SMED30017099
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30017099 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 11
Alignments
SMED30017099 aligns in the following genomic locations:
Homology
BLAST of SMED30017099 vs. Ensembl Human
Match: HSBP1 (heat shock factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:5203]) HSP 1 Score: 50.8322 bits (120), Expect = 4.592e-9 Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 3 Query: 111 ADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 DP+T Q+L ++ ++QQMQD +S++I +D + ++DLE+N+ DLM Q+ ++E Sbjct: 4 TDPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVEE 63
BLAST of SMED30017099 vs. Ensembl Human
Match: HSBP1 (heat shock factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:5203]) HSP 1 Score: 50.8322 bits (120), Expect = 4.592e-9 Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 3 Query: 111 ADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 DP+T Q+L ++ ++QQMQD +S++I +D + ++DLE+N+ DLM Q+ ++E Sbjct: 4 TDPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVEE 63
BLAST of SMED30017099 vs. Ensembl Fly
Match: CG5446 (gene:FBgn0032429 transcript:FBtr0333094) HSP 1 Score: 46.9802 bits (110), Expect = 1.108e-7 Identity = 22/59 (37.29%), Postives = 40/59 (67.80%), Query Frame = 3 Query: 111 ADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRID 287 ADP+ QEL Y++ ++Q +QD +S++I +D +G ++DLE+++ DLM Q+ I+ Sbjct: 22 ADPKNMQELTIYVQNLLQNVQDKFQTMSDQIITRIDDMGNRIDDLEKSIADLMNQAGIE 80
BLAST of SMED30017099 vs. Ensembl Fly
Match: CG5446 (gene:FBgn0032429 transcript:FBtr0080388) HSP 1 Score: 46.9802 bits (110), Expect = 1.108e-7 Identity = 22/59 (37.29%), Postives = 40/59 (67.80%), Query Frame = 3 Query: 111 ADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRID 287 ADP+ QEL Y++ ++Q +QD +S++I +D +G ++DLE+++ DLM Q+ I+ Sbjct: 22 ADPKNMQELTIYVQNLLQNVQDKFQTMSDQIITRIDDMGNRIDDLEKSIADLMNQAGIE 80
BLAST of SMED30017099 vs. Ensembl Zebrafish
Match: hsbp1b (heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]) HSP 1 Score: 49.2914 bits (116), Expect = 1.534e-8 Identity = 21/60 (35.00%), Postives = 40/60 (66.67%), Query Frame = 3 Query: 111 ADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 DP++ Q+L ++ ++QQMQD +S++I +D + ++DLE+N+ DLM Q+ ++E Sbjct: 4 TDPKSVQDLTAVVQTLLQQMQDKFQTMSDQIIGRIDEMSTRIDDLEKNIADLMTQAGVEE 63
BLAST of SMED30017099 vs. Ensembl Zebrafish
Match: hsbp1a (heat shock factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050320-136]) HSP 1 Score: 48.9062 bits (115), Expect = 1.986e-8 Identity = 21/59 (35.59%), Postives = 40/59 (67.80%), Query Frame = 3 Query: 114 DPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 DP++ Q+L ++ ++QQMQD +S++I +D + ++DLE+N+ DLM Q+ ++E Sbjct: 5 DPKSSQDLTVVVQTLLQQMQDKFQTMSDQIIGRIDEMSTRIDDLEKNISDLMTQAGVEE 63
BLAST of SMED30017099 vs. Ensembl Zebrafish
Match: hsbp1a (heat shock factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050320-136]) HSP 1 Score: 48.9062 bits (115), Expect = 1.986e-8 Identity = 21/59 (35.59%), Postives = 40/59 (67.80%), Query Frame = 3 Query: 114 DPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 DP++ Q+L ++ ++QQMQD +S++I +D + ++DLE+N+ DLM Q+ ++E Sbjct: 5 DPKSSQDLTVVVQTLLQQMQDKFQTMSDQIIGRIDEMSTRIDDLEKNISDLMTQAGVEE 63
BLAST of SMED30017099 vs. Ensembl Zebrafish
Match: hsbp1l1 (heat shock factor binding protein 1 like 1 [Source:NCBI gene;Acc:799177]) HSP 1 Score: 45.8246 bits (107), Expect = 3.390e-7 Identity = 21/56 (37.50%), Postives = 36/56 (64.29%), Query Frame = 3 Query: 111 ADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQS 278 ++ + ++L +E MQQ+Q +SE+I + MD +G ++DLE+NV DLM Q+ Sbjct: 4 SESKAAKDLTAIMETTMQQLQSRFQNLSEQIISKMDEMGTRIDDLEKNVADLMTQA 59
BLAST of SMED30017099 vs. Ensembl Xenopus
Match: hsbp1 (heat shock factor binding protein 1 [Source:NCBI gene;Acc:496903]) HSP 1 Score: 50.447 bits (119), Expect = 6.597e-9 Identity = 23/60 (38.33%), Postives = 40/60 (66.67%), Query Frame = 3 Query: 111 ADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 DP+T Q+L ++ ++QQMQD +S++I +D + ++DLE+N+ DLM Q+ +DE Sbjct: 4 TDPKTVQDLTVVVQNLLQQMQDKFQTMSDQIIGRIDDMSTRIDDLEKNIADLMTQAGVDE 63
BLAST of SMED30017099 vs. Ensembl Mouse
Match: Hsbp1 (heat shock factor binding protein 1 [Source:MGI Symbol;Acc:MGI:1915446]) HSP 1 Score: 49.2914 bits (116), Expect = 1.728e-8 Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 3 Query: 111 ADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 DP+T Q++ +E ++QQMQD +S++I +D + ++DLE+N+ DLM Q+ ++E Sbjct: 4 TDPKTMQDITLVVETLLQQMQDKFQIMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVEE 63
BLAST of SMED30017099 vs. Ensembl Mouse
Match: Hsbp1 (heat shock factor binding protein 1 [Source:MGI Symbol;Acc:MGI:1915446]) HSP 1 Score: 49.2914 bits (116), Expect = 1.728e-8 Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 3 Query: 111 ADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 DP+T Q++ +E ++QQMQD +S++I +D + ++DLE+N+ DLM Q+ ++E Sbjct: 4 TDPKTMQDITLVVETLLQQMQDKFQIMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVEE 63
BLAST of SMED30017099 vs. UniProt/SwissProt
Match: sp|O75506|HSBP1_HUMAN (Heat shock factor-binding protein 1 OS=Homo sapiens OX=9606 GN=HSBP1 PE=1 SV=1) HSP 1 Score: 50.8322 bits (120), Expect = 2.205e-8 Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 3 Query: 111 ADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 DP+T Q+L ++ ++QQMQD +S++I +D + ++DLE+N+ DLM Q+ ++E Sbjct: 4 TDPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVEE 63
BLAST of SMED30017099 vs. UniProt/SwissProt
Match: sp|Q3ZC22|HSBP1_BOVIN (Heat shock factor-binding protein 1 OS=Bos taurus OX=9913 GN=HSBP1 PE=3 SV=1) HSP 1 Score: 50.8322 bits (120), Expect = 2.205e-8 Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 3 Query: 111 ADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 DP+T Q+L ++ ++QQMQD +S++I +D + ++DLE+N+ DLM Q+ ++E Sbjct: 4 TDPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVEE 63
BLAST of SMED30017099 vs. UniProt/SwissProt
Match: sp|Q5RDI2|HSBP1_PONAB (Heat shock factor-binding protein 1 OS=Pongo abelii OX=9601 GN=HSBP1 PE=3 SV=1) HSP 1 Score: 50.8322 bits (120), Expect = 2.428e-8 Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 3 Query: 111 ADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 DP+T Q+L ++ ++QQMQD +S++I +D + ++DLE+N+ DLM Q+ ++E Sbjct: 4 TDPKTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVEE 63
BLAST of SMED30017099 vs. UniProt/SwissProt
Match: sp|Q8K3X8|HSBP1_RAT (Heat shock factor-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hsbp1 PE=3 SV=1) HSP 1 Score: 49.2914 bits (116), Expect = 1.041e-7 Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 3 Query: 111 ADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 DP+T Q++ +E ++QQMQD +S++I +D + ++DLE+N+ DLM Q+ ++E Sbjct: 4 TDPKTMQDITLVVETLLQQMQDKFQIMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVEE 63
BLAST of SMED30017099 vs. UniProt/SwissProt
Match: sp|Q9CQZ1|HSBP1_MOUSE (Heat shock factor-binding protein 1 OS=Mus musculus OX=10090 GN=Hsbp1 PE=1 SV=1) HSP 1 Score: 49.2914 bits (116), Expect = 1.209e-7 Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 3 Query: 111 ADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 DP+T Q++ +E ++QQMQD +S++I +D + ++DLE+N+ DLM Q+ ++E Sbjct: 4 TDPKTMQDITLVVETLLQQMQDKFQIMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVEE 63
BLAST of SMED30017099 vs. TrEMBL
Match: A0A5K4F7U5 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.040e-13 Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 3 Query: 87 ARDSKFGIADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 RD FGI DP T EL++Y++ I QQMQD + + SEKI ++ +G ++ LE+NV DLM Q+ + E Sbjct: 8 VRDRSFGIPDPHTVTELSNYMQNIFQQMQDTLQQTSEKITTRIEEMGSKIDSLEKNVADLMTQAGVHE 75
BLAST of SMED30017099 vs. TrEMBL
Match: C1LJV1 (Putative heat shock factor binding protein 1 OS=Schistosoma japonicum OX=6182 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 8.447e-13 Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 3 Query: 87 ARDSKFGIADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 +D FGI DP T EL++Y++ I QQMQD + + SEKI ++ +G ++ LE+NV DLM Q+ + E Sbjct: 8 VKDKSFGIPDPHTVNELSNYMQNIFQQMQDTLQQTSEKITTRIEEMGSKIDSLEKNVADLMTQAGVHE 75
BLAST of SMED30017099 vs. TrEMBL
Match: A0A267GXM6 (Uncharacterized protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig004952g1 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.457e-12 Identity = 29/68 (42.65%), Postives = 48/68 (70.59%), Query Frame = 3 Query: 84 YARDSKFGIADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRID 287 YA+D FGIADP + EL ++++ ++Q + DN + S+KI +D +GR +++LERNV DLM Q+ ++ Sbjct: 53 YAKDKSFGIADPGSVNELTNHLQSLLQGLSDNFNHTSDKITGRIDEMGRRIDELERNVADLMTQAGVE 120
BLAST of SMED30017099 vs. TrEMBL
Match: A0A1I8IZ87 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.772e-12 Identity = 29/68 (42.65%), Postives = 48/68 (70.59%), Query Frame = 3 Query: 84 YARDSKFGIADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRID 287 YA+D FGIADP + EL ++++ ++Q + DN + S+KI +D +GR +++LERNV DLM Q+ ++ Sbjct: 59 YAKDKSFGIADPGSVNELTNHLQSLLQGLSDNFNHTSDKITGRIDEMGRRIDELERNVADLMTQAGVE 126
BLAST of SMED30017099 vs. TrEMBL
Match: A0A1I8HFY0 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.914e-12 Identity = 29/68 (42.65%), Postives = 48/68 (70.59%), Query Frame = 3 Query: 84 YARDSKFGIADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRID 287 YA+D FGIADP + EL ++++ ++Q + DN + S+KI +D +GR +++LERNV DLM Q+ ++ Sbjct: 60 YAKDKSFGIADPGSVNELTNHLQSLLQGLSDNFNHTSDKITGRIDEMGRRIDELERNVADLMTQAGVE 127
BLAST of SMED30017099 vs. Ensembl Cavefish
Match: hsbp1a (heat shock factor-binding protein 1-like [Source:NCBI gene;Acc:103023435]) HSP 1 Score: 47.3654 bits (111), Expect = 6.886e-8 Identity = 20/60 (33.33%), Postives = 40/60 (66.67%), Query Frame = 3 Query: 111 ADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 +P++ Q+L ++ ++QQMQD +S++I +D + ++DLE+N+ DLM Q+ ++E Sbjct: 4 TEPKSAQDLTVVVQTLLQQMQDKFQTMSDQIIGRIDEMSTRIDDLEKNISDLMTQAGVEE 63
BLAST of SMED30017099 vs. Ensembl Cavefish
Match: hsbp1b (heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]) HSP 1 Score: 44.669 bits (104), Expect = 6.561e-7 Identity = 21/60 (35.00%), Postives = 40/60 (66.67%), Query Frame = 3 Query: 111 ADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 DP++ Q+L ++ ++QQMQD +S++I +I+ ++DLE+N+ DLM Q+ ++E Sbjct: 4 TDPKSVQDLTGVVQTLLQQMQDKFQTMSDQIIGR-NILFTRIDDLEKNIADLMTQAGVEE 62
BLAST of SMED30017099 vs. Ensembl Nematostella
Match: EDO35978 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJY7]) HSP 1 Score: 50.0618 bits (118), Expect = 1.731e-9 Identity = 21/62 (33.87%), Postives = 42/62 (67.74%), Query Frame = 3 Query: 108 IADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDEP 293 + +P+ Q+L +++ ++ QMQD +S++I +D + ++DLE+N+G+LM Q+ +DEP Sbjct: 11 VENPENLQDLTGFVQTLLTQMQDKFQNMSDQIITRIDEMSNRIDDLEKNIGELMNQAGVDEP 72
BLAST of SMED30017099 vs. Ensembl Medaka
Match: hsbp1a (heat shock factor binding protein 1 [Source:NCBI gene;Acc:101175153]) HSP 1 Score: 49.2914 bits (116), Expect = 1.165e-8 Identity = 21/60 (35.00%), Postives = 41/60 (68.33%), Query Frame = 3 Query: 111 ADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNMDIIGRGVNDLERNVGDLMAQSRIDE 290 DP++ Q+L + ++ ++QQMQD +S++I +D + ++DLE+N+ DLM Q+ ++E Sbjct: 4 TDPKSVQDLTNVVQTLLQQMQDKFQTMSDQIIGRIDEMSTRIDDLEKNIADLMTQAGVEE 63
BLAST of SMED30017099 vs. Planmine SMEST
Match: SMESG000030373.1 (SMESG000030373.1) HSP 1 Score: 108.997 bits (271), Expect = 2.265e-32 Identity = 52/61 (85.25%), Postives = 56/61 (91.80%), Query Frame = 3 Query: 63 MSTCRDSYARDSKFGIADPQTPQELAHYIERIMQQMQDNVDRVSEKINNN--MDIIGRGVN 239 MSTCRDSYARDSKFGIADPQTPQELAHYIERIMQQMQDNVDRVSEKINNN + ++ R +N Sbjct: 1 MSTCRDSYARDSKFGIADPQTPQELAHYIERIMQQMQDNVDRVSEKINNNNILLLVSRNLN 61 The following BLAST results are available for this feature:
BLAST of SMED30017099 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 2
BLAST of SMED30017099 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of SMED30017099 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of SMED30017099 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 4
BLAST of SMED30017099 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of SMED30017099 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 2
BLAST of SMED30017099 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of SMED30017099 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30017099 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 2
BLAST of SMED30017099 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of SMED30017099 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30017099 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of SMED30017099 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 1
BLAST of SMED30017099 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30017099 ID=SMED30017099|Name=SMED30017099|organism=Schmidtea mediterranea sexual|type=transcript|length=387bpback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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