048913.1 (SMESG000048913.1)

HSP 1 Score: 330.487 bits (846), Expect = 5.747e-98
Identity = 257/793 (32.41%), Postives = 400/793 (50.44%), Query Frame = 3

Query:   15 NLKMDIFFIFLGSISWCLGCNFT----FEEEESSVNDKGIRFNDIINVDGPRNKYHYSIVPESSVVSIN-QEGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSN-PPKRKQIEICVRDKNDNCPKLQNPIHLTMI-ESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSH-----TCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSI---------EGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQ-QRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQ----KTLTCEKLPKLIELKIRVFDPTFTEFKDHCVLKLKL 2312
            N +M  F + L  I    G   +     E +E  +   GI     +N+   +N   Y ++   ++ +I+   G ++  R  DRE LC     S +C C +  C +   ++I  + +++SN PP+R    IC+ D NDN P          I E + IG +L L  A D DS   +   YD+KC+ +      ++  +K  +L     L      S       C L A +     +  + V V D NDH P W    + + I EN P ++ I    ATD+D+ Y  + YSI         +    +LF I+   G ++L G LD+E+  ++   +T+   DNG       S+  T  I + D NDN P I I   I  ++EN P  YL   TV D D   NG + C +    +  +L +S  +    Y+I+ S   D+E  S +++ I C D G+P L+S   + + + DV+DN V F +K     + E   IG+ + +I  +D D  S + + +    + +FV +D   G + +N++FDRETKDEY   V V EK + N TD+  ++++I DINDN P FD  YSFS+ E   ++  IG+V A D DL  NGTV Y Q  ++   +F F V   G+IRLF  LD + Q +H + IVA D+G P+S SS+TTV ++V+D N++PP+F+  +F + + C  + I ++L P TD D   +N +M + L  + P     LF+ID  TG I M + +     KT   EK    +E+K+ VFDPT   F+   +L++ L
Sbjct:   16 NFQMIFFILTLVVIIVGYGNGLSSHCDAEIKELDIYQMGIN----LNLTRGKNLKKYELIQHYNIFAIHPSTGFLQTIRSIDREALCHA---SNNCDCLKRKCVLE--LTIFASDLIQSNKPPERIYKTICIEDINDNSPSFPELTQTIEINEKSPIGTELELHSAQDRDSSDFAIIKYDMKCSENIFNLSFSIFRDKQYKLNHQVKLIVTQNISFRYDPIQCTLTAWDLNSSSSMRLIVKVNDINDHSPEWPNSKYYIRIKENLPLDSIIHTFQATDADTVYGKVSYSIGRIMVRDIPKTFSGNLFTIDSITGDMKLNGNLDFEERLQREYIVTIIAKDNGTPS---LSSPTTAVIDIEDFNDNPPIININRGIIDVEENTPPNYLDYFTVFDNDEDANGKIECEILEWGEYFNLKKSTANIPITYEIYLSQILDYEKQSMIALIIQCQDGGKPNLTSKKRIAVNVIDVNDNRVYFPQKTIRISIPENIPIGSEIIRISTIDLDKKSEVAFSIVHSSNCSFVNIDTNNGYLTTNEMFDRETKDEYAFEVQVVEKDNVNFTDTVKVILRISDINDNKPVFDAHYSFSIPENTSVDGFIGRVRAIDNDLGENGTVSYVQVNQISNQRFYFTVSNYGEIRLFHMLDIDKQNIHQVTIVARDQGRPISMSSSTTVFITVLDSNNHPPEFEKPFFALTLSCQIQTIDKNLFPSTDKDKSPENTKMNYLLDNIKPLEFKSLFKIDKLTGTIAMTVKENDCNFKTNNKEK----VEIKVSVFDPTKPLFRGSTILQIIL 792

[Close]

BLAST of Protocadherin 1 vs. Planmine SMEST
Match: SMESG000048913.1 (SMESG000048913.1)

HSP 1 Score: 329.717 bits (844), Expect = 7.024e-98
Identity = 247/748 (33.02%), Postives = 385/748 (51.47%), Query Frame = 3

Query:  138 INVDGPRNKYHYSIVPESSVVSIN-QEGIIRFKRGTDREWLCKLTDLSASCHCKEAVCKIPFGISIQENSIVKSN-PPKRKQIEICVRDKNDNCPKLQNPIHLTMI-ESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSH-----TCKLEACEPKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSI---------EGPGQDLFLIEG-PGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSESKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQ-QRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNRQMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQ----KTLTCEKLPKLIELKIRVFDPTFTEFKDHCVLKLKL 2312
            +N+   +N   Y ++   ++ +I+   G ++  R  DRE LC     S +C C +  C +   ++I  + +++SN PP+R    IC+ D NDN P          I E + IG +L L  A D DS   +   YD+KC+ +      ++  +K  +L     L      S       C L A +     +  + V V D NDH P W    + + I EN P ++ I    ATD+D+ Y  + YSI         +    +LF I+   G ++L G LD+E+  ++   +T+   DNG       S+  T  I + D NDN P I I   I  ++EN P  YL   TV D D   NG + C +    +  +L +S  +    Y+I+ S   D+E  S +++ I C D G+P L+S   + + + DV+DN V F +K     + E   IG+ + +I  +D D  S + + +    + +FV +D   G + +N++FDRETKDEY   V V EK + N TD+  ++++I DINDN P FD  YSFS+ E   ++  IG+V A D DL  NGTV Y Q  ++   +F F V   G+IRLF  LD + Q +H + IVA D+G P+S SS+TTV ++V+D N++PP+F+  +F + + C  + I ++L P TD D   +N +M + L  + P     LF+ID  TG I M + +     KT   EK    +E+K+ VFDPT   F+   +L++ L
Sbjct:   39 LNLTRGKNLKKYELIQHYNIFAIHPSTGFLQTIRSIDREALCHA---SNNCDCLKRKCVLE--LTIFASDLIQSNKPPERIYKTICIEDINDNSPSFPELTQTIEINEKSPIGTELELHSAQDRDSSDFAIIKYDMKCSENIFNLSFSIFRDKQYKLNHQVKLIVTQNISFRYDPIQCTLTAWDLNSSSSMRLIVKVNDINDHSPEWPNSKYYIRIKENLPLDSIIHTFQATDADTVYGKVSYSIGRIMVRDIPKTFSGNLFTIDSITGDMKLNGNLDFEERLQREYIVTIIAKDNGTPS---LSSPTTAVIDIEDFNDNPPIININRGIIDVEENTPPNYLDYFTVFDNDEDANGKIECEILEWGEYFNLKKSTANIPITYEIYLSQILDYEKQSMIALIIQCQDGGKPNLTSKKRIAVNVIDVNDNRVYFPQKTIRISIPENIPIGSEIIRISTIDLDKKSEVAFSIVHSSNCSFVNIDTNNGYLTTNEMFDRETKDEYAFEVQVVEKDNVNFTDTVKVILRISDINDNKPVFDAHYSFSIPENTSVDGFIGRVRAIDNDLGENGTVSYVQVNQISNQRFYFTVSNYGEIRLFHMLDIDKQNIHQVTIVARDQGRPISMSSSTTVFITVLDSNNHPPEFEKPFFALTLSCQIQTIDKNLFPSTDKDKSPENTKMNYLLDNIKPLEFKSLFKIDKLTGTIAMTVKENDCNFKTNNKEK----VEIKVSVFDPTKPLFRGSTILQIIL 774

[Close]

BLAST of Protocadherin 1 vs. Planmine SMEST
Match: SMESG000076350.1 (SMESG000076350.1)

HSP 1 Score: 175.637 bits (444), Expect = 8.940e-45
Identity = 166/572 (29.02%), Postives = 293/572 (51.22%), Query Frame = 3

Query:  384 ICVRDKNDNCPKLQNPIHLTMI-ESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDS-TYNVLRYSIEGPGQD------LFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKN-----NIFSIDENVPRM-YLGDMTVTDADSGINGDVSCLVAYPEDKISLSESK-MSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSP-NKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKE-INFQIGKVNAEDPDLRNNGTVVYTQQR----------LDEYQFPFF-VDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF 2003
            I ++D ND+ PK     +   I E+ ++G+++ L+ A D D   ++   Y +    D+  F +T   +    L +I++LD+ET  ++   L AC+   P  C    + ++V+D ND+ P+++   ++V I EN      +  ++A D DS  +  +RY   G  QD       ++    G I+L  +L+ + + +    L ++ +D G   S  K    TV + + DVN+ RP I I +       F++ EN   M +   + V+D D G+N +V C +    +   LS S+ +    IY +  +  FD EV S   V+++CSD G PKL++  E+ ++I+DV++ + +F K+ +   V E   IG  L ++ A D D+T+ L Y L   ++ AF  +D+  G +R+  + DRE  D+ ++ V   ++  P ++T +  + I I D+NDN P         V E +E +   + ++ A DPDL  NGTV +  QR          +DE +   F +D++ G + +++ LD E    + L I+  D+G P   +S   + ++V+D NDNPPK+
Sbjct:  266 ITIQDVNDHQPKFAESYYQIQISEAVQVGYRISLRTASDPDVEPNNVCTYFMHGFNDT--FNITF--SNLLYLIVINALDYETQINYKTTLVACDCGMPPLCGNQTLAISVLDINDNHPVFSQKEYKVIIKENAMVGEVVANVTAVDMDSGLFGQVRYRF-GQVQDPSVLSYFYISTYTGEIKLQRILNCKNIAQD-FSLNIEASDGG---SVPKVGYATVFVHLKDVNNQRPVININSLGPAKKDFNVKENQTLMSHFAIIWVSDGDIGVNAEVDCHLTVGAENFKLSNSQTVKGRDIYTLQPNRVFDREVDSHFQVRMLCSDRGTPKLTTEEEITVKIQDVNEFSPRFKKQNYTVNVSENSTIGLLLLQLHATDDDATAQLLYQLAPSQN-AFFFIDQYMGNLRTANILDREKGDKIELIVLAIDQGEPRSQTATTTVFITITDVNDNPPTVINPPKLQVKENEETLPMFLTQIQARDPDLGENGTVRFYIQRVEDKRGLAEKIDENRTKIFSIDEISGNLTIYKSLDREYIDSYILYIMVCDQGKP-QLTSIEAITLTVLDINDNPPKW 826

HSP 2 Score: 83.1889 bits (204), Expect = 5.671e-16
Identity = 94/320 (29.38%), Postives = 153/320 (47.81%), Query Frame = 3

Query:  744 SWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQDLFLI--EGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIY------IKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSES------------KMSSN-TIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKI---EAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPN 1625
            ++ V + EN+     ++QL ATD D+T  +L Y +  P Q+ F    +  G +R   +LD EK ++  I L V   D G  +S  ++AT TV I+++DVNDN P +       +K N    +E +P M+L  +   D D G NG V   +   EDK  L+E             ++S N TIY      S D E      + I+  D G+P+L+S   + L + D++DN  K+ +    +     K +     +I   +A D DS   +++ Y++T+  DL ++  D   G +R+ Q   RE    Y I +   +  +PN
Sbjct:  610 NYTVNVSENSTIGLLLLQLHATDDDATAQLL-YQL-APSQNAFFFIDQYMGNLRTANILDREKGDK--IELIVLAIDQGEPRS--QTATTTVFITITDVNDNPPTVINPPKLQVKEN----EETLP-MFLTQIQARDPDLGENGTVRFYIQRVEDKRGLAEKIDENRTKIFSIDEISGNLTIY-----KSLDREYIDSYILYIMVCDQGKPQLTSIEAITLTVLDINDNPPKWFQPVAHSTNITTKSVLAQDQRIIIAQASDPDSRPNANITYHVTEGDDLVYI--DAIIGDLRARQSI-RE--GHYLIKLVANDNGNPN 908

[Close]

BLAST of Protocadherin 1 vs. Planmine SMEST
Match: SMESG000076350.1 (SMESG000076350.1)

HSP 1 Score: 176.407 bits (446), Expect = 1.081e-44
Identity = 166/572 (29.02%), Postives = 293/572 (51.22%), Query Frame = 3

Query:  384 ICVRDKNDNCPKLQNPIHLTMI-ESAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLELISSLDHETTTSHTCKLEACE---PKCCXXXXXXXXXXXXXXHPPIWTVLSWQVTIPENTPSNTQIMQLSATDSDS-TYNVLRYSIEGPGQD------LFLIEGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIYIKN-----NIFSIDENVPRM-YLGDMTVTDADSGINGDVSCLVAYPEDKISLSESK-MSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSP-NKTDSAXXXXXXXXXXXXXPKFDRLYSFSVSERKE-INFQIGKVNAEDPDLRNNGTVVYTQQR----------LDEYQFPFF-VDQL-GKIRLFQRLDYEIQPLHHLIIVATDRGHPXXXXXXXXXXXXXXDENDNPPKF 2003
            I ++D ND+ PK     +   I E+ ++G+++ L+ A D D   ++   Y +    D+  F +T   +    L +I++LD+ET  ++   L AC+   P  C    + ++V+D ND+ P+++   ++V I EN      +  ++A D DS  +  +RY   G  QD       ++    G I+L  +L+ + + +    L ++ +D G   S  K    TV + + DVN+ RP I I +       F++ EN   M +   + V+D D G+N +V C +    +   LS S+ +    IY +  +  FD EV S   V+++CSD G PKL++  E+ ++I+DV++ + +F K+ +   V E   IG  L ++ A D D+T+ L Y L   ++ AF  +D+  G +R+  + DRE  D+ ++ V   ++  P ++T +  + I I D+NDN P         V E +E +   + ++ A DPDL  NGTV +  QR          +DE +   F +D++ G + +++ LD E    + L I+  D+G P   +S   + ++V+D NDNPPK+
Sbjct: 1403 ITIQDVNDHQPKFAESYYQIQISEAVQVGYRISLRTASDPDVEPNNVCTYFMHGFNDT--FNITF--SNLLYLIVINALDYETQINYKTTLVACDCGMPPLCGNQTLAISVLDINDNHPVFSQKEYKVIIKENAMVGEVVANVTAVDMDSGLFGQVRYRF-GQVQDPSVLSYFYISTYTGEIKLQRILNCKNIAQD-FSLNIEASDGG---SVPKVGYATVFVHLKDVNNQRPVININSLGPAKKDFNVKENQTLMSHFAIIWVSDGDIGVNAEVDCHLTVGAENFKLSNSQTVKGRDIYTLQPNRVFDREVDSHFQVRMLCSDRGTPKLTTEEEITVKIQDVNEFSPRFKKQNYTVNVSENSTIGLLLLQLHATDDDATAQLLYQLAPSQN-AFFFIDQYMGNLRTANILDREKGDKIELIVLAIDQGEPRSQTATTTVFITITDVNDNPPTVINPPKLQVKENEETLPMFLTQIQARDPDLGENGTVRFYIQRVEDKRGLAEKIDENRTKIFSIDEISGNLTIYKSLDREYIDSYILYIMVCDQGKP-QLTSIEAITLTVLDINDNPPKW 1963

HSP 2 Score: 85.5001 bits (210), Expect = 1.572e-16
Identity = 94/320 (29.38%), Postives = 153/320 (47.81%), Query Frame = 3

Query:  744 SWQVTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQDLFLI--EGPGIIRLLGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPFIY------IKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSES------------KMSSN-TIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIKDVDDNNVKFIKKFFATGVDEGKEIGTFLAKI---EAVDKDS--TSSLEYYLTDKKDLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPN 1625
            ++ V + EN+     ++QL ATD D+T  +L Y +  P Q+ F    +  G +R   +LD EK ++  I L V   D G  +S  ++AT TV I+++DVNDN P +       +K N    +E +P M+L  +   D D G NG V   +   EDK  L+E             ++S N TIY      S D E      + I+  D G+P+L+S   + L + D++DN  K+ +    +     K +     +I   +A D DS   +++ Y++T+  DL ++  D   G +R+ Q   RE    Y I +   +  +PN
Sbjct: 1747 NYTVNVSENSTIGLLLLQLHATDDDATAQLL-YQL-APSQNAFFFIDQYMGNLRTANILDREKGDK--IELIVLAIDQGEPRS--QTATTTVFITITDVNDNPPTVINPPKLQVKEN----EETLP-MFLTQIQARDPDLGENGTVRFYIQRVEDKRGLAEKIDENRTKIFSIDEISGNLTIY-----KSLDREYIDSYILYIMVCDQGKPQLTSIEAITLTVLDINDNPPKWFQPVAHSTNITTKSVLAQDQRIIIAQASDPDSRPNANITYHVTEGDDLVYI--DAIIGDLRARQSI-RE--GHYLIKLVANDNGNPN 2045

The following BLAST results are available for this feature:

BLAST of Protocadherin 1 vs. Ensembl Human
BLAST of Protocadherin 1 vs. Ensembl Celegans
BLAST of Protocadherin 1 vs. Ensembl Fly
BLAST of Protocadherin 1 vs. Ensembl Zebrafish
BLAST of Protocadherin 1 vs. Ensembl Xenopus
BLAST of Protocadherin 1 vs. Ensembl Mouse
BLAST of Protocadherin 1 vs. UniProt/SwissProt
BLAST of Protocadherin 1 vs. TrEMBL
BLAST of Protocadherin 1 vs. Ensembl Cavefish
BLAST of Protocadherin 1 vs. Ensembl Sea Lamprey
BLAST of Protocadherin 1 vs. Ensembl Yeast
BLAST of Protocadherin 1 vs. Ensembl Nematostella
BLAST of Protocadherin 1 vs. Ensembl Medaka
BLAST of Protocadherin 1 vs. Planmine SMEST

BLAST of Protocadherin 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
PCDH9	9.973e-44	30.16	protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]	[more]
PCDH9	1.062e-43	30.09	protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]	[more]
PCDH9	1.088e-43	30.16	protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]	[more]
PCDH9	1.098e-43	30.16	protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]	[more]
PCDHGB5	1.374e-39	27.58	protocadherin gamma subfamily B, 5 [Source:HGNC Sy...	[more]

BLAST of Protocadherin 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
fmi-1	7.194e-28	26.62	FlaMIngo (Cadherin plus 7TM domain) homolog [Sour...	[more]
fmi-1	1.966e-24	25.60	FlaMIngo (Cadherin plus 7TM domain) homolog [Sour...	[more]
cdh-4	2.597e-19	27.70	Cadherin-4 [Source:UniProtKB/TrEMBL;Acc:A0A1C3NSI...	[more]
cdh-1	2.768e-17	25.05	CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4...	[more]
hmr-1	1.721e-14	24.68	Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Pr...	[more]

BLAST of Protocadherin 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ds	3.120e-42	28.66	gene:FBgn0284247 transcript:FBtr0078045	[more]
ds	3.120e-42	28.66	gene:FBgn0284247 transcript:FBtr0343249	[more]
ft	5.430e-32	25.11	gene:FBgn0001075 transcript:FBtr0077478	[more]
stan	6.093e-32	26.96	gene:FBgn0024836 transcript:FBtr0303223	[more]
stan	6.093e-32	26.96	gene:FBgn0024836 transcript:FBtr0088214	[more]

BLAST of Protocadherin 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
pcdh2ab9	1.303e-40	29.01	protocadherin 2 alpha b 9 [Source:ZFIN;Acc:ZDB-GEN...	[more]
pcdh9	9.848e-40	30.13	protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1...	[more]
CR847522.1	1.004e-39	30.13	pep chromosome:GRCz11:CHR_ALT_CTG6_1_1:4874141:487...	[more]
pcdh9	1.215e-39	30.13	protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1...	[more]
pcdh9	1.215e-39	30.13	protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1...	[more]

BLAST of Protocadherin 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
pcdh17	7.076e-43	29.02	protocadherin 17 [Source:Xenbase;Acc:XB-GENE-48022...	[more]
pcdh17	9.246e-43	29.02	protocadherin 17 [Source:Xenbase;Acc:XB-GENE-48022...	[more]
pcdh17	1.176e-42	29.02	protocadherin 17 [Source:Xenbase;Acc:XB-GENE-48022...	[more]
pcdh17	1.271e-42	29.02	protocadherin 17 [Source:Xenbase;Acc:XB-GENE-48022...	[more]
pcdh17	1.749e-42	29.02	protocadherin 17 [Source:Xenbase;Acc:XB-GENE-48022...	[more]

BLAST of Protocadherin 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Pcdh9	1.863e-43	30.16	protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801...	[more]
Pcdh9	1.863e-43	30.16	protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801...	[more]
Pcdh9	1.863e-43	30.16	protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801...	[more]
Pcdh9	2.070e-43	30.16	protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801...	[more]
Pcdh9	2.681e-43	29.91	protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801...	[more]

BLAST of Protocadherin 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q9HC56\|PCDH9_HUMAN	4.789e-43	30.16	Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 P...	[more]
sp\|Q24292\|DS_DROME	2.711e-41	28.66	Protein dachsous OS=Drosophila melanogaster OX=722...	[more]
sp\|Q6X862\|PC11X_GORGO	2.425e-39	28.40	Protocadherin-11 X-linked OS=Gorilla gorilla goril...	[more]
sp\|Q6WXV7\|PC11X_PONPY	3.783e-39	29.94	Protocadherin-11 X-linked OS=Pongo pygmaeus OX=960...	[more]
sp\|Q6WYY1\|PC11X_PANPA	4.504e-39	28.05	Protocadherin-11 X-linked OS=Pan paniscus OX=9597 ...	[more]

BLAST of Protocadherin 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0S1VVS0	9.623e-45	28.49	Protocadherin-h OS=Lethenteron camtschaticum OX=98...	[more]
A0A401PH07	1.848e-41	29.40	Uncharacterized protein OS=Scyliorhinus torazame O...	[more]
A0A2U3WSP2	2.018e-41	30.09	protocadherin-9 OS=Odobenus rosmarus divergens OX=...	[more]
Q6AX49	3.062e-41	29.17	Uncharacterized protein OS=Xenopus laevis OX=8355 ...	[more]
A0A0P7XRW1	3.065e-41	30.85	Protocadherin-9-like OS=Scleropages formosus OX=11...	[more]

BLAST of Protocadherin 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
pcdh9	3.288e-41	29.81	protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1...	[more]
pcdh9	3.439e-41	29.81	protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1...	[more]
pcdh1a	5.866e-40	30.62	protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-...	[more]
pcdh1a	1.822e-39	30.62	protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-...	[more]
pcdh1b	3.210e-39	29.17	protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-...	[more]

BLAST of Protocadherin 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
pcdh11	1.977e-36	27.93	protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-...	[more]
ENSPMAT00000008517.1	7.039e-32	29.74	pep scaffold:Pmarinus_7.0:GL476786:43429:129410:1 ...	[more]
pcdh15b	5.628e-29	27.90	protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GEN...	[more]
ENSPMAT00000004043.1	2.194e-28	25.22	pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 g...	[more]
ENSPMAT00000004042.1	2.374e-28	25.22	pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 g...	[more]

BLAST of Protocadherin 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Protocadherin 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO40470	3.129e-35	30.10	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO46189	9.185e-33	28.46	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO33360	2.042e-32	27.82	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO35412	1.977e-30	27.23	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO34815	1.520e-29	26.64	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Protocadherin 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
pcdh9	2.671e-40	29.06	protocadherin 9 [Source:NCBI gene;Acc:101156238]	[more]
pcdh9	2.730e-40	29.14	protocadherin 9 [Source:NCBI gene;Acc:101156238]	[more]
pcdh9	4.213e-40	29.14	protocadherin 9 [Source:NCBI gene;Acc:101156238]	[more]
pcdh1a	8.753e-38	30.13	protocadherin-1 [Source:NCBI gene;Acc:101157079]	[more]
pcdh1a	9.572e-38	30.13	protocadherin-1 [Source:NCBI gene;Acc:101157079]	[more]

BLAST of Protocadherin 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000010555.1	0.000e+0	100.00	SMESG000010555.1	[more]
SMESG000048913.1	5.747e-98	32.41	SMESG000048913.1	[more]
SMESG000048913.1	7.024e-98	33.02	SMESG000048913.1	[more]
SMESG000076350.1	8.940e-45	29.02	SMESG000076350.1	[more]
SMESG000076350.1	1.081e-44	29.02	SMESG000076350.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30017193 ID=SMED30017193|Name=Protocadherin 1|organism=Schmidtea mediterranea sexual|type=transcript|length=2689bp
TAAAGAAAAAATCAAATTTAAAAATGGATATTTTTTTCATTTTCCTCGGA
AGCATCAGTTGGTGCCTCGGTTGTAATTTCACATTTGAGGAGGAGGAGAG
TTCAGTAAATGATAAAGGAATCCGATTCAATGACATTATCAACGTTGACG
GACCCCGGAACAAATATCACTATTCCATTGTTCCCGAGAGCTCTGTTGTG
AGCATCAATCAAGAGGGGATTATCCGCTTCAAACGAGGAACCGACAGAGA
ATGGCTATGTAAATTAACAGATCTATCAGCATCCTGCCATTGCAAGGAAG
CCGTTTGTAAAATACCTTTTGGGATATCAATTCAAGAGAATTCGATTGTA
AAATCCAACCCACCGAAACGAAAGCAAATTGAAATTTGCGTCCGAGATAA
AAACGACAACTGTCCAAAACTGCAGAATCCGATCCATTTAACAATGATAG
AGAGCGCTAAAATAGGATTCAAACTCCCTTTGCAGGAGGCGGTTGATAAT
GACAGTCCGTTGCATTCTAAATCGGTTTATGACTTAAAATGCAATGCGGA
TTCAAAGAAGTTTAAGTTAACGATGATAGATAATAAATTTCCTCAACTGG
AACTGATATCGTCATTGGACCATGAGACCACTACCAGTCACACATGCAAG
CTGGAGGCCTGTGAACCAAAATGTTGTGATACTGCTGTTGTCACAGTTAC
GGTCATTGATGACAATGACCATCCTCCGATATGGACGGTTCTGTCCTGGC
AAGTTACCATTCCGGAAAATACCCCTTCAAATACTCAAATCATGCAGTTG
TCGGCAACGGATTCGGATTCGACTTACAATGTATTAAGGTATTCAATTGA
AGGTCCTGGGCAGGATTTGTTTTTAATCGAAGGACCTGGGATAATTCGTT
TACTTGGGGTTTTAGATTATGAAAAATTAGAAGAGAAAACAATATTCCTT
ACAGTCAAAGTAACTGATAACGGTCTCTCTCAATCCACCATCAAATCTGC
CACAGGGACCGTCACAATTTCCGTTTCGGATGTCAACGACAATCGGCCAT
TCATTTACATAAAGAATAATATTTTCTCCATTGATGAAAATGTCCCCCGA
ATGTATCTAGGAGATATGACAGTGACAGATGCCGATTCCGGAATTAATGG
CGACGTTTCTTGCCTAGTTGCGTATCCGGAAGACAAAATAAGCTTATCTG
AATCGAAAATGTCTTCGAACACAATTTATGACATCTTCACGTCTTCTAGC
TTTGATCATGAGGTCAGTTCTCGGGTATCTGTGAAAATCGTATGCAGTGA
CAATGGCCAGCCTAAACTCAGTTCATCGGTGGAATTGTTCTTGCGAATCA
AAGACGTTGACGACAACAACGTTAAATTCATAAAGAAATTTTTTGCTACA
GGAGTTGACGAAGGCAAAGAAATCGGAACATTTCTGGCAAAAATTGAAGC
AGTCGACAAAGACTCGACATCAAGCTTGGAATATTACTTAACTGATAAAA
AGGATCTTGCTTTTGTTGAGCTTGATCGGCAAACCGGTGTTGTGAGATCG
AATCAGGTGTTTGATCGAGAAACGAAAGATGAGTACAAAATCAACGTAAC
CGTTCGGGAAAAGTTCTCACCAAACAAGACCGATTCAGCAATCTTATTGA
TAAAGATCCTCGACATCAATGACAATGATCCGAAGTTTGATCGACTCTAT
TCCTTTTCCGTTTCAGAAAGAAAAGAAATAAATTTTCAAATTGGAAAGGT
AAATGCCGAAGATCCTGATTTACGAAACAATGGAACCGTTGTGTACACCC
AACAAAGACTAGACGAATACCAGTTTCCGTTTTTCGTAGATCAACTTGGA
AAGATAAGGTTATTTCAGAGGCTTGATTATGAAATACAACCCCTTCACCA
TCTGATTATTGTAGCCACTGATCGAGGACATCCGGTGTCGAGATCAAGCA
CTACCACAGTCATAGTATCGGTCATAGATGAAAACGACAACCCGCCGAAA
TTTAAAAGCCGATATTTTGAAATAGACATTGGGTGCCACACGAGAGTTAT
AAGCCGTGATCTGATCCCGGTGACGGACAACGACACTGATACTAAAAACC
GTCAAATGCAATTCAATTTACAAATGGTCACCCCTTCATATTTGATGAAG
CTATTCCGCATTGACAACCAAACGGGAGAAATTACAATGGATATTGACCA
ACAGAAAACATTGACTTGTGAAAAGCTTCCAAAGTTAATTGAACTGAAAA
TCCGAGTTTTTGATCCGACATTTACGGAATTCAAAGACCACTGCGTGCTG
AAATTAAAATTGTCCCAGTTTTACATCAAAACACCTTCTAATGACCATCA
AATTCAAGATACTAAAGGAAAATTTAAAGAAAAAAGCATCAATGAAAAAG
AACCCCCCAATGTTCCTAATAACCAATTCGACTCTAGTATATTTCTCGTC
GTAATCTTGATAGTCTTTTCTGTCATTTTACTTTTACTCCTTACTTGTGT
CGCAGTTTTCACAAAACGATGTAAAGAAGATGAACAGGAATTTTCCCAAA
AATTGGAACGTGAAAATCCCAACCCCCATTCCAGTGGCAAATTTGACAAA
CTTAACCAACATTCATTGATGAAGAAGTCGACAATTGCAAATATCAACAA
TAACAATAACATCATCAACAACAACAACAACAACAATAA

protein sequence of SMED30017193-orf-1

>SMED30017193-orf-1 ID=SMED30017193-orf-1|Name=SMED30017193-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=895bp
KKKSNLKMDIFFIFLGSISWCLGCNFTFEEEESSVNDKGIRFNDIINVDG
PRNKYHYSIVPESSVVSINQEGIIRFKRGTDREWLCKLTDLSASCHCKEA
VCKIPFGISIQENSIVKSNPPKRKQIEICVRDKNDNCPKLQNPIHLTMIE
SAKIGFKLPLQEAVDNDSPLHSKSVYDLKCNADSKKFKLTMIDNKFPQLE
LISSLDHETTTSHTCKLEACEPKCCDTAVVTVTVIDDNDHPPIWTVLSWQ
VTIPENTPSNTQIMQLSATDSDSTYNVLRYSIEGPGQDLFLIEGPGIIRL
LGVLDYEKLEEKTIFLTVKVTDNGLSQSTIKSATGTVTISVSDVNDNRPF
IYIKNNIFSIDENVPRMYLGDMTVTDADSGINGDVSCLVAYPEDKISLSE
SKMSSNTIYDIFTSSSFDHEVSSRVSVKIVCSDNGQPKLSSSVELFLRIK
DVDDNNVKFIKKFFATGVDEGKEIGTFLAKIEAVDKDSTSSLEYYLTDKK
DLAFVELDRQTGVVRSNQVFDRETKDEYKINVTVREKFSPNKTDSAILLI
KILDINDNDPKFDRLYSFSVSERKEINFQIGKVNAEDPDLRNNGTVVYTQ
QRLDEYQFPFFVDQLGKIRLFQRLDYEIQPLHHLIIVATDRGHPVSRSST
TTVIVSVIDENDNPPKFKSRYFEIDIGCHTRVISRDLIPVTDNDTDTKNR
QMQFNLQMVTPSYLMKLFRIDNQTGEITMDIDQQKTLTCEKLPKLIELKI
RVFDPTFTEFKDHCVLKLKLSQFYIKTPSNDHQIQDTKGKFKEKSINEKE
PPNVPNNQFDSSIFLVVILIVFSVILLLLLTCVAVFTKRCKEDEQEFSQK
LERENPNPHSSGKFDKLNQHSLMKKSTIANINNNNNIINNNNNNN

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000099	neuron

Vocabulary: **INTERPRO**
Term	Definition
IPR002126	Cadherin-like_dom
IPR020894	Cadherin_CS
IPR015919	Cadherin-like_sf

Vocabulary: **molecular function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **cellular component**
Term	Definition
GO:0016020	membrane
GO:0005886	plasma membrane
GO:0016021	integral component of membrane
GO:0030426	growth cone
GO:0044291	cell-cell contact zone

Vocabulary: **biological process**
Term	Definition
GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007155	cell adhesion
GO:0030900	forebrain development

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 878..894
None	No IPR available	GENE3D	G3DSA:2.60.40.60		coord: 459..560 e-value: 2.1E-19 score: 72.1
None	No IPR available	GENE3D	G3DSA:2.60.40.60		coord: 134..239 e-value: 8.2E-12 score: 47.5 coord: 240..349 e-value: 2.1E-22 score: 81.7 coord: 561..664 e-value: 5.8E-24 score: 86.7
None	No IPR available	GENE3D	G3DSA:2.60.40.60		coord: 350..458 e-value: 9.2E-17 score: 63.5
None	No IPR available	GENE3D	G3DSA:2.60.40.60		coord: 665..770 e-value: 2.2E-7 score: 33.3
None	No IPR available	PANTHER	PTHR24028	FAMILY NOT NAMED	coord: 518..877 coord: 32..561
None	No IPR available	PROSITE	PS50268	CADHERIN_2	coord: 358..459 score: 11.909
None	No IPR available	PROSITE	PS50268	CADHERIN_2	coord: 460..562 score: 21.182
None	No IPR available	PROSITE	PS50268	CADHERIN_2	coord: 140..244 score: 12.457
None	No IPR available	PROSITE	PS50268	CADHERIN_2	coord: 245..351 score: 22.783
None	No IPR available	PROSITE	PS50268	CADHERIN_2	coord: 562..667 score: 22.892
None	No IPR available	CDD	cd11304	Cadherin_repeat	coord: 250..347 e-value: 4.57348E-23 score: 92.3765
None	No IPR available	CDD	cd11304	Cadherin_repeat	coord: 143..240 e-value: 9.52999E-7 score: 45.7674
None	No IPR available	CDD	cd11304	Cadherin_repeat	coord: 468..558 e-value: 3.60708E-20 score: 83.9021
None	No IPR available	CDD	cd11304	Cadherin_repeat	coord: 566..663 e-value: 1.52295E-24 score: 96.6137
None	No IPR available	CDD	cd11304	Cadherin_repeat	coord: 358..455 e-value: 5.28295E-14 score: 66.5681
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..23 score: 0.75
None	No IPR available	TMHMM	TMhelix		coord: 814..836
IPR002126	Cadherin-like	PRINTS	PR00205	CADHERIN	coord: 244..273 score: 29.5 coord: 649..666 score: 45.56 coord: 510..536 score: 25.47 coord: 330..349 score: 47.29
IPR002126	Cadherin-like	SMART	SM00112	CA_2	coord: 583..665 e-value: 1.1E-19 score: 81.4 coord: 372..457 e-value: 1.9E-9 score: 47.4 coord: 161..242 e-value: 0.012 score: 23.6 coord: 266..349 e-value: 2.8E-18 score: 76.7 coord: 481..560 e-value: 1.4E-16 score: 71.1
IPR002126	Cadherin-like	PFAM	PF00028	Cadherin	coord: 566..657 e-value: 3.2E-14 score: 53.1 coord: 468..553 e-value: 1.7E-9 score: 38.0 coord: 250..341 e-value: 4.5E-12 score: 46.3
IPR020894	Cadherin conserved site	PROSITE	PS00232	CADHERIN_1	coord: 655..665
IPR020894	Cadherin conserved site	PROSITE	PS00232	CADHERIN_1	coord: 339..349
IPR015919	Cadherin-like superfamily	SUPERFAMILY	SSF49313	Cadherin-like	coord: 550..674
IPR015919	Cadherin-like superfamily	SUPERFAMILY	SSF49313	Cadherin-like	coord: 344..451
IPR015919	Cadherin-like superfamily	SUPERFAMILY	SSF49313	Cadherin-like	coord: 134..236
IPR015919	Cadherin-like superfamily	SUPERFAMILY	SSF49313	Cadherin-like	coord: 655..807
IPR015919	Cadherin-like superfamily	SUPERFAMILY	SSF49313	Cadherin-like	coord: 448..563
IPR015919	Cadherin-like superfamily	SUPERFAMILY	SSF49313	Cadherin-like	coord: 232..365

Main menu

Protocadherin 1

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 10

Owlery

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