Cytospin-A
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30016941 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of Cytospin-A vs. Ensembl Human
Match: SMTN (smoothelin [Source:HGNC Symbol;Acc:HGNC:11126]) HSP 1 Score: 91.2781 bits (225), Expect = 6.319e-25 Identity = 33/72 (45.83%), Postives = 52/72 (72.22%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAKFIF 1857 ++K +LL W T+ Y++V I N+S SW+DG+AFCAL+H+F+PE+FDY LS + +NF +AF +A+ + Sbjct: 885 SIKQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAEMLV 956 HSP 2 Score: 44.2838 bits (103), Expect = 6.319e-25 Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 1914 PLIEPGDVNILGS-PDEKCVYTYIQFMYNSLKSH 2012 PL+E D+ I+G PD KCV+TY+Q +YN L+ H Sbjct: 960 PLVEVDDMMIMGKKPDPKCVFTYVQSLYNHLRRH 993
BLAST of Cytospin-A vs. Ensembl Human
Match: SMTN (smoothelin [Source:HGNC Symbol;Acc:HGNC:11126]) HSP 1 Score: 89.7373 bits (221), Expect = 4.060e-24 Identity = 33/69 (47.83%), Postives = 51/69 (73.91%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 ++K +LL W T+ Y++V I N+S SW+DG+AFCAL+H+F+PE+FDY LS + +NF +AF +A+ Sbjct: 800 SIKQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAE 868 HSP 2 Score: 43.1282 bits (100), Expect = 4.060e-24 Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 1914 PLIEPGDVNILGS-PDEKCVYTYIQFMYNSLKSH 2012 PL+E D+ I+G PD KCV+TY+Q +YN L+ H Sbjct: 898 PLVEVDDMMIMGKKPDPKCVFTYVQSLYNHLRRH 931
BLAST of Cytospin-A vs. Ensembl Human
Match: SMTNL2 (smoothelin like 2 [Source:HGNC Symbol;Acc:HGNC:24764]) HSP 1 Score: 85.8853 bits (211), Expect = 9.576e-22 Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 1624 GKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 G + ++K +LL W T YQ+V + N+S SW+DG+AFCAL+H F+P++FDY+ LS KNF LAF A+ Sbjct: 346 GVASASSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAE 420 HSP 2 Score: 38.891 bits (89), Expect = 9.576e-22 Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 3 Query: 1896 NYAGIEPLIEPGDVNILGS-PDEKCVYTYIQFMYNSLK 2006 N A E LIE D+ ++G PD CV+TY+Q +YN L+ Sbjct: 421 NLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLR 458
BLAST of Cytospin-A vs. Ensembl Human
Match: SMTN (smoothelin [Source:HGNC Symbol;Acc:HGNC:11126]) HSP 1 Score: 89.7373 bits (221), Expect = 1.869e-21 Identity = 33/69 (47.83%), Postives = 51/69 (73.91%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 ++K +LL W T+ Y++V I N+S SW+DG+AFCAL+H+F+PE+FDY LS + +NF +AF +A+ Sbjct: 800 SIKQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAE 868 HSP 2 Score: 33.8834 bits (76), Expect = 1.869e-21 Identity = 20/50 (40.00%), Postives = 25/50 (50.00%), Query Frame = 3 Query: 1854 FYILFSKIFIISCRNYAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSL 2003 F + FS S +A L++ D+ L PD KCVYTYIQ Y L Sbjct: 860 FEVAFS-----SAETHADCPQLLDTEDMVRLREPDWKCVYTYIQEFYRCL 904
BLAST of Cytospin-A vs. Ensembl Human
Match: SMTNL2 (smoothelin like 2 [Source:HGNC Symbol;Acc:HGNC:24764]) HSP 1 Score: 85.1149 bits (209), Expect = 2.056e-21 Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 1624 GKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 G + ++K +LL W T YQ+V + N+S SW+DG+AFCAL+H F+P++FDY+ LS KNF LAF A+ Sbjct: 202 GVASASSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAE 276 HSP 2 Score: 38.5058 bits (88), Expect = 2.056e-21 Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 3 Query: 1896 NYAGIEPLIEPGDVNILGS-PDEKCVYTYIQFMYNSLK 2006 N A E LIE D+ ++G PD CV+TY+Q +YN L+ Sbjct: 277 NLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLR 314
BLAST of Cytospin-A vs. Ensembl Celegans
Match: T15B12.1 (pep chromosome:WBcel235:III:5288180:5298361:1 gene:WBGene00020530.1 transcript:T15B12.1b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T15B12.1) HSP 1 Score: 87.8113 bits (216), Expect = 3.055e-23 Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 ++KD LL WI+ Y NV +TN+S SWADG+AFCALIH F P SFD+S L N+ NF LAF+ A+ Sbjct: 324 SIKDALLRWIQNRVAGYPNVNVTNFSSSWADGMAFCALIHRFAPNSFDFSKLDPNNRRYNFDLAFKVAE 392 HSP 2 Score: 40.817 bits (94), Expect = 3.055e-23 Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 3 Query: 1905 GIEPLIEPGDVNILG-SPDEKCVYTYIQFMYNSLKSHP 2015 GI PL+E D+ ++G PD KCV+TY+Q Y + HP Sbjct: 395 GIFPLLEVDDMIMMGDRPDWKCVFTYVQSFYKQFRDHP 432
BLAST of Cytospin-A vs. Ensembl Celegans
Match: T15B12.1 (pep chromosome:WBcel235:III:5294501:5298361:1 gene:WBGene00020530.1 transcript:T15B12.1a.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T15B12.1) HSP 1 Score: 86.6557 bits (213), Expect = 5.654e-23 Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 ++KD LL WI+ Y NV +TN+S SWADG+AFCALIH F P SFD+S L N+ NF LAF+ A+ Sbjct: 114 SIKDALLRWIQNRVAGYPNVNVTNFSSSWADGMAFCALIHRFAPNSFDFSKLDPNNRRYNFDLAFKVAE 182 HSP 2 Score: 41.2022 bits (95), Expect = 5.654e-23 Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 3 Query: 1905 GIEPLIEPGDVNILG-SPDEKCVYTYIQFMYNSLKSHP 2015 GI PL+E D+ ++G PD KCV+TY+Q Y + HP Sbjct: 185 GIFPLLEVDDMIMMGDRPDWKCVFTYVQSFYKQFRDHP 222
BLAST of Cytospin-A vs. Ensembl Celegans
Match: T15B12.1 (pep chromosome:WBcel235:III:5294620:5298361:1 gene:WBGene00020530.1 transcript:T15B12.1a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T15B12.1) HSP 1 Score: 86.6557 bits (213), Expect = 5.654e-23 Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 ++KD LL WI+ Y NV +TN+S SWADG+AFCALIH F P SFD+S L N+ NF LAF+ A+ Sbjct: 114 SIKDALLRWIQNRVAGYPNVNVTNFSSSWADGMAFCALIHRFAPNSFDFSKLDPNNRRYNFDLAFKVAE 182 HSP 2 Score: 41.2022 bits (95), Expect = 5.654e-23 Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 3 Query: 1905 GIEPLIEPGDVNILG-SPDEKCVYTYIQFMYNSLKSHP 2015 GI PL+E D+ ++G PD KCV+TY+Q Y + HP Sbjct: 185 GIFPLLEVDDMIMMGDRPDWKCVFTYVQSFYKQFRDHP 222
BLAST of Cytospin-A vs. Ensembl Celegans
Match: atn-1 (AcTiniN [Source:UniProtKB/TrEMBL;Acc:Q9XVU8]) HSP 1 Score: 83.9593 bits (206), Expect = 1.158e-16 Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 1 Query: 1630 ITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 + +L+ +D LL+W ++ T Y NV + N+ SW DGLAFCALIH P+ DYS L DP+ N LAF+ A+ Sbjct: 76 VEELSARDGLLLWCQRKTAPYNNVNVQNFHNSWKDGLAFCALIHRHRPDLLDYSQLHKGDPIHNLNLAFDIAE 148 HSP 2 Score: 22.3274 bits (46), Expect = 1.158e-16 Identity = 7/24 (29.17%), Postives = 14/24 (58.33%), Query Frame = 3 Query: 1938 NILGSPDEKCVYTYIQFMYNSLKS 2009 ++ PDEK TY+ Y++ ++ Sbjct: 161 DVSRHPDEKSTMTYVSCFYHAFRN 184
BLAST of Cytospin-A vs. Ensembl Celegans
Match: atn-1 (AcTiniN [Source:UniProtKB/TrEMBL;Acc:Q9XVU8]) HSP 1 Score: 83.5741 bits (205), Expect = 1.430e-16 Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 1 Query: 1630 ITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 + +L+ +D LL+W ++ T Y NV + N+ SW DGLAFCALIH P+ DYS L DP+ N LAF+ A+ Sbjct: 147 VEELSARDGLLLWCQRKTAPYNNVNVQNFHNSWKDGLAFCALIHRHRPDLLDYSQLHKGDPIHNLNLAFDIAE 219 HSP 2 Score: 22.3274 bits (46), Expect = 1.430e-16 Identity = 7/24 (29.17%), Postives = 14/24 (58.33%), Query Frame = 3 Query: 1938 NILGSPDEKCVYTYIQFMYNSLKS 2009 ++ PDEK TY+ Y++ ++ Sbjct: 232 DVSRHPDEKSTMTYVSCFYHAFRN 255
BLAST of Cytospin-A vs. Ensembl Fly
Match: CG34417 (gene:FBgn0085446 transcript:FBtr0336674) HSP 1 Score: 100.138 bits (248), Expect = 5.517e-25 Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 1 Query: 1645 LKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETA 1845 +KD LL W + TQEY+NV+I N+S SW+DGLAFCALIHHF P++FDY+ L+ NF LAF A Sbjct: 3391 VKDQLLQWCKHKTQEYENVQINNFSSSWSDGLAFCALIHHFLPDAFDYTTLTKQTRRHNFELAFSVA 3457 HSP 2 Score: 34.6538 bits (78), Expect = 5.517e-25 Identity = 14/36 (38.89%), Postives = 23/36 (63.89%), Query Frame = 3 Query: 1902 AGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKS 2009 AGI PL++ D+ + PD KCV+ Y+Q +Y ++ Sbjct: 3461 AGIAPLLDVEDMVEMSRPDWKCVFVYVQSIYRRFRN 3496
BLAST of Cytospin-A vs. Ensembl Fly
Match: CG34417 (gene:FBgn0085446 transcript:FBtr0345070) HSP 1 Score: 100.138 bits (248), Expect = 5.524e-25 Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 1 Query: 1645 LKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETA 1845 +KD LL W + TQEY+NV+I N+S SW+DGLAFCALIHHF P++FDY+ L+ NF LAF A Sbjct: 3105 VKDQLLQWCKHKTQEYENVQINNFSSSWSDGLAFCALIHHFLPDAFDYTTLTKQTRRHNFELAFSVA 3171 HSP 2 Score: 34.6538 bits (78), Expect = 5.524e-25 Identity = 14/36 (38.89%), Postives = 23/36 (63.89%), Query Frame = 3 Query: 1902 AGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKS 2009 AGI PL++ D+ + PD KCV+ Y+Q +Y ++ Sbjct: 3175 AGIAPLLDVEDMVEMSRPDWKCVFVYVQSIYRRFRN 3210
BLAST of Cytospin-A vs. Ensembl Fly
Match: CG34417 (gene:FBgn0085446 transcript:FBtr0336670) HSP 1 Score: 98.5969 bits (244), Expect = 5.906e-25 Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 1 Query: 1645 LKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETA 1845 +KD LL W + TQEY+NV+I N+S SW+DGLAFCALIHHF P++FDY+ L+ NF LAF A Sbjct: 1602 VKDQLLQWCKHKTQEYENVQINNFSSSWSDGLAFCALIHHFLPDAFDYTTLTKQTRRHNFELAFSVA 1668 HSP 2 Score: 36.1946 bits (82), Expect = 5.906e-25 Identity = 14/36 (38.89%), Postives = 23/36 (63.89%), Query Frame = 3 Query: 1902 AGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKS 2009 AGI PL++ D+ + PD KCV+ Y+Q +Y ++ Sbjct: 1672 AGIAPLLDVEDMVEMSRPDWKCVFVYVQSIYRRFRN 1707
BLAST of Cytospin-A vs. Ensembl Fly
Match: CG34417 (gene:FBgn0085446 transcript:FBtr0301323) HSP 1 Score: 99.7525 bits (247), Expect = 6.138e-25 Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 1 Query: 1645 LKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETA 1845 +KD LL W + TQEY+NV+I N+S SW+DGLAFCALIHHF P++FDY+ L+ NF LAF A Sbjct: 3434 VKDQLLQWCKHKTQEYENVQINNFSSSWSDGLAFCALIHHFLPDAFDYTTLTKQTRRHNFELAFSVA 3500 HSP 2 Score: 35.039 bits (79), Expect = 6.138e-25 Identity = 14/36 (38.89%), Postives = 23/36 (63.89%), Query Frame = 3 Query: 1902 AGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKS 2009 AGI PL++ D+ + PD KCV+ Y+Q +Y ++ Sbjct: 3504 AGIAPLLDVEDMVEMSRPDWKCVFVYVQSIYRRFRN 3539
BLAST of Cytospin-A vs. Ensembl Fly
Match: CG34417 (gene:FBgn0085446 transcript:FBtr0303205) HSP 1 Score: 100.138 bits (248), Expect = 6.246e-25 Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 1 Query: 1645 LKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETA 1845 +KD LL W + TQEY+NV+I N+S SW+DGLAFCALIHHF P++FDY+ L+ NF LAF A Sbjct: 3222 VKDQLLQWCKHKTQEYENVQINNFSSSWSDGLAFCALIHHFLPDAFDYTTLTKQTRRHNFELAFSVA 3288 HSP 2 Score: 34.6538 bits (78), Expect = 6.246e-25 Identity = 14/36 (38.89%), Postives = 23/36 (63.89%), Query Frame = 3 Query: 1902 AGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKS 2009 AGI PL++ D+ + PD KCV+ Y+Q +Y ++ Sbjct: 3292 AGIAPLLDVEDMVEMSRPDWKCVFVYVQSIYRRFRN 3327
BLAST of Cytospin-A vs. Ensembl Zebrafish
Match: smtnb (smoothelin b [Source:ZFIN;Acc:ZDB-GENE-070912-2]) HSP 1 Score: 91.2781 bits (225), Expect = 1.900e-24 Identity = 36/69 (52.17%), Postives = 51/69 (73.91%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 ++K +LL W T+ Y+NV I N+S SW+DG+AFCAL+H+F+PE+FDYS LS + +NF AF TA+ Sbjct: 291 SIKQMLLDWCRSKTRSYENVDIQNFSSSWSDGMAFCALVHNFFPEAFDYSSLSPTNRRQNFETAFSTAE 359 HSP 2 Score: 42.3578 bits (98), Expect = 1.900e-24 Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 3 Query: 1899 YAGIEPLIEPGDVNILGS-PDEKCVYTYIQFMYNSLK 2006 YA PL+E D+ I+G PD KCV+TY+Q + N L+ Sbjct: 388 YANCMPLLEVEDMMIMGKKPDSKCVFTYVQSLVNHLR 424
BLAST of Cytospin-A vs. Ensembl Zebrafish
Match: smtnl1 (smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]) HSP 1 Score: 98.2117 bits (243), Expect = 5.014e-22 Identity = 38/78 (48.72%), Postives = 55/78 (70.51%), Query Frame = 1 Query: 1621 VGKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAKFI 1854 VG ++K +L W + TQ+Y+ V I N+S SW+DGLAFCAL+H F+P +FD+S L +++ KNFTLAF TA+ + Sbjct: 221 VGIAGGASIKQRILNWCKSKTQKYEGVSIDNFSSSWSDGLAFCALVHRFFPSAFDFSTLKASEREKNFTLAFSTAETL 298
BLAST of Cytospin-A vs. Ensembl Zebrafish
Match: smtnl1 (smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]) HSP 1 Score: 98.2117 bits (243), Expect = 6.478e-22 Identity = 38/78 (48.72%), Postives = 55/78 (70.51%), Query Frame = 1 Query: 1621 VGKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAKFI 1854 VG ++K +L W + TQ+Y+ V I N+S SW+DGLAFCAL+H F+P +FD+S L +++ KNFTLAF TA+ + Sbjct: 216 VGIAGGASIKQRILNWCKSKTQKYEGVSIDNFSSSWSDGLAFCALVHRFFPSAFDFSTLKASEREKNFTLAFSTAETL 293 HSP 2 Score: 26.9498 bits (58), Expect = 6.478e-22 Identity = 13/31 (41.94%), Postives = 22/31 (70.97%), Query Frame = 3 Query: 1914 PLIEPGDVNILG-SPDEKCVYTYIQFMYNSL 2003 PL+E D+ ++G +PD CV+TY+Q + + L Sbjct: 298 PLLEVSDMLLMGKNPDPLCVFTYVQALCHHL 328
BLAST of Cytospin-A vs. Ensembl Zebrafish
Match: smtnl (smoothelin, like [Source:ZFIN;Acc:ZDB-GENE-040212-1]) HSP 1 Score: 86.6557 bits (213), Expect = 7.357e-22 Identity = 42/105 (40.00%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 1573 RKISQQIDPSNKIDPK-------------VGKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 R I +++D N PK G + ++K +LL W T YQN+ I N+S SW+DG+AFCAL+H F+P FDY+ LS + NF LAF TA+ Sbjct: 348 RSIFERLDSENNSRPKPVDSKPKLKRSQSFGVSSASSIKQILLEWCRSKTIGYQNIDIQNFSSSWSDGMAFCALVHSFFPTEFDYNGLSPAERKHNFELAFSTAE 452 HSP 2 Score: 38.1206 bits (87), Expect = 7.357e-22 Identity = 20/52 (38.46%), Postives = 30/52 (57.69%), Query Frame = 3 Query: 1854 FYILFSKIFIISCRNYAGIEPLIEPGDVNILGS-PDEKCVYTYIQFMYNSLK 2006 F + FS + AG + LIE D+ ++G PD CV+TY+Q +YN L+ Sbjct: 444 FELAFS-----TAEKKAGCDRLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLR 490
BLAST of Cytospin-A vs. Ensembl Zebrafish
Match: smtnl (smoothelin, like [Source:ZFIN;Acc:ZDB-GENE-040212-1]) HSP 1 Score: 85.5001 bits (210), Expect = 1.467e-21 Identity = 41/105 (39.05%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 1573 RKISQQIDPSNKIDPK-------------VGKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 R I +++D N PK G + ++K +LL W T YQN+ I N+S SW+DG+AFCAL+H F+P FDY+ L+ + NF LAF TA+ Sbjct: 348 RSIFERLDSENNSRPKPVDSKPKLKRSQSFGVSSASSIKQILLEWCRSKTIGYQNIDIQNFSSSWSDGMAFCALVHSFFPTEFDYNGLTPAERKHNFELAFSTAE 452 HSP 2 Score: 38.1206 bits (87), Expect = 1.467e-21 Identity = 20/52 (38.46%), Postives = 30/52 (57.69%), Query Frame = 3 Query: 1854 FYILFSKIFIISCRNYAGIEPLIEPGDVNILG-SPDEKCVYTYIQFMYNSLK 2006 F + FS + AG + LIE D+ ++G PD CV+TY+Q +YN L+ Sbjct: 444 FELAFS-----TAEKKAGCDRLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLR 490
BLAST of Cytospin-A vs. Ensembl Xenopus
Match: smtn (ES1 protein homolog, mitochondrial-like [Source:Xenbase;Acc:XB-GENE-5871768]) HSP 1 Score: 91.6633 bits (226), Expect = 4.999e-25 Identity = 34/72 (47.22%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAKFIF 1857 ++K +LL W + T+ Y++V I N+S SW+DG+AFCAL+H+F+PE+FDY+ L+ + KNF LAF A+ + Sbjct: 934 SIKQMLLDWCKAKTRGYEHVNIQNFSSSWSDGMAFCALVHNFFPEAFDYNQLNPQNRRKNFDLAFSAAEMLV 1005 HSP 2 Score: 44.2838 bits (103), Expect = 4.999e-25 Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 1914 PLIEPGDVNILGS-PDEKCVYTYIQFMYNSLKSH 2012 PL+E D+ I+G PD KCV+TY+Q +YN L+ H Sbjct: 1009 PLVEVEDMMIMGKRPDSKCVFTYVQSLYNHLRRH 1042
BLAST of Cytospin-A vs. Ensembl Xenopus
Match: smtn (ES1 protein homolog, mitochondrial-like [Source:Xenbase;Acc:XB-GENE-5871768]) HSP 1 Score: 91.6633 bits (226), Expect = 5.614e-25 Identity = 34/72 (47.22%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAKFIF 1857 ++K +LL W + T+ Y++V I N+S SW+DG+AFCAL+H+F+PE+FDY+ L+ + KNF LAF A+ + Sbjct: 885 SIKQMLLDWCKAKTRGYEHVNIQNFSSSWSDGMAFCALVHNFFPEAFDYNQLNPQNRRKNFDLAFSAAEMLV 956 HSP 2 Score: 44.2838 bits (103), Expect = 5.614e-25 Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 1914 PLIEPGDVNILGS-PDEKCVYTYIQFMYNSLKSH 2012 PL+E D+ I+G PD KCV+TY+Q +YN L+ H Sbjct: 960 PLVEVEDMMIMGKRPDSKCVFTYVQSLYNHLRRH 993
BLAST of Cytospin-A vs. Ensembl Xenopus
Match: smtn (ES1 protein homolog, mitochondrial-like [Source:Xenbase;Acc:XB-GENE-5871768]) HSP 1 Score: 91.2781 bits (225), Expect = 6.196e-25 Identity = 34/72 (47.22%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAKFIF 1857 ++K +LL W + T+ Y++V I N+S SW+DG+AFCAL+H+F+PE+FDY+ L+ + KNF LAF A+ + Sbjct: 887 SIKQMLLDWCKAKTRGYEHVNIQNFSSSWSDGMAFCALVHNFFPEAFDYNQLNPQNRRKNFDLAFSAAEMLV 958 HSP 2 Score: 44.2838 bits (103), Expect = 6.196e-25 Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 1914 PLIEPGDVNILGS-PDEKCVYTYIQFMYNSLKSH 2012 PL+E D+ I+G PD KCV+TY+Q +YN L+ H Sbjct: 962 PLVEVEDMMIMGKRPDSKCVFTYVQSLYNHLRRH 995
BLAST of Cytospin-A vs. Ensembl Xenopus
Match: smtn (ES1 protein homolog, mitochondrial-like [Source:Xenbase;Acc:XB-GENE-5871768]) HSP 1 Score: 91.6633 bits (226), Expect = 7.131e-25 Identity = 34/72 (47.22%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAKFIF 1857 ++K +LL W + T+ Y++V I N+S SW+DG+AFCAL+H+F+PE+FDY+ L+ + KNF LAF A+ + Sbjct: 844 SIKQMLLDWCKAKTRGYEHVNIQNFSSSWSDGMAFCALVHNFFPEAFDYNQLNPQNRRKNFDLAFSAAEMLV 915 HSP 2 Score: 43.8986 bits (102), Expect = 7.131e-25 Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 1914 PLIEPGDVNILGS-PDEKCVYTYIQFMYNSLKSH 2012 PL+E D+ I+G PD KCV+TY+Q +YN L+ H Sbjct: 919 PLVEVEDMMIMGKRPDSKCVFTYVQSLYNHLRRH 952
BLAST of Cytospin-A vs. Ensembl Xenopus
Match: smtn (ES1 protein homolog, mitochondrial-like [Source:Xenbase;Acc:XB-GENE-5871768]) HSP 1 Score: 90.1225 bits (222), Expect = 5.775e-21 Identity = 34/69 (49.28%), Postives = 52/69 (75.36%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 ++K +LL W + T+ Y++V I N+S SW+DG+AFCAL+H+F+PE+FDY+ L+ + KNF LAF A+ Sbjct: 934 SIKQMLLDWCKAKTRGYEHVNIQNFSSSWSDGMAFCALVHNFFPEAFDYNQLNPQNRRKNFDLAFSAAE 1002 HSP 2 Score: 31.9574 bits (71), Expect = 5.775e-21 Identity = 15/39 (38.46%), Postives = 21/39 (53.85%), Query Frame = 3 Query: 1887 SCRNYAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSL 2003 + +A L++ D+ + PD KCVYTYIQ Y L Sbjct: 1000 AAEKHADCPQLLDAEDMVRMREPDWKCVYTYIQEFYRCL 1038
BLAST of Cytospin-A vs. Ensembl Mouse
Match: Smtn (smoothelin [Source:MGI Symbol;Acc:MGI:1354727]) HSP 1 Score: 90.1225 bits (222), Expect = 3.889e-24 Identity = 33/69 (47.83%), Postives = 51/69 (73.91%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 ++K +LL W T+ Y++V I N+S SW+DG+AFCAL+H+F+PE+FDY LS + +NF +AF +A+ Sbjct: 806 SIKQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEMAFSSAE 874 HSP 2 Score: 42.3578 bits (98), Expect = 3.889e-24 Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 1914 PLIEPGDVNILGS-PDEKCVYTYIQFMYNSLKSH 2012 PL+E D+ I+G PD KCV+TY+Q +YN L+ H Sbjct: 904 PLVEVEDMMIMGKKPDPKCVFTYVQSLYNHLRRH 937
BLAST of Cytospin-A vs. Ensembl Mouse
Match: Smtnl2 (smoothelin-like 2 [Source:MGI Symbol;Acc:MGI:2442764]) HSP 1 Score: 87.4261 bits (215), Expect = 2.745e-22 Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 1624 GKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 G + ++K +LL W T YQ+V + N+S SW+DG+AFCAL+H F+P++FDY+ LS KNF LAF A+ Sbjct: 307 GVASASSIKQILLEWCRSKTVGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNALSPTQRQKNFELAFTMAE 381 HSP 2 Score: 38.891 bits (89), Expect = 2.745e-22 Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 3 Query: 1896 NYAGIEPLIEPGDVNILGS-PDEKCVYTYIQFMYNSLK 2006 N A E LIE D+ ++G PD CV+TY+Q +YN L+ Sbjct: 382 NLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLR 419
BLAST of Cytospin-A vs. Ensembl Mouse
Match: Smtnl2 (smoothelin-like 2 [Source:MGI Symbol;Acc:MGI:2442764]) HSP 1 Score: 87.4261 bits (215), Expect = 3.050e-22 Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 1624 GKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 G + ++K +LL W T YQ+V + N+S SW+DG+AFCAL+H F+P++FDY+ LS KNF LAF A+ Sbjct: 341 GVASASSIKQILLEWCRSKTVGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNALSPTQRQKNFELAFTMAE 415 HSP 2 Score: 38.5058 bits (88), Expect = 3.050e-22 Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 3 Query: 1896 NYAGIEPLIEPGDVNILGS-PDEKCVYTYIQFMYNSLK 2006 N A E LIE D+ ++G PD CV+TY+Q +YN L+ Sbjct: 416 NLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLR 453
BLAST of Cytospin-A vs. Ensembl Mouse
Match: Smtnl1 (smoothelin-like 1 [Source:MGI Symbol;Acc:MGI:1915928]) HSP 1 Score: 88.9669 bits (219), Expect = 3.151e-22 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLK---NFTLAFETAK 1848 +K++LL W T+ Y++V I N+S SW+ G+AFCALIH F+PE+FDY+ L DP K NFTLAF TA+ Sbjct: 344 GVKNMLLEWCRAMTRNYEHVDIQNFSSSWSSGMAFCALIHKFFPEAFDYAEL---DPAKRRHNFTLAFSTAE 412 HSP 2 Score: 36.965 bits (84), Expect = 3.151e-22 Identity = 21/50 (42.00%), Postives = 26/50 (52.00%), Query Frame = 3 Query: 1854 FYILFSKIFIISCRNYAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSL 2003 F + FS + A L+E D+ L PD KCVYTYIQ +Y SL Sbjct: 404 FTLAFS-----TAEKLADCAQLLEVDDMVRLAVPDSKCVYTYIQELYRSL 448
BLAST of Cytospin-A vs. Ensembl Mouse
Match: Smtn (smoothelin [Source:MGI Symbol;Acc:MGI:1354727]) HSP 1 Score: 90.1225 bits (222), Expect = 1.911e-21 Identity = 33/69 (47.83%), Postives = 51/69 (73.91%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 ++K +LL W T+ Y++V I N+S SW+DG+AFCAL+H+F+PE+FDY LS + +NF +AF +A+ Sbjct: 806 SIKQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEMAFSSAE 874 HSP 2 Score: 33.113 bits (74), Expect = 1.911e-21 Identity = 20/50 (40.00%), Postives = 25/50 (50.00%), Query Frame = 3 Query: 1854 FYILFSKIFIISCRNYAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSL 2003 F + FS S +A L++ D+ L PD KCVYTYIQ Y L Sbjct: 866 FEMAFS-----SAETHADCPQLLDTEDMVRLREPDWKCVYTYIQEFYRCL 910
BLAST of Cytospin-A vs. UniProt/SwissProt
Match: sp|Q8CI12|SMTL2_MOUSE (Smoothelin-like protein 2 OS=Mus musculus OX=10090 GN=Smtnl2 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.855e-21 Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 1624 GKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 G + ++K +LL W T YQ+V + N+S SW+DG+AFCAL+H F+P++FDY+ LS KNF LAF A+ Sbjct: 341 GVASASSIKQILLEWCRSKTVGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNALSPTQRQKNFELAFTMAE 415 HSP 2 Score: 38.5058 bits (88), Expect = 1.855e-21 Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 3 Query: 1896 NYAGIEPLIEPGDVNILGS-PDEKCVYTYIQFMYNSLK 2006 N A E LIE D+ ++G PD CV+TY+Q +YN L+ Sbjct: 416 NLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLR 453
BLAST of Cytospin-A vs. UniProt/SwissProt
Match: sp|Q99LM3|SMTL1_MOUSE (Smoothelin-like protein 1 OS=Mus musculus OX=10090 GN=Smtnl1 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.917e-21 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLK---NFTLAFETAK 1848 +K++LL W T+ Y++V I N+S SW+ G+AFCALIH F+PE+FDY+ L DP K NFTLAF TA+ Sbjct: 344 GVKNMLLEWCRAMTRNYEHVDIQNFSSSWSSGMAFCALIHKFFPEAFDYAEL---DPAKRRHNFTLAFSTAE 412 HSP 2 Score: 36.965 bits (84), Expect = 1.917e-21 Identity = 21/50 (42.00%), Postives = 26/50 (52.00%), Query Frame = 3 Query: 1854 FYILFSKIFIISCRNYAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSL 2003 F + FS + A L+E D+ L PD KCVYTYIQ +Y SL Sbjct: 404 FTLAFS-----TAEKLADCAQLLEVDDMVRLAVPDSKCVYTYIQELYRSL 448
BLAST of Cytospin-A vs. UniProt/SwissProt
Match: sp|Q2TAL5|SMTL2_HUMAN (Smoothelin-like protein 2 OS=Homo sapiens OX=9606 GN=SMTNL2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 4.218e-21 Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 1624 GKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 G + ++K +LL W T YQ+V + N+S SW+DG+AFCAL+H F+P++FDY+ LS KNF LAF A+ Sbjct: 346 GVASASSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAE 420 HSP 2 Score: 38.891 bits (89), Expect = 4.218e-21 Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 3 Query: 1896 NYAGIEPLIEPGDVNILGS-PDEKCVYTYIQFMYNSLK 2006 N A E LIE D+ ++G PD CV+TY+Q +YN L+ Sbjct: 421 NLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLR 458
BLAST of Cytospin-A vs. UniProt/SwissProt
Match: sp|Q2KI85|SMTL2_BOVIN (Smoothelin-like protein 2 OS=Bos taurus OX=9913 GN=SMTNL2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 4.580e-21 Identity = 34/75 (45.33%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 1624 GKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 G + ++K +LL W T YQ+V + N+S SW+DG+AFCAL+H F+P++FDY+ LS +NF LAF A+ Sbjct: 343 GVASASSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNALSPTQRRQNFELAFTMAE 417 HSP 2 Score: 38.891 bits (89), Expect = 4.580e-21 Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 3 Query: 1896 NYAGIEPLIEPGDVNILGS-PDEKCVYTYIQFMYNSLK 2006 N A E LIE D+ ++G PD CV+TY+Q +YN L+ Sbjct: 418 NLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLR 455
BLAST of Cytospin-A vs. UniProt/SwissProt
Match: sp|Q2KN97|CYTSA_CHICK (Cytospin-A OS=Gallus gallus OX=9031 GN=SPECC1L PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 1.109e-19 Identity = 62/199 (31.16%), Postives = 100/199 (50.25%), Query Frame = 1 Query: 1309 MSASKPIPQM-----STPEIPAKQNISRVSSVREKFENPPAPSFTNKAKTSTKFSEKELNDILNAVLKPEEVMPN--LNRGASNEKNL--------TVPEGRSRKISQQIDPSNKIDPKVGKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAKFIFI 1860 +SASKP+ + S EIP ++++ R SS P P+ ++ S S + +I + P+ P + G ++ + P RSR ++ DP + + + G + ++ LL W +K T+ YQN+ ITN+S SW DGLAFCA++H + P Y L+S D +NFTLAF+ A+ + I Sbjct: 893 ISASKPLATLTDKRPSYAEIPVQEHLLRTSSTSRPASLPRVPAM--ESAKSISVSRRSSEEIKRDISAPDGASPASLMAMGTTSPQLSLSSSPTASVTPTTRSRIREERKDPLSALAREYGG----SKRNALLKWCQKKTEGYQNIDITNFSSSWNDGLAFCAVLHTYLPAHIPYQELNSQDKRRNFTLAFQAAESVGI 1085
BLAST of Cytospin-A vs. TrEMBL
Match: T1ES98 (Calponin-homology (CH) domain-containing protein OS=Helobdella robusta OX=6412 GN=20199448 PE=4 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 7.429e-24 Identity = 43/68 (63.24%), Postives = 55/68 (80.88%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETA 1845 A+K++L+ W + T+EY+NV ITN+S SWADG+AFCALIHHFYPESFDYS L+ + NFTLAF+ A Sbjct: 122 AIKEMLIKWCQMQTKEYENVNITNFSSSWADGMAFCALIHHFYPESFDYSKLNPKNRRGNFTLAFDVA 189 HSP 2 Score: 36.1946 bits (82), Expect = 7.429e-24 Identity = 15/34 (44.12%), Postives = 21/34 (61.76%), Query Frame = 3 Query: 1902 AGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSL 2003 A I PL+E D+ ++ PD KCV+TY+Q Y Sbjct: 193 ANIAPLLEVDDMVMMKVPDWKCVFTYVQSFYRRF 226
BLAST of Cytospin-A vs. TrEMBL
Match: A0A226E3T5 (Smoothelin OS=Folsomia candida OX=158441 GN=Fcan01_12210 PE=4 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.411e-23 Identity = 39/66 (59.09%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 1648 KDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETA 1845 KD+LL W + T++Y+NVKI N+S SW+DGLAFCALIHHFYP++FDY L + NF LAF A Sbjct: 2103 KDILLYWCQCRTRDYENVKIENFSSSWSDGLAFCALIHHFYPDAFDYKSLDPKNRRFNFDLAFRVA 2168 HSP 2 Score: 43.5134 bits (101), Expect = 1.411e-23 Identity = 20/36 (55.56%), Postives = 27/36 (75.00%), Query Frame = 3 Query: 1902 AGIEPLIEPGDVNILGS-PDEKCVYTYIQFMYNSLK 2006 AGI PL++ D+ ++G PD KCV+TY+Q MY SLK Sbjct: 2172 AGIYPLLDTEDMIVMGRRPDWKCVFTYVQSMYRSLK 2207
BLAST of Cytospin-A vs. TrEMBL
Match: A0A4W5RYX6 (Calponin-homology (CH) domain-containing protein OS=Hucho hucho OX=62062 PE=4 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.855e-23 Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 1597 PSNKIDPKVGKITKLA---------LKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 P NK KV + + A +K +LL W T+ Y+NV I N+S SW+DG+AFCAL+H+F+PE+FDYS L++ + NF +AF TA+ Sbjct: 954 PGNKAVAKVNMVQRSASCVVPNANSIKQMLLDWCRAKTRSYENVDIQNFSSSWSDGMAFCALVHNFFPEAFDYSSLTAANRRHNFEVAFSTAE 1046 HSP 2 Score: 44.669 bits (104), Expect = 1.855e-23 Identity = 21/44 (47.73%), Postives = 28/44 (63.64%), Query Frame = 3 Query: 1902 AGIEPLIEPGDVNILGS-PDEKCVYTYIQFMYNSLKSHPRNSAK 2030 A PL+E D+ I+G PD KCV+TY+Q + N L+ H N AK Sbjct: 1049 ANCMPLLEVEDMMIMGKKPDSKCVFTYVQSLVNHLRRHEMNLAK 1092
BLAST of Cytospin-A vs. TrEMBL
Match: A0A1S3PGI1 (smoothelin-like isoform X6 OS=Salmo salar OX=8030 GN=LOC106585267 PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.266e-23 Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 1597 PSNKIDPKVGKITKLA---------LKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 P NK KV + + A +K +LL W T+ Y+NV I N+S SW+DG+AFCAL+H+F+PE+FDYS L++ + NF +AF TA+ Sbjct: 797 PGNKAVAKVNMVQRSASCVVPNANSIKQMLLDWCRAKTRSYENVDIQNFSSSWSDGMAFCALVHNFFPEAFDYSSLTAANRRHNFEVAFSTAE 889 HSP 2 Score: 45.0542 bits (105), Expect = 2.266e-23 Identity = 24/60 (40.00%), Postives = 33/60 (55.00%), Query Frame = 3 Query: 1854 FYILFSKIFIISCRNYAGIEPLIEPGDVNILG-SPDEKCVYTYIQFMYNSLKSHPRNSAK 2030 F + FS + A PL+E D+ I+G PD KCV+TY+Q + N L+ H N AK Sbjct: 881 FEVAFS-----TAEECANCMPLLEVEDMMIMGRKPDSKCVFTYVQSLVNHLRRHEMNLAK 935
BLAST of Cytospin-A vs. TrEMBL
Match: A0A1S3PGP7 (smoothelin-like isoform X4 OS=Salmo salar OX=8030 GN=LOC106585267 PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.798e-23 Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 1597 PSNKIDPKVGKITKLA---------LKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 P NK KV + + A +K +LL W T+ Y+NV I N+S SW+DG+AFCAL+H+F+PE+FDYS L++ + NF +AF TA+ Sbjct: 986 PGNKAVAKVNMVQRSASCVVPNANSIKQMLLDWCRAKTRSYENVDIQNFSSSWSDGMAFCALVHNFFPEAFDYSSLTAANRRHNFEVAFSTAE 1078 HSP 2 Score: 44.2838 bits (103), Expect = 2.798e-23 Identity = 21/44 (47.73%), Postives = 28/44 (63.64%), Query Frame = 3 Query: 1902 AGIEPLIEPGDVNILG-SPDEKCVYTYIQFMYNSLKSHPRNSAK 2030 A PL+E D+ I+G PD KCV+TY+Q + N L+ H N AK Sbjct: 1081 ANCMPLLEVEDMMIMGRKPDSKCVFTYVQSLVNHLRRHEMNLAK 1124
BLAST of Cytospin-A vs. Ensembl Cavefish
Match: smtnl (smoothelin like 2 [Source:NCBI gene;Acc:103036153]) HSP 1 Score: 88.9669 bits (219), Expect = 4.962e-23 Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 ++K +LL W T YQN+ I N+S SW+DG+AFCAL+H F+P FDY+ LS D NF LAF TA+ Sbjct: 395 SIKQILLEWCRSKTIGYQNIDIQNFSSSWSDGMAFCALVHSFFPTEFDYNALSPVDRKHNFELAFSTAE 463 HSP 2 Score: 39.2762 bits (90), Expect = 4.962e-23 Identity = 20/52 (38.46%), Postives = 31/52 (59.62%), Query Frame = 3 Query: 1854 FYILFSKIFIISCRNYAGIEPLIEPGDVNILG-SPDEKCVYTYIQFMYNSLK 2006 F + FS + +AG + LIE D+ ++G PD CV+TY+Q +YN L+ Sbjct: 455 FELAFS-----TAEKHAGCDRLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLR 501
BLAST of Cytospin-A vs. Ensembl Cavefish
Match: ENSAMXT00000056105.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000095.1:180394:186664:-1 gene:ENSAMXG00000031006.1 transcript:ENSAMXT00000056105.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 93.2041 bits (230), Expect = 1.320e-21 Identity = 35/68 (51.47%), Postives = 54/68 (79.41%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETA 1845 ++K +LL W T++Y+NV I N+S SW+DG+AFCAL+H+F+PE+FDY+ LS ++ +NF +AF+TA Sbjct: 200 SIKQMLLDWCRAKTRDYENVDIQNFSSSWSDGMAFCALVHNFFPEAFDYAALSPSNRRQNFEVAFKTA 267 HSP 2 Score: 30.4166 bits (67), Expect = 1.320e-21 Identity = 13/29 (44.83%), Postives = 18/29 (62.07%), Query Frame = 3 Query: 1917 LIEPGDVNILGSPDEKCVYTYIQFMYNSL 2003 L++ D+ + PD KCVYTY+Q Y L Sbjct: 275 LLDVDDMVRMREPDWKCVYTYLQEFYRGL 303
BLAST of Cytospin-A vs. Ensembl Cavefish
Match: smtnl1 (smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]) HSP 1 Score: 96.6709 bits (239), Expect = 1.225e-20 Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 1621 VGKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAKFI 1854 VG ++K +L W T++Y+ V I N+S SW+DGLAFCAL+H F+P +FD+S L +++ KNFTLAF TA+ + Sbjct: 254 VGVSGGASIKQKILQWCSNKTRDYEGVSIENFSSSWSDGLAFCALVHRFFPTAFDFSTLKASEREKNFTLAFSTAETL 331
BLAST of Cytospin-A vs. Ensembl Cavefish
Match: smtnl1 (smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]) HSP 1 Score: 95.9005 bits (237), Expect = 1.431e-20 Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 1621 VGKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAKFI 1854 VG ++K +L W T++Y+ V I N+S SW+DGLAFCAL+H F+P +FD+S L +++ KNFTLAF TA+ + Sbjct: 217 VGVSGGASIKQKILQWCSNKTRDYEGVSIENFSSSWSDGLAFCALVHRFFPTAFDFSTLKASEREKNFTLAFSTAETL 294
BLAST of Cytospin-A vs. Ensembl Cavefish
Match: smtnl1 (smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]) HSP 1 Score: 96.2857 bits (238), Expect = 1.568e-20 Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 1621 VGKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAKFI 1854 VG ++K +L W T++Y+ V I N+S SW+DGLAFCAL+H F+P +FD+S L +++ KNFTLAF TA+ + Sbjct: 254 VGVSGGASIKQKILQWCSNKTRDYEGVSIENFSSSWSDGLAFCALVHRFFPTAFDFSTLKASEREKNFTLAFSTAETL 331
BLAST of Cytospin-A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008014.1 (pep scaffold:Pmarinus_7.0:GL480769:7574:15080:-1 gene:ENSPMAG00000007250.1 transcript:ENSPMAT00000008014.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 77.411 bits (189), Expect = 3.363e-19 Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1 Query: 1654 LLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 L L W + T+ Y NV + N+S SW DG+AFCAL+H ++PE+FD++ LS +P NF LAF A+ Sbjct: 23 LTLEWCKTRTENYANVSVRNFSSSWCDGMAFCALVHSYFPEAFDFAELSPQNPRHNFQLAFTCAE 87 HSP 2 Score: 35.4242 bits (80), Expect = 3.363e-19 Identity = 15/33 (45.45%), Postives = 25/33 (75.76%), Query Frame = 3 Query: 1902 AGIEPLIEPGDVNILGS-PDEKCVYTYIQFMYN 1997 A +PL++ D+ I+G+ PD KCV+TY+Q ++N Sbjct: 90 AHCDPLLDVEDMIIMGNRPDSKCVFTYVQSLFN 122
BLAST of Cytospin-A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009649.1 (pep scaffold:Pmarinus_7.0:GL478928:16819:21705:-1 gene:ENSPMAG00000008722.1 transcript:ENSPMAT00000009649.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 70.8626 bits (172), Expect = 2.752e-18 Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 1 Query: 1693 QNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 QNV I N+S SW DG+AFCAL+H ++PE+FD++ LS +P NF LAF A+ Sbjct: 1 QNVTIKNFSSSWCDGMAFCALVHSYFPEAFDFAKLSPQNPRHNFQLAFTCAE 52 HSP 2 Score: 39.2762 bits (90), Expect = 2.752e-18 Identity = 17/40 (42.50%), Postives = 27/40 (67.50%), Query Frame = 3 Query: 1902 AGIEPLIEPGDVNILGS-PDEKCVYTYIQFMYNSLKSHPR 2018 A +PL++ D+ ++G PD KCV+TY+Q +YN L+ R Sbjct: 55 AHCDPLLDVDDMIMMGKKPDSKCVFTYVQSLYNKLRRLER 94
BLAST of Cytospin-A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000684.1 (pep scaffold:Pmarinus_7.0:GL483163:49540:93186:-1 gene:ENSPMAG00000000623.1 transcript:ENSPMAT00000000684.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 69.707 bits (169), Expect = 1.069e-14 Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = 1 Query: 1648 KDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 K+ LL+W ++ T Y+NV + N+ SW DGLAF ALIH P+ DY L +DP+ N AFE A+ Sbjct: 116 KEGLLLWCQRKTAPYKNVNVQNFHTSWKDGLAFNALIHRHRPDLIDYDKLRKDDPIGNLNNAFEVAE 182 HSP 2 Score: 28.1054 bits (61), Expect = 1.069e-14 Identity = 15/53 (28.30%), Postives = 26/53 (49.06%), Query Frame = 3 Query: 1899 YAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKSHPRNSAKRAENS*NYV 2057 Y I +++ D+ PDEK + TY+ Y H + A++AE + N + Sbjct: 184 YLDIPKMLDAEDIVNTARPDEKAIMTYVSCYY-----HAFSGAQKAETAANRI 231
BLAST of Cytospin-A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009295.1 (pep scaffold:Pmarinus_7.0:GL479988:2885:20778:1 gene:ENSPMAG00000008383.1 transcript:ENSPMAT00000009295.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 69.3218 bits (168), Expect = 1.337e-14 Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = 1 Query: 1648 KDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 K+ LL+W ++ T Y+NV + N+ SW DGLAF ALIH P+ DY L +DP+ N AFE A+ Sbjct: 112 KEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPDLIDYEKLRKDDPITNLNNAFEVAE 178 HSP 2 Score: 28.1054 bits (61), Expect = 1.337e-14 Identity = 15/53 (28.30%), Postives = 26/53 (49.06%), Query Frame = 3 Query: 1899 YAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKSHPRNSAKRAENS*NYV 2057 Y I +++ D+ PDEK + TY+ Y H + A++AE + N + Sbjct: 180 YLDIPKMLDAEDIVGTARPDEKAIMTYVSCYY-----HAFSGAQKAETAANRI 227
BLAST of Cytospin-A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004049.1 (pep scaffold:Pmarinus_7.0:GL476488:489896:554954:1 gene:ENSPMAG00000003699.1 transcript:ENSPMAT00000004049.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 66.2402 bits (160), Expect = 2.087e-12 Identity = 30/67 (44.78%), Postives = 39/67 (58.21%), Query Frame = 1 Query: 1648 KDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 KD LL+W + T Y NV++ N++ SW DGLAF ALIH P+ D+ L DP N AF A+ Sbjct: 128 KDALLLWCQMKTAGYPNVRVHNFTTSWRDGLAFNALIHKHRPDLIDFDALDPADPYGNMQTAFNVAE 194 HSP 2 Score: 23.8682 bits (50), Expect = 2.087e-12 Identity = 10/26 (38.46%), Postives = 16/26 (61.54%), Query Frame = 3 Query: 1905 GIEPLIEPGDVNILGSPDEKCVYTYI 1982 G+ L++ D+ + PDEK V TY+ Sbjct: 198 GLTQLLDAEDIAV-EHPDEKSVITYV 222
BLAST of Cytospin-A vs. Ensembl Nematostella
Match: EDO36878 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SHE7]) HSP 1 Score: 79.337 bits (194), Expect = 3.084e-16 Identity = 34/73 (46.58%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAKFIFI 1860 ++ L+L W + T++Y V+I N+S S+ DGLAFCALIH F P+ FD+S L+ D N+TLA ET + + I Sbjct: 174 SVSSLVLTWCQDVTKDYPGVEIKNFSTSFYDGLAFCALIHKFNPDKFDFSELTPEDRRHNWTLALETGESVGI 246
BLAST of Cytospin-A vs. Ensembl Nematostella
Match: EDO36877 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SHE6]) HSP 1 Score: 72.4034 bits (176), Expect = 6.997e-16 Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 1 Query: 1636 KLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 ++++ L+L W + T+ Y+ V ITN+S S+A+GLAFCALIH F P+ FD+ L + NF LAFET + Sbjct: 1 QMSVSSLILTWCKDVTEGYKGVNITNFSGSFANGLAFCALIHKFNPDKFDFDSLDPENRHYNFKLAFETGE 71
BLAST of Cytospin-A vs. Ensembl Nematostella
Match: ALPHA-ACTININ (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S4X0]) HSP 1 Score: 73.559 bits (179), Expect = 1.121e-15 Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 1 Query: 1648 KDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 KD LL+W ++ T Y+NV + N++ S+ DGLAFCALIH P+ DY L DPL N AF+ A+ Sbjct: 143 KDGLLLWCQRKTAPYKNVSVKNFTTSFKDGLAFCALIHRHRPDLIDYDSLRKEDPLYNLNKAFDVAE 209 HSP 2 Score: 28.4906 bits (62), Expect = 1.121e-15 Identity = 17/58 (29.31%), Postives = 30/58 (51.72%), Query Frame = 3 Query: 1866 FSKIFIISCRNYAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKSHPR--NSAKR 2033 +K F ++ Y I +++P D+ PDE+ V TY+ Y++ S + +AKR Sbjct: 201 LNKAFDVA-EQYLDIPRMLDPEDMVETERPDERAVMTYVSSYYHAFTSSQQADTAAKR 257
BLAST of Cytospin-A vs. Ensembl Nematostella
Match: EDO36124 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJI6]) HSP 1 Score: 69.3218 bits (168), Expect = 2.566e-14 Identity = 30/63 (47.62%), Postives = 41/63 (65.08%), Query Frame = 1 Query: 1657 LLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETA 1845 +L W + T+ ++ V+I N++ SWADGLA CAL H+F PE Y L D +N+TLAFE A Sbjct: 1 MLEWCRRRTRGHEGVEIQNFTTSWADGLAMCALFHNFSPELIPYETLDPKDRTRNWTLAFEAA 63
BLAST of Cytospin-A vs. Ensembl Nematostella
Match: EDO37708 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SF38]) HSP 1 Score: 70.0922 bits (170), Expect = 4.189e-14 Identity = 35/84 (41.67%), Postives = 48/84 (57.14%), Query Frame = 1 Query: 1603 NKIDPKVG--KITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 N +D ++ K+ L+ KD LL W +K TQ Y V + N+S SW DG AF A+IH + P+ D+S LS P N AF A+ Sbjct: 142 NDLDVEIAGEKVQDLSAKDALLHWSKKVTQGYPKVDVKNFSSSWRDGFAFNAIIHRYRPDLVDFSKLSKTSPEANIEYAFHVAE 225 HSP 2 Score: 26.5646 bits (57), Expect = 4.189e-14 Identity = 11/33 (33.33%), Postives = 18/33 (54.55%), Query Frame = 3 Query: 1917 LIEPGDVNILGSPDEKCVYTYIQFMYNSLKSHP 2015 L++ DV + +PDEK + TY+ +Y P Sbjct: 233 LLDVEDVVVSENPDEKSIMTYVASLYEVFPRTP 265
BLAST of Cytospin-A vs. Ensembl Medaka
Match: ENSORLT00000042079.1 (smoothelin [Source:NCBI gene;Acc:101173151]) HSP 1 Score: 90.5077 bits (223), Expect = 2.617e-23 Identity = 37/93 (39.78%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 1597 PSNKIDPKVGKITKL---------ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 P N++ KV ++ + ++K +LL W T+ Y++V I N+S SW+DG+AFCAL+H F+P++FDYS LS ++ NF +AF A+ Sbjct: 783 PFNQVVAKVNRVQRSTSFGVPNANSIKQMLLDWCRAKTRSYEHVDIQNFSSSWSDGMAFCALVHSFFPDAFDYSCLSPSNRRHNFEVAFSAAE 875 HSP 2 Score: 38.891 bits (89), Expect = 2.617e-23 Identity = 16/32 (50.00%), Postives = 24/32 (75.00%), Query Frame = 3 Query: 1914 PLIEPGDVNILGS-PDEKCVYTYIQFMYNSLK 2006 PL+E D+ I+G+ PD KCV+TY+Q + N L+ Sbjct: 882 PLLEVEDMMIMGNKPDSKCVFTYVQSLVNHLR 913
BLAST of Cytospin-A vs. Ensembl Medaka
Match: smtna (smoothelin-like protein 1 [Source:NCBI gene;Acc:101166813]) HSP 1 Score: 88.9669 bits (219), Expect = 9.537e-23 Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 1 Query: 1645 LKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 +K +LL W T+ Y+ V I N+S SW DG+AFCAL+H F+P++F+YS+L+ N P NF LAF TA+ Sbjct: 124 VKQMLLDWCRAKTEPYEGVDIQNFSSSWKDGIAFCALVHRFFPDAFEYSILNPNKPRDNFQLAFSTAE 191 HSP 2 Score: 38.5058 bits (88), Expect = 9.537e-23 Identity = 20/50 (40.00%), Postives = 26/50 (52.00%), Query Frame = 3 Query: 1854 FYILFSKIFIISCRNYAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSL 2003 F + FS + AG PL++ D+ + PD KCVYTYIQ Y L Sbjct: 183 FQLAFS-----TAEKMAGCPPLLDADDLVRMQEPDWKCVYTYIQEFYRCL 227
BLAST of Cytospin-A vs. Ensembl Medaka
Match: smtnl1 (smoothelin like 1 [Source:NCBI gene;Acc:101166638]) HSP 1 Score: 93.5893 bits (231), Expect = 5.122e-22 Identity = 37/74 (50.00%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 1633 TKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAKFI 1854 T ++K +L W T+ Y++V I N+S SW DGLAFCALIH F+P++FDY+ L+ + KNFTLAF+TA+ + Sbjct: 228 TGASIKQKILQWCRSKTRNYKDVNIENFSSSWCDGLAFCALIHRFFPDAFDYNSLTPQEREKNFTLAFQTAESL 301 HSP 2 Score: 31.187 bits (69), Expect = 5.122e-22 Identity = 15/31 (48.39%), Postives = 23/31 (74.19%), Query Frame = 3 Query: 1914 PLIEPGDVNILG-SPDEKCVYTYIQFMYNSL 2003 PL+E D+ ++G SPD CV+TY+Q + +SL Sbjct: 306 PLLEVADMIMMGKSPDPMCVFTYVQSLCHSL 336
BLAST of Cytospin-A vs. Ensembl Medaka
Match: smtnl1 (smoothelin like 1 [Source:NCBI gene;Acc:101166638]) HSP 1 Score: 93.5893 bits (231), Expect = 5.122e-22 Identity = 37/74 (50.00%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 1633 TKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAKFI 1854 T ++K +L W T+ Y++V I N+S SW DGLAFCALIH F+P++FDY+ L+ + KNFTLAF+TA+ + Sbjct: 228 TGASIKQKILQWCRSKTRNYKDVNIENFSSSWCDGLAFCALIHRFFPDAFDYNSLTPQEREKNFTLAFQTAESL 301 HSP 2 Score: 31.187 bits (69), Expect = 5.122e-22 Identity = 15/31 (48.39%), Postives = 23/31 (74.19%), Query Frame = 3 Query: 1914 PLIEPGDVNILG-SPDEKCVYTYIQFMYNSL 2003 PL+E D+ ++G SPD CV+TY+Q + +SL Sbjct: 306 PLLEVADMIMMGKSPDPMCVFTYVQSLCHSL 336
BLAST of Cytospin-A vs. Ensembl Medaka
Match: smtnl (smoothelin like 2 [Source:NCBI gene;Acc:101158374]) HSP 1 Score: 83.5741 bits (205), Expect = 3.028e-21 Identity = 34/68 (50.00%), Postives = 46/68 (67.65%), Query Frame = 1 Query: 1645 LKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 +K +LL W T YQN+ I N+S SW++G+AFCAL+H F+P FDY+ LS + NF LAF TA+ Sbjct: 426 IKQILLEWCRSKTIGYQNIDIQNFSSSWSNGMAFCALVHSFFPAEFDYNSLSPANRRHNFELAFATAE 493 HSP 2 Score: 38.5058 bits (88), Expect = 3.028e-21 Identity = 18/36 (50.00%), Postives = 25/36 (69.44%), Query Frame = 3 Query: 1902 AGIEPLIEPGDVNILG-SPDEKCVYTYIQFMYNSLK 2006 AG + LIE D+ I+G PD CV+TY+Q +YN L+ Sbjct: 496 AGCDRLIEVDDMMIMGHKPDPMCVFTYVQSLYNHLR 531
BLAST of Cytospin-A vs. Planmine SMEST
Match: SMESG000002849.1 (SMESG000002849.1) HSP 1 Score: 955.666 bits (2469), Expect = 0.000e+0 Identity = 514/514 (100.00%), Postives = 514/514 (100.00%), Query Frame = 1 Query: 307 MSNFLDNKTDAEIEEIYNGATMEDLQSMLTQEKCXXXXXXXXXXXXXXXXXXXXXXXXLDXXXXXXXXXXXXXIPNRVQESEIHLASKKDGDSTLKQLNEKRKQLHDAADLAQRKELRKEIQILENQCNKQPNTINQNARTLLNTESNQTLNSCKEKPEAEDMHSSSKNFHTDTKDQVTSDNKPKFNFIKTPEKDPHPIKKNENEFRNVSNKPSDDKNNKMSAACLENSTKVKNNQTDCVDTKNLTEDFPKNQKPISERSKISIIDKLAGKDQKPTDKRNSISTPDGNTSKYPPPPKETSINNSFHNSQKFEPQSRSVNPSTDSIIKQIPLKDEMSASKPIPQMSTPEIPAKQNISRVSSVREKFENPPAPSFTNKAKTSTKFSEKELNDILNAVLKPEEVMPNLNRGASNEKNLTVPEGRSRKISQQIDPSNKIDPKVGKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 MSNFLDNKTDAEIEEIYNGATMEDLQSMLTQEKCLNRRRLLRKVLRSKSSNSSDISNNLDTKENTNETNQTKTIPNRVQESEIHLASKKDGDSTLKQLNEKRKQLHDAADLAQRKELRKEIQILENQCNKQPNTINQNARTLLNTESNQTLNSCKEKPEAEDMHSSSKNFHTDTKDQVTSDNKPKFNFIKTPEKDPHPIKKNENEFRNVSNKPSDDKNNKMSAACLENSTKVKNNQTDCVDTKNLTEDFPKNQKPISERSKISIIDKLAGKDQKPTDKRNSISTPDGNTSKYPPPPKETSINNSFHNSQKFEPQSRSVNPSTDSIIKQIPLKDEMSASKPIPQMSTPEIPAKQNISRVSSVREKFENPPAPSFTNKAKTSTKFSEKELNDILNAVLKPEEVMPNLNRGASNEKNLTVPEGRSRKISQQIDPSNKIDPKVGKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK Sbjct: 1 MSNFLDNKTDAEIEEIYNGATMEDLQSMLTQEKCLNRRRLLRKVLRSKSSNSSDISNNLDTKENTNETNQTKTIPNRVQESEIHLASKKDGDSTLKQLNEKRKQLHDAADLAQRKELRKEIQILENQCNKQPNTINQNARTLLNTESNQTLNSCKEKPEAEDMHSSSKNFHTDTKDQVTSDNKPKFNFIKTPEKDPHPIKKNENEFRNVSNKPSDDKNNKMSAACLENSTKVKNNQTDCVDTKNLTEDFPKNQKPISERSKISIIDKLAGKDQKPTDKRNSISTPDGNTSKYPPPPKETSINNSFHNSQKFEPQSRSVNPSTDSIIKQIPLKDEMSASKPIPQMSTPEIPAKQNISRVSSVREKFENPPAPSFTNKAKTSTKFSEKELNDILNAVLKPEEVMPNLNRGASNEKNLTVPEGRSRKISQQIDPSNKIDPKVGKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 514 HSP 2 Score: 112.464 bits (280), Expect = 1.455e-25 Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 3 Query: 1887 SCRNYAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKSHPRNSAKRAENS 2045 + +NYAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKSHPRNSAKRAENS Sbjct: 512 TAKNYAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKSHPRNSAKRAENS 564
BLAST of Cytospin-A vs. Planmine SMEST
Match: SMESG000002849.1 (SMESG000002849.1) HSP 1 Score: 936.406 bits (2419), Expect = 0.000e+0 Identity = 514/551 (93.28%), Postives = 514/551 (93.28%), Query Frame = 1 Query: 307 MSNFLDNKTDAEIEEIYNGATMEDLQSMLTQEKCXXXXXXXXXXXXXXXXXXXXXXXXLDXXXXXXXXXXXXXIPNRVQESEIHLASKKDGDSTLKQLNEKRKQLHDAADLAQRKELRKEIQILENQCNKQPNTINQNARTLLNTESNQTLNSCKEKPEAEDMHSSSKNFHTDTKDQVTSDNKPKFNFIKTPEKDPHPIKKNENEFRNVSNKPSDDKNNKMSAACLENSTKVKNNQTDCVDTKNLTEDFPKNQKPISERSKISIIDKLAGKDQKPTDKRNSISTPDGNTSKYPPPPKETSINNSFHNSQKFEPQSRSVNPSTDSIIKQIPLKDEMSASKPIPQMSTPEIPAKQNISRVSSVREKFENPPAPSFTNKAKTSTKFSEKELNDILNAVLKPEEVMPNLNRGASNEKNLTVPEGRSRKISQQ-------------------------------------IDPSNKIDPKVGKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 MSNFLDNKTDAEIEEIYNGATMEDLQSMLTQEKCLNRRRLLRKVLRSKSSNSSDISNNLDTKENTNETNQTKTIPNRVQESEIHLASKKDGDSTLKQLNEKRKQLHDAADLAQRKELRKEIQILENQCNKQPNTINQNARTLLNTESNQTLNSCKEKPEAEDMHSSSKNFHTDTKDQVTSDNKPKFNFIKTPEKDPHPIKKNENEFRNVSNKPSDDKNNKMSAACLENSTKVKNNQTDCVDTKNLTEDFPKNQKPISERSKISIIDKLAGKDQKPTDKRNSISTPDGNTSKYPPPPKETSINNSFHNSQKFEPQSRSVNPSTDSIIKQIPLKDEMSASKPIPQMSTPEIPAKQNISRVSSVREKFENPPAPSFTNKAKTSTKFSEKELNDILNAVLKPEEVMPNLNRGASNEKNLTVPEGRSRKISQQ IDPSNKIDPKVGKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK Sbjct: 1 MSNFLDNKTDAEIEEIYNGATMEDLQSMLTQEKCLNRRRLLRKVLRSKSSNSSDISNNLDTKENTNETNQTKTIPNRVQESEIHLASKKDGDSTLKQLNEKRKQLHDAADLAQRKELRKEIQILENQCNKQPNTINQNARTLLNTESNQTLNSCKEKPEAEDMHSSSKNFHTDTKDQVTSDNKPKFNFIKTPEKDPHPIKKNENEFRNVSNKPSDDKNNKMSAACLENSTKVKNNQTDCVDTKNLTEDFPKNQKPISERSKISIIDKLAGKDQKPTDKRNSISTPDGNTSKYPPPPKETSINNSFHNSQKFEPQSRSVNPSTDSIIKQIPLKDEMSASKPIPQMSTPEIPAKQNISRVSSVREKFENPPAPSFTNKAKTSTKFSEKELNDILNAVLKPEEVMPNLNRGASNEKNLTVPEGRSRKISQQNIIMMIPQMKKKAQIARSSVQVKKEQLLIFCQLNTQEIDPSNKIDPKVGKITKLALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 551 HSP 2 Score: 112.464 bits (280), Expect = 1.657e-25 Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 3 Query: 1887 SCRNYAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKSHPRNSAKRAENS 2045 + +NYAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKSHPRNSAKRAENS Sbjct: 549 TAKNYAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKSHPRNSAKRAENS 601
BLAST of Cytospin-A vs. Planmine SMEST
Match: SMESG000002849.1 (SMESG000002849.1) HSP 1 Score: 930.243 bits (2403), Expect = 0.000e+0 Identity = 506/517 (97.87%), Postives = 508/517 (98.26%), Query Frame = 1 Query: 307 MSNFLDNKTDAEIEEIYNGATMEDLQSMLTQEKCXXXXXXXXXXXXXXXXXXXXXXXXLDXXXXXXXXXXXXXIPNRVQESEIHLASKKDGDSTLKQLNEKRKQLHDAADLAQRKELRKEIQILENQCNKQPNTINQNARTLLNTESNQTLNSCKEKPEAEDMHSSSKNFHTDTKDQVTSDNKPKFNFIKTPEKDPHPIKKNENEFRNVSNKPSDDKNNKMSAACLENSTKVKNNQTDCVDTKNLTEDFPKNQKPISERSKISIIDKLAGKDQKPTDKRNSISTPDGNTSKYPPPPKETSINNSFHNSQKFEPQSRSVNPSTDSIIKQIPLKDEMSASKPIPQMSTPEIPAKQNISRVSSVREKFENPPAPSFTNKAKTSTKFSEKELNDILNAVLKPEEVMPNLNRGASNEKNLTVPEGRSRKISQQIDPSNKIDPKVGKITKLALKDLLLIWIEKNTQEYQNVKITNYSK---SWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 1848 MSNFLDNKTDAEIEEIYNGATMEDLQSMLTQEKCLNRRRLLRKVLRSKSSNSSDISNNLDTKENTNETNQTKTIPNRVQESEIHLASKKDGDSTLKQLNEKRKQLHDAADLAQRKELRKEIQILENQCNKQPNTINQNARTLLNTESNQTLNSCKEKPEAEDMHSSSKNFHTDTKDQVTSDNKPKFNFIKTPEKDPHPIKKNENEFRNVSNKPSDDKNNKMSAACLENSTKVKNNQTDCVDTKNLTEDFPKNQKPISERSKISIIDKLAGKDQKPTDKRNSISTPDGNTSKYPPPPKETSINNSFHNSQKFEPQSRSVNPSTDSIIKQIPLKDEMSASKPIPQMSTPEIPAKQNISRVSSVREKFENPPAPSFTNKAKTSTKFSEKELNDILNAVLKPEEVMPNLNRGASNEKNLTVPEGRSRKISQQIDPSNKIDPKVGKITKLALKDLLLIWIEKNTQEYQ + + K SWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK Sbjct: 1 MSNFLDNKTDAEIEEIYNGATMEDLQSMLTQEKCLNRRRLLRKVLRSKSSNSSDISNNLDTKENTNETNQTKTIPNRVQESEIHLASKKDGDSTLKQLNEKRKQLHDAADLAQRKELRKEIQILENQCNKQPNTINQNARTLLNTESNQTLNSCKEKPEAEDMHSSSKNFHTDTKDQVTSDNKPKFNFIKTPEKDPHPIKKNENEFRNVSNKPSDDKNNKMSAACLENSTKVKNNQTDCVDTKNLTEDFPKNQKPISERSKISIIDKLAGKDQKPTDKRNSISTPDGNTSKYPPPPKETSINNSFHNSQKFEPQSRSVNPSTDSIIKQIPLKDEMSASKPIPQMSTPEIPAKQNISRVSSVREKFENPPAPSFTNKAKTSTKFSEKELNDILNAVLKPEEVMPNLNRGASNEKNLTVPEGRSRKISQQIDPSNKIDPKVGKITKLALKDLLLIWIEKNTQEYQLISMILTFKTYLSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETAK 517 HSP 2 Score: 112.079 bits (279), Expect = 1.634e-25 Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 3 Query: 1887 SCRNYAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKSHPRNSAKRAENS 2045 + +NYAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKSHPRNSAKRAENS Sbjct: 515 TAKNYAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKSHPRNSAKRAENS 567
BLAST of Cytospin-A vs. Planmine SMEST
Match: SMESG000039310.1 (SMESG000039310.1) HSP 1 Score: 80.4925 bits (197), Expect = 9.766e-24 Identity = 39/75 (52.00%), Postives = 55/75 (73.33%), Query Frame = 1 Query: 1648 KDLLLIWIEKNTQEYQ--NVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETA-KFIFIY 1863 KD++L++ + NT+EY+ V + N S SW+DGLAFCALIHHF+PE+FD+S L+ + NF LAF +A K+ IY Sbjct: 341 KDIILMFCKLNTEEYEPYGVCVDNLSSSWSDGLAFCALIHHFHPEAFDFSKLNKLNRKFNFELAFTSADKYADIY 415 HSP 2 Score: 49.6766 bits (117), Expect = 9.766e-24 Identity = 20/48 (41.67%), Postives = 30/48 (62.50%), Query Frame = 3 Query: 1887 SCRNYAGIEPLIEPGDVNILGSPDEKCVYTYIQFMYNSLKSHPRNSAK 2030 S YA I PL++ D+ I+ PD KC++TY+Q Y + ++HP N K Sbjct: 407 SADKYADIYPLLDIDDMMIMEKPDWKCIFTYVQCFYKAFRTHPSNRLK 454
BLAST of Cytospin-A vs. Planmine SMEST
Match: SMESG000025457.1 (SMESG000025457.1) HSP 1 Score: 91.2781 bits (225), Expect = 5.930e-21 Identity = 37/68 (54.41%), Postives = 52/68 (76.47%), Query Frame = 1 Query: 1642 ALKDLLLIWIEKNTQEYQNVKITNYSKSWADGLAFCALIHHFYPESFDYSVLSSNDPLKNFTLAFETA 1845 ++K LLL W + T++Y V+I ++S SWA+G+AFCALIHHF+PE+FD++ L + KN TLAFETA Sbjct: 216 SIKQLLLEWCIRQTKDYPGVEIKDFSGSWANGMAFCALIHHFFPEAFDFNQLKPGERSKNLTLAFETA 283 HSP 2 Score: 30.0314 bits (66), Expect = 5.930e-21 Identity = 14/41 (34.15%), Postives = 22/41 (53.66%), Query Frame = 3 Query: 1887 SCRNYAGIEPLIEPGDVNILG-SPDEKCVYTYIQFMYNSLK 2006 + A I PL++ D+ ++ PD KCV+ YIQ Y + Sbjct: 282 TAEKLADISPLLDVKDMLMMKDRPDWKCVFCYIQCFYKRFR 322 The following BLAST results are available for this feature:
BLAST of Cytospin-A vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Cytospin-A vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Cytospin-A vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Cytospin-A vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Cytospin-A vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Cytospin-A vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Cytospin-A vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Cytospin-A vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Cytospin-A vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Cytospin-A vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Cytospin-A vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Cytospin-A vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Cytospin-A vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Cytospin-A vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30016941 ID=SMED30016941|Name=Cytospin-A|organism=Schmidtea mediterranea sexual|type=transcript|length=2284bpback to top protein sequence of SMED30016941-orf-1 >SMED30016941-orf-1 ID=SMED30016941-orf-1|Name=SMED30016941-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=526bp MSNFLDNKTDAEIEEIYNGATMEDLQSMLTQEKCLNRRRLLRKVLRSKSSback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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