Innexin

Overview
NameInnexin
Smed IDSMED30017164
Length (bp)2630
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Innexin (SMED30017164) t-SNE clustered cells

Violin plots show distribution of expression levels for Innexin (SMED30017164) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Innexin (SMED30017164) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Innexin (SMED30017164) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30017164

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
parenchymaSMED30017164SMESG000031896.1 AY067506smed_ncbi_20200123PMID:17670787
Oviedo et al., 2007		whole organism asexual adult colorimetric in situ hybridization evidence
Category 2 cellSMED30017164SMESG000031896.1 SMESG000031895.1 dd_Smed_v4_15239_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Innexin vs. Ensembl Celegans
Match: inx-1 (Innexin [Source:UniProtKB/TrEMBL;Acc:Q17394])

HSP 1 Score: 127.102 bits (318), Expect = 2.775e-31
Identity = 66/196 (33.67%), Postives = 115/196 (58.67%), Query Frame = 3 
Query: 1800 VSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYN 2387
            V KR    +T+ Y+ +K LYL N  LQ++++  FLG     +N  +G +I+ ++L+G++W+ S  FPRV  C   V+    ++    QCVL +NM NE++++FLW W  +   ++ VS+  WI   +   Q   F +K+L   ++ ++   +      F  +FL +DG+F ++MIS +AGDI+A +++V LW  +N
Sbjct:  180 VQKRWANYVTLLYVFIKMLYLGNVVLQVFMLNSFLG----TDNLFYGFHILRDLLNGREWEVSGNFPRVTMCDFEVRVLGNVHHHTVQCVLMINMFNEKIFLFLWFWYFMVAFVSAVSMFHWIIISFLPGQHMKFIRKYLRATDLATDRQSVKK----FVHKFLGYDGVFCMRMISAHAGDILATELIVALWHNFN 367
[Close]
BLAST of Innexin vs. Ensembl Celegans
Match: inx-1 (Innexin [Source:UniProtKB/TrEMBL;Acc:Q17394])

HSP 1 Score: 127.102 bits (318), Expect = 2.775e-31
Identity = 66/196 (33.67%), Postives = 115/196 (58.67%), Query Frame = 3 
Query: 1800 VSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYN 2387
            V KR    +T+ Y+ +K LYL N  LQ++++  FLG     +N  +G +I+ ++L+G++W+ S  FPRV  C   V+    ++    QCVL +NM NE++++FLW W  +   ++ VS+  WI   +   Q   F +K+L   ++ ++   +      F  +FL +DG+F ++MIS +AGDI+A +++V LW  +N
Sbjct:  180 VQKRWANYVTLLYVFIKMLYLGNVVLQVFMLNSFLG----TDNLFYGFHILRDLLNGREWEVSGNFPRVTMCDFEVRVLGNVHHHTVQCVLMINMFNEKIFLFLWFWYFMVAFVSAVSMFHWIIISFLPGQHMKFIRKYLRATDLATDRQSVKK----FVHKFLGYDGVFCMRMISAHAGDILATELIVALWHNFN 367
[Close]
BLAST of Innexin vs. Ensembl Celegans
Match: inx-18 (Innexin [Source:UniProtKB/TrEMBL;Acc:Q8MXG8])

HSP 1 Score: 127.872 bits (320), Expect = 2.909e-31
Identity = 76/216 (35.19%), Postives = 121/216 (56.02%), Query Frame = 3 
Query: 1737 YRKDALANFRKTVYRFCNFFIVSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIY 2384
            Y++D  A  R +VY F   F + K  G  ++  YI +K L+L N  LQ  L+  FL  SD     +FG +++ ++  G++W+DS  FPRV  C   ++    ++    QCVL +NML E+++IFLW W+ V  I+T ++LI W   + S+  +  F  K L I+          D +  F   FLR DG+FLL+MI+ ++G+++AA +   LW I+
Sbjct:  173 YQRDHGAR-RHSVYIFA-IFKLGKFYGAYVSSVYIFIKALHLANVILQFMLLNSFLQTSDY---PMFGAHVLYDLFMGREWRDSGKFPRVTLCDFEIRVLGNVHRHTVQCVLVINMLTEKIFIFLWLWLTVLAIVTALNLIFWFIALVSNSCREHFVSKHLDIQS---------DQISRFVHRFLRADGVFLLQMIASHSGNLMAAKVTEQLWMIF 374
[Close]
BLAST of Innexin vs. Ensembl Celegans
Match: inx-18 (Innexin [Source:UniProtKB/TrEMBL;Acc:Q8MXG8])

HSP 1 Score: 127.872 bits (320), Expect = 2.909e-31
Identity = 76/216 (35.19%), Postives = 121/216 (56.02%), Query Frame = 3 
Query: 1737 YRKDALANFRKTVYRFCNFFIVSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIY 2384
            Y++D  A  R +VY F   F + K  G  ++  YI +K L+L N  LQ  L+  FL  SD     +FG +++ ++  G++W+DS  FPRV  C   ++    ++    QCVL +NML E+++IFLW W+ V  I+T ++LI W   + S+  +  F  K L I+          D +  F   FLR DG+FLL+MI+ ++G+++AA +   LW I+
Sbjct:  173 YQRDHGAR-RHSVYIFA-IFKLGKFYGAYVSSVYIFIKALHLANVILQFMLLNSFLQTSDY---PMFGAHVLYDLFMGREWRDSGKFPRVTLCDFEIRVLGNVHRHTVQCVLVINMLTEKIFIFLWLWLTVLAIVTALNLIFWFIALVSNSCREHFVSKHLDIQS---------DQISRFVHRFLRADGVFLLQMIASHSGNLMAAKVTEQLWMIF 374
[Close]
BLAST of Innexin vs. Ensembl Celegans
Match: inx-18 (Innexin [Source:UniProtKB/TrEMBL;Acc:Q8MXG8])

HSP 1 Score: 127.872 bits (320), Expect = 3.586e-31
Identity = 76/216 (35.19%), Postives = 121/216 (56.02%), Query Frame = 3 
Query: 1737 YRKDALANFRKTVYRFCNFFIVSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIY 2384
            Y++D  A  R +VY F   F + K  G  ++  YI +K L+L N  LQ  L+  FL  SD     +FG +++ ++  G++W+DS  FPRV  C   ++    ++    QCVL +NML E+++IFLW W+ V  I+T ++LI W   + S+  +  F  K L I+          D +  F   FLR DG+FLL+MI+ ++G+++AA +   LW I+
Sbjct:  173 YQRDHGAR-RHSVYIFA-IFKLGKFYGAYVSSVYIFIKALHLANVILQFMLLNSFLQTSDY---PMFGAHVLYDLFMGREWRDSGKFPRVTLCDFEIRVLGNVHRHTVQCVLVINMLTEKIFIFLWLWLTVLAIVTALNLIFWFIALVSNSCREHFVSKHLDIQS---------DQISRFVHRFLRADGVFLLQMIASHSGNLMAAKVTEQLWMIF 374
[Close]
BLAST of Innexin vs. Ensembl Fly
Match: shakB (gene:FBgn0085387 transcript:FBtr0112572)

HSP 1 Score: 57.7658 bits (138), Expect = 1.529e-8
Identity = 61/199 (30.65%), Postives = 98/199 (49.25%), Query Frame = 3 
Query: 1836 YILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGK-DWQDSMI--FPRVGFC-FVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSS-LQKPLFTKKFLLIK----EIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSR 2405
            Y + + L L N   Q++LM RF     +     FGL +I+ + + + D  D MI  FPR+  C F +      +    A C+LP+N++NE++YIFLW W ++   LT+++LI  +  I+S  ++  LF  +F L++    EII    K+ D               FLL ++  N   +I  D+V +L      NQ  R
Sbjct:  125 YYVCELLALINVIGQMFLMNRFF----DGEFITFGLKVIDYMETDQEDRMDPMIYIFPRMTKCTFFKYGSSGEVEKHDAICILPLNVVNEKIYIFLWFWFILLTFLTLLTLIYRVVIIFSPRMRVYLFRMRFRLVRRDAIEIIVRRSKMGD--------------WFLLYLLGENIDTVIFRDVVQDLANRLGHNQHHR 305
[Close]
BLAST of Innexin vs. Ensembl Fly
Match: shakB (gene:FBgn0085387 transcript:FBtr0309369)

HSP 1 Score: 58.151 bits (139), Expect = 1.772e-8
Identity = 61/199 (30.65%), Postives = 98/199 (49.25%), Query Frame = 3 
Query: 1836 YILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGK-DWQDSMI--FPRVGFC-FVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSS-LQKPLFTKKFLLIK----EIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSR 2405
            Y + + L L N   Q++LM RF     +     FGL +I+ + + + D  D MI  FPR+  C F +      +    A C+LP+N++NE++YIFLW W ++   LT+++LI  +  I+S  ++  LF  +F L++    EII    K+ D               FLL ++  N   +I  D+V +L      NQ  R
Sbjct:  186 YYVCELLALINVIGQMFLMNRFF----DGEFITFGLKVIDYMETDQEDRMDPMIYIFPRMTKCTFFKYGSSGEVEKHDAICILPLNVVNEKIYIFLWFWFILLTFLTLLTLIYRVVIIFSPRMRVYLFRMRFRLVRRDAIEIIVRRSKMGD--------------WFLLYLLGENIDTVIFRDVVQDLANRLGHNQHHR 366
[Close]
BLAST of Innexin vs. Ensembl Fly
Match: shakB (gene:FBgn0085387 transcript:FBtr0309370)

HSP 1 Score: 58.151 bits (139), Expect = 1.772e-8
Identity = 61/199 (30.65%), Postives = 98/199 (49.25%), Query Frame = 3 
Query: 1836 YILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGK-DWQDSMI--FPRVGFC-FVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSS-LQKPLFTKKFLLIK----EIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSR 2405
            Y + + L L N   Q++LM RF     +     FGL +I+ + + + D  D MI  FPR+  C F +      +    A C+LP+N++NE++YIFLW W ++   LT+++LI  +  I+S  ++  LF  +F L++    EII    K+ D               FLL ++  N   +I  D+V +L      NQ  R
Sbjct:  186 YYVCELLALINVIGQMFLMNRFF----DGEFITFGLKVIDYMETDQEDRMDPMIYIFPRMTKCTFFKYGSSGEVEKHDAICILPLNVVNEKIYIFLWFWFILLTFLTLLTLIYRVVIIFSPRMRVYLFRMRFRLVRRDAIEIIVRRSKMGD--------------WFLLYLLGENIDTVIFRDVVQDLANRLGHNQHHR 366
[Close]
BLAST of Innexin vs. Ensembl Fly
Match: shakB (gene:FBgn0085387 transcript:FBtr0342859)

HSP 1 Score: 58.151 bits (139), Expect = 1.772e-8
Identity = 61/199 (30.65%), Postives = 98/199 (49.25%), Query Frame = 3 
Query: 1836 YILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGK-DWQDSMI--FPRVGFC-FVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSS-LQKPLFTKKFLLIK----EIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSR 2405
            Y + + L L N   Q++LM RF     +     FGL +I+ + + + D  D MI  FPR+  C F +      +    A C+LP+N++NE++YIFLW W ++   LT+++LI  +  I+S  ++  LF  +F L++    EII    K+ D               FLL ++  N   +I  D+V +L      NQ  R
Sbjct:  186 YYVCELLALINVIGQMFLMNRFF----DGEFITFGLKVIDYMETDQEDRMDPMIYIFPRMTKCTFFKYGSSGEVEKHDAICILPLNVVNEKIYIFLWFWFILLTFLTLLTLIYRVVIIFSPRMRVYLFRMRFRLVRRDAIEIIVRRSKMGD--------------WFLLYLLGENIDTVIFRDVVQDLANRLGHNQHHR 366
[Close]
BLAST of Innexin vs. Ensembl Fly
Match: shakB (gene:FBgn0085387 transcript:FBtr0112570)

HSP 1 Score: 57.7658 bits (138), Expect = 1.907e-8
Identity = 61/199 (30.65%), Postives = 98/199 (49.25%), Query Frame = 3 
Query: 1836 YILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGK-DWQDSMI--FPRVGFC-FVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSS-LQKPLFTKKFLLIK----EIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSR 2405
            Y + + L L N   Q++LM RF     +     FGL +I+ + + + D  D MI  FPR+  C F +      +    A C+LP+N++NE++YIFLW W ++   LT+++LI  +  I+S  ++  LF  +F L++    EII    K+ D               FLL ++  N   +I  D+V +L      NQ  R
Sbjct:  170 YYVCELLALINVIGQMFLMNRFF----DGEFITFGLKVIDYMETDQEDRMDPMIYIFPRMTKCTFFKYGSSGEVEKHDAICILPLNVVNEKIYIFLWFWFILLTFLTLLTLIYRVVIIFSPRMRVYLFRMRFRLVRRDAIEIIVRRSKMGD--------------WFLLYLLGENIDTVIFRDVVQDLANRLGHNQHHR 350
[Close]
BLAST of Innexin vs. UniProt/SwissProt
Match: sp|Q03412|UNC7_CAEEL (Innexin unc-7 OS=Caenorhabditis elegans OX=6239 GN=unc-7 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.646e-28
Identity = 63/196 (32.14%), Postives = 112/196 (57.14%), Query Frame = 3 
Query: 1803 SKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDD-NLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYN 2387
             +  G  +T+ YI +K LY  N  LQ +L+   LG     N+  +G +++ +++   +W+ + +FPRV  C   V+    ++    QCVL +NM NE++++FLW W L   I+T+ + + WI  ++   Q   F +K+L +          DD  L  F   FLR DG+F+L+MIS +AG+++++++++ LWQ +N
Sbjct:  311 GRHCGCYVTMLYIGIKVLYSANVLLQFFLLNHLLG----SNDLAYGFSLLKDLMHAIEWEQTGMFPRVTLCDFEVRVLGNIHRHTVQCVLMINMFNEKIFLFLWFWFLTCGIVTVCNTMYWILIMFIPSQGMSFVRKYLRVLPDHPAKPIADDVTLRKFTNNFLRKDGVFMLRMISTHAGELMSSELILALWQDFN 502
[Close]
BLAST of Innexin vs. UniProt/SwissProt
Match: sp|O01393|UNC9_CAEEL (Innexin unc-9 OS=Caenorhabditis elegans OX=6239 GN=unc-9 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.016e-27
Identity = 67/209 (32.06%), Postives = 112/209 (53.59%), Query Frame = 3 
Query: 1779 RFCNFFIVSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSR 2405
            +  N  I ++  G  +T  YI +K LY  N   Q++L+  FLG      +  +GL ++N++++G++W++S  FPRV  C   VK    ++    QCVL +NM NE++++FLW W  +    T+ SL  WI+      ++  F  K+L   E     D    +L  F   FLR DG+FLL+M++ +AG++   ++   LW  Y  N+  +
Sbjct:  180 KLLNLIICTRSSGAAVTFLYISVKILYTVNIVGQIFLLNTFLG----NRSKWYGLQVLNDLMNGREWEESGHFPRVTLCDFEVKVLGNVHRHTVQCVLMINMFNEKIFLFLWFWYFLLAGATLCSLFYWIYISVVPSRQLNFVGKYLTGIEGYKMVD--SQSLRRFVFHFLRQDGVFLLRMVATHAGELPCYELAKTLWNNYCDNKEGK 382
[Close]
BLAST of Innexin vs. UniProt/SwissProt
Match: sp|Q27295|EAT5_CAEEL (Innexin eat-5 OS=Caenorhabditis elegans OX=6239 GN=eat-5 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.969e-27
Identity = 69/205 (33.66%), Postives = 113/205 (55.12%), Query Frame = 3 
Query: 1797 IVSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFER--------EFLRH----DGLFLLKMISINAGDIIAADIVVNLW 2375
            I   + G  IT  Y++ K +Y+TNSFLQ Y   +FLG    QN+  +G+ I+++IL G DW+ S  FPR+  C  +V+    +     QCVL +NM NE++++FL+ W L+   +T+   I   + ++SS +   F ++FL  ++   ND+K  +    + +        EF  H    D + LLKMI+ + GDI+  +IV  +W
Sbjct:  181 IFGMQHGKYITNVYLVTKLIYMTNSFLQFYSTNKFLG----QNDPYWGMRILDDILKGTDWEHSGNFPRIAMCDFQVRVLGNLQRYSIQCVLTLNMFNEKIFLFLYIWFLLVFFVTLFDSIFLCYNMFSSHKLVEFLQQFLDNQDQDENDEKKPEERKVYRKEQHSILLSEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMW 381
[Close]
BLAST of Innexin vs. UniProt/SwissProt
Match: sp|A8WVX4|INX19_CAEBR (Innexin-19 OS=Caenorhabditis briggsae OX=6238 GN=inx-19 PE=3 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 2.604e-25
Identity = 69/220 (31.36%), Postives = 113/220 (51.36%), Query Frame = 3 
Query: 1815 GTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKE---------------------IISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSRKF 2411
            G  I+I Y   K LY  N   Q +++   L  S+      FG  ++++I +G+ W ++  FPRV  C   V++ + +N    QC L +N++NE+++ FLWCW ++  I+T  S I WI   +   +K  +  KF+ I E                     +I+    L D+ V+   +FL+ DG+ +L+MIS +AGD+I   +V NLWQ Y    + R+F
Sbjct:  194 GQCISIVYSFTKLLYSVNVVAQFFILNACLKSSEF---VFFGFQVLSDIWAGRPWTETGHFPRVTLCDFEVRYLANLNRYTVQCALLINIINEKVFAFLWCWYMILAIITTCSFIYWIANSFIHSEKVDYVMKFIQIAESSEYKKLQKFEKDATVERLYTVIAFAPHLLDSFVS---DFLKSDGILMLRMISNHAGDMIVVQLVRNLWQEYRERNW-REF 406
[Close]
BLAST of Innexin vs. UniProt/SwissProt
Match: sp|Q23157|INX11_CAEEL (Innexin-11 OS=Caenorhabditis elegans OX=6239 GN=inx-11 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 6.741e-25
Identity = 62/192 (32.29%), Postives = 104/192 (54.17%), Query Frame = 3 
Query: 1836 YILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIIS--------NDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYN 2387
            Y+  K LY  N F QLYLM  FLG      +  +G  ++ +I+ G+ W+ S  FPR   C   V+  + +     QCVL +N+ NE++++ LW W ++ ++ + VSL+ W    +  L  P F+K F+     +S        N  + D ++  F  ++L  DG+F+L+M+S +AG I A D+V  L++ Y+
Sbjct:  202 YLFTKVLYFLNVFAQLYLMNYFLG---TNRHHWYGFGVVQDIVQGEPWERSGYFPRAAVCDFEVRQVANIQRYSVQCVLVINIFNEKIFVLLWFWYVILLLSSTVSLVQW----FIVLVFPCFSKWFVKQHLALSTLQNFNQRNSRREDSDVSKFVTQYLHKDGVFVLRMVSSHAGIIFATDLVQALYEAYD 386
[Close]
BLAST of Innexin vs. TrEMBL
Match: A0A448WMM2 (Innexin OS=Protopolystoma xenopodis OX=117903 GN=inx PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 9.508e-69
Identity = 111/229 (48.47%), Postives = 159/229 (69.43%), Query Frame = 3 
Query: 1725 QHREYRKDALANFRKTVYRFCNFFIVSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSRKF 2411
            Q REYR    A  R+  Y++C+ F VSKR+G R+   Y+ +K LY+ N+  QL+LMQ FLG  +N N ++FG+ ++NN+LSG DWQ +MIFPRV FC   + H SG N +V QCVLPVNMLNER+++FLW WIL+  I+T +S+ +W +RI+    +  F K+FL + E ++  DK    +  F R+FLRHDG+FLL+MIS+NAG+++A++IV  LW IY    ++R F
Sbjct:    3 QRREYRTGKFAQVRRNAYKWCSMFAVSKRLGNRLAYTYLFIKLLYVFNAISQLFLMQAFLGLRNNSNYTIFGVAVLNNMLSGHDWQTTMIFPRVCFCRAPLLHLSGWNNIVTQCVLPVNMLNERIFVFLWFWILLAAIITTISVPIWFFRIHYEKSRTSFVKRFLKLGEQLTKKDKC--MVEKFSRQFLRHDGVFLLRMISMNAGELVASEIVCQLWTIYKLKYYNRDF 229
[Close]
BLAST of Innexin vs. TrEMBL
Match: A0A2H1CKS1 (Innexin OS=Fasciola hepatica OX=6192 GN=inx PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 1.042e-66
Identity = 108/227 (47.58%), Postives = 160/227 (70.48%), Query Frame = 3 
Query: 1725 QHREYRKDALANFRKTVYRFCNFFIVSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSR 2405
            QHREYR    +  R+ +++FC+  ++SKR+GTR+   Y+L+K LYL N   QL +M+RFLG  + +N ++FGL I ++IL GKDW+ +++FPRVG+C + V+H    N V +QCVLPVNMLNER+Y+FLW WI++   LT +S+  W  R+     +  F K++L + E++S  D++   +  F+R+FLRHDG+FLLKMIS+NAGD+I ADIV  LW+++ S  F R
Sbjct:   15 QHREYRVGRFSELRRRIWKFCSLLVISKRLGTRLFATYMLVKSLYLINGVGQLVMMERFLGL-NRRNYTMFGLAIAHDILMGKDWEVTLVFPRVGYCLIPVRHMGSRNYVTSQCVLPVNMLNERIYVFLWFWIVLACTLTAISIPTWFVRMSYQKSRTCFIKRYLKLGEVLSRKDRV--MVEKFKRQFLRHDGIFLLKMISLNAGDLICADIVCQLWKVFKSRYFFR 238
[Close]
BLAST of Innexin vs. TrEMBL
Match: A0A4S2LNY2 (Innexin OS=Opisthorchis felineus OX=147828 GN=inx PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 1.080e-63
Identity = 108/231 (46.75%), Postives = 159/231 (68.83%), Query Frame = 3 
Query: 1713 QVI*QHREYRKDALANFRKTVYRFCNFFIVSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSR 2405
            Q++ QHREYR D  ++ R+ +++ C+  +VSKR+GTR+   Y+ +K LYL N+  Q+++MQ FLG   + N S FG+ I  +ILSGKDWQ +++FPRVG+C V V+H    N V  QCVLPVNMLNER+Y+FLW WI++   LT +S+  W  R+     +  F KK+L + E+++  D+    +  F+R+FLR DG+FLL+MI+INAGD+I +DIV  LW+I+ +  F R
Sbjct:  171 QMLFQHREYRNDVWSHIRRRLWKTCSLLVVSKRLGTRLFAIYLFIKCLYLVNAVGQVFMMQTFLGLRYD-NYSFFGIAIARDILSGKDWQRTLVFPRVGYCLVPVRHMGASNYVTGQCVLPVNMLNERIYVFLWFWIVLAATLTAISIPTWFMRMSYQKSRTCFIKKYLKLGEVLTKKDR--GMVEKFKRQFLRQDGIFLLRMIAINAGDLICSDIVCQLWKIFKTRYFFR 398
[Close]
BLAST of Innexin vs. TrEMBL
Match: G7YJJ0 (Innexin OS=Clonorchis sinensis OX=79923 GN=inx PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 1.349e-63
Identity = 108/231 (46.75%), Postives = 159/231 (68.83%), Query Frame = 3 
Query: 1713 QVI*QHREYRKDALANFRKTVYRFCNFFIVSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSR 2405
            Q++ QHREYR D  ++ R+ +++ C+  +VSKR+GTR+   Y+ +K LYL N+  Q+++MQ FLG   + N S FG+ I  +ILSGKDWQ +++FPRVG+C V V+H    N V  QCVLPVNMLNER+Y+FLW WI++   LT +S+  W  R+     +  F KK+L + E+++  D+    +  F+R+FLR DG+FLL+MI+INAGD+I +DIV  LW+I+ +  F R
Sbjct:  171 QMLFQHREYRNDVWSHIRRRLWKTCSLLVVSKRLGTRLFAIYLFIKCLYLVNAVGQVFMMQTFLGLRYD-NYSFFGIAIARDILSGKDWQRTLVFPRVGYCLVPVRHMGASNYVTGQCVLPVNMLNERIYVFLWFWIVLAATLTAISIPTWFMRMSYQKSRTCFIKKYLKLGEVLTKKDR--GMVEKFKRQFLRQDGIFLLRMIAINAGDLICSDIVCQLWKIFKTRYFFR 398
[Close]
BLAST of Innexin vs. TrEMBL
Match: A0A4E0S0S1 (Innexin OS=Fasciola hepatica OX=6192 GN=inx PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.576e-62
Identity = 108/227 (47.58%), Postives = 160/227 (70.48%), Query Frame = 3 
Query: 1725 QHREYRKDALANFRKTVYRFCNFFIVSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSR 2405
            QHREYR    +  R+ +++FC+  ++SKR+GTR+   Y+L+K LYL N   QL +M+RFLG  + +N ++FGL I ++IL GKDW+ +++FPRVG+C + V+H    N V +QCVLPVNMLNER+Y+FLW WI++   LT +S+  W  R+     +  F K++L + E++S  D++   +  F+R+FLRHDG+FLLKMIS+NAGD+I ADIV  LW+++ S  F R
Sbjct:  461 QHREYRVGRFSELRRRIWKFCSLLVISKRLGTRLFATYMLVKSLYLINGVGQLVMMERFLGL-NRRNYTMFGLAIAHDILMGKDWEVTLVFPRVGYCLIPVRHMGSRNYVTSQCVLPVNMLNERIYVFLWFWIVLACTLTAISIPTWFVRMSYQKSRTCFIKRYLKLGEVLSRKDRV--MVEKFKRQFLRHDGIFLLKMISLNAGDLICADIVCQLWKVFKSRYFFR 684

HSP 2 Score: 180.259 bits (456), Expect = 1.785e-43
Identity = 91/201 (45.27%), Postives = 126/201 (62.69%), Query Frame = 3 
Query: 1806 KRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKH-WSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLV-AFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFS 2402
            +  GT +++ Y+ LK LYL N+  QL+LMQ FLGF        FG+ ++ NI++G DW+ +++FPRV +C+  VKH  +  NT  AQCVLPVNMLNE++YIFLW WI+    LT  SL  W  R+ S      F  K+L + E   + D  D  L+  F R FLRHDG+FLLKM+S NAG++I +D++  +W  Y   Q S
Sbjct:   98 RHRGTFLSVAYMFLKLLYLANAIGQLFLMQYFLGFQGGDATYGFGITVLQNIMNGHDWEATLVFPRVAYCYAPVKHLGTRTNTATAQCVLPVNMLNEKIYIFLWWWIVFVATLTAFSLFRWSIRMLSRTGPVDFVTKYLTLGE---HYDPCDCELLQEFVRHFLRHDGVFLLKMLSYNAGELITSDVLALVWSAYREKQMS 295
[Close]
BLAST of Innexin vs. Planmine SMEST
Match: SMESG000031896.1 (SMESG000031896.1)

HSP 1 Score: 483.411 bits (1243), Expect = 3.974e-165
Identity = 256/259 (98.84%), Postives = 256/259 (98.84%), Query Frame = 3 
Query: 1713 QVI*QHREYRKDALANFRKTVYRFCNFFIVSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSRKFXXXXXXXXXXXXXXXRNLINSFINFH 2489
            Q   QHREYRKDALANFRKTVYRFCNFFIVSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSRKFSDSSNHSDLSSHGTSRNLINSFINFH
Sbjct:   52 QTCYQHREYRKDALANFRKTVYRFCNFFIVSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSRKFSDSSNHSDLSSHGTSRNLINSFINFH 310
[Close]
BLAST of Innexin vs. Planmine SMEST
Match: SMESG000065083.1 (SMESG000065083.1)

HSP 1 Score: 248.054 bits (632), Expect = 2.426e-73
Identity = 122/233 (52.36%), Postives = 166/233 (71.24%), Query Frame = 3 
Query: 1713 QVI*QHREYRKDALANFRKTVYRFCNFFIVSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSRKF 2411
            Q++ QHR++R   LA FR+ ++    F + SKR+GT +   Y+LLK  Y+ N F+QL +MQ+FLGFSD  N   FG+ + NNI SG DW+ ++IFPRV +CFV+V H   +N++VAQCVLPVNMLNER+Y FLWCWIL+ + LTI+S+ +WI RI     +  F ++FL+I E I+ D K +  L  FE +FLRHDG+FLLKMIS+NAGDII ++IV  LW IY +N  +R F
Sbjct:  171 QLLYQHRDHRSGKLAKFRRKIHNSVGFLMCSKRIGTWLVSSYLLLKLSYVANGFIQLIIMQKFLGFSDF-NLLTFGIEVGNNIWSGTDWKTTLIFPRVSYCFVKVTHLGVINSMVAQCVLPVNMLNERIYFFLWCWILIVLSLTILSIPIWILRILCIKYRRHFIRQFLIISEEITKDQKENYLLAKFESQFLRHDGIFLLKMISLNAGDIITSEIVCQLWNIYKTNYVNRNF 402
[Close]
BLAST of Innexin vs. Planmine SMEST
Match: SMESG000070656.1 (SMESG000070656.1)

HSP 1 Score: 240.736 bits (613), Expect = 6.547e-71
Identity = 116/233 (49.79%), Postives = 164/233 (70.39%), Query Frame = 3 
Query: 1713 QVI*QHREYRKDALANFRKTVYRFCNFFIVSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSRKF 2411
            Q++ QHR+ R   LA FR+++Y+ C F I+SKR GTR+   Y ++KFLYLTN  LQLY M+ FLG   N+    FG  I+ NI++G+DW+ +++FPRVG+C+V VK+    N +VAQCVLPVNMLNE+++ FLWCWI    IL  +S+I+WI+R     ++  F  +FL + + + N D+    +V FE +FLR+DG+FLLKMIS+NAGDI+AADIV  LW+I+ S   +R F
Sbjct:  125 QMLYQHRDNRNGRLARFRRSLYKICCFCIMSKRQGTRLLCMYFIIKFLYLTNCILQLYFMKCFLGL--NEAGIFFGFKIMKNIINGQDWKSTLVFPRVGYCYVNVKNVGTTNALVAQCVLPVNMLNEKIFFFLWCWIFSSAILLTISIIIWIFRTSVYQRRRGFIYRFLKLNQQLKNCDEEKCMVVKFEHQFLRYDGVFLLKMISLNAGDIVAADIVCQLWKIFKSQYANRNF 355
[Close]
BLAST of Innexin vs. Planmine SMEST
Match: SMESG000080788.1 (SMESG000080788.1)

HSP 1 Score: 210.69 bits (535), Expect = 8.256e-60
Identity = 107/224 (47.77%), Postives = 152/224 (67.86%), Query Frame = 3 
Query: 1725 QHREYRKDALANFRKTVYRFCNFFIVSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCFVR-VKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSN 2393
            QHR+YR+   A  R+ +Y  CNF + SK MGT + + YIL+KFLY  N   QL++M++FLGF  N + S FG  +++N++SGK+W  + IFPRV +C+VR +KH    N  VAQC LPVNMLNE++Y+FLW W+++  I+T +S+ LW +R+    ++  F K+FL++ +     DK   N   F  EFLRHDG+FL++M+ INAGDII ADIV  L +IY  N
Sbjct:  176 QHRDYRQGNFAKLRRKIYNTCNFCVFSKHMGTWLILSYILIKFLYGLNVIGQLFIMKKFLGF--NNSTSSFGYTVLSNMISGKEWHQTGIFPRVTYCYVRNIKHVGVANKYVAQCALPVNMLNEKIYVFLWFWMVLVGIVTAISIPLWFYRMAFLSRRSKFIKRFLMMHQNYERSDKPMIN--NFIEEFLRHDGVFLVRMLFINAGDIITADIVNRLLEIYKEN 395
[Close]
BLAST of Innexin vs. Planmine SMEST
Match: SMESG000080705.1 (SMESG000080705.1)

HSP 1 Score: 193.741 bits (491), Expect = 6.245e-56
Identity = 98/221 (44.34%), Postives = 145/221 (65.61%), Query Frame = 3 
Query: 1752 LANFRKTVYRFCNFFIVSKRMGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNILSGKDWQDSMIFPRVGFCF-VRVKHWSGMNTVVAQCVLPVNMLNERLYIFLWCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDDNLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSRKF 2411
            +A  R+ +Y +CNF + SK +GT +   Y  +K LY  N   QLYLM+ FLGF  N + S FG  I+N+I+SGK W ++  FPRV +C+   +KH   +NT VAQC LPVNMLNE++YIFLW W+L+  I+T++S++ W+ RI    ++ +F KK L + +     + L  N   F +E+LR+DGLFL++MI IN+GDI+AA+I+  LW+ Y +   +  F
Sbjct:    1 MAKARRRIYEYCNFCVFSKHLGTWLVSTYFFIKCLYGINVIGQLYLMKSFLGF--NSSMSSFGYTILNDIISGKSWHETRNFPRVSYCYNADIKHLGAVNTYVAQCTLPVNMLNEKIYIFLWFWVLLVGIITLLSILQWVVRIVFLSKRSMFAKKLLKMHQSYQRSENLTVN--HFIKEYLRYDGLFLIRMIYINSGDIVAAEILNGLWETYKNKYINHDF 217
The following BLAST results are available for this feature:
BLAST of Innexin vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Innexin vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
inx-12.775e-3133.67Innexin [Source:UniProtKB/TrEMBL;Acc:Q17394][more]
inx-12.775e-3133.67Innexin [Source:UniProtKB/TrEMBL;Acc:Q17394][more]
inx-182.909e-3135.19Innexin [Source:UniProtKB/TrEMBL;Acc:Q8MXG8][more]
inx-182.909e-3135.19Innexin [Source:UniProtKB/TrEMBL;Acc:Q8MXG8][more]
inx-183.586e-3135.19Innexin [Source:UniProtKB/TrEMBL;Acc:Q8MXG8][more]
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BLAST of Innexin vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
shakB1.529e-830.65gene:FBgn0085387 transcript:FBtr0112572[more]
shakB1.772e-830.65gene:FBgn0085387 transcript:FBtr0309369[more]
shakB1.772e-830.65gene:FBgn0085387 transcript:FBtr0309370[more]
shakB1.772e-830.65gene:FBgn0085387 transcript:FBtr0342859[more]
shakB1.907e-830.65gene:FBgn0085387 transcript:FBtr0112570[more]
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BLAST of Innexin vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Innexin vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Innexin vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Innexin vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q03412|UNC7_CAEEL5.646e-2832.14Innexin unc-7 OS=Caenorhabditis elegans OX=6239 GN... [more]
sp|O01393|UNC9_CAEEL4.016e-2732.06Innexin unc-9 OS=Caenorhabditis elegans OX=6239 GN... [more]
sp|Q27295|EAT5_CAEEL6.969e-2733.66Innexin eat-5 OS=Caenorhabditis elegans OX=6239 GN... [more]
sp|A8WVX4|INX19_CAEBR2.604e-2531.36Innexin-19 OS=Caenorhabditis briggsae OX=6238 GN=i... [more]
sp|Q23157|INX11_CAEEL6.741e-2532.29Innexin-11 OS=Caenorhabditis elegans OX=6239 GN=in... [more]
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BLAST of Innexin vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A448WMM29.508e-6948.47Innexin OS=Protopolystoma xenopodis OX=117903 GN=i... [more]
A0A2H1CKS11.042e-6647.58Innexin OS=Fasciola hepatica OX=6192 GN=inx PE=3 S... [more]
A0A4S2LNY21.080e-6346.75Innexin OS=Opisthorchis felineus OX=147828 GN=inx ... [more]
G7YJJ01.349e-6346.75Innexin OS=Clonorchis sinensis OX=79923 GN=inx PE=... [more]
A0A4E0S0S12.576e-6247.58Innexin OS=Fasciola hepatica OX=6192 GN=inx PE=3 S... [more]
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BLAST of Innexin vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Innexin vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Innexin vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Innexin vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Innexin vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Innexin vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000031896.13.974e-16598.84SMESG000031896.1[more]
SMESG000065083.12.426e-7352.36SMESG000065083.1[more]
SMESG000070656.16.547e-7149.79SMESG000070656.1[more]
SMESG000080788.18.256e-6047.77SMESG000080788.1[more]
SMESG000080705.16.245e-5644.34SMESG000080705.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30017164 ID=SMED30017164|Name=Innexin|organism=Schmidtea mediterranea sexual|type=transcript|length=2630bp
TCAAAATATGCAGAGTTGACTGTAATGCAGAAAAAACCACAACAAGCGTT
CAAAGATACAAATTTAGAAGGCACCAATCAGAAGGTACAGAACCCATGGA
AATAAATGAAATACTAGAGAAAGATAATCTAGGACCAGAATCAACAATTT
TTATAGAGGATGCACAAGAAGAAAAATATATCACATTAATGTATAACAGA
AACGTTAAGAAAACAATAATAGTTATAAATGAGAAAGAGATCGATGCTTA
CTTTGTTGAGAAAGGTTATGAAGACATAACCTTGACGCCCCAGGGAGTAA
TGTTGTAAGATTGTCTAGTTATAAGTTTTCAAATAAAAAATATTATGTAG
TGGGACACAATAGGTATAGAATATATATAGATGATAGATAGAATTAAAGA
TGATGATCATGACAATGAGATGATGGCAACAATTGTTTTAATCTAATTTC
ATTAACTTATGTGATTTTAAAATTGATTATGACAATTTTATAATTTGTTT
TATAATATGTTCAGTAATTGGTAAAAATCACTCATATCTAAAAATATATT
ATATTGCATCTCAGAATCATTGAAGAAAAAATCAATAGCAAGGAATCAAA
CAAGCTCCTCCTGTCAAATTGAACCAATGCATAAACCATCATTATCACCA
AGTACATACACATGCACTACATATAAAAACAAAATAAAATTCTACAAAGC
ATTACAGAACAGCATACACAGGGTTAACTAAGAAGTAACAATCATAAAAT
TCGACAATCAATTCTGCATCCGAAATGCGTTAAAAGTTGATACGGAAGAA
AGAGAAATGTTTCTCATGAAATTTAATATCATACCAAGACTTAGATTAAG
GGAACTTATAGGTAAATTTGAGGAAAGCGTGAATATGGAAAAGCATCAAG
ATTTCAAATAGAAAATATATGCACTCTACAAGAACAATAATATCTTGAAA
ACATAAAGAAGAAATTTTAGCTACAGGAAAAAATATATCACTGCCCATCA
GAACTATCTCAAAAAGAAAAATGATACCCGAGTTCAATAATATAACAATA
CAACTACAGCAATAGAAACATTATTCGTTCTAACAATAGAGAATCCTTTC
AAAAGTTTGGAACCCATTTGGTCAAATGTAATAATAGAATATAAGTTTAT
AGAAAAAAGCATTTACAAATCAAACATTAACACTGAAACACTGAATAGAA
AAACAGTATTTGTTGACATGACGGAAAACTATTTTAGATGAAATCTTAGA
CCAGTAGATGTTTGTATTCGAAAATTCAAAGGAGACTTTTTTTTCAAAGC
AAAATAACTTTAAGAACCAAAGAATGGCAATTCTTCCCAGAAAGGAATAC
AGATATAGAAAATATCTTAAGGAATATGGAAAAATTGACAGCTTGGATAG
AAATTTTAAAAAATTTATATAATAAAATAATCGTTGGATTCGACATTGTC
AGAAAACCTAAAAATTGTTCAATAGACTTAGATGAAGTCATGGGAATAAG
AAAAATGTCGAATATACAATATATGAAAACATTCGAATAAAATGTTTCAG
AGGACCTAATCAAGTTATCAAATCTCGCTGTTTCAGTGTCTTAGTTAGTT
GTAAGCATGGATTAAAACATTTGAAATTAGAAATTAAATTTATCGGGCAT
GAAGTATAAATGCGTCTTTATGAATAAGCAAACACCCGTTGGAGAGGGAA
CCGCACGGTTAACAGGTTATTTAACAGCATCGTGAATATCGAAAGGATGC
TTTAGCCAATTTTCGGAAAACAGTTTACAGATTTTGCAACTTCTTCATTG
TCAGTAAAAGAATGGGAACTCGAATCACAATTTATTATATCCTCCTAAAG
TTTCTTTACCTCACGAATAGTTTCCTACAGTTGTATTTAATGCAGAGATT
TTTAGGATTTTCAGACAATCAAAACAATTCATTATTCGGATTGAATATCA
TAAACAATATCCTCTCTGGCAAAGACTGGCAGGACTCAATGATATTCCCT
CGAGTAGGTTTTTGTTTCGTTCGAGTCAAGCATTGGAGTGGTATGAACAC
CGTCGTCGCCCAGTGCGTCTTACCAGTGAACATGCTCAATGAACGACTTT
ATATTTTTCTTTGGTGTTGGATTTTAGTTGGAATGATTCTTACAATAGTG
AGTCTTATACTATGGATTTGGAGGATTTATTCAAGTCTTCAAAAGCCTCT
TTTCACCAAGAAGTTTCTGTTAATAAAAGAAATAATTTCCAATGACGACA
AACTTGACGATAATTTGGTCGCCTTTGAAAGGGAATTTCTTCGGCATGAC
GGTTTGTTCTTGTTGAAGATGATTTCGATTAATGCCGGAGACATTATTGC
GGCGGATATCGTTGTAAATTTATGGCAGATTTATAATTCGAATCAGTTTT
CCAGGAAGTTTTCTGACTCCAGTAATCATTCGGACTTGTCGAGTCACGGA
ACCTCTAGAAACCTGATCAATTCGTTTATTAATTTCCATAAAAATATTGT
CAAAATAAGAAAATAGAATTTTTTTTTTATTTTTTTAAAAAAATTTTTTG
TTGCAGTTTTGATGATGCGATCAAAGGATAATAAATGTTATTTTAATAAT
TTTAGTGATTTTATAGATTATATTGTGCAG
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protein sequence of SMED30017164-orf-1

>SMED30017164-orf-1 ID=SMED30017164-orf-1|Name=SMED30017164-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=102bp
KICRVDCNAEKTTTSVQRYKFRRHQSEGTEPMEINEILEKDNLGPESTIF
IEDAQEEKYITLMYNRNVKKTIIVINEKEIDAYFVEKGYEDITLTPQGVM
L*
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protein sequence of SMED30017164-orf-2

>SMED30017164-orf-2 ID=SMED30017164-orf-2|Name=SMED30017164-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=235bp
MGTRITIYYILLKFLYLTNSFLQLYLMQRFLGFSDNQNNSLFGLNIINNI
LSGKDWQDSMIFPRVGFCFVRVKHWSGMNTVVAQCVLPVNMLNERLYIFL
WCWILVGMILTIVSLILWIWRIYSSLQKPLFTKKFLLIKEIISNDDKLDD
NLVAFEREFLRHDGLFLLKMISINAGDIIAADIVVNLWQIYNSNQFSRKF
SDSSNHSDLSSHGTSRNLINSFINFHKNIVKIRK*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0005886plasma membrane
GO:0005921gap junction
GO:0016020membrane
GO:0016021integral component of membrane
GO:0030054cell junction
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000028Category 2 cell
PLANA:0002142parenchyma
Vocabulary: INTERPRO
TermDefinition
IPR000990Innexin
Vocabulary: biological process
TermDefinition
GO:0006810transport
GO:0006811ion transport
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000990InnexinPRINTSPR01262INNEXINcoord: 9..23
score: 45.33
coord: 61..70
score: 48.4
coord: 85..101
score: 53.88
IPR000990InnexinPFAMPF00876Innexincoord: 2..191
e-value: 3.3E-53
score: 181.2
IPR000990InnexinPANTHERPTHR11893INNEXINcoord: 3..211
IPR000990InnexinPROSITEPS51013PANNEXINcoord: 1..197
score: 17.053
NoneNo IPR availablePANTHERPTHR11893:SF36INNEXIN-5coord: 3..211
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 97..119