fer3l-1 protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30016826 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 15
Homology
BLAST of fer3l-1 protein vs. Ensembl Human
Match: FERD3L (Fer3 like bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:16660]) HSP 1 Score: 88.1965 bits (217), Expect = 8.522e-20 Identity = 54/69 (78.26%), Postives = 62/69 (89.86%), Query Frame = 2 Query: 1490 NKPKRKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLN 1696 +PKRKR+ T AQR+AANIRER+RM++LNEAFD LR++VPTFAYEKRLSRIETLRLAI YI FMTELL Sbjct: 90 GRPKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLE 158
BLAST of fer3l-1 protein vs. Ensembl Human
Match: PTF1A (pancreas associated transcription factor 1a [Source:HGNC Symbol;Acc:HGNC:23734]) HSP 1 Score: 62.3882 bits (150), Expect = 7.702e-10 Identity = 26/45 (57.78%), Postives = 36/45 (80.00%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLN 1696 M S+N+AF+ LR +PT YEKRLS+++TLRLAI YI F++EL+ Sbjct: 176 MQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQ 220
BLAST of fer3l-1 protein vs. Ensembl Human
Match: NEUROD1 (neuronal differentiation 1 [Source:HGNC Symbol;Acc:HGNC:7762]) HSP 1 Score: 57.7658 bits (138), Expect = 2.768e-8 Identity = 28/56 (50.00%), Postives = 41/56 (73.21%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL-NGKNADNISLV 1726 M+ LN A D+LRK VP ++ ++LS+IETLRLA YI ++E+L +GK+ D +S V Sbjct: 114 MHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFV 169
BLAST of fer3l-1 protein vs. Ensembl Human
Match: NEUROD6 (neuronal differentiation 6 [Source:HGNC Symbol;Acc:HGNC:13804]) HSP 1 Score: 55.0694 bits (131), Expect = 1.601e-7 Identity = 27/56 (48.21%), Postives = 40/56 (71.43%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLN-GKNADNISLV 1726 M+ LN+A D+LRK VP ++ ++LS+IETLRLA YI ++E+L GK D ++ V Sbjct: 107 MHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRIGKRPDLLTFV 162
BLAST of fer3l-1 protein vs. Ensembl Human
Match: NEUROD2 (neuronal differentiation 2 [Source:HGNC Symbol;Acc:HGNC:7763]) HSP 1 Score: 55.0694 bits (131), Expect = 2.481e-7 Identity = 28/56 (50.00%), Postives = 40/56 (71.43%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL-NGKNADNISLV 1726 M+ LN A D+LRK VP ++ ++LS+IETLRLA YI ++E+L +GK D +S V Sbjct: 134 MHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKRPDLVSYV 189
BLAST of fer3l-1 protein vs. Ensembl Celegans
Match: hlh-13 (Helix-loop-helix protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q20561]) HSP 1 Score: 50.447 bits (119), Expect = 2.723e-7 Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 M S+N AF LR +PTF YEKRLS+I+TL LAI YI + ++L Sbjct: 54 MCSINVAFIELRNYIPTFPYEKRLSKIDTLNLAIAYINMLDDVL 97
BLAST of fer3l-1 protein vs. Ensembl Celegans
Match: hlh-15 (Helix Loop Helix [Source:UniProtKB/TrEMBL;Acc:Q18590]) HSP 1 Score: 44.669 bits (104), Expect = 8.993e-6 Identity = 22/43 (51.16%), Postives = 27/43 (62.79%), Query Frame = 2 Query: 1568 SLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLN 1696 S N AF LR +PT EK+LS+IE LR +I YI F+ LL Sbjct: 47 SFNMAFSQLRALLPTLPVEKKLSKIEILRFSIAYISFLDNLLQ 89
BLAST of fer3l-1 protein vs. Ensembl Fly
Match: Fer3 (gene:FBgn0037937 transcript:FBtr0082435) HSP 1 Score: 88.5817 bits (218), Expect = 8.110e-20 Identity = 53/66 (80.30%), Postives = 63/66 (95.45%), Query Frame = 2 Query: 1502 RKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNG 1699 R+R++++AQRRAANIRERRRM++LNEAFD LR++VPTFAYEKRLSRIETLRLAITYI FM ELL+G Sbjct: 79 RRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYIGFMAELLSG 144
BLAST of fer3l-1 protein vs. Ensembl Fly
Match: Fer1 (gene:FBgn0037475 transcript:FBtr0081567) HSP 1 Score: 63.929 bits (154), Expect = 5.665e-11 Identity = 39/71 (54.93%), Postives = 58/71 (81.69%), Query Frame = 2 Query: 1487 SNKPKRKRIST--VXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 S+KP+R + ++ QR+AAN+RERRRM S+NEAF+ LR +PT YEKRLS+++TL+LAI+YI F++E++ Sbjct: 67 SHKPRRLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMV 137
BLAST of fer3l-1 protein vs. Ensembl Fly
Match: Fer1 (gene:FBgn0037475 transcript:FBtr0334670) HSP 1 Score: 63.5438 bits (153), Expect = 7.132e-11 Identity = 39/71 (54.93%), Postives = 58/71 (81.69%), Query Frame = 2 Query: 1487 SNKPKRKRIST--VXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 S+KP+R + ++ QR+AAN+RERRRM S+NEAF+ LR +PT YEKRLS+++TL+LAI+YI F++E++ Sbjct: 72 SHKPRRLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMV 142
BLAST of fer3l-1 protein vs. Ensembl Fly
Match: Fer2 (gene:FBgn0038402 transcript:FBtr0344012) HSP 1 Score: 61.6178 bits (148), Expect = 4.155e-10 Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 2 Query: 1568 SLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 S+N AFD LR VPTF YEKRLS+I+TLRLAI YI + E+L Sbjct: 163 SINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYISLLREVL 204
BLAST of fer3l-1 protein vs. Ensembl Fly
Match: Fer2 (gene:FBgn0038402 transcript:FBtr0301709) HSP 1 Score: 61.6178 bits (148), Expect = 4.275e-10 Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 2 Query: 1568 SLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 S+N AFD LR VPTF YEKRLS+I+TLRLAI YI + E+L Sbjct: 163 SINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYISLLREVL 204
BLAST of fer3l-1 protein vs. Ensembl Zebrafish
Match: ferd3l (Fer3-like bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-081104-461]) HSP 1 Score: 89.7373 bits (221), Expect = 1.706e-21 Identity = 53/67 (79.10%), Postives = 61/67 (91.04%), Query Frame = 2 Query: 1493 KPKRKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 KPKRKR+ + QR+AANIRER+RM+SLNEAFD LR+RVPTFAYEKRLSRIETLRLAI YI FMT++L Sbjct: 14 KPKRKRVISTVQRQAANIRERKRMFSLNEAFDRLRRRVPTFAYEKRLSRIETLRLAIVYIAFMTDIL 80
BLAST of fer3l-1 protein vs. Ensembl Zebrafish
Match: si:dkey-34f9.3 (si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-410]) HSP 1 Score: 61.6178 bits (148), Expect = 9.202e-11 Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 M S+N AF+ LR VPTF YEKRLS+I+TLRLAI YI + E+L Sbjct: 78 MLSINSAFEELRCHVPTFPYEKRLSKIDTLRLAIAYIALLREIL 121
BLAST of fer3l-1 protein vs. Ensembl Zebrafish
Match: ptf1a (pancreas associated transcription factor 1a [Source:NCBI gene;Acc:368662]) HSP 1 Score: 62.003 bits (149), Expect = 3.843e-10 Identity = 26/44 (59.09%), Postives = 35/44 (79.55%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 M S+N+AF+ LR +PT YEKRLS+++TLRLAI YI F+ EL+ Sbjct: 128 MQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLAELV 171
BLAST of fer3l-1 protein vs. Ensembl Zebrafish
Match: neurod2 (neuronal differentiation 2 [Source:NCBI gene;Acc:114435]) HSP 1 Score: 57.7658 bits (138), Expect = 1.948e-8 Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL-NGKNADNISLV 1726 M+ LN A D+LRK VP ++ ++LS+IETLRLA YI ++E+L NGK D +S V Sbjct: 120 MHDLNSALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRNGKRPDVVSYV 175
BLAST of fer3l-1 protein vs. Ensembl Zebrafish
Match: neurod1 (neuronal differentiation 1 [Source:NCBI gene;Acc:30169]) HSP 1 Score: 57.3806 bits (137), Expect = 2.218e-8 Identity = 28/56 (50.00%), Postives = 42/56 (75.00%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL-NGKNADNISLV 1726 M+ LN+A +SLRK VP ++ ++LS+IETLRLA YI ++E+L +GK+ D +S V Sbjct: 109 MHGLNDALESLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLMSFV 164
BLAST of fer3l-1 protein vs. Ensembl Xenopus
Match: ferd3l (Fer3-like bHLH transcription factor [Source:NCBI gene;Acc:100124312]) HSP 1 Score: 92.8189 bits (229), Expect = 7.113e-22 Identity = 58/78 (74.36%), Postives = 69/78 (88.46%), Query Frame = 2 Query: 1481 NPSNKPKRKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNGKNADN 1714 +P +PKRKR+ T AQR+AANIRER+RM++LNEAFD LRK+VPTFAYEKRLSRIETLRLAI YI FMTE+L KN++N Sbjct: 51 SPMGRPKRKRVITYAQRQAANIRERKRMFNLNEAFDLLRKKVPTFAYEKRLSRIETLRLAIVYISFMTEML--KNSEN 126
BLAST of fer3l-1 protein vs. Ensembl Xenopus
Match: ENSXETT00000031930.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:9:55646956:55647657:1 gene:ENSXETG00000008961.1 transcript:ENSXETT00000031930.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 64.3142 bits (155), Expect = 2.054e-11 Identity = 28/45 (62.22%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLN 1696 M S+N AF+ LR RVPTF YEKRLS+I+TLRLAI YI ++++L+ Sbjct: 96 MLSINSAFEELRGRVPTFPYEKRLSKIDTLRLAIAYIALLSDILS 140
BLAST of fer3l-1 protein vs. Ensembl Xenopus
Match: PTF1A (pancreas associated transcription factor 1a [Source:NCBI gene;Acc:100494161]) HSP 1 Score: 62.003 bits (149), Expect = 9.475e-10 Identity = 26/44 (59.09%), Postives = 36/44 (81.82%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 M S+N+AF+ LR +PT YEKRLS+++TLRLAI YI F++EL+ Sbjct: 182 MQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELV 225
BLAST of fer3l-1 protein vs. Ensembl Xenopus
Match: neurod1 (neuronal differentiation 1 [Source:NCBI gene;Acc:100038290]) HSP 1 Score: 57.3806 bits (137), Expect = 3.258e-8 Identity = 28/56 (50.00%), Postives = 41/56 (73.21%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL-NGKNADNISLV 1726 M+ LN A D+LRK VP ++ ++LS+IETLRLA YI ++E+L +GK+ D +S V Sbjct: 121 MHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFV 176
BLAST of fer3l-1 protein vs. Ensembl Xenopus
Match: neurod6 (neuronal differentiation 6 [Source:NCBI gene;Acc:779726]) HSP 1 Score: 55.4546 bits (132), Expect = 1.270e-7 Identity = 27/56 (48.21%), Postives = 40/56 (71.43%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLN-GKNADNISLV 1726 M+ LN+A D+LRK VP ++ ++LS+IETLRLA YI ++E+L GK D ++ V Sbjct: 107 MHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRIGKRPDLLTFV 162
BLAST of fer3l-1 protein vs. Ensembl Mouse
Match: Ferd3l (Fer3 like bHLH transcription factor [Source:MGI Symbol;Acc:MGI:2150010]) HSP 1 Score: 90.8929 bits (224), Expect = 7.212e-21 Identity = 56/77 (72.73%), Postives = 64/77 (83.12%), Query Frame = 2 Query: 1490 NKPKRKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNGKNADNIS 1720 +PKRKR+ T AQR+AANIRER+RM++LNEAFD LR++VPTFAYEKRLSRIETLRLAI YI FMTELL K S Sbjct: 92 GRPKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLQSKEEKEAS 168
BLAST of fer3l-1 protein vs. Ensembl Mouse
Match: Ptf1a (pancreas specific transcription factor, 1a [Source:MGI Symbol;Acc:MGI:1328312]) HSP 1 Score: 62.003 bits (149), Expect = 6.446e-10 Identity = 26/44 (59.09%), Postives = 36/44 (81.82%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 M S+N+AF+ LR +PT YEKRLS+++TLRLAI YI F++EL+ Sbjct: 173 MQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELV 216
BLAST of fer3l-1 protein vs. Ensembl Mouse
Match: Neurod1 (neurogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:1339708]) HSP 1 Score: 57.7658 bits (138), Expect = 1.716e-8 Identity = 28/56 (50.00%), Postives = 41/56 (73.21%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL-NGKNADNISLV 1726 M+ LN A D+LRK VP ++ ++LS+IETLRLA YI ++E+L +GK+ D +S V Sbjct: 114 MHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFV 169
BLAST of fer3l-1 protein vs. Ensembl Mouse
Match: Neurod6 (neurogenic differentiation 6 [Source:MGI Symbol;Acc:MGI:106593]) HSP 1 Score: 55.4546 bits (132), Expect = 1.070e-7 Identity = 27/56 (48.21%), Postives = 40/56 (71.43%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLN-GKNADNISLV 1726 M+ LN+A D+LRK VP ++ ++LS+IETLRLA YI ++E+L GK D ++ V Sbjct: 107 MHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRIGKRPDLLTFV 162
BLAST of fer3l-1 protein vs. Ensembl Mouse
Match: Neurod2 (neurogenic differentiation 2 [Source:MGI Symbol;Acc:MGI:107755]) HSP 1 Score: 55.0694 bits (131), Expect = 1.621e-7 Identity = 28/56 (50.00%), Postives = 40/56 (71.43%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL-NGKNADNISLV 1726 M+ LN A D+LRK VP ++ ++LS+IETLRLA YI ++E+L +GK D +S V Sbjct: 135 MHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKRPDLVSYV 190
BLAST of fer3l-1 protein vs. UniProt/SwissProt
Match: sp|Q923Z4|FER3L_MOUSE (Fer3-like protein OS=Mus musculus OX=10090 GN=Ferd3l PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.045e-20 Identity = 56/77 (72.73%), Postives = 64/77 (83.12%), Query Frame = 2 Query: 1490 NKPKRKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNGKNADNIS 1720 +PKRKR+ T AQR+AANIRER+RM++LNEAFD LR++VPTFAYEKRLSRIETLRLAI YI FMTELL K S Sbjct: 92 GRPKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLQSKEEKEAS 168
BLAST of fer3l-1 protein vs. UniProt/SwissProt
Match: sp|Q96RJ6|FER3L_HUMAN (Fer3-like protein OS=Homo sapiens OX=9606 GN=FERD3L PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.092e-19 Identity = 54/69 (78.26%), Postives = 62/69 (89.86%), Query Frame = 2 Query: 1490 NKPKRKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLN 1696 +PKRKR+ T AQR+AANIRER+RM++LNEAFD LR++VPTFAYEKRLSRIETLRLAI YI FMTELL Sbjct: 90 GRPKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLE 158
BLAST of fer3l-1 protein vs. UniProt/SwissProt
Match: sp|Q9VGJ5|FER3_DROME (Protein Fer3 OS=Drosophila melanogaster OX=7227 GN=fer3 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 8.130e-19 Identity = 53/66 (80.30%), Postives = 63/66 (95.45%), Query Frame = 2 Query: 1502 RKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNG 1699 R+R++++AQRRAANIRERRRM++LNEAFD LR++VPTFAYEKRLSRIETLRLAITYI FM ELL+G Sbjct: 79 RRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYIGFMAELLSG 144
BLAST of fer3l-1 protein vs. UniProt/SwissProt
Match: sp|Q7ZSX3|PTF1A_DANRE (Pancreas transcription factor 1 subunit alpha OS=Danio rerio OX=7955 GN=ptf1a PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.901e-9 Identity = 26/44 (59.09%), Postives = 35/44 (79.55%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 M S+N+AF+ LR +PT YEKRLS+++TLRLAI YI F+ EL+ Sbjct: 128 MQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLAELV 171
BLAST of fer3l-1 protein vs. UniProt/SwissProt
Match: sp|Q7RTS3|PTF1A_HUMAN (Pancreas transcription factor 1 subunit alpha OS=Homo sapiens OX=9606 GN=PTF1A PE=1 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 3.699e-9 Identity = 26/45 (57.78%), Postives = 36/45 (80.00%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLN 1696 M S+N+AF+ LR +PT YEKRLS+++TLRLAI YI F++EL+ Sbjct: 176 MQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQ 220
BLAST of fer3l-1 protein vs. TrEMBL
Match: U5YTA6 (Fer3l-1 protein (Fragment) OS=Schmidtea mediterranea OX=79327 GN=fer3l-1 PE=2 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 8.323e-101 Identity = 180/182 (98.90%), Postives = 182/182 (100.00%), Query Frame = 2 Query: 1154 LSQNQEPQFMFFDQCYIPYSAINNADNPSDRSGVTIPRSSVLQYPVFDENCQISLQELYTXXXXXXXXXXQIPAVMNDNNSRYSSASSEFYTSPDNKIIIQSNIAENSPNPSNKPKRKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNG 1699 LSQNQEPQFMFFDQCYIPYSAINNADNPSDRSGVTIPRSSVLQYPVFDENCQISL+ELYTNNNESNISNSQIPAVMNDNNSR+SSASSEFYTSPDNKIIIQSNIAENSPNPSNKPKRKRISTVAQRRAANIRERRRMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNG Sbjct: 1 LSQNQEPQFMFFDQCYIPYSAINNADNPSDRSGVTIPRSSVLQYPVFDENCQISLEELYTNNNESNISNSQIPAVMNDNNSRFSSASSEFYTSPDNKIIIQSNIAENSPNPSNKPKRKRISTVAQRRAANIRERRRMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNG 182
BLAST of fer3l-1 protein vs. TrEMBL
Match: A0A5N4A372 (Uncharacterized protein OS=Photinus pyralis OX=7054 GN=PPYR_03552 PE=4 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.852e-21 Identity = 62/88 (70.45%), Postives = 75/88 (85.23%), Query Frame = 2 Query: 1451 IQSNIAENSPNPSNKPKRKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNGKNADN 1714 I N + N+P S K R+R++T+AQRRAANIRERRRM++LNEAFD LR++VPTFAYEKRLSRIETLRLAITYI FMTELL+G N ++ Sbjct: 78 ISRNGSPNNPTQSQKKPRRRVATIAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYISFMTELLHGTNPEH 165
BLAST of fer3l-1 protein vs. TrEMBL
Match: A0A444TVV6 (Fer3-like protein OS=Acipenser ruthenus OX=7906 GN=EOD39_7857 PE=4 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.958e-20 Identity = 64/107 (59.81%), Postives = 76/107 (71.03%), Query Frame = 2 Query: 1400 YSSASSEFYTSPDNKIIIQSNIAENSPNPS-----NKPKRKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNGKN 1705 Y AS + ++K+ + S ENSP+ S + KRKR+ T QR AANIRER+RM+SLNEAFD LRK+VPTFAYEKRLSRIETLRLAI YI FM+ELL K Sbjct: 50 YDFASIHGFADAESKVSLGSLGMENSPDCSMSSLTGRSKRKRVITSNQRHAANIRERKRMFSLNEAFDDLRKKVPTFAYEKRLSRIETLRLAIVYISFMSELLKNKK 156
BLAST of fer3l-1 protein vs. TrEMBL
Match: A0A402ENE0 (BHLH domain-containing protein OS=Paroedura picta OX=143630 GN=parPi_0005291 PE=4 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.784e-20 Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 2 Query: 1478 PNPSNKPKRKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNGKN 1705 P+P +PKRKR+ T AQR+AANIRER+RM++LNEAFD LRK+VPTFAYEKRLSRIETLRLAI YI FMTELL G Sbjct: 83 PSPLGRPKRKRVITSAQRQAANIRERKRMFNLNEAFDQLRKKVPTFAYEKRLSRIETLRLAIVYISFMTELLGGGG 158
BLAST of fer3l-1 protein vs. TrEMBL
Match: A0A0U2T2J5 (Hlh transcription factor fer3-like 116 OS=Saccoglossus kowalevskii OX=10224 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.300e-20 Identity = 58/81 (71.60%), Postives = 72/81 (88.89%), Query Frame = 2 Query: 1493 KPKRKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNGKNADNISLVNYK 1735 KPKR+R++TVAQRRAANIRER+RM++LNEAFD LRKRVPTFAYEKRLSRIETLRLAI YI FM ++++GK+ ++ L+ K Sbjct: 157 KPKRRRVATVAQRRAANIRERKRMFNLNEAFDELRKRVPTFAYEKRLSRIETLRLAIVYIAFMGDIVSGKDEKDVKLMQIK 237
BLAST of fer3l-1 protein vs. Ensembl Cavefish
Match: ferd3l (Fer3-like bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-081104-461]) HSP 1 Score: 88.5817 bits (218), Expect = 2.512e-21 Identity = 53/68 (77.94%), Postives = 60/68 (88.24%), Query Frame = 2 Query: 1487 SNKPKRKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTEL 1690 S + +RKR+ T QR+AANIRER+RM+SLNEAFD LRK+VPTFAYEKRLSRIETLRLAI YI FMTEL Sbjct: 3 SGRSRRKRVITTVQRQAANIRERKRMFSLNEAFDELRKKVPTFAYEKRLSRIETLRLAIVYISFMTEL 70
BLAST of fer3l-1 protein vs. Ensembl Cavefish
Match: si:dkey-34f9.3 (neurogenic differentiation factor 1-like [Source:NCBI gene;Acc:107197807]) HSP 1 Score: 61.6178 bits (148), Expect = 2.149e-10 Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 M S+N AF+ LR VPTF YEKRLS+I+TLRLAI YI + E+L Sbjct: 133 MLSINSAFEQLRCHVPTFPYEKRLSKIDTLRLAIAYIALLREIL 176
BLAST of fer3l-1 protein vs. Ensembl Cavefish
Match: ptf1a (pancreas associated transcription factor 1a [Source:NCBI gene;Acc:103046795]) HSP 1 Score: 60.8474 bits (146), Expect = 5.672e-10 Identity = 26/44 (59.09%), Postives = 35/44 (79.55%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 M S+N+AF+ LR +PT YEKRLS+++TLRLAI YI F+ EL+ Sbjct: 105 MQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLAELV 148
BLAST of fer3l-1 protein vs. Ensembl Cavefish
Match: neurod6a (neuronal differentiation 6a [Source:NCBI gene;Acc:114414]) HSP 1 Score: 57.3806 bits (137), Expect = 1.689e-8 Identity = 29/57 (50.88%), Postives = 41/57 (71.93%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLN-GKNADNISLVN 1729 M+ LN A DSLRK VP ++ ++LS+IETLRLA YI ++E+L+ GK D +S V+ Sbjct: 113 MHGLNNALDSLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILSTGKRPDLLSFVH 169
BLAST of fer3l-1 protein vs. Ensembl Cavefish
Match: neurod2 (neuronal differentiation 2 [Source:NCBI gene;Acc:114435]) HSP 1 Score: 57.3806 bits (137), Expect = 1.790e-8 Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL-NGKNADNISLV 1726 M+ LN A D+LRK VP ++ ++LS+IETLRLA YI ++E+L NGK D +S V Sbjct: 124 MHDLNSALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRNGKRPDVVSYV 179
BLAST of fer3l-1 protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004072.1 (pep scaffold:Pmarinus_7.0:GL492732:1750:4325:-1 gene:ENSPMAG00000003727.1 transcript:ENSPMAT00000004072.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 63.5438 bits (153), Expect = 1.825e-11 Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLN 1696 M S+N AF+ LR +PT YEKRLS+++TLRLAI YI F+ EL++ Sbjct: 144 MQSINAAFEGLRAHIPTLPYEKRLSKVDTLRLAIGYISFLGELVH 188
BLAST of fer3l-1 protein vs. Ensembl Sea Lamprey
Match: si:dkey-34f9.3 (si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-410]) HSP 1 Score: 59.3066 bits (142), Expect = 4.741e-11 Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 M S+N AF+ LR VPTF YEKRLS+I+TLRLAI YI + ++L Sbjct: 46 MLSINSAFEELRCHVPTFPYEKRLSKIDTLRLAIAYIALLRDIL 89
BLAST of fer3l-1 protein vs. Ensembl Sea Lamprey
Match: neurod1 (neuronal differentiation 1 [Source:NCBI gene;Acc:30169]) HSP 1 Score: 53.9138 bits (128), Expect = 3.494e-8 Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLN-GKNADNISLV 1726 M+ LN A D+LRK VP ++ ++LS+IETLRLA YI ++E+L G + D +S V Sbjct: 36 MHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRAGTSPDLLSFV 91
BLAST of fer3l-1 protein vs. Ensembl Sea Lamprey
Match: TWIST1 (twist family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:12428]) HSP 1 Score: 48.1358 bits (113), Expect = 2.341e-7 Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 2 Query: 1568 SLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNGKNADN 1714 SLNEAF SLRK +PT +K LS+I+TL+LA YI F+ ++L DN Sbjct: 23 SLNEAFASLRKIIPTLPSDK-LSKIQTLKLASRYIDFLYQVLQSDEMDN 70
BLAST of fer3l-1 protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006843.1 (pep scaffold:Pmarinus_7.0:GL488467:178:1220:1 gene:ENSPMAG00000006182.1 transcript:ENSPMAT00000006843.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 49.2914 bits (116), Expect = 3.642e-7 Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 M++LN+A D+LR +PT + RL++IETLR A YI +TE L Sbjct: 56 MHNLNDALDALRGVLPTLPDDARLTKIETLRFAYNYIWVLTETL 99
BLAST of fer3l-1 protein vs. Ensembl Nematostella
Match: EDO43849 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RXI0]) HSP 1 Score: 65.4698 bits (158), Expect = 1.096e-13 Identity = 28/44 (63.64%), Postives = 37/44 (84.09%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 M S+NEAF+ LRK +PT YEKRLS+++TLRLAI YI F+TE++ Sbjct: 15 MQSINEAFEGLRKHIPTLPYEKRLSKVDTLRLAIGYIGFLTEMI 58
BLAST of fer3l-1 protein vs. Ensembl Nematostella
Match: EDO36265 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJ29]) HSP 1 Score: 51.2174 bits (121), Expect = 2.348e-7 Identity = 25/47 (53.19%), Postives = 35/47 (74.47%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAY--EKRLSRIETLRLAITYICFMTELLN 1696 M+SLN+AFDSLRK +P Y E++ S+I TLRLAI YI ++++L Sbjct: 80 MHSLNDAFDSLRKAIPKTNYNQEEKPSKIATLRLAIHYIAALSDILG 126
BLAST of fer3l-1 protein vs. Ensembl Nematostella
Match: EDO42924 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZZ0]) HSP 1 Score: 45.0542 bits (105), Expect = 1.829e-6 Identity = 20/43 (46.51%), Postives = 33/43 (76.74%), Query Frame = 2 Query: 1565 YSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 +S+N AF++LR +PT +++LS+IETLRLA +YI ++ +L Sbjct: 15 HSVNAAFNALRLLIPTEPSDRKLSKIETLRLASSYIAHLSTIL 57
BLAST of fer3l-1 protein vs. Ensembl Nematostella
Match: EDO38292 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SDD5]) HSP 1 Score: 47.3654 bits (111), Expect = 2.154e-6 Identity = 20/49 (40.82%), Postives = 33/49 (67.35%), Query Frame = 2 Query: 1571 LNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNGKNADNI 1717 +N+ F SLR+ +P F +K+LS++ETLR A+ YI + L+ +A+ I Sbjct: 86 VNDGFSSLRQHIPYFPEKKKLSKVETLRCAVAYIKHLQSLIEEYDAEKI 134
BLAST of fer3l-1 protein vs. Ensembl Nematostella
Match: TWIST (Predicted protein; Twist family bHLH transcription factor [Source:UniProtKB/TrEMBL;Acc:Q6S5G7]) HSP 1 Score: 46.2098 bits (108), Expect = 3.297e-6 Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 2 Query: 1568 SLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLN 1696 +LNEAF+ LRK +PT +K LS+I+TLRLA YI F+ ++L Sbjct: 51 ALNEAFNKLRKIIPTLPSDK-LSKIQTLRLASRYIDFLCQVLG 92
BLAST of fer3l-1 protein vs. Ensembl Medaka
Match: ferd3l (Fer3 like bHLH transcription factor [Source:NCBI gene;Acc:101167882]) HSP 1 Score: 88.5817 bits (218), Expect = 2.541e-21 Identity = 53/68 (77.94%), Postives = 61/68 (89.71%), Query Frame = 2 Query: 1490 NKPKRKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 K +R+RI TV QR+AAN+RERRRM+SLNEAFD LR++VPTFAYEKRLSRIETLRLAI YI FMT+LL Sbjct: 3 GKSRRRRIITVVQRQAANVRERRRMFSLNEAFDELRRKVPTFAYEKRLSRIETLRLAIVYISFMTDLL 70
BLAST of fer3l-1 protein vs. Ensembl Medaka
Match: si:dkey-34f9.3 (si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-410]) HSP 1 Score: 62.003 bits (149), Expect = 1.337e-10 Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 M S+N AF+ LR VPTF YEKRLS+I+TLRLAI YI + E+L Sbjct: 137 MLSINSAFEELRCHVPTFPYEKRLSKIDTLRLAIAYIALLREIL 180
BLAST of fer3l-1 protein vs. Ensembl Medaka
Match: ptf1a (pancreas associated transcription factor 1a [Source:NCBI gene;Acc:101160350]) HSP 1 Score: 62.7734 bits (151), Expect = 2.052e-10 Identity = 26/44 (59.09%), Postives = 35/44 (79.55%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 M S+N+AF+ LR +PT YEKRLS+++TLRLAI YI F+ EL+ Sbjct: 131 MQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLAELV 174
BLAST of fer3l-1 protein vs. Ensembl Medaka
Match: neurod1 (neuronal differentiation 1 [Source:NCBI gene;Acc:101157169]) HSP 1 Score: 57.3806 bits (137), Expect = 1.679e-8 Identity = 28/57 (49.12%), Postives = 42/57 (73.68%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL-NGKNADNISLVN 1729 M+ LN+A +SLRK VP ++ ++LS+IETLRLA YI ++E+L +GK D +S V+ Sbjct: 103 MHGLNDALESLRKVVPCYSKTQKLSKIETLRLAKNYIWTLSEILRSGKAPDLMSFVH 159
BLAST of fer3l-1 protein vs. Ensembl Medaka
Match: neurod2 (neurogenic differentiation factor 2 [Source:NCBI gene;Acc:101171533]) HSP 1 Score: 56.9954 bits (136), Expect = 2.272e-8 Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 2 Query: 1562 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL-NGKNADNISLV 1726 M+ LN A D+LRK VP ++ ++LS+IETLRLA YI + E+L NGK D +S V Sbjct: 116 MHDLNSALDNLRKVVPCYSKTQKLSKIETLRLAKNYILALGEILRNGKRPDVVSYV 171
BLAST of fer3l-1 protein vs. Planmine SMEST
Match: SMESG000028999.1 (SMESG000028999.1) HSP 1 Score: 579.326 bits (1492), Expect = 0.000e+0 Identity = 308/309 (99.68%), Postives = 309/309 (100.00%), Query Frame = 3 Query: 39 MNDFNKNEPISMLFSELFYFIATLKAIYYNNISDWDVVKIKNCIKRSKQCKKLGHFIHNNYQVEIISELYKKIQMLTPDVQWTSYGSNYLLHLDEICLQNIIENESINDNXXXXXXXXXXXXXXXXXXESFDSIQNEVNKLLVKLPESVRNRLINEFQMEIFSNHCQQLQNENIPIESWLNILFINNKYTAINSLSKFLVNEIWDFYDVIENWFIDKLISDKRLIFSTDHEALVNLCGKKPKFKSILIDSLLDAQILYCGNPETGKSEFPEKIMTFYEFKSVCQNFKADIMNCSLIKSNRNSEFFSSLL 965 MNDFNKNEPISMLFSELFYFIATLKAIYYNNISDWDVVKIKNCIKRSKQCKKLGHFIHNNYQVEIISELYKKIQMLTPDVQWTSYGSNYLLHLDEICLQNIIENESINDNVKLYVSKKLSRLKRSESYESFDSIQNEVNKLLVKLPESVRNRLINEFQMEIFSNHCQQLQNENIPIESWLNILFINNKYTAINSLSKFLVNEIWDFYDV+ENWFIDKLISDKRLIFSTDHEALVNLCGKKPKFKSILIDSLLDAQILYCGNPETGKSEFPEKIMTFYEFKSVCQNFKADIMNCSLIKSNRNSEFFSSLL Sbjct: 1 MNDFNKNEPISMLFSELFYFIATLKAIYYNNISDWDVVKIKNCIKRSKQCKKLGHFIHNNYQVEIISELYKKIQMLTPDVQWTSYGSNYLLHLDEICLQNIIENESINDNVKLYVSKKLSRLKRSESYESFDSIQNEVNKLLVKLPESVRNRLINEFQMEIFSNHCQQLQNENIPIESWLNILFINNKYTAINSLSKFLVNEIWDFYDVLENWFIDKLISDKRLIFSTDHEALVNLCGKKPKFKSILIDSLLDAQILYCGNPETGKSEFPEKIMTFYEFKSVCQNFKADIMNCSLIKSNRNSEFFSSLL 309
BLAST of fer3l-1 protein vs. Planmine SMEST
Match: SMESG000029000.1 (SMESG000029000.1) HSP 1 Score: 413.305 bits (1061), Expect = 1.553e-142 Identity = 230/233 (98.71%), Postives = 233/233 (100.00%), Query Frame = 2 Query: 1094 MNFATDYMYYSVNNSFNEDELSQNQEPQFMFFDQCYIPYSAINNADNPSDRSGVTIPRSSVLQYPVFDENCQISLQELYTXXXXXXXXXXQIPAVMNDNNSRYSSASSEFYTSPDNKIIIQSNIAENSPNPSNKPKRKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNGKNADNISLVNYKRIVGSTDSSRFSLLKSSEA 1792 MNFATDYMYYSVNNSFNEDEL+QNQEPQFMFFDQCYIPYSAINNADNPSDRSGVTIPRSSVLQYPVFDENCQISL+ELYTNNNESNISNSQIPAVMNDNNSR+SSASSEFYTSPDNKIIIQSNIAENSPNPSNKPKRKRISTVAQRRAANIRERRRMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNGKNADNISLVNYKRIVGSTDSSRFSLLKSSEA Sbjct: 1 MNFATDYMYYSVNNSFNEDELNQNQEPQFMFFDQCYIPYSAINNADNPSDRSGVTIPRSSVLQYPVFDENCQISLEELYTNNNESNISNSQIPAVMNDNNSRFSSASSEFYTSPDNKIIIQSNIAENSPNPSNKPKRKRISTVAQRRAANIRERRRMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNGKNADNISLVNYKRIVGSTDSSRFSLLKSSEA 233
BLAST of fer3l-1 protein vs. Planmine SMEST
Match: SMESG000029000.1 (SMESG000029000.1) HSP 1 Score: 398.282 bits (1022), Expect = 7.956e-137 Identity = 223/226 (98.67%), Postives = 226/226 (100.00%), Query Frame = 2 Query: 1115 MYYSVNNSFNEDELSQNQEPQFMFFDQCYIPYSAINNADNPSDRSGVTIPRSSVLQYPVFDENCQISLQELYTXXXXXXXXXXQIPAVMNDNNSRYSSASSEFYTSPDNKIIIQSNIAENSPNPSNKPKRKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNGKNADNISLVNYKRIVGSTDSSRFSLLKSSEA 1792 MYYSVNNSFNEDEL+QNQEPQFMFFDQCYIPYSAINNADNPSDRSGVTIPRSSVLQYPVFDENCQISL+ELYTNNNESNISNSQIPAVMNDNNSR+SSASSEFYTSPDNKIIIQSNIAENSPNPSNKPKRKRISTVAQRRAANIRERRRMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNGKNADNISLVNYKRIVGSTDSSRFSLLKSSEA Sbjct: 1 MYYSVNNSFNEDELNQNQEPQFMFFDQCYIPYSAINNADNPSDRSGVTIPRSSVLQYPVFDENCQISLEELYTNNNESNISNSQIPAVMNDNNSRFSSASSEFYTSPDNKIIIQSNIAENSPNPSNKPKRKRISTVAQRRAANIRERRRMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNGKNADNISLVNYKRIVGSTDSSRFSLLKSSEA 226
BLAST of fer3l-1 protein vs. Planmine SMEST
Match: SMESG000019274.1 (SMESG000019274.1) HSP 1 Score: 87.4261 bits (215), Expect = 1.104e-19 Identity = 56/74 (75.68%), Postives = 64/74 (86.49%), Query Frame = 2 Query: 1472 NSPNPSNKPKRKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 1693 NS N S+KPKR+R +T+ QR AANIRERRRM +LN+AFD LR+ VPTFAYEK+LSRIETLRLAITYI FMTE L Sbjct: 98 NSSNNSDKPKRRRTTTIEQRHAANIRERRRMNNLNKAFDRLRQLVPTFAYEKQLSRIETLRLAITYISFMTEQL 171
BLAST of fer3l-1 protein vs. Planmine SMEST
Match: SMESG000062901.1 (SMESG000062901.1) HSP 1 Score: 69.707 bits (169), Expect = 4.124e-14 Identity = 46/69 (66.67%), Postives = 55/69 (79.71%), Query Frame = 2 Query: 1493 KPKRKRISTVXXXXXXXXXXXXXMYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELLNG 1699 K KR+R + A R AANIRER+RM +LN AF++LR +VPTF +EKRLSRIETLRLAI YI FM +LNG Sbjct: 42 KQKRRRNKSTAHRTAANIRERKRMINLNAAFENLRLKVPTFVFEKRLSRIETLRLAIAYIKFMECILNG 110 The following BLAST results are available for this feature:
BLAST of fer3l-1 protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of fer3l-1 protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of fer3l-1 protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of fer3l-1 protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of fer3l-1 protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of fer3l-1 protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of fer3l-1 protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of fer3l-1 protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of fer3l-1 protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of fer3l-1 protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of fer3l-1 protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of fer3l-1 protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of fer3l-1 protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of fer3l-1 protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Cross References
External references for this transcript
Sequences
The following sequences are available for this feature:
transcript sequence >SMED30016826 ID=SMED30016826|Name=fer3l-1 protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1839bpback to top protein sequence of SMED30016826-orf-1 >SMED30016826-orf-1 ID=SMED30016826-orf-1|Name=SMED30016826-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=310bp MNDFNKNEPISMLFSELFYFIATLKAIYYNNISDWDVVKIKNCIKRSKQCback to top protein sequence of SMED30016826-orf-2 >SMED30016826-orf-2 ID=SMED30016826-orf-2|Name=SMED30016826-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=234bp MNFATDYMYYSVNNSFNEDELSQNQEPQFMFFDQCYIPYSAINNADNPSDback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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