RING-type domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Homology
BLAST of RING-type domain-containing protein vs. Ensembl Human
Match: HADH (hydroxyacyl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4799]) HSP 1 Score: 63.1586 bits (152), Expect = 1.138e-10 Identity = 48/179 (26.82%), Postives = 82/179 (45.81%), Query Frame = 3 Query: 120 CAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSG---------SILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGK 629 +IG GLMG IA A GH V + D IL + ++ E+ + + +++ +G +I + V D + E + +++ VK ++ + K A AE TI +NT L + ++ ++RF G+ F PV + VEV TSQ+T + +A+GK Sbjct: 30 VTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDIL-AKSKKGIEESLRKVAKKKFAENLKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFA-AEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 206
BLAST of RING-type domain-containing protein vs. Ensembl Human
Match: HADH (hydroxyacyl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4799]) HSP 1 Score: 63.1586 bits (152), Expect = 2.606e-10 Identity = 48/179 (26.82%), Postives = 82/179 (45.81%), Query Frame = 3 Query: 120 CAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSG---------SILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGK 629 +IG GLMG IA A GH V + D IL + ++ E+ + + +++ +G +I + V D + E + +++ VK ++ + K A AE TI +NT L + ++ ++RF G+ F PV + VEV TSQ+T + +A+GK Sbjct: 30 VTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDIL-AKSKKGIEESLRKVAKKKFAENLKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFA-AEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 206
BLAST of RING-type domain-containing protein vs. Ensembl Human
Match: HADH (hydroxyacyl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4799]) HSP 1 Score: 63.1586 bits (152), Expect = 2.637e-10 Identity = 48/179 (26.82%), Postives = 82/179 (45.81%), Query Frame = 3 Query: 120 CAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSG---------SILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGK 629 +IG GLMG IA A GH V + D IL + ++ E+ + + +++ +G +I + V D + E + +++ VK ++ + K A AE TI +NT L + ++ ++RF G+ F PV + VEV TSQ+T + +A+GK Sbjct: 30 VTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDIL-AKSKKGIEESLRKVAKKKFAENLKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFA-AEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 206
BLAST of RING-type domain-containing protein vs. Ensembl Human
Match: HADH (hydroxyacyl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4799]) HSP 1 Score: 63.5438 bits (153), Expect = 2.757e-10 Identity = 48/177 (27.12%), Postives = 82/177 (46.33%), Query Frame = 3 Query: 126 IIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSG---------SILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGK 629 +IG GLMG IA A GH V + D IL + ++ E+ + + +++ +G +I + V D + E + +++ VK ++ + K A AE TI +NT L + ++ ++RF G+ F PV + VEV TSQ+T + +A+GK Sbjct: 91 VIGGGLMGAGIAQVAAATGHTVVLVDQTEDIL-AKSKKGIEESLRKVAKKKFAENLKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFA-AEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 265
BLAST of RING-type domain-containing protein vs. Ensembl Human
Match: HADH (hydroxyacyl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4799]) HSP 1 Score: 63.1586 bits (152), Expect = 2.996e-10 Identity = 48/179 (26.82%), Postives = 82/179 (45.81%), Query Frame = 3 Query: 120 CAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSG---------SILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGK 629 +IG GLMG IA A GH V + D IL + ++ E+ + + +++ +G +I + V D + E + +++ VK ++ + K A AE TI +NT L + ++ ++RF G+ F PV + VEV TSQ+T + +A+GK Sbjct: 30 VTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDIL-AKSKKGIEESLRKVAKKKFAENLKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFA-AEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 206
BLAST of RING-type domain-containing protein vs. Ensembl Celegans
Match: B0272.3 (Probable 3-hydroxyacyl-CoA dehydrogenase B0272.3 [Source:UniProtKB/Swiss-Prot;Acc:P41938]) HSP 1 Score: 63.929 bits (154), Expect = 4.531e-11 Identity = 51/179 (28.49%), Postives = 85/179 (47.49%), Query Frame = 3 Query: 120 CAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVIL----NSVCXXXXXXXXXXXXXXXXTQSVFSGSIL----CMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKT 632 IIG GLMG IA A V + DS+ L + +K K+ + Q+ S+L + + + V DAD + E + +++ +K ++ A++ ++A T+I TNT L + + +LK K RF G+ F PV + +EV TS T +Q+ + +GKT Sbjct: 25 VTIIGAGLMGSGIAQVSANAKLNVTVVDSNQSALEKAQQGIANSLKRVAKKKHADDAAAQTALVSSVLDRIKMSTNVSDSVKDADLVIEAIVENIDIKRKLFAEV-EVAAKPTTLITTNTSSLRLADIGLNLKDKSRFGGLHFFNPVPMMKLLEVVRHTETSDATFNQLVDYGKTVGKT 202
BLAST of RING-type domain-containing protein vs. Ensembl Celegans
Match: ech-1.2 (Enoyl-CoA Hydratase [Source:UniProtKB/TrEMBL;Acc:Q9GYT0]) HSP 1 Score: 53.5286 bits (127), Expect = 2.419e-7 Identity = 41/185 (22.16%), Postives = 83/185 (44.86%), Query Frame = 3 Query: 87 NELSIKFAMVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVIL----NSVCXXXXXXXXXXXXXXXXTQSVFSGSILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGK 629 N+ + + A++G GLMG IA G R + D++ + N + + + K L + +++ + + Y + +AD + E V +D+ +K +++ I + TII +NT L + ++ ++ +G+ + PV + +E+ D TS+ TL+ L GK Sbjct: 370 NKYGKGLPVNEIAVVGAGLMGAGIANVTIDKGIRTVLLDANPAGVERGQNQIATHLNKQVKRRKINKLEKERIYNHLVPTID--YSAMKNADVVIEAVFEDLQLKHKVIKQIESV-VGPNTIIASNTSALPIKDIAAASSRPDKVIGMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGK 551
BLAST of RING-type domain-containing protein vs. Ensembl Celegans
Match: ech-1.2 (Enoyl-CoA Hydratase [Source:UniProtKB/TrEMBL;Acc:Q9GYT0]) HSP 1 Score: 53.5286 bits (127), Expect = 2.724e-7 Identity = 41/185 (22.16%), Postives = 83/185 (44.86%), Query Frame = 3 Query: 87 NELSIKFAMVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVIL----NSVCXXXXXXXXXXXXXXXXTQSVFSGSILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGK 629 N+ + + A++G GLMG IA G R + D++ + N + + + K L + +++ + + Y + +AD + E V +D+ +K +++ I + TII +NT L + ++ ++ +G+ + PV + +E+ D TS+ TL+ L GK Sbjct: 370 NKYGKGLPVNEIAVVGAGLMGAGIANVTIDKGIRTVLLDANPAGVERGQNQIATHLNKQVKRRKINKLEKERIYNHLVPTID--YSAMKNADVVIEAVFEDLQLKHKVIKQIESV-VGPNTIIASNTSALPIKDIAAASSRPDKVIGMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGK 551
BLAST of RING-type domain-containing protein vs. Ensembl Celegans
Match: ech-1.2 (Enoyl-CoA Hydratase [Source:UniProtKB/TrEMBL;Acc:Q9GYT0]) HSP 1 Score: 53.1434 bits (126), Expect = 3.232e-7 Identity = 41/185 (22.16%), Postives = 83/185 (44.86%), Query Frame = 3 Query: 87 NELSIKFAMVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVIL----NSVCXXXXXXXXXXXXXXXXTQSVFSGSILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGK 629 N+ + + A++G GLMG IA G R + D++ + N + + + K L + +++ + + Y + +AD + E V +D+ +K +++ I + TII +NT L + ++ ++ +G+ + PV + +E+ D TS+ TL+ L GK Sbjct: 344 NKYGKGLPVNEIAVVGAGLMGAGIANVTIDKGIRTVLLDANPAGVERGQNQIATHLNKQVKRRKINKLEKERIYNHLVPTID--YSAMKNADVVIEAVFEDLQLKHKVIKQIESV-VGPNTIIASNTSALPIKDIAAASSRPDKVIGMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGK 525
BLAST of RING-type domain-containing protein vs. Ensembl Celegans
Match: C11H1.3 (pep chromosome:WBcel235:X:14307863:14311683:-1 gene:WBGene00007529.1 transcript:C11H1.3.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C11H1.3) HSP 1 Score: 52.7582 bits (125), Expect = 3.646e-7 Identity = 21/42 (50.00%), Postives = 29/42 (69.05%), Query Frame = 3 Query: 861 ECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCRS 986 EC ICL + RD ++ PCRHL +C CA L +++ CP+CRS Sbjct: 268 ECIICLSDIRDTVILPCRHLCVCSNCADSLRYKHNNCPICRS 309
BLAST of RING-type domain-containing protein vs. Ensembl Fly
Match: Had2 (gene:FBgn0033949 transcript:FBtr0087499) HSP 1 Score: 61.6178 bits (148), Expect = 3.237e-10 Identity = 52/180 (28.89%), Postives = 87/180 (48.33%), Query Frame = 3 Query: 117 KCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSGSILC---------MSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGK 629 K I+G GL+G A A G+RV++YD IL S ++ + L QS G+I +RL E +A I ECV + + +K + + + +L E+T++ ++T + SE L+ +++ L L P YFIP VE+ A TS + + R L+ ++G+ Sbjct: 5 KIGIVGSGLIGRAWAMLFAAAGYRVQLYD----ILESQLATALQELDKDLHRLE-EQSALRGNIRASEQFALIGVTTRLEELTREAVHIQECVPEVLHLKKSLYSQLDEL-LEEQTVVASSTSTFMPSLYSEGLQKRQQMLVAHPLNPPYFIPLVEIVPAPWTSPSAVERTRDLMLSLGQ 178
BLAST of RING-type domain-containing protein vs. Ensembl Fly
Match: CG9941 (gene:FBgn0030514 transcript:FBtr0073843) HSP 1 Score: 52.373 bits (124), Expect = 7.908e-7 Identity = 21/46 (45.65%), Postives = 29/46 (63.04%), Query Frame = 3 Query: 861 ECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCRSQIQS 998 EC IC+ RD L+ PCRHL LC CA L + + CP+CR+ ++ Sbjct: 318 ECVICMSETRDTLILPCRHLCLCNSCADSLRYQANNCPICRAPFRA 363
BLAST of RING-type domain-containing protein vs. Ensembl Fly
Match: CG2617 (gene:FBgn0032877 transcript:FBtr0081391) HSP 1 Score: 50.8322 bits (120), Expect = 8.118e-7 Identity = 27/79 (34.18%), Postives = 41/79 (51.90%), Query Frame = 3 Query: 789 WTSLGDARAMSNSMSALYNPPSSG--ECAICLDNPRDCLLEPCRHLILCQKCA-SMLLLRNDYCPMCRSQIQSTGGVYL 1016 WT + N N S+ C +C+ R+ ++ PCRHL LC++C+ ++LL D CP+CR I S VY+ Sbjct: 196 WTHHKLQHFIHNVWYVSENAGSASPERCVVCMAQSRNVVVMPCRHLCLCKECSLQLVLLLEDRCPVCRHNITSFLSVYV 274
BLAST of RING-type domain-containing protein vs. Ensembl Fly
Match: CG2617 (gene:FBgn0032877 transcript:FBtr0336825) HSP 1 Score: 50.8322 bits (120), Expect = 8.118e-7 Identity = 27/79 (34.18%), Postives = 41/79 (51.90%), Query Frame = 3 Query: 789 WTSLGDARAMSNSMSALYNPPSSG--ECAICLDNPRDCLLEPCRHLILCQKCA-SMLLLRNDYCPMCRSQIQSTGGVYL 1016 WT + N N S+ C +C+ R+ ++ PCRHL LC++C+ ++LL D CP+CR I S VY+ Sbjct: 196 WTHHKLQHFIHNVWYVSENAGSASPERCVVCMAQSRNVVVMPCRHLCLCKECSLQLVLLLEDRCPVCRHNITSFLSVYV 274
BLAST of RING-type domain-containing protein vs. Ensembl Zebrafish
Match: hadh (hydroxyacyl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040801-261]) HSP 1 Score: 59.6918 bits (143), Expect = 2.256e-9 Identity = 50/178 (28.09%), Postives = 80/178 (44.94%), Query Frame = 3 Query: 120 CAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQS----VFSGSIL----CMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGK 629 +IG GLMG IA A GH V + D+ ILN + I+ K + K+ + F +L + V D + E + +++ VK + + K+A E TI +NT L + ++ +RF G+ F PV + VEV +TSQ+T + +A+GK Sbjct: 25 VTVIGGGLMGAGIAQVAASTGHSVVLVDTSADILNKSAKGIENSLKRVAKKKFAEKPEDGEAFVQKVLKNVSTSTDAASVVHGTDLVVEAIVENLKVKQDLFGALDKVA-PEHTIFASNTSSLPIADIASCTARLDRFGGLHFFNPVPMMKLVEVIKTPATSQQTFDALLEFSKALGK 201
BLAST of RING-type domain-containing protein vs. Ensembl Zebrafish
Match: ehhadh (enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Source:NCBI gene;Acc:100000859]) HSP 1 Score: 58.5362 bits (140), Expect = 9.513e-9 Identity = 46/170 (27.06%), Postives = 84/170 (49.41%), Query Frame = 3 Query: 120 CAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSGSILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGK 629 A+IG G MG I LA G V +S+ +L + + + + K ++ S+ ++L S + + D D + E V +DMA+K QI ++S++ T++C+NT LDV+ L++ + G+ F P + + +EV +S+ ++ L + MGK Sbjct: 298 AAVIGLGTMGRGIVVSLARVGISVIAVESEKKLLETGRQMVIGMLERDAKRRGVSASL---NLLKFSLSLQDLKDVDLVIEAVFEDMALKKQIFRELSRVCRPA-TLLCSNTSGLDVDALADVTDRPQLVAGMHFFSPAHVMKLLEVVCGPRSSKEAIATAMSLGKRMGK 463
BLAST of RING-type domain-containing protein vs. Ensembl Zebrafish
Match: mgrn1b (mahogunin, ring finger 1b [Source:ZFIN;Acc:ZDB-GENE-110401-3]) HSP 1 Score: 53.1434 bits (126), Expect = 4.201e-7 Identity = 23/47 (48.94%), Postives = 30/47 (63.83%), Query Frame = 3 Query: 843 NPPSSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCR 983 N +S EC +CL + RD L+ PCRHL LC CA L + + CP+CR Sbjct: 269 NSDNSNECVVCLSDLRDTLILPCRHLCLCNSCADTLRYQANNCPICR 315
BLAST of RING-type domain-containing protein vs. Ensembl Zebrafish
Match: mgrn1b (mahogunin, ring finger 1b [Source:ZFIN;Acc:ZDB-GENE-110401-3]) HSP 1 Score: 53.1434 bits (126), Expect = 4.461e-7 Identity = 23/47 (48.94%), Postives = 30/47 (63.83%), Query Frame = 3 Query: 843 NPPSSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCR 983 N +S EC +CL + RD L+ PCRHL LC CA L + + CP+CR Sbjct: 269 NSDNSNECVVCLSDLRDTLILPCRHLCLCNSCADTLRYQANNCPICR 315
BLAST of RING-type domain-containing protein vs. Ensembl Zebrafish
Match: mgrn1a (mahogunin, ring finger 1a [Source:NCBI gene;Acc:793939]) HSP 1 Score: 53.1434 bits (126), Expect = 4.853e-7 Identity = 23/47 (48.94%), Postives = 30/47 (63.83%), Query Frame = 3 Query: 843 NPPSSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCR 983 N +S EC +CL + RD L+ PCRHL LC CA L + + CP+CR Sbjct: 269 NSDNSSECVVCLSDLRDTLILPCRHLCLCNACADTLRYQANNCPICR 315
BLAST of RING-type domain-containing protein vs. Ensembl Xenopus
Match: vps41 (VPS41, HOPS complex subunit [Source:Xenbase;Acc:XB-GENE-999710]) HSP 1 Score: 65.0846 bits (157), Expect = 5.194e-11 Identity = 51/191 (26.70%), Postives = 79/191 (41.36%), Query Frame = 3 Query: 102 KFAMVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSGSILCMSRLYE--------------CVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKT 632 K A+ +IG GLMG IA A GH V + D IL K +T+ +F+ S+ E V D + E + +++ VK ++ + K A E TI +NT L + ++ ++RF G+ F PV + +EV TSQ T + +A+GKT Sbjct: 25 KLAIKHVTVIGGGLMGAGIAQVAASTGHTVVLVDQTDDILKK------SRKTIEDSLKRVTKKMFADKPEAASQFIEKILANFTTSTDPAAVVHSTDLVVEAIVENLDVKNELFKRLDKFA-PEHTIFASNTSSLPITDIANSTTRQDRFGGLHFFNPVPMMKLIEVIKTPMTSQTTFESLMDFSKALGKT 208
BLAST of RING-type domain-containing protein vs. Ensembl Xenopus
Match: vps41 (VPS41, HOPS complex subunit [Source:Xenbase;Acc:XB-GENE-999710]) HSP 1 Score: 65.0846 bits (157), Expect = 5.306e-11 Identity = 51/191 (26.70%), Postives = 79/191 (41.36%), Query Frame = 3 Query: 102 KFAMVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSGSILCMSRLYE--------------CVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKT 632 K A+ +IG GLMG IA A GH V + D IL K +T+ +F+ S+ E V D + E + +++ VK ++ + K A E TI +NT L + ++ ++RF G+ F PV + +EV TSQ T + +A+GKT Sbjct: 23 KLAIKHVTVIGGGLMGAGIAQVAASTGHTVVLVDQTDDILKK------SRKTIEDSLKRVTKKMFADKPEAASQFIEKILANFTTSTDPAAVVHSTDLVVEAIVENLDVKNELFKRLDKFA-PEHTIFASNTSSLPITDIANSTTRQDRFGGLHFFNPVPMMKLIEVIKTPMTSQTTFESLMDFSKALGKT 206
BLAST of RING-type domain-containing protein vs. Ensembl Xenopus
Match: pla2g7 (phospholipase A2 group VII [Source:Xenbase;Acc:XB-GENE-940049]) HSP 1 Score: 52.7582 bits (125), Expect = 1.053e-6 Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 3 Query: 852 SSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCR 983 +S EC +CL + RD L+ PCRHL LC CA L + CP+CR Sbjct: 257 NSAECVVCLSDVRDTLILPCRHLCLCNACADTLRYQASNCPICR 300
BLAST of RING-type domain-containing protein vs. Ensembl Xenopus
Match: pla2g7 (phospholipase A2 group VII [Source:Xenbase;Acc:XB-GENE-940049]) HSP 1 Score: 52.7582 bits (125), Expect = 1.068e-6 Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 3 Query: 852 SSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCR 983 +S EC +CL + RD L+ PCRHL LC CA L + CP+CR Sbjct: 267 NSAECVVCLSDVRDTLILPCRHLCLCNACADTLRYQASNCPICR 310
BLAST of RING-type domain-containing protein vs. Ensembl Xenopus
Match: pla2g7 (phospholipase A2 group VII [Source:Xenbase;Acc:XB-GENE-940049]) HSP 1 Score: 52.373 bits (124), Expect = 1.093e-6 Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 3 Query: 852 SSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCR 983 +S EC +CL + RD L+ PCRHL LC CA L + CP+CR Sbjct: 273 NSAECVVCLSDVRDTLILPCRHLCLCNACADTLRYQASNCPICR 316
BLAST of RING-type domain-containing protein vs. Ensembl Mouse
Match: Hadh (hydroxyacyl-Coenzyme A dehydrogenase [Source:MGI Symbol;Acc:MGI:96009]) HSP 1 Score: 61.6178 bits (148), Expect = 4.484e-10 Identity = 48/179 (26.82%), Postives = 85/179 (47.49%), Query Frame = 3 Query: 120 CAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSG------SILCMSRLYEC---VDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGK 629 +IG GLMG IA A GH V + D IL + ++ E+ + + + T++ +G ++ C+S + V D + E + +++ +K ++ + K A AE TI +NT L + ++ ++RF G+ F PV + VEV TSQ+T + + +GK Sbjct: 30 VTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDIL-AKSKKGIEESLKRMAKKKFTENPKAGDEFVEKTLSCLSTSTDAASVVHSTDLVVEAIVENLKLKNELFQRLDKFA-AEHTIFASNTSSLQITNIANATTRQDRFAGLHFFNPVPMMKLVEVIKTPMTSQKTFESLVDFCKTLGK 206
BLAST of RING-type domain-containing protein vs. Ensembl Mouse
Match: Hadha (hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit [Source:MGI Symbol;Acc:MGI:2135593]) HSP 1 Score: 55.8398 bits (133), Expect = 8.723e-8 Identity = 40/144 (27.78%), Postives = 70/144 (48.61%), Query Frame = 3 Query: 117 KCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILN----SVCXXXXXXXXXXXXXXXXTQSVFSGSILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPV 536 + AI+G GLMG IA G + + D+ + L V + + + K+ S+FS I + Y+ + AD + E V +D+ VK ++L ++ + T E I +NT L +NQ++ K E+ +G+ + PV Sbjct: 363 QLAILGAGLMGAGIAQVSVDKGLKTLLKDTTVTGLGRGQQQVFKGLNDKVKKKALTSFERDSIFSNLIGQLD--YKGFEKADMVIEAVFEDLGVKHKVLKEVESV-TPEHCIFASNTSALPINQIAAVSKRPEKVIGMHYFSPV 503
BLAST of RING-type domain-containing protein vs. Ensembl Mouse
Match: Rnf26 (ring finger protein 26 [Source:MGI Symbol;Acc:MGI:2388131]) HSP 1 Score: 48.9062 bits (115), Expect = 1.842e-7 Identity = 26/56 (46.43%), Postives = 31/56 (55.36%), Query Frame = 3 Query: 858 GECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDY---CPMCRSQIQSTGGVYL 1016 +C IC D + LL PCRHL LCQ C +L+ Y CP+CR I T VYL Sbjct: 9 KKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRSILQTLNVYL 64
BLAST of RING-type domain-containing protein vs. Ensembl Mouse
Match: Rnf26 (ring finger protein 26 [Source:MGI Symbol;Acc:MGI:2388131]) HSP 1 Score: 52.373 bits (124), Expect = 5.092e-7 Identity = 26/55 (47.27%), Postives = 31/55 (56.36%), Query Frame = 3 Query: 861 ECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDY---CPMCRSQIQSTGGVYL 1016 +C IC D + LL PCRHL LCQ C +L+ Y CP+CR I T VYL Sbjct: 249 KCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRSILQTLNVYL 303
BLAST of RING-type domain-containing protein vs. Ensembl Mouse
Match: Rnf157 (ring finger protein 157 [Source:MGI Symbol;Acc:MGI:2442484]) HSP 1 Score: 53.1434 bits (126), Expect = 5.416e-7 Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 3 Query: 852 SSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCR 983 +S EC +CL + RD L+ PCRHL LC CA L + + CP+CR Sbjct: 273 NSAECVVCLSDVRDTLILPCRHLCLCNTCADTLRYQANNCPICR 316
BLAST of RING-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9ZPI5|MFP2_ARATH (Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 OS=Arabidopsis thaliana OX=3702 GN=MFP2 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.122e-13 Identity = 53/187 (28.34%), Postives = 99/187 (52.94%), Query Frame = 3 Query: 78 GIINELSIKFAMVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSG--SILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKT 632 G+ + + + K AIIG GLMG IA L L + V + + + L + R+K + + +++G ++Q F S+L S YE D D + E V +++++K QI AD+ K + I+ +NT +D+N++ E K ++R +G F P + +P +E+ + TS + + + + + + KT Sbjct: 301 GVTDRGLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCP-QHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKIKKT 486
BLAST of RING-type domain-containing protein vs. UniProt/SwissProt
Match: sp|O49809|MFPA_BRANA (Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a OS=Brassica napus OX=3708 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 7.177e-13 Identity = 57/188 (30.32%), Postives = 102/188 (54.26%), Query Frame = 3 Query: 117 KCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSG--SILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKTLFFRSRKEPLILTD 674 K AIIG GLMG IA L L + V + + + L + R+K + + +K+G +++ F S+L S YE D D + E V +++++K QI AD+ K + I+ +NT +D+N++ E K ++R +G F P + +P +E+ + TS + + LL+ +GK + RK P+++ + Sbjct: 314 KVAIIGGGLMGSGIATALILSNYSVILKEVNEKFLEAGIGRVKANLQSRVKKGKMSKEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYC-PQHCILASNTSTIDLNKIGERTKSQDRIIGAHFFSPAHVMPLLEIVRTNHTSAQVIVD---LLD-VGKKI----RKTPVVVGN 492
BLAST of RING-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q6LW06|FADB_PHOPR (Fatty acid oxidation complex subunit alpha OS=Photobacterium profundum (strain SS9) OX=298386 GN=fadB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.233e-12 Identity = 41/128 (32.03%), Postives = 70/128 (54.69%), Query Frame = 3 Query: 291 VFSGSILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKTLFFRSRKEPLILTD 674 V SG + S Y +DAD + E V ++ +KA +LA++ ++ T+I +NT + +N L++ LK E F G+ F PV+ +P VE+ + TS+ T+S+V MGK+ P+++ D Sbjct: 377 VLSG--ITPSLHYAGAEDADIVVEAVVENPKIKAAVLAEVES-NVSDTTVIASNTSTIPINLLAQSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSEETISRVVAYAAKMGKS--------PIVVND 493
BLAST of RING-type domain-containing protein vs. UniProt/SwissProt
Match: sp|A5F465|FADB_VIBC3 (Fatty acid oxidation complex subunit alpha OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=fadB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.298e-12 Identity = 39/116 (33.62%), Postives = 66/116 (56.90%), Query Frame = 3 Query: 327 YECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKTLFFRSRKEPLILTD 674 Y +D AD I E V ++ VKA +L+++ L AE TI+ +NT + +N L++ LK + F G+ F PV+ +P VE+ + TS+ T+++V MGK+ P+++ D Sbjct: 388 YAGIDQADVIVEAVVENPKVKAAVLSEVEGLVDAE-TILTSNTSTIPINLLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEHTSEDTINRVVAYAAKMGKS--------PIVVND 494
BLAST of RING-type domain-containing protein vs. UniProt/SwissProt
Match: sp|A9KU91|FADB_SHEB9 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS195) OX=399599 GN=fadB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.379e-12 Identity = 37/116 (31.90%), Postives = 63/116 (54.31%), Query Frame = 3 Query: 327 YECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKTLFFRSRKEPLILTD 674 Y + +D + E V + +KAQ+LA++ + E II +NT + +N L++ +K ERF G+ F PV+ +P VEV + +S+ T++ V MGKT P+++ D Sbjct: 387 YAAIKHSDVVVEAVVEHPKIKAQVLAEVEGYVS-EDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAYASKMGKT--------PIVVND 493
BLAST of RING-type domain-containing protein vs. TrEMBL
Match: A0A1S3IJX5 (peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 OS=Lingula unguis OX=7574 GN=LOC106165016 PE=4 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.239e-82 Identity = 154/304 (50.66%), Postives = 196/304 (64.47%), Query Frame = 3 Query: 111 MVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSGSILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKTLFFRSRKEPLILTDEQRECRRELARQEMWRSGGIATSV-CQVPELAASYSEGQWTSLGDARAMSNSMSALYNPPSSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCRSQIQSTGGVYLS 1019 MVK A++GCGLMG KIAG++A HGHRVKMYDS+I LNSV ERI+EDK+ L +EGL++ F G +LCMS L E V+DADFIFE V DD+ VK I +S T+ II +NTL LD++Q+ E YKER LG+RFL+PVY+IPEVE+T TS + +VR LLE MGKTLFFRS EPLIL++EQRE R+ Q++ G+ +P L G + D S M + +CAIC+D+ RDCLL PC H++ CQ CA +LL R D CP+CR +I VY S Sbjct: 1 MVKIAVLGCGLMGVKIAGEMAYHGHRVKMYDSNINQLNSVYERIEEDKRHLRREGLMSHRNFIGQVLCMSLLEETVNDADFIFEAVVDDLKVKQDIFERVSHCCTSN-AIIASNTLNLDMSQIVERTAYKERTLGLRFLFPVYYIPEVEITPGKHTSAEVIEKVRILLEKMGKTLFFRSGGEPLILSEEQREARKLARIQQIKNQSGLGYFFESAIPALG---HRGNFAPPQDDDTASYVMEG-----TDRDCAICMDHTRDCLLCPCHHMVTCQDCARLLLNRRDSCPICRKEITEVIKVYHS 295
BLAST of RING-type domain-containing protein vs. TrEMBL
Match: A0A1S3ICF4 (peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like OS=Lingula unguis OX=7574 GN=LOC106163004 PE=4 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 8.560e-82 Identity = 153/304 (50.33%), Postives = 194/304 (63.82%), Query Frame = 3 Query: 111 MVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSGSILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKTLFFRSRKEPLILTDEQRECRRELARQEMWRSGGIATSV-CQVPELAASYSEGQWTSLGDARAMSNSMSALYNPPSSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCRSQIQSTGGVYLS 1019 MVK A++GCGLMG KIAG++A HGHRVKMYDS+ LNSV ERI+EDK+ L +EGL++ F G +LCMS L E V+DADFIFE V DD+ VK I +S T+ II +NTL LD+ Q+ E YKER LG+RFL+PVY+IPEVE+T TS + +VR LLE MGKTLFFRS EPLIL++EQRE R+ Q++ G+ +P L G + D S M + +CAIC+D+ RDCLL PC H++ CQ CA +LL R D CP+CR +I VY S Sbjct: 1 MVKIAVLGCGLMGVKIAGEMAYHGHRVKMYDSNTNQLNSVYERIEEDKRHLRREGLMSHRNFIGQVLCMSLLEETVNDADFIFEAVVDDLKVKQDIFERVSHCCTSN-AIIASNTLNLDMGQIVERTAYKERTLGLRFLFPVYYIPEVEITPGKHTSAEVIEKVRILLEKMGKTLFFRSGGEPLILSEEQREARKLARIQQIKNQSGLGYFFESAIPALG---HRGNFAPPQDDDTASYVMEG-----TDRDCAICMDHTRDCLLCPCHHMVTCQDCARLLLNRRDSCPICRKEITEVIKVYHS 295
BLAST of RING-type domain-containing protein vs. TrEMBL
Match: R7VL39 (RING-type domain-containing protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_222534 PE=4 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 6.669e-77 Identity = 148/303 (48.84%), Postives = 192/303 (63.37%), Query Frame = 3 Query: 111 MVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSGSILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKTLFFRSRKEPLILTDEQRECRRELARQEMWRSGGIATSVCQVPELAASYSEGQWTSLGDARAMSNSMSALYNPPSSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCRSQIQSTGGVYLS 1019 MVK A+IGCGLMG KIAG++A HGHRV+++DS++ LNSV +R++EDK+ L EGLL F G ILC+SRL E V DADFIFE V DD+ VK + IS L + I+ +N+LRLD + + + YKER +G+RFLYPVY+IPEVE++ TS T+ VR +LE MGKTLFFRS EPLIL ++QRE RR ++M S GI + +S + G+A S LY+ +CAIC+D RDCLL PC H++ C +CA LL R D CP+CR I VY S Sbjct: 1 MVKVAVIGCGLMGVKIAGEMAYHGHRVRIFDSNLNALNSVYQRLEEDKQTLRNEGLLPHKNFIGQILCLSRLEETVRDADFIFESVVDDLQVKQDLFERISHLCSPT-CIMASNSLRLDPSTIVDRAAYKERTVGLRFLYPVYYIPEVEISPNKYTSSPTIENVRTMLERMGKTLFFRSGDEPLILNEDQREARRLARIEQMRSSSGIGAYL--------EHSLPALSHKGNAPPPSED-DNLYS-DGDRDCAICMDRSRDCLLCPCHHMVTCNECAKSLLNRRDGCPICRKDITEIIRVYHS 292
BLAST of RING-type domain-containing protein vs. TrEMBL
Match: A0A0B7APH7 (RING-type domain-containing protein OS=Arion vulgaris OX=1028688 GN=ORF131763 PE=4 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 1.898e-75 Identity = 134/302 (44.37%), Postives = 187/302 (61.92%), Query Frame = 3 Query: 111 MVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSGSILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKTLFFRSRKEPLILTDEQRECRRELARQEMWRSGGIATSVCQ-VPELAASYSEGQWTSLGDARAMSNSMSALYNPPSSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCRSQIQSTGGVY 1013 MV A++G G MG KIAG+ A HGHRVK+YDS+ LN V +++D+K L +GLL Q F G + CMSRL E V DADFIFE +T+++ +K I IS + +I +NTLRLD+N ++E +K+R LG+RFL+PVY+IPE+E+ A T + +VR L+E MGKTLFFRS + PL+LT++QRE R+ +QE+ S + T + + VP L + +E T DA + M +CAIC+D RDCL PC H++ C +C +L R+D CP+CR I VY Sbjct: 1 MVHIAVVGAGQMGVKIAGEFAYHGHRVKIYDSNTATLNKVHVILEDDRKSLCADGLLPQQYFLGQVFCMSRLEETVKDADFIFEVITENLEIKKDIFERISH-CCKQNAVIASNTLRLDINLINERAMHKQRTLGLRFLFPVYYIPEIEIVPATLTDSTFIEKVRKLIEGMGKTLFFRSGQHPLVLTEKQREERKAARQQEIHLSSEVGTLMQRLVPALHHTGNESVHTLQRDAAVTPSYMDR--------DCAICMDRLRDCLFTPCHHMVTCYECGEILQRRHDACPICRKDIDKAVKVY 293
BLAST of RING-type domain-containing protein vs. TrEMBL
Match: A0A433TND5 (RING-type domain-containing protein OS=Elysia chlorotica OX=188477 GN=EGW08_009199 PE=4 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.333e-73 Identity = 132/304 (43.42%), Postives = 194/304 (63.82%), Query Frame = 3 Query: 111 MVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSGSILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKTLFFRSRKEPLILTDEQRECRRELARQEMWRSGGIATSVC-QVPELAASYSEGQWTSLGDARAMSNSMSALYNPPSS--GECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCRSQIQSTGGVY 1013 MV A+IG G+MG +IAG+LA HGHRVK+YD + LN V + + D K+L ++GL+TQ+ F G + CMS L E V DA+FI E V +D+ +K ++ DIS+ ++ +I +NT+ LD+N ++ +KER LG+RFL+PVY++PEVE+ A TS + +VR +LE MGKT+FFRS +PL+L++E RE R++ ++EM +S G+ V ++P L Y+ D M S++ PS+ ECAIC++ RDCLL+PC H++ C C ML R D CP+CR I T V+ Sbjct: 1 MVVVAVIGAGMMGARIAGELAYHGHRVKIYDKNPACLNKVHDILNTDTKQLREDGLITQAQFLGQVFCMSILEEVVRDAEFIVEAVVEDLEIKRELFHDISQSCKSD-ALIASNTMCLDINDINSKTSHKERTLGLRFLFPVYYVPEVEICPAKVTSSEVIERVRKMLEKMGKTMFFRSGLQPLVLSEEAREARKKARQEEMLQSCGVGAFVNRRIPSLKLEYN-------NDKEKMQKEDSSI---PSNFDHECAICMERVRDCLLQPCHHMVTCFPCGKMLQDRRDACPICRKDIDHTIRVF 293
BLAST of RING-type domain-containing protein vs. Ensembl Cavefish
Match: hadh (hydroxyacyl-CoA dehydrogenase [Source:NCBI gene;Acc:103033308]) HSP 1 Score: 61.6178 bits (148), Expect = 3.591e-10 Identity = 52/182 (28.57%), Postives = 82/182 (45.05%), Query Frame = 3 Query: 108 AMVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSGSIL--CMSRLYECVDDA------DFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGK 629 A+ +IG GLMG IA A GH V + D IL + I+ K ++K+ + L M + D A D + E + +++ VK + + + K+A E TI +NT L + ++ +RF G+ F PV + VEV A TSQ+T + +A+GK Sbjct: 21 AIKHITVIGGGLMGAGIAQVAATTGHSVVLVDMSEDILKKSAKSIEGSLKRVVKKKFADKPEAGEEFLQKAMKNISTSTDAAAVVQKTDLVVEAIVENLKVKQDLFSTLDKVA-PEHTIFASNTSSLPIADIASSTARLDRFGGLHFFNPVPMMKLVEVIKAPGTSQQTFDALIDFSKALGK 201
BLAST of RING-type domain-containing protein vs. Ensembl Cavefish
Match: ehhadh (enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase [Source:NCBI gene;Acc:103032907]) HSP 1 Score: 54.299 bits (129), Expect = 1.805e-7 Identity = 28/94 (29.79%), Postives = 51/94 (54.26%), Query Frame = 3 Query: 348 DFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGK 629 D + E V +DM +K ++ AD+S++ + T++CTNT LDV+Q++ +G+ F P + + +EV +S ++ L + MGK Sbjct: 372 DLVIEAVFEDMELKKRVFADLSRVCN-QNTMLCTNTSGLDVDQIASVTDRPPLVVGMHFFAPAHVMKLLEVVCGPRSSAEAVATAMSLGKRMGK 464
BLAST of RING-type domain-containing protein vs. Ensembl Cavefish
Match: mgrn1b (mahogunin, ring finger 1b [Source:ZFIN;Acc:ZDB-GENE-110401-3]) HSP 1 Score: 53.1434 bits (126), Expect = 3.822e-7 Identity = 23/47 (48.94%), Postives = 30/47 (63.83%), Query Frame = 3 Query: 843 NPPSSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCR 983 N +S EC +CL + RD L+ PCRHL LC CA L + + CP+CR Sbjct: 265 NSDNSNECVVCLSDLRDTLILPCRHLCLCNSCADTLRYQANNCPICR 311
BLAST of RING-type domain-containing protein vs. Ensembl Cavefish
Match: si:dkey-49c17.3 (ring finger protein 157 [Source:NCBI gene;Acc:103028420]) HSP 1 Score: 51.9878 bits (123), Expect = 9.494e-7 Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 3 Query: 852 SSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCR 983 +S EC +CL + RD L+ PCRHL LC CA L + + CP+CR Sbjct: 273 NSAECVVCLSDVRDTLILPCRHLCLCNACADTLRYQANCCPICR 316
BLAST of RING-type domain-containing protein vs. Ensembl Cavefish
Match: si:dkey-49c17.3 (ring finger protein 157 [Source:NCBI gene;Acc:103028420]) HSP 1 Score: 51.9878 bits (123), Expect = 1.000e-6 Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 3 Query: 852 SSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCR 983 +S EC +CL + RD L+ PCRHL LC CA L + + CP+CR Sbjct: 273 NSAECVVCLSDVRDTLILPCRHLCLCNACADTLRYQANCCPICR 316
BLAST of RING-type domain-containing protein vs. Ensembl Sea Lamprey
Match: hadh (hydroxyacyl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040801-261]) HSP 1 Score: 59.3066 bits (142), Expect = 4.399e-10 Identity = 47/176 (26.70%), Postives = 78/176 (44.32%), Query Frame = 3 Query: 126 IIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSGSILC--MSRLYECVDDA------DFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGK 629 ++G G MG IA A GH+V + D IL + I+ K ++K+ + + MS + D A D + E + +++ VK + + + K A E TI +NT L + ++ ++RF G+ F PV + VEV TS+ T + A+GK Sbjct: 34 VVGSGQMGAGIAQVAATTGHKVVIVDQTDDILQKAMKGIESSLKRVVKKTFGDNTEAGAKFMADTMSNISTSTDAAAVVHSCDLVLEAIVENLPVKQSLFSQLDKFA-PEETIFASNTSSLPITDIANSTSRQDRFGGLHFFNPVPVMKLVEVVETPMTSKATFEALTDFTIALGK 208
BLAST of RING-type domain-containing protein vs. Ensembl Sea Lamprey
Match: si:dkey-49c17.3 (ring finger protein 157 [Source:HGNC Symbol;Acc:HGNC:29402]) HSP 1 Score: 52.373 bits (124), Expect = 1.229e-7 Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 3 Query: 852 SSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCR 983 +S EC +CL + RD L+ PCRHL LC CA L + + CP+CR Sbjct: 273 NSTECVVCLSDIRDTLILPCRHLCLCSACADTLRYQANNCPICR 316
BLAST of RING-type domain-containing protein vs. Ensembl Sea Lamprey
Match: rffl (ring finger and FYVE-like domain containing E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2274]) HSP 1 Score: 47.7506 bits (112), Expect = 3.461e-6 Identity = 23/73 (31.51%), Postives = 33/73 (45.21%), Query Frame = 3 Query: 774 YSEGQWTSLGDARAMSNSMSALYNPPSSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCRSQI 992 Y + + + R N + PP C IC+D P DC+L C H++ C KC R CP+CR + Sbjct: 310 YRDTRQLDKTEMRHQRNGIRLTGGPPDENTCKICMDAPIDCVLLECGHMVTCTKCGK----RMSECPICRQYV 378
BLAST of RING-type domain-containing protein vs. Ensembl Sea Lamprey
Match: cryl1 (crystallin, lambda 1 [Source:ZFIN;Acc:ZDB-GENE-060810-7]) HSP 1 Score: 46.2098 bits (108), Expect = 7.314e-6 Identity = 49/188 (26.06%), Postives = 85/188 (45.21%), Query Frame = 3 Query: 108 AMVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSGS----ILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKTLFFRSRKEP 659 A +C + GL+G A A G V++YDS + + I+E+ K L G L S+ S I ++ L E V D++ EC+ +D+++K ++ + L RT++ ++T L + L +Y L + P YF+ VE+ T LS+ L+ +G+ R+ P Sbjct: 4 AACRCCVSYSGLIGRSWAMLFAAAGFPVRLYDSLPGVAEKALQDIRENLKSLAASGSLRGSLPVDSQLSLIQAVADLSEAVSGVDYVQECIPEDLSMKEELYRQLDPL-LGPRTVLASSTSCLLPSALFAQRRYPANCLVCHPVNPPYFVRLVELVPHAGTGGAALSRAHRLMRRLGQAPVTLRREIP 190
BLAST of RING-type domain-containing protein vs. Ensembl Nematostella
Match: EDO41282 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S4Z9]) HSP 1 Score: 191.815 bits (486), Expect = 1.506e-57 Identity = 119/303 (39.27%), Postives = 171/303 (56.44%), Query Frame = 3 Query: 123 AIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSGSILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKTLFFRSRKEPLILTDEQRECRRELARQEM--WRSGGIATSVCQVPEL----AASYSEGQWTSLGDARAMSNSMSALYNPPSSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCRSQIQSTGGVY 1013 A+IG GLMG IAG+LA HG RV +YD + E + + K++L +E ++ S F G++ L E V ++ IFE +++ VK + IS+ +I TNTL LD + ++EH+ ER LGIRFLYPVY IPEVE+TL TS T+ +V+ LE KTLFFRS K+PL+L+ Q E R++ RQ+ W G +T VP L A+ +++ ++ + S S A EC +C+DN RD +L PC HL +C +CA+ L L + CP+CR + S VY Sbjct: 9 AVIGAGLMGTCIAGELAYHGARVNLYDRSAQAMEKSKEMLIQQKEQLKREEVMATSDFIGTVAFCESLEEAVVNSGLIFEATIENLEVKKSVFKSISQFCRT-NAVIATNTLALDTSVVAEHVTNPERCLGIRFLYPVYSIPEVEITLGSQTSPETIQKVQQFLEGKQKTLFFRSGKKPLVLSHSQVEDRKKAQRQQTRNWIQEGRSTHDV-VPNLGHGVASRHAQASPIAMSSGKT-SQSTDAEEECSKESECVVCMDNRRDTVLCPCHHLCVCGQCAAALQLNEEPCPICRQAVASVIHVY 308
BLAST of RING-type domain-containing protein vs. Ensembl Nematostella
Match: EDO29655 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T309]) HSP 1 Score: 60.8474 bits (146), Expect = 2.315e-10 Identity = 50/193 (25.91%), Postives = 92/193 (47.67%), Query Frame = 3 Query: 117 KCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSGSILCMSRLYECVDDADF-----IFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKTLFFRSRKEPLILTDEQ 680 K ++G G+MG IA A+ G V + D I + + ++ + ++ G ++R+ V DADF I E V +D +KA + A + A ++ +I +NT L + L+ ++ +++F+G+ F PV +P VE+ + TS TL+ RG M + +K P+++ D + Sbjct: 2 KVGVLGAGMMGAGIAYVSAVAGIEVVLKDISIEAAEKGKDYSAKLLEKKVGRSQMSADKRDG---ILARIKPTVRDADFEGCDLIIEAVFEDRDLKANVTAAAERSALSD-AVIASNTSTLPITGLATAVQRQDKFIGLHFFSPVDKMPLVEIIKGEQTSDETLA--RGFDYVM------QIKKTPIVVNDSR 182
BLAST of RING-type domain-containing protein vs. Ensembl Nematostella
Match: EDO29372 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T3U0]) HSP 1 Score: 58.151 bits (139), Expect = 2.256e-9 Identity = 43/182 (23.63%), Postives = 84/182 (46.15%), Query Frame = 3 Query: 93 LSIKFAMVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSGSILCMSRL--YECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKT 632 +S F + + A+IG G MG I LA G +V D++ +L+ + + +K ++ + + C++ + Y + DAD + E V +++ +K QI + I+ +NT LD++ ++ K E+ LG+ F P + + +E+ T+ L L + +GK Sbjct: 1 MSKAFEVQQAAVIGAGTMGRGIVMSLANAGIQVLWLDNNPQMLDQAMAVVAQTNAHNVKLERISAEQSAARLACVTPVGDYVALADADLVIEAVYENLELKQQIFRTLDA-TLKPGAILASNTSALDIDAIAAVTKRPEQVLGLHFFSPAHIMKLLEIVRGGQTAPAVLDAAVTLGQRIGKV 181
BLAST of RING-type domain-containing protein vs. Ensembl Nematostella
Match: EDO38028 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SE55]) HSP 1 Score: 52.7582 bits (125), Expect = 1.447e-7 Identity = 22/46 (47.83%), Postives = 30/46 (65.22%), Query Frame = 3 Query: 861 ECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCRSQIQS 998 EC IC+ + RD L+ PCRHL LC+ CA L ++ CP+CRS + Sbjct: 266 ECVICMSDFRDTLILPCRHLCLCKACADSLRYQSSTCPICRSPFHA 311
BLAST of RING-type domain-containing protein vs. Ensembl Nematostella
Match: EDO46266 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQC1]) HSP 1 Score: 51.9878 bits (123), Expect = 2.163e-7 Identity = 49/184 (26.63%), Postives = 78/184 (42.39%), Query Frame = 3 Query: 108 AMVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSD----IVILNSVCXXXXXXXXXXXXXXXXTQSVFSGSILCMSRLYECVD------DADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGK 629 A+ + G GLMG IA A H V + D I L S+ ++ K+ K+ + F MSRL +D DAD + E + +++ K ++ + + A + I TNT + V +S +RF G+ F PV + VEV TS T + + + +GK Sbjct: 42 AIKNVTVFGGGLMGAGIAQVAAATDHNVTIVDQTNAILIKTLQSIERSMQRIAKKQFKDDVEAGKTFVAG--TMSRLKISLDVPGSVADADLVIEAIVENLRTKHKLFTALDE-AAPPQCIFATNTSSIPVADISSVTNRHDRFGGLHFFNPVPVMKLVEVVRTQQTSDDTFNTLLTFGKKLGK 222
BLAST of RING-type domain-containing protein vs. Ensembl Medaka
Match: hadh (hydroxyacyl-CoA dehydrogenase [Source:NCBI gene;Acc:101166688]) HSP 1 Score: 62.003 bits (149), Expect = 2.868e-10 Identity = 54/187 (28.88%), Postives = 83/187 (44.39%), Query Frame = 3 Query: 99 IKFAMVK-CAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILN----SVCXXXXXXXXXXXXXXXXTQSVFSGSIL----CMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKT 632 IK ++K IIG G MG IA A GH V + D+ IL + +K K+ + F ++L + V AD + E + +++ VK + + KLA A TI +NT L + ++ +RF G+ F PV + VEV +TSQ T + +A+GKT Sbjct: 17 IKNGVIKNVTIIGGGQMGAGIAQVAASTGHTVTLVDTSEDILKKSRKGIEGSLKRVVKKKFADKPEAGEEFIQNVLQNVSISTDAGASVQAADLLLEAIVENLKVKQDLFGHLDKLAPA-NTIFASNTSSLPITDIASSTSRLDRFGGLHFFNPVPMMKLVEVVGTSTTSQETFDSLLNFSKALGKT 202
BLAST of RING-type domain-containing protein vs. Ensembl Medaka
Match: ehhadh (enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase [Source:NCBI gene;Acc:101170799]) HSP 1 Score: 59.6918 bits (143), Expect = 3.377e-9 Identity = 30/100 (30.00%), Postives = 53/100 (53.00%), Query Frame = 3 Query: 330 ECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGK 629 E D D + E V +DMA+K ++ +S L T +C+NT LD++QL+ ++ E +G+ F P + + +EV +S + ++ L + MGK Sbjct: 366 EPAADVDLVIEAVFEDMALKKKVFQQLSALCKPG-TFLCSNTSGLDIDQLASETRHPELVVGMHFFAPAHVMKLLEVVYGSRSSPQAVATAMELGKQMGK 464
BLAST of RING-type domain-containing protein vs. Ensembl Medaka
Match: mgrn1b (mahogunin ring finger 1 [Source:NCBI gene;Acc:101157778]) HSP 1 Score: 53.1434 bits (126), Expect = 3.721e-7 Identity = 23/47 (48.94%), Postives = 30/47 (63.83%), Query Frame = 3 Query: 843 NPPSSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCR 983 N +S EC +CL + RD L+ PCRHL LC CA L + + CP+CR Sbjct: 269 NSDNSNECVVCLSDLRDTLILPCRHLCLCNSCADTLRYQANNCPICR 315
BLAST of RING-type domain-containing protein vs. Ensembl Medaka
Match: mgrn1b (mahogunin ring finger 1 [Source:NCBI gene;Acc:101157778]) HSP 1 Score: 53.1434 bits (126), Expect = 3.721e-7 Identity = 23/47 (48.94%), Postives = 30/47 (63.83%), Query Frame = 3 Query: 843 NPPSSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCR 983 N +S EC +CL + RD L+ PCRHL LC CA L + + CP+CR Sbjct: 269 NSDNSNECVVCLSDLRDTLILPCRHLCLCNSCADTLRYQANNCPICR 315
BLAST of RING-type domain-containing protein vs. Ensembl Medaka
Match: mgrn1b (mahogunin ring finger 1 [Source:NCBI gene;Acc:101157778]) HSP 1 Score: 52.7582 bits (125), Expect = 4.721e-7 Identity = 23/47 (48.94%), Postives = 30/47 (63.83%), Query Frame = 3 Query: 843 NPPSSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCR 983 N +S EC +CL + RD L+ PCRHL LC CA L + + CP+CR Sbjct: 269 NSDNSNECVVCLSDLRDTLILPCRHLCLCNSCADTLRYQANNCPICR 315
BLAST of RING-type domain-containing protein vs. Planmine SMEST
Match: SMESG000032694.1 (SMESG000032694.1) HSP 1 Score: 582.793 bits (1501), Expect = 0.000e+0 Identity = 301/303 (99.34%), Postives = 301/303 (99.34%), Query Frame = 3 Query: 111 MVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCXXXXXXXXXXXXXXXXTQSVFSGSILCMSRLYECVDDADFIFECVTDDMAVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKTLFFRSRKEPLILTDEQRECRRELARQEMWRSGGIATSVCQVPELAASYSEGQWTSLGDARAMSNSMSALYNPPSSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCRSQIQSTGGVYLS 1019 MVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCERIKEDKKELLKEGLLTQSVFSGSILCMSRL ECVDDADFIFECVTDDM VKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKTLFFRSRKEPLILTDEQRECRRELARQEMWRSGGIATSVCQVPELAASYSEGQWTSLGDARAMSNSMSALYNPPSSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCRSQIQSTGGVYLS Sbjct: 1 MVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCERIKEDKKELLKEGLLTQSVFSGSILCMSRLDECVDDADFIFECVTDDMVVKAQILADISKLATAERTIICTNTLRLDVNQLSEHLKYKERFLGIRFLYPVYFIPEVEVTLADSTSQRTLSQVRGLLEAMGKTLFFRSRKEPLILTDEQRECRRELARQEMWRSGGIATSVCQVPELAASYSEGQWTSLGDARAMSNSMSALYNPPSSGECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCRSQIQSTGGVYLS 303
BLAST of RING-type domain-containing protein vs. Planmine SMEST
Match: SMESG000002432.1 (SMESG000002432.1) HSP 1 Score: 50.0618 bits (118), Expect = 1.724e-6 Identity = 21/46 (45.65%), Postives = 30/46 (65.22%), Query Frame = 3 Query: 861 ECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCRSQIQS 998 +C IC+ + RD L+ PCRHL LC C LL ++ CP+CRS ++ Sbjct: 291 DCVICMASVRDTLVLPCRHLCLCSSCGEKLLHQSPSCPICRSTFRA 336
BLAST of RING-type domain-containing protein vs. Planmine SMEST
Match: SMESG000002432.1 (SMESG000002432.1) HSP 1 Score: 50.0618 bits (118), Expect = 1.839e-6 Identity = 21/46 (45.65%), Postives = 30/46 (65.22%), Query Frame = 3 Query: 861 ECAICLDNPRDCLLEPCRHLILCQKCASMLLLRNDYCPMCRSQIQS 998 +C IC+ + RD L+ PCRHL LC C LL ++ CP+CRS ++ Sbjct: 295 DCVICMASVRDTLVLPCRHLCLCSSCGEKLLHQSPSCPICRSTFRA 340 The following BLAST results are available for this feature:
BLAST of RING-type domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of RING-type domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of RING-type domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 4
BLAST of RING-type domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of RING-type domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of RING-type domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of RING-type domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of RING-type domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of RING-type domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of RING-type domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 4
BLAST of RING-type domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of RING-type domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of RING-type domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of RING-type domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 3
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30016599 ID=SMED30016599|Name=RING-type domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1349bpback to top protein sequence of SMED30016599-orf-1 >SMED30016599-orf-1 ID=SMED30016599-orf-1|Name=SMED30016599-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=304bp MVKCAIIGCGLMGCKIAGDLALHGHRVKMYDSDIVILNSVCERIKEDKKEback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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