Dimer_Tnp_hAT domain-containing protein

Overview
NameDimer_Tnp_hAT domain-containing protein
Smed IDSMED30017174
Length (bp)2831
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Dimer_Tnp_hAT domain-containing protein (SMED30017174) t-SNE clustered cells

Violin plots show distribution of expression levels for Dimer_Tnp_hAT domain-containing protein (SMED30017174) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Dimer_Tnp_hAT domain-containing protein (SMED30017174) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Dimer_Tnp_hAT domain-containing protein (SMED30017174) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30017174

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 7

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
intestinal phagocyteSMED30017174SMESG000060573.1 Contig6342uc_Smed_v2PMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
intestinal phagocyteSMED30017174SMESG000060573.1 Contig6342newmark_estsPMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
intestinal phagocyteSMED30017174SMESG000060573.1 SMESG000058689.1 Contig7687uc_Smed_v2PMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
intestinal phagocyteSMED30017174SMESG000060573.1 SMESG000058689.1 Contig7687newmark_estsPMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
epidermisSMED30017174SMESG000060573.1 dd_Smed_v4_17969_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
reproductive organSMED30017174SMESG000060573.1 SMESG000058689.1 SMESG000022704.1 Contig18734uc_Smed_v2PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30017174SMESG000060573.1 SMESG000058689.1 SMESG000022704.1 Contig18734newmark_estsPMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Zebrafish
Match: si:ch211-240b21.2 (si:ch211-240b21.2 [Source:ZFIN;Acc:ZDB-GENE-060526-125])

HSP 1 Score: 67.0106 bits (162), Expect = 7.083e-12
Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = 3 
Query: 2073 IYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKI-DF-QDLINLFA 2366
            IY  +        ++LL +  +  L+ +F   +  +++  T P+T AEAE  FS LKRIK  LR++M+Q RLN L MLSIE  +  ++ DF Q +I  FA
Sbjct:  122 IYSKDEFRACCGALDLLQLFMENNLEEVFSETVTLVKILVTTPMTTAEAERCFSTLKRIKTFLRNSMTQERLNALAMLSIEKRLVTEMTDFNQKVIEKFA 221
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Zebrafish
Match: CR762475.1 (pep chromosome:GRCz11:4:55494751:55498830:1 gene:ENSDARG00000098243.2 transcript:ENSDART00000172605.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CR762475.1)

HSP 1 Score: 62.003 bits (149), Expect = 2.996e-9
Identity = 48/174 (27.59%), Postives = 94/174 (54.02%), Query Frame = 3 
Query: 1881 LDCIIGNIKRRFNTAKEIDSLFNVLWLFHNL--NDEEIHTKSNKLQKVYENDIDDNLGEEILHLKS---IYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLF---ARRKV 2378
            LD I   + RRF     + +   +L  F +L  +D  + T + +  +  +   +    EE   LK+   ++ T  ++  +    +L+I+K+     +FP ++  ++++ T+PV+ A  E SFS ++ IK+ LRS  S+ RL+DL +++IE ++   +D  ++IN+F   A R+V
Sbjct:  733 LDTITEELGRRFKVDGTMPT-GKILQSFQSLTVHDNWVGTPNTEAVQAIQTLCNFYSVEEEQQLKTELKVFHTTFKSSGMK--SMLSILKETSGQHVFPALVEMLKVYATLPVSTATVERSFSKMRLIKNQLRSLCSEERLSDLLLIAIEKDIP--VDHSEVINIFKHMAHRRV 901
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Xenopus
Match: ENSXETT00000043220.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:7:36411169:36451375:1 gene:ENSXETG00000018966.1 transcript:ENSXETT00000043220.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 98.9821 bits (245), Expect = 1.280e-20
Identity = 51/96 (53.12%), Postives = 67/96 (69.79%), Query Frame = 3 
Query: 2097 KSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRK 2384
            KS +P++L  +I+   L   +PNI  A R+F T PVTVA  + SFS LK IK+ LRS+M Q RL++L +LSIE EMA+KIDF D+I+ FA  K RK
Sbjct:  624 KSATPLDLCQMIQDYSLADCYPNIDTAFRIFLTSPVTVASCKRSFSKLKLIKNYLRSSMEQERLSNLSILSIEHEMARKIDFDDVIDHFAAMKARK 719
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. TrEMBL
Match: A0A3B1IJ48 (Uncharacterized protein OS=Astyanax mexicanus OX=7994 PE=4 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.223e-45
Identity = 75/171 (43.86%), Postives = 106/171 (61.99%), Query Frame = 3 
Query: 1881 LDCIIGNIKRRFNTAKEIDSLFNVLWLFHNLNDEEIHTKSNKLQKVYENDIDDNLGEEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRKATF 2393
            +D II  +  RF T   I   F  +    ++ + +I T    L K+Y  D+      E+LH  +IYD     K+LS +ELLN I +M+L  +F  I IA+R+FCT+P+TVA  E +FS LK +K+ LRSTM Q RLN L +LSIES++AK++DF DLI+ FA +K R+  F
Sbjct:  610 MDSIISALSARFQTTANICETFAPILKLSDMTEAQIKTTCRALAKIYHMDLSQEFENEVLHFCTIYDATFP-KNLSSLELLNAIWEMQLQSIFGEICIALRIFCTLPITVAGGERAFSKLKLVKNYLRSTMGQDRLNSLAILSIESQLAKQLDFTDLISDFANKKTRQWAF 779

HSP 2 Score: 71.633 bits (174), Expect = 1.223e-45
Identity = 29/89 (32.58%), Postives = 57/89 (64.04%), Query Frame = 2 
Query: 1577 GQSISSKFVIYIESFKFLVMAKIWYKVLQVINYRNIVLQARDATIDVEVANLSSLLDELQTIRDSWETLFNECKLFGSFLEINTVFETK 1843
             +S ++  + Y ++F  +V+  +W K+LQ I+ RN++LQA D ++DVE AN+ +L +E+Q +R+ W++L  E  L    +++   F ++
Sbjct:  484 AKSEANGLINYFKTFDAIVLLTVWVKILQCIDNRNVILQAGDISLDVEAANIKALQEEMQALRNRWDSLLAEATLVAHAMDVPDHFRSE 572
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. TrEMBL
Match: A0A2S2Q7V0 (Zinc finger MYM-type protein 1 (Fragment) OS=Sipha flava OX=143950 GN=ZMYM1_122 PE=4 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.626e-44
Identity = 85/182 (46.70%), Postives = 117/182 (64.29%), Query Frame = 3 
Query: 1848 VKGKNGGTN*KLDCIIGNIKRRFNTAKEIDSLFNVLWLFHNLNDEEIHTKSNKLQKVYENDIDDNLGEEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRKATF 2393
             K KN   N  LD +IG++  RF +   +   F+VLWL   +  ++I  K+ +L K Y  D+ D L +E+  LK IY  N   K+LSP +LLN IK   L+ LFPN+ +A+R+F TIP TVA AE SFSVLKR+K+VLRSTM Q+RL+ LE+L++E E+AK  +    I+ FA +K RK T 
Sbjct:  105 TKFKNDVFNIILDSVIGDMTVRFESVHSLCERFSVLWLNKEMTIDQIQEKTTRLVKQYPKDLGDELTDELQSLKLIYSANFGEKTLSPWDLLNAIKTSNLENLFPNLTVALRIFITIPATVASAERSFSVLKRVKNVLRSTMCQNRLSSLEVLAVEKELAKNTNLDAAIDGFAMKKARKGTL 286

HSP 2 Score: 52.373 bits (124), Expect = 1.626e-44
Identity = 30/86 (34.88%), Postives = 51/86 (59.30%), Query Frame = 2 
Query: 1613 ESFKFLVMAKIWYKVLQVINYRNIVLQARDATIDVEVANLSSLLDELQTIR-DSWETLFNECKLFGSFLEINTVFET--KRSKRKK 1861
            E    L++A IW+K+L+ I+  N VLQ +  T+DV   NLSSL+++L  IR + ++ + NE  +    +     FE   KR++++K
Sbjct:    2 ERVNCLLLASIWFKILKSIDIVNRVLQCKSGTLDVASKNLSSLIEDLHKIRNEGYDNILNETLIVAKNIGWPQYFEEELKRTRKRK 87
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. TrEMBL
Match: A0A3B3SZZ1 (Uncharacterized protein OS=Paramormyrops kingsleyae OX=1676925 PE=4 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 2.470e-41
Identity = 76/171 (44.44%), Postives = 101/171 (59.06%), Query Frame = 3 
Query: 1881 LDCIIGNIKRRFNTAKEIDSLFNVLWLFHNLNDEEIHTKSNKLQKVYENDIDDNLGEEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRKATF 2393
            +D II ++  RF T   I   F  +     L+D +I T    L   Y  D+      EI HL +I+     +   SP+ LLN I KM+L  +F ++ IA R+FCT+PVTVA  E  FS LK IK  LRSTMSQ RLN+L +LSIES++A K+DF+DLI  FA +K R+  F
Sbjct:  726 MDHIICDLDMRFKTTAGIVEEFAAIIKVGQLSDCDISTVCQPLISKYTKDLTPQFENEIRHLNAIFSVTFSD--CSPLALLNAIHKMELQSIFGDVCIAPRIFCTLPVTVACGERVFSKLKLIKSYLRSTMSQERLNNLAILSIESQLALKLDFKDLIEDFASKKSRRLAF 894

HSP 2 Score: 70.8626 bits (172), Expect = 2.470e-41
Identity = 35/92 (38.04%), Postives = 55/92 (59.78%), Query Frame = 2 
Query: 1607 YIESFKFLVMAKIWYKVLQVINYRNIVLQARDATIDVEVANLSSLLDELQTIRDSWETLFNECKLFGSFLEINTVFE---TKRSKRKKWGNE 1873
            Y  SF  +V+  IW KVLQ I+ RNI+LQ+   +++VE AN+  L +E+Q +RDSW+   +E  L  S + +   F     ++ KRK+  +E
Sbjct:  610 YFSSFDAIVLLTIWVKVLQCIDDRNIILQSGKISLEVEAANVRDLKNEIQNLRDSWDAFLSEASLIASQMGVPPKFNKELGRQRKRKRLSDE 701
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. TrEMBL
Match: H3BBS4 (Uncharacterized protein OS=Latimeria chalumnae OX=7897 PE=4 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.559e-37
Identity = 79/169 (46.75%), Postives = 110/169 (65.09%), Query Frame = 3 
Query: 1881 LDCIIGNIKRRFNTAKEIDSLFNVLWLFHNLNDEEIHTKSNKLQKVYENDIDDNLGEEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRKA 2387
            +D II  +  RF + ++I + F  +  F N+N +EI T   KL   Y  D+   L  E+ HLK IY+   Q+ +L  ++LLN I KMKL+ +F  I IAIR+FCT+PVTVAE E +FS L  IK+ LRSTMSQ RL+ L +LS E E+A+KIDF+D+I  FA +K ++ 
Sbjct:  287 MDNIISELNHRFQSVRDICNDFAPVLKFKNMNADEIITSCKKLANKYSQDLTSGLASEVQHLKKIYNATFQS-NLKLLDLLNAIYKMKLETIFGEICIAIRIFCTLPVTVAEGERAFSKLSIIKNYLRSTMSQDRLSSLAILSTEYELARKIDFRDIIRDFANKKAQQC 454

HSP 2 Score: 41.5874 bits (96), Expect = 2.559e-37
Identity = 20/69 (28.99%), Postives = 43/69 (62.32%), Query Frame = 2 
Query: 1676 RNIVLQARDATIDVEVANLSSLLDELQTIRDSWETLFNECKLFGSFLEINTVFETK---RSKRKKWGNE 1873
            RN++LQ+   ++D E AN+++L +E+    + W  + +E ++  + +E+   F++K   + KRK++ NE
Sbjct:  200 RNLLLQSAGVSLDTEAANIANLQEEM----NEWNAIISEARMVANLMEVVPEFKSKINRKIKRKRFHNE 264
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. TrEMBL
Match: H3BBS5 (Dimer_Tnp_hAT domain-containing protein OS=Latimeria chalumnae OX=7897 PE=4 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.112e-33
Identity = 75/157 (47.77%), Postives = 102/157 (64.97%), Query Frame = 3 
Query: 1917 NTAKEIDSLFNVLWLFHNLNDEEIHTKSNKLQKVYENDIDDNLGEEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRKA 2387
            N   E++  F  +  F N+N +EI T   KL   Y  D+   L  E+ HLK IY+   Q+ +L  ++LLN I KMKL+ +F  I IAIR+FCT+PVTVAE E +FS L  IK+ LRSTMSQ RL+ L +LS E E+A+KIDF+D+I  FA +K + +
Sbjct:   66 NIISELNHRFQSVLKFKNMNADEIITSCKKLANKYSQDLTSGLASEVQHLKKIYNATFQS-NLKLLDLLNAIYKMKLETIFGEICIAIRIFCTLPVTVAEGERAFSKLSIIKNYLRSTMSQDRLSSLAILSTEYELARKIDFRDIIRDFANKKAQHS 221
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000033195.1 (pep primary_assembly:Astyanax_mexicanus-2.0:16:11277158:11279506:-1 gene:ENSAMXG00000030798.1 transcript:ENSAMXT00000033195.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 143.665 bits (361), Expect = 7.736e-49
Identity = 75/171 (43.86%), Postives = 106/171 (61.99%), Query Frame = 3 
Query: 1881 LDCIIGNIKRRFNTAKEIDSLFNVLWLFHNLNDEEIHTKSNKLQKVYENDIDDNLGEEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRKATF 2393
            +D II  +  RF T   I   F  +    ++ + +I T    L K+Y  D+      E+LH  +IYD     K+LS +ELLN I +M+L  +F  I IA+R+FCT+P+TVA  E +FS LK +K+ LRSTM Q RLN L +LSIES++AK++DF DLI+ FA +K R+  F
Sbjct:  610 MDSIISALSARFQTTANICETFAPILKLSDMTEAQIKTTCRALAKIYHMDLSQEFENEVLHFCTIYDATFP-KNLSSLELLNAIWEMQLQSIFGEICIALRIFCTLPITVAGGERAFSKLKLVKNYLRSTMGQDRLNSLAILSIESQLAKQLDFTDLISDFANKKTRQWAF 779

HSP 2 Score: 71.633 bits (174), Expect = 7.736e-49
Identity = 29/89 (32.58%), Postives = 57/89 (64.04%), Query Frame = 2 
Query: 1577 GQSISSKFVIYIESFKFLVMAKIWYKVLQVINYRNIVLQARDATIDVEVANLSSLLDELQTIRDSWETLFNECKLFGSFLEINTVFETK 1843
             +S ++  + Y ++F  +V+  +W K+LQ I+ RN++LQA D ++DVE AN+ +L +E+Q +R+ W++L  E  L    +++   F ++
Sbjct:  484 AKSEANGLINYFKTFDAIVLLTVWVKILQCIDNRNVILQAGDISLDVEAANIKALQEEMQALRNRWDSLLAEATLVAHAMDVPDHFRSE 572
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000042715.1 (pep primary_assembly:Astyanax_mexicanus-2.0:16:11855083:11857132:-1 gene:ENSAMXG00000035113.1 transcript:ENSAMXT00000042715.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 120.939 bits (302), Expect = 9.163e-28
Identity = 63/168 (37.50%), Postives = 105/168 (62.50%), Query Frame = 3 
Query: 1881 LDCIIGNIKRRFNTAKEIDSLFNVLWLFHNLNDEEIHTKSNKLQKVYENDIDDNLGEEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRK 2384
            +D ++  +  R N    +  LF+VL++  N+++ E+  K+N L   Y +D++ +L +E++  KS     I  K   P ++L  +  + L   FPN+ IA+RLF T+P+T  E E SFS L RIK+ LR  M Q+RLN L +L+IES++ ++++F +L++ FAR+K RK
Sbjct:  492 IDKLVSCLNHRLNAYTHLTELFDVLFMPDNMSNSELTLKANSLAAAYPSDLNMSLADELIQYKSF----ITEKEKHPSKMLKTMINLNLQSTFPNVYIALRLFLTVPITNCEGERSFSKLARIKNELRIRMRQNRLNSLSLLAIESDLVRQLNFDELVDDFARKKSRK 655
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000035531.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000029.1:6285841:6288423:1 gene:ENSAMXG00000041958.1 transcript:ENSAMXT00000035531.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 118.242 bits (295), Expect = 2.699e-27
Identity = 63/168 (37.50%), Postives = 105/168 (62.50%), Query Frame = 3 
Query: 1881 LDCIIGNIKRRFNTAKEIDSLFNVLWLFHNLNDEEIHTKSNKLQKVYENDIDDNLGEEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRK 2384
            +D ++  +  R N    +  LF+VL++  N+++ E+  K+N L   Y +D++ +L +E++  KS     I  K   P ++L  +  + L   FPN+ IA+RLF T+P+T  E E SFS L RIK+ LR  M Q+RLN L +L+IES++ ++++F +L++ FAR+K RK
Sbjct:  694 IDKLVSCLNHRLNAYTHLTELFDVLFMPDNMSNSELILKANLLAAAYPSDLNMSLADELIQYKSF----ITEKEKHPSKMLKTMINLNLQSTFPNVYIALRLFLTVPITNCEGERSFSKLARIKNELRIRMRQNRLNSLSLLAIESDLVRQLNFDELVDDFARKKSRK 857

HSP 2 Score: 24.6386 bits (52), Expect = 2.699e-27
Identity = 24/100 (24.00%), Postives = 43/100 (43.00%), Query Frame = 2 
Query: 1580 QSISSKFVIYIESFKFLVMAKIWYKVLQVINYRNIVLQARDATIDVEVANLSSLLDELQTIRDSWETLFNECKLFGSFLEINTV------FETKRSKRKK 1861
            +S +S     +++ +   MA  W  +LQ     ++ LQ  D  I      L SL D +   RD++E         G+ L + T        + +R+K++K
Sbjct:  573 RSEASALCDKLDTLETAFMAYFWDTILQRFQASSLQLQKHDIDICTAPQLLLSLRDFVAAQRDNFEV------FEGAALNVTTAVSQEYRHDLQRTKKRK 666
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000036272.1 (pep primary_assembly:Astyanax_mexicanus-2.0:20:11935414:11938921:1 gene:ENSAMXG00000041670.1 transcript:ENSAMXT00000036272.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 102.834 bits (255), Expect = 5.073e-25
Identity = 65/177 (36.72%), Postives = 99/177 (55.93%), Query Frame = 3 
Query: 1881 LDCIIGNIKRRFNTAKEIDSLFNVLWLF---HNLNDEEIHTKS----NKLQKVYENDIDDN-LGEEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRKA 2387
            +D  + +++ RF T  ++   F VL  F   H ++ +++H        KL    E DID   + +EI++L  +      +   +  ELL  +    L  ++PN+ IA+R+  T+PVTVA AE SFS LK IK  LRSTM Q RL+ L ++SI +E+A  +   DLI+ FA RK R+A
Sbjct:  649 VDSALTSLQERFETMSQVRDTFGVLLDFQKVHGISKQDLHNHCMDVEKKLTDKGEADIDGQEMMQEIINLPQL------SPQTTAFELLTYLHDNSLQEVYPNLWIALRIALTLPVTVASAERSFSKLKLIKTYLRSTMGQERLSGLAVISINAEVAHSLSLDDLISDFAARKARRA 819

HSP 2 Score: 32.7278 bits (73), Expect = 5.073e-25
Identity = 24/91 (26.37%), Postives = 42/91 (46.15%), Query Frame = 2 
Query: 1610 IESFKFLVMAKIWYKVLQVINYRNIVLQARDATIDVEVANLSSLLDELQTIRDS-WETLFNECKLFGSFLEINTVFETK--RSKRKKWGNE 1873
            + SF+FL+   +W +VL V +  N VLQ+    +D+    + +  + L   R S +       K     L I    + K  RS ++++G E
Sbjct:  537 VGSFRFLICTVVWAEVLSVTSQVNKVLQSSSMQLDIAARLIKTAKESLTKYRQSGFSEAIESAKELCEALNIEPELKQKRLRSTKRQFGYE 627
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000055782.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02001476.1:1798:4262:-1 gene:ENSAMXG00000042376.1 transcript:ENSAMXT00000055782.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 96.6709 bits (239), Expect = 4.890e-20
Identity = 62/175 (35.43%), Postives = 95/175 (54.29%), Query Frame = 3 
Query: 1881 LDCIIGNIKRRFNTAKEIDSLFNVLWLFHNL----NDEEIHTKSNKLQKVYENDIDDNLGEEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRKATF 2393
            +D  + +I  RF       SLF  L+  +N+     ++ +     KL++   +    +L  E+    S++  +I     SP ++L+ I K  L  L+ N+ IA+RL  T+P+TVA  E SFS LK IK+ LRSTMSQ RL  L M+SIE  + + ++ +D+IN FA  K R   F
Sbjct:  574 IDTALISISERFTQVDVFFSLFGFLYYANNMKKAIQEDTLEDSCKKLERTLGDVDSQDLVLEVTAAVSVFPDHIS----SPADILDYIYKENLLELYGNLSIALRLLLTLPITVASGERSFSSLKLIKNFLRSTMSQERLTGLAMISIEQRVRRSLNMEDIINAFAETKTRMVQF 744
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Nematostella
Match: EDO40596 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S6Q7])

HSP 1 Score: 65.855 bits (159), Expect = 1.876e-12
Identity = 42/126 (33.33%), Postives = 72/126 (57.14%), Query Frame = 3 
Query: 2013 KVYENDI--DDNLGEEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRK 2384
            K Y +D+   D L  E++H +      I+ +S+ P   +N +K    +  +PN+ + +R+ CT+ VT AE+E SFS +KR+K  LR+TMS  R + L ++S+     + +D   +I+ FA R  R+
Sbjct:   36 KFYTDDLVSPDVLDVELVHWR------IEEESI-PRSAVNALKNCDAE-FYPNVHVLLRILCTLSVTSAESERSFSTMKRLKTYLRNTMSTERESSLALISVHYN--RSLDVDAIIDTFATRHPRR 151
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Nematostella
Match: EDO40662 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S6J7])

HSP 1 Score: 70.4774 bits (171), Expect = 2.096e-12
Identity = 42/126 (33.33%), Postives = 75/126 (59.52%), Query Frame = 3 
Query: 2013 KVYENDID--DNLGEEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRK 2384
            K Y +D++  D L  E++  +S + T ++ +S+ P   ++ +K    +  +PN+ + +R+ CT+PVT AE+E SFS +KR+K  LR+TMS  R   L ++S+     + +D   +I+ FA R  R+
Sbjct:  182 KFYTDDLESPDVLDVELVRWRSKW-TRVEEESI-PRSAVDALKNCDAE-FYPNVHVLLRILCTLPVTSAESERSFSTMKRLKTYLRNTMSTEREPSLALISVHYN--RSLDVDAIIDTFATRHPRR 302
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Nematostella
Match: EDO32247 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SVL6])

HSP 1 Score: 52.373 bits (124), Expect = 3.407e-8
Identity = 37/128 (28.91%), Postives = 67/128 (52.34%), Query Frame = 3 
Query: 2019 YENDIDDNLG--EEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFAR---RKVRKA 2387
            Y  D+ + +G   E+L  + ++        + P  L   ++ +  D  F NI   +++  T+P++ A  E S S L+ +K  LRSTM++ RLN L ++    +M   +D   +I+LFA+   R++R A
Sbjct:    1 YRQDMPNYIGLQAELLLWERLWKGRDNRGEVIPDTLKATLEDIDKDA-FVNIYFMLKILITLPISSASCERSISSLRNLKTYLRSTMTEDRLNGLALMYTHKDM--DLDLDRIIDLFAQLHPRRMRMA 125
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Nematostella
Match: EDO35148 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SMD4])

HSP 1 Score: 51.6026 bits (122), Expect = 7.379e-8
Identity = 36/128 (28.12%), Postives = 67/128 (52.34%), Query Frame = 3 
Query: 2019 YENDIDDNLG--EEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFAR---RKVRKA 2387
            Y  D+ + +G   E+L  + ++        + P  L   ++ +  D  + NI   +++  T+P++ A  E S S L+ +K  LRSTM++ RLN L ++    +M   +D   +I+LFA+   R++R A
Sbjct:    1 YRQDMPNYIGLQAELLLWERLWKGRDNRGEVIPDTLKATLENIDKDA-YVNIYFMLKILITLPISSASCERSISSLRNLKTYLRSTMTEDRLNGLALMYTHKDM--DLDLDRIIDLFAQLHPRRMRMA 125
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Nematostella
Match: EDO33687 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SRH2])

HSP 1 Score: 50.8322 bits (120), Expect = 1.323e-7
Identity = 28/80 (35.00%), Postives = 48/80 (60.00%), Query Frame = 3 
Query: 2157 FPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFAR---RKVRKA 2387
            + NI   +++  T+P++ A  E S S L+ +K  LRSTM++ RLN L ++    +M   +D   +I+LFA+   R++R A
Sbjct:   46 YVNIYFMLKILITLPISSASCERSISSLRNLKTYLRSTMTEDRLNGLALMYTHKDM--DLDLDRIIDLFAQLHPRRMRMA 123
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000028133.1 (zinc finger MYM-type protein 1-like [Source:NCBI gene;Acc:111948955])

HSP 1 Score: 106.301 bits (264), Expect = 6.048e-23
Identity = 64/173 (36.99%), Postives = 103/173 (59.54%), Query Frame = 3 
Query: 1881 LDCIIGNIKRRFNTAKEIDSLFNVLWLFHNLNDEEIHTKSNKLQKV--YENDIDDNLGEEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRKATF 2393
            +D  +  I  RF+T + + + F VL  F +L DEE+  +   L  +  +E + D +  E +  +K++   N+ + + S +EL++ +    L  ++PN   A+R+  T+PVTVA+AE SFS LK IK  LRSTMSQ RL +L ++SI   + ++I + D+I+ FA RK RK  F
Sbjct:  681 VDEALSAIAERFSTLEVVQNRFGVLTNFPSLGDEELTEQCEALGNILHFEKNWDLDSRELVQEIKNL--PNLPSTTPSLLELISFMSDKDLSEIYPNFWTALRIALTLPVTVAQAERSFSKLKLIKSYLRSTMSQERLTNLAVVSINHSVGEQISYDDVIDEFASRKARKVRF 851
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000042294.1 (zinc finger MYM-type protein 1-like [Source:NCBI gene;Acc:110016639])

HSP 1 Score: 106.301 bits (264), Expect = 6.048e-23
Identity = 64/173 (36.99%), Postives = 103/173 (59.54%), Query Frame = 3 
Query: 1881 LDCIIGNIKRRFNTAKEIDSLFNVLWLFHNLNDEEIHTKSNKLQKV--YENDIDDNLGEEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRKATF 2393
            +D  +  I  RF+T + + + F VL  F +L DEE+  +   L  +  +E + D +  E +  +K++   N+ + + S +EL++ +    L  ++PN   A+R+  T+PVTVA+AE SFS LK IK  LRSTMSQ RL +L ++SI   + ++I + D+I+ FA RK RK  F
Sbjct:  681 VDEALSAIAERFSTLEVVQNRFGVLTNFPSLGDEELTEQCEALGNILHFEKNWDLDSRELVQEIKNL--PNLPSTTPSLLELISFMSDKDLSEIYPNFWTALRIALTLPVTVAQAERSFSKLKLIKSYLRSTMSQERLTNLAVVSINHSVGEQISYDDVIDEFASRKARKVRF 851
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000045044.1 (zinc finger MYM-type protein 1-like [Source:NCBI gene;Acc:111948193])

HSP 1 Score: 106.301 bits (264), Expect = 6.048e-23
Identity = 64/173 (36.99%), Postives = 103/173 (59.54%), Query Frame = 3 
Query: 1881 LDCIIGNIKRRFNTAKEIDSLFNVLWLFHNLNDEEIHTKSNKLQKV--YENDIDDNLGEEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRKATF 2393
            +D  +  I  RF+T + + + F VL  F +L DEE+  +   L  +  +E + D +  E +  +K++   N+ + + S +EL++ +    L  ++PN   A+R+  T+PVTVA+AE SFS LK IK  LRSTMSQ RL +L ++SI   + ++I + D+I+ FA RK RK  F
Sbjct:  681 VDEALSAIAERFSTLEVVQNRFGVLTNFPSLGDEELTEQCEALGNILHFEKNWDLDSRELVQEIKNL--PNLPSTTPSLLELISFMSDKDLSEIYPNFWTALRIALTLPVTVAQAERSFSKLKLIKSYLRSTMSQERLTNLAVVSINHSVGEQISYDDVIDEFASRKARKVRF 851
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000027735.1 (pep primary_assembly:ASM223467v1:9:30712608:30715295:1 gene:ENSORLG00000030268.1 transcript:ENSORLT00000027735.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 60.4622 bits (145), Expect = 6.332e-9
Identity = 28/60 (46.67%), Postives = 42/60 (70.00%), Query Frame = 3 
Query: 2193 TIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARR 2372
             +PV+ A  E SFS LK IK  LRST+S  RL++L +LS+ES  A+ I+  D +++FA++
Sbjct:  592 ALPVSTASCERSFSTLKLIKTALRSTISDERLSNLGVLSVESRRARAINLDDFVDVFAKK 651
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Planmine SMEST
Match: SMESG000060573.1 (SMESG000060573.1)

HSP 1 Score: 322.013 bits (824), Expect = 4.305e-100
Identity = 159/169 (94.08%), Postives = 161/169 (95.27%), Query Frame = 3 
Query: 1887 CIIGNIKRRFNTAKEIDSLFNVLWLFHNLNDEEIHTKSNKLQKVYENDIDDNLGEEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRKATF 2393
            CIIGNI RRFN AKEIDSLFNVLWLFHNLNDEEIHTKS KLQKVYENDIDDNLGEEILHLKSIYD NIQNKSLSPIELLNIIKKMKLDVLFPNIIIAI LFCTIPVTVAEAE SFSVLKRIKDVLRSTMSQHRLNDL +LSIESEMAKKIDFQD+IN FARRKVRKATF
Sbjct:  301 CIIGNITRRFNAAKEIDSLFNVLWLFHNLNDEEIHTKSEKLQKVYENDIDDNLGEEILHLKSIYDANIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIGLFCTIPVTVAEAERSFSVLKRIKDVLRSTMSQHRLNDLGLLSIESEMAKKIDFQDVINFFARRKVRKATF 469

HSP 2 Score: 124.79 bits (312), Expect = 6.961e-30
Identity = 64/83 (77.11%), Postives = 71/83 (85.54%), Query Frame = 2 
Query: 1607 YIESFKFLVMAKIWYKVLQVINYRNIVLQARDATIDVEVANLSSLLDELQTIRDSWETLFNE-C------KLFGSFLEINTVF 1834
            Y+ESF+FLVMAKIWYKVLQ INYRNIVLQARDATIDVEVANLSSLLDELQTIRDSWETLFNE C      + F +  EI+++F
Sbjct:  238 YMESFEFLVMAKIWYKVLQAINYRNIVLQARDATIDVEVANLSSLLDELQTIRDSWETLFNEYCIIGNITRRFNAAKEIDSLF 320
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Planmine SMEST
Match: SMESG000058689.1 (SMESG000058689.1)

HSP 1 Score: 163.31 bits (412), Expect = 3.657e-42
Identity = 102/110 (92.73%), Postives = 105/110 (95.45%), Query Frame = 3 
Query: 1149 MSQRYKSGCXXXXXXXXXXXXNDRGRRTLENLGFITLSKSQQDEKQNPSESINAKESDGIPTLSLSTYVADPSSSRTEETTFPLSEESANCXXXXXXXXXXXDVNLLNID 1478
            MSQRYKSGCEKRKER KKLE+N RGRR LENLGFITLSKSQQDEKQNPSESINAKESDGIPTLSLSTYVADP SSRTEETTFPLSEESANCEM+E STSESMD+NLLNID
Sbjct:    1 MSQRYKSGCEKRKERQKKLEKNARGRRALENLGFITLSKSQQDEKQNPSESINAKESDGIPTLSLSTYVADPLSSRTEETTFPLSEESANCEMKEASTSESMDLNLLNID 110
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Planmine SMEST
Match: SMESG000023051.1 (SMESG000023051.1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.593e-21
Identity = 58/168 (34.52%), Postives = 98/168 (58.33%), Query Frame = 3 
Query: 1881 LDCIIGNIKRRFNTAKEIDSLFNVLWLFHNLNDEEIHTKSNKLQKVYENDIDDNLGEEILHLKSIYDTNIQNKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRK 2384
            + C+   +K+R    + I   F  L        + I   +  L ++Y+ND+D++  EE +HL S    N  +++ S +EL  +I   KL+ +FPNI I +R++    +++  AE SFS+LKR+K+ LR T+ + RLN L +LSIE++    ID+ D+I+ FA +K R+
Sbjct:  107 ISCLSEELKKRLEEYELIYKNFEFLKNLTKYQPKLILENAENLYQIYKNDLDESFMEECVHLGSYLKVNEISEN-SILELSKLIYSKKLETVFPNINIILRIYLCTRLSICSAERSFSLLKRLKNYLRFTIKEQRLNTLAILSIETDFTSNIDYSDIIDDFADKKSRR 273
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Planmine SMEST
Match: SMESG000048892.1 (SMESG000048892.1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.232e-21
Identity = 43/83 (51.81%), Postives = 61/83 (73.49%), Query Frame = 3 
Query: 2145 LDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRKATF 2393
            L  LFPN++I+IR+F T+PVTVA  + SFS LK IK+  RST+ Q RL+DL ++SIE E+++ ID  +++  FA +K RKA F
Sbjct:   57 LTYLFPNLVISIRIFLTLPVTVASGKKSFSKLKIIKNYPRSTIRQERLSDLSIISIEKELSENIDVSNIVKTFALKKARKANF 139
[Close]
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Planmine SMEST
Match: SMESG000065085.1 (SMESG000065085.1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.916e-18
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 3 
Query: 2094 NKSLSPIELLNIIKKMKLDVLFPNIIIAIRLFCTIPVTVAEAELSFSVLKRIKDVLRSTMSQHRLNDLEMLSIESEMAKKIDFQDLINLFARRKVRKATF 2393
            +K +SP ++   I + KL    PN+++++R+  T+PV+V   E SFS LK IK  LRSTMSQ RL D   +SIE + A  ++ ++L+  FAR+K RK  F
Sbjct:   98 SKPMSPSDVFLYIVQQKLKDCIPNLVVSLRILLTLPVSVDSGERSFSRLKLIKSYLRSTMSQSRLVDSATISIECDYASTLELKELVETFARKKARKIKF 197
The following BLAST results are available for this feature:
BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
si:ch211-240b21.27.083e-1239.00si:ch211-240b21.2 [Source:ZFIN;Acc:ZDB-GENE-060526... [more]
CR762475.12.996e-927.59pep chromosome:GRCz11:4:55494751:55498830:1 gene:E... [more]
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BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ENSXETT00000043220.11.280e-2053.13pep primary_assembly:Xenopus_tropicalis_v9.1:7:364... [more]
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BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Dimer_Tnp_hAT domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Dimer_Tnp_hAT domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A3B1IJ481.223e-4543.86Uncharacterized protein OS=Astyanax mexicanus OX=7... [more]
A0A2S2Q7V01.626e-4446.70Zinc finger MYM-type protein 1 (Fragment) OS=Sipha... [more]
A0A3B3SZZ12.470e-4144.44Uncharacterized protein OS=Paramormyrops kingsleya... [more]
H3BBS42.559e-3746.75Uncharacterized protein OS=Latimeria chalumnae OX=... [more]
H3BBS53.112e-3347.77Dimer_Tnp_hAT domain-containing protein OS=Latimer... [more]
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BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSAMXT00000033195.17.736e-4943.86pep primary_assembly:Astyanax_mexicanus-2.0:16:112... [more]
ENSAMXT00000042715.19.163e-2837.50pep primary_assembly:Astyanax_mexicanus-2.0:16:118... [more]
ENSAMXT00000035531.12.699e-2737.50pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ENSAMXT00000036272.15.073e-2536.72pep primary_assembly:Astyanax_mexicanus-2.0:20:119... [more]
ENSAMXT00000055782.14.890e-2035.43pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
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BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO405961.876e-1233.33Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO406622.096e-1233.33Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO322473.407e-828.91Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO351487.379e-828.13Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO336871.323e-735.00Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Dimer_Tnp_hAT domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 4
Match NameE-valueIdentityDescription
ENSORLT00000028133.16.048e-2336.99zinc finger MYM-type protein 1-like [Source:NCBI g... [more]
ENSORLT00000042294.16.048e-2336.99zinc finger MYM-type protein 1-like [Source:NCBI g... [more]
ENSORLT00000045044.16.048e-2336.99zinc finger MYM-type protein 1-like [Source:NCBI g... [more]
ENSORLT00000027735.16.332e-946.67pep primary_assembly:ASM223467v1:9:30712608:307152... [more]
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BLAST of Dimer_Tnp_hAT domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000060573.14.305e-10094.08SMESG000060573.1[more]
SMESG000058689.13.657e-4292.73SMESG000058689.1[more]
SMESG000023051.11.593e-2134.52SMESG000023051.1[more]
SMESG000048892.17.232e-2151.81SMESG000048892.1[more]
SMESG000065085.11.916e-1843.00SMESG000065085.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30017174 ID=SMED30017174|Name=Dimer_Tnp_hAT domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=2831bp
CGTCAGTATGTTGTGAGATTTTTTGAAAGTTGTAAATAATAATATTTAAA
CAAATTTATGACAGCTATGAAGTCTAACGGTCTCTTAGTTTTACACACAC
ACACGAGCTATCAACTGAGTGTGTGTAATTGTCATTTTATAATTATAAAA
TATGTTAGTAATGGCTGGAAAAAAATTCCAAGTAAAACGATAAATCGATG
TTAAAATCATCATTATTTAGTTATTTTTCAATTATTTGTATCTGAGATAA
AATGTATAACTCTTTGTCTATAATATTCCCAGGAATAAAGTTAAGACCGT
ACCAGTAAATCCTTTTCAATTAACTACTCAAGCTTGGGTTTCATTTATTA
ATTGTACATTTGATACAGAATCCATTCAGGAGTGGATGGGCGTTATGTTC
AACGCATTTAACGATAATAGTTAATAGCGTGTGTGCAGGCCCGACAAGAG
AGGGGGTTGACGGGGAAAATACCCGGGGCCCCGGGAAAAAATGTAGCCCA
ACGCTAACGTAAGTGAATTTAAATATTTTTAATATTGTGGGTTTGTTGTG
CGCAATTAACCAATCCTGTGATGTTTTAAACAGTAATTGGTTTATTCTTA
ATTCAATCCGTTTCAATCTTTACATCGACAATCTTAAACTCTTAATTCAA
TCTGTTTCAATCTTTACATAAATTTTAAAATCTTAAATCGTGTGGATCGC
GTGACTTAAAAAGCGACTGTCGCAGTTGCCAAGGGCATCGTCGCACTTTG
GGGGGATACGTCCCGCTACTTCTTTCCTGCATGCCGGTGCATGCGGACGC
GAACTTCGGTCAGCTTACGTCGCACAACTGGCCACGCAGTGGTGTCCATA
ACGTCGATCGCGATCGACCGGTCGCTCGCGAAGCCTTTAAACTTTAAACC
TTTAAATGAAATAAATATGTGGGAAGAAGAATAAGATTTTTTTTCGTCTT
CACATTTAGTCGATCTTGGCAAGACATTTTTATAATCGATCTTCAAAAAG
TCGATCGGTCAAAAATTAGTGGACACCACTGATTTATATGATTGAAACGT
GAAACGTGTCGACCTTATTAGCAAAGCGATAATTTGCTTAATAACATGCA
GCATCATTAAAAAAATTAATAAATGATATTAATTTATGGACAGGGATAAT
GAGTCAGCGTTATAAATCCGGATGCGAAAAGCGTAAAGAACGACATAAGA
AGCTTGAAGAAAATGATAGAGGAAGAAGAACATTGGAAAATTTGGGTTTC
ATAACTTTATCAAAATCCCAACAAGATGAAAAACAAAACCCTTCCGAATC
AATAAATGCAAAGGAATCTGATGGAATTCCTACACTTTCCTTGTCTACGT
ATGTTGCGGATCCTTCAAGTTCAAGAACCGAAGAAACAACATTTCCCTTG
TCTGAAGAATCAGCCAACTGTGAAATGGAAGAAACATCCACCAGTGAATC
TATGGATGTGAATTTACTAAACATCGACATTGGATTGTTGAAATTAAATT
AAATGAGAAAGGATGTAGAAGAGGCTATTCAACGAGGTCCAGAATCACAT
CCAGCAACATTTCCTGTTGATAAACAGGGCAATCAATTTCCAGTAAATTT
GTTATATATATTGAATCGTTTAAATTCTTAGTAATGGCTAAAATTTGGTA
CAAAGTCCTTCAAGTTATAAATTATAGAAATATTGTTTTACAAGCTCGTG
ATGCGACAATTGATGTAGAAGTAGCGAATTTGTCAAGTCTTCTTGATGAA
TTACAAACAATAAGAGATAGTTGGGAAACTCTCTTCAATGAATGTAAATT
GTTTGGTTCATTTTTAGAGATAAATACAGTTTTTGAAACAAAACGTAGTA
AAAGGAAAAAATGGGGGAACGAATTAGAAATTAGATTGTATTATTGGAAA
TATTAAGAGAAGATTTAATACGGCTAAAGAAATTGATTCGTTATTCAATG
TATTATGGTTATTTCATAACCTTAATGATGAAGAAATACACACGAAGTCC
AACAAATTACAAAAAGTATATGAAAATGATATTGACGATAATCTTGGTGA
AGAAATACTCCATTTGAAATCAATTTATGATACCAATATACAAAACAAAT
CTCTCTCGCCCATTGAGTTACTAAACATCATTAAAAAAATGAAACTGGAT
GTATTGTTTCCCAACATAATAATAGCAATAAGATTATTTTGTACGATCCC
TGTAACCGTTGCTGAAGCAGAACTATCCTTTAGTGTTTTAAAAAGGATAA
AAGATGTTTTGAGATCCACAATGTCACAACACCGATTAAATGATTTAGAA
ATGTTGTCAATTGAATCTGAAATGGCTAAGAAAATTGATTTTCAAGACTT
AATTAATTTGTTTGCTAGGCGCAAGGTTCGGAAAGCAACATTTTAAAAAA
TAATTTGTTTTTTGTACTTTTTTTTGTAATTTTAGTTGTAAACGTTTTCA
TTTTTGTAAGAGAATTATTAATGAATACATTGTTCCAATAACAATTAGGA
TATTTTGCGGTTTCCCGCTTCATTTATAAATGGCCCAAAGTCCGAGGGGA
AATTTTTTTTCACGCTCTTGGCAGGGGCCCCCACAAGAAGTATATCCCCG
GGGCCCCAGAAGTTATCTCCGCGGCCCTGCATACGACACATGGGAAATCA
TCGCAATACACATCACAGATTTCCTTTTTTCTGTGCAGTCCTTTTCTCTT
TCCCGAAGTAAACAACATAAGGTGAAGTAAATGCTCCTTTTGTTCCAATA
TTTAATTTGTTTGTAATTTTTGAAAAATACGAATTTTAGGAAATGTATAA
TTAAAACTGATTTAGATAAACAACAGCAAAC
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protein sequence of SMED30017174-orf-1

>SMED30017174-orf-1 ID=SMED30017174-orf-1|Name=SMED30017174-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=118bp
MSQRYKSGCEKRKERHKKLEENDRGRRTLENLGFITLSKSQQDEKQNPSE
SINAKESDGIPTLSLSTYVADPSSSRTEETTFPLSEESANCEMEETSTSE
SMDVNLLNIDIGLLKLN*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000070intestinal phagocyte
PLANA:0002089reproductive organ
Vocabulary: molecular function
TermDefinition
GO:0046983protein dimerization activity
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom