General transcription factor II-I repeat domain-containing protein 2

Overview
NameGeneral transcription factor II-I repeat domain-containing protein 2
Smed IDSMED30016423
Length (bp)796
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of General transcription factor II-I repeat domain-containing protein 2 (SMED30016423) t-SNE clustered cells

Violin plots show distribution of expression levels for General transcription factor II-I repeat domain-containing protein 2 (SMED30016423) in cells (dots) of each of the 12 neoblast clusters.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30016423

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 3

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
whole organismSMED30016423 Contig37791newmark_estsPMID:27612384
Roberts-Galbraith et al., 2016		whole organism asexual adult colorimetric in situ hybridization evidence
whole organismSMED30016423 Contig37791uc_Smed_v2PMID:27612384
Roberts-Galbraith et al., 2016		whole organism asexual adult colorimetric in situ hybridization evidence
testis primordiumSMED30016423SMESG000043468.1 Contig3267_SE3GPL10652PMID:20844018
Wang et al., 2010		whole organism juvenile cDNA to DNA expression microarray evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Zebrafish
Match: AL928808.1 (pep chromosome:GRCz11:20:17257101:17259573:-1 gene:ENSDARG00000101333.2 transcript:ENSDART00000166397.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AL928808.1)

HSP 1 Score: 72.0182 bits (175), Expect = 7.821e-14
Identity = 51/162 (31.48%), Postives = 79/162 (48.77%), Query Frame = 1 
Query:   97 NTKRKIADEHRNFQENWELEYFCSEVNDKIICLICNSAIVH--QSYLMLXXXXXXXXXXXXXTKD**DSKLREFKL-----GLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPD--------KEMSLYRNIAVERVTD 537
              KRK  DE R F   WE  YF  E N K  CLIC +++ H   S L  +    +   +    K    S+LR+ K+       +KQ  +  K S+ SE V   SY L+  I +  KP+ +G+F+K C+ +A  I+ P+        K++ L R+   +R++D
Sbjct:    8 TAKRKYEDERRTFLSEWEDLYFFVERNGKPFCLICQTSLSHFKASNLERHFTSLHSAVAREFPK---GSELRKHKVKTLKGQAEKQTQLFRKFSKHSETVTLASYQLAWNIARAKKPYLEGEFVKKCLSDAVAILCPENENLKRSVKDLQLSRHTVEQRISD 166
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Xenopus
Match: spag1 (sperm associated antigen 1 [Source:Xenbase;Acc:XB-GENE-853609])

HSP 1 Score: 61.6178 bits (148), Expect = 3.370e-10
Identity = 40/131 (30.53%), Postives = 62/131 (47.33%), Query Frame = 1 
Query:  103 KRKIADEHRNFQENWELEYFCSEVNDKIICLICNSAI-------VHQSYLMLXXXXXXXXXXXXXTKD**DSKLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAE 474
            KRKI  E+R FQE WE EYF  +  DK  CL+C   I       V + Y  L+       +          + +++ K  L KQ+++ + V+   +A V  S+ +++ I K   PF+ G  +K C    AE
Sbjct:   17 KRKIDSENREFQEKWEEEYFFGKNKDKPQCLVCAQTISSCKEYNVKRHYTTLHGAKYAKYTGEARL-----TIIKDLKSKLCKQKNIFSAVTTTQKAAVKASFLVAEEIAKRKYPFSSGTLVKTCALKMAE 142
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Xenopus
Match: ENSXETT00000016563.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:4:37379994:37381838:-1 gene:ENSXETG00000009412.1 transcript:ENSXETT00000016563.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 61.6178 bits (148), Expect = 3.370e-10
Identity = 40/131 (30.53%), Postives = 62/131 (47.33%), Query Frame = 1 
Query:  103 KRKIADEHRNFQENWELEYFCSEVNDKIICLICNSAI-------VHQSYLMLXXXXXXXXXXXXXTKD**DSKLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAE 474
            KRKI  E+R FQE WE EYF  +  DK  CL+C   I       V + Y  L+       +          + +++ K  L KQ+++ + V+   +A V  S+ +++ I K   PF+ G  +K C    AE
Sbjct:   17 KRKIDSENREFQEKWEEEYFFGKNKDKPQCLVCAQTISSCKEYNVKRHYTTLHGAKYAKYTGEARL-----TIIKDLKSKLCKQKNIFSAVTTTQKAAVKASFLVAEEIAKRKYPFSSGTLVKTCALKMAE 142
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Xenopus
Match: ENSXETT00000028445.1 (general transcription factor II-I repeat domain-containing protein 2-like [Source:NCBI gene;Acc:101734469])

HSP 1 Score: 54.299 bits (129), Expect = 7.841e-8
Identity = 37/134 (27.61%), Postives = 69/134 (51.49%), Query Frame = 1 
Query:  106 RKIADEHRNFQENWELEYFCSEVNDKIICLICNS--AIVHQSYLMLXXXXXXXXXXXXXTKD**DSKLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPDKEMS 501
            RK+  E+R+F+E WEL+YF  + N K +CL+C+   A+  +  +  + I  +  +    T D   + L E +  L KQ+++ +  +    A +  S+ + + I K  + F   D +K C    A  V+ ++EM+
Sbjct:    7 RKVDSENRSFKERWELDYFFVKCNGKPLCLLCSQILAVCKEYNVKRHYISLHEKTYSQYTGDHRMAILNELRSKLNKQETVTSIETATDTAALKASFIICEEIVKRKQAFDSVDVVKECAVKMAR-VFGNEEMA 139
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. TrEMBL
Match: A0A087T5N2 (General transcription factor II-I repeat domain-containing protein 2 (Fragment) OS=Stegodyphus mimosarum OX=407821 GN=X975_26612 PE=4 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.046e-51
Identity = 90/163 (55.21%), Postives = 107/163 (65.64%), Query Frame = 1 
Query:   67 SMPLSTPNGSNTKRKIADEHRNFQENWELEYFCSEVNDKIICLICNSAI-VHQSYLMLXXXXXXXXXXXXXTKD**DSKLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPD-----KEMSLYRNIAVERVTD 537
            SM +S P+GS  KRKIADEHR FQ  WELEYFC E+ DKIICLICN+ I V + Y +      + +          + KL+E KLG+KKQQSM +KV +ESEA VH SY LS+LI KHSKPFT GDFIK C+  A EIV P      + +SL RN   ERVTD
Sbjct:    6 SMSISKPSGSKIKRKIADEHRIFQVKWELEYFCCEIKDKIICLICNNTINVPKLYNIKRHYEQHKSKYNNYEGLMREEKLKELKLGVKKQQSMFSKVLQESEAAVHASYVLSELIAKHSKPFTDGDFIKECLMKAGEIVCPGNVKAFQSISLSRNTVAERVTD 168

HSP 2 Score: 66.2402 bits (160), Expect = 3.046e-51
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 3 
Query:  633 LLLRECDKDFNIYEELLELVLIHGTTTAENIFNCVYELLQK*NLP 767
            + LR CDK+FNI+EELLEL+ + GTTT E+IF CV+ LLQK NLP
Sbjct:  205 VFLRSCDKNFNIFEELLELIPMPGTTTGEDIFTCVFGLLQKYNLP 249
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. TrEMBL
Match: A0A087TLA5 (General transcription factor II-I repeat domain-containing protein 2 (Fragment) OS=Stegodyphus mimosarum OX=407821 GN=X975_18867 PE=4 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.515e-51
Identity = 90/163 (55.21%), Postives = 107/163 (65.64%), Query Frame = 1 
Query:   67 SMPLSTPNGSNTKRKIADEHRNFQENWELEYFCSEVNDKIICLICNSAI-VHQSYLMLXXXXXXXXXXXXXTKD**DSKLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPD-----KEMSLYRNIAVERVTD 537
            SM +S P+GS  KRKIADEHR FQ  WELEYFC E+ DKIICLICN+ I V + Y +      + +          + KL+E KLG+KKQQSM +KV +ESEA VH SY LS+LI KHSKPFT GDFIK C+  A EIV P      + +SL RN   ERVTD
Sbjct:   26 SMSISKPSGSKIKRKIADEHRIFQVKWELEYFCCEIKDKIICLICNNTINVPKLYNIKRHYEQHKSKYNNYEGLMREEKLKELKLGVKKQQSMFSKVLQESEAAVHASYVLSELIAKHSKPFTDGDFIKECLMKAGEIVCPGNVKAFQSISLSRNTVAERVTD 188

HSP 2 Score: 66.2402 bits (160), Expect = 4.515e-51
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 3 
Query:  633 LLLRECDKDFNIYEELLELVLIHGTTTAENIFNCVYELLQK*NLP 767
            + LR CDK+FNI+EELLEL+ + GTTT E+IF CV+ LLQK NLP
Sbjct:  225 VFLRSCDKNFNIFEELLELIPMPGTTTGEDIFTCVFGLLQKYNLP 269
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. TrEMBL
Match: A0A087THJ5 (General transcription factor II-I repeat domain-containing protein 2 (Fragment) OS=Stegodyphus mimosarum OX=407821 GN=X975_22333 PE=4 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.642e-51
Identity = 90/163 (55.21%), Postives = 107/163 (65.64%), Query Frame = 1 
Query:   67 SMPLSTPNGSNTKRKIADEHRNFQENWELEYFCSEVNDKIICLICNSAI-VHQSYLMLXXXXXXXXXXXXXTKD**DSKLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPD-----KEMSLYRNIAVERVTD 537
            SM +S P+GS  KRKIADEHR FQ  WELEYFC E+ DKIICLICN+ I V + Y +      + +          + KL+E KLG+KKQQSM +KV +ESEA VH SY LS+LI KHSKPFT GDFIK C+  A EIV P      + +SL RN   ERVTD
Sbjct:  103 SMSISKPSGSKIKRKIADEHRIFQVKWELEYFCCEIKDKIICLICNNTINVPKLYNIKRHYEQHKSKYNNYEGLMREEKLKELKLGVKKQQSMFSKVLQESEAAVHASYVLSELIAKHSKPFTDGDFIKECLMKAGEIVCPGNVKAFQSISLSRNTVAERVTD 265

HSP 2 Score: 66.2402 bits (160), Expect = 4.642e-51
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 3 
Query:  633 LLLRECDKDFNIYEELLELVLIHGTTTAENIFNCVYELLQK*NLP 767
            + LR CDK+FNI+EELLEL+ + GTTT E+IF CV+ LLQK NLP
Sbjct:  302 VFLRSCDKNFNIFEELLELIPMPGTTTGEDIFTCVFGLLQKYNLP 346
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. TrEMBL
Match: A0A087TNT9 (General transcription factor II-I repeat domain-containing protein 2 (Fragment) OS=Stegodyphus mimosarum OX=407821 GN=X975_12510 PE=4 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.323e-51
Identity = 90/163 (55.21%), Postives = 107/163 (65.64%), Query Frame = 1 
Query:   67 SMPLSTPNGSNTKRKIADEHRNFQENWELEYFCSEVNDKIICLICNSAI-VHQSYLMLXXXXXXXXXXXXXTKD**DSKLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPD-----KEMSLYRNIAVERVTD 537
            SM +S P+GS  KRKIADEHR FQ  WELEYFC E+ DKIICLICN+ I V + Y +      + +          + KL+E KLG+KKQQSM +KV +ESEA VH SY LS+LI KHSKPFT GDFIK C+  A EIV P      + +SL RN   ERVTD
Sbjct:   38 SMSISKPSGSKIKRKIADEHRIFQVKWELEYFCCEIKDKIICLICNNTINVPKLYNIKRHYEQHKSKYNNYEGLMREEKLKELKLGVKKQQSMFSKVLQESEAAVHASYVLSELIAKHSKPFTDGDFIKECLMKAGEIVCPGNVKAFQSISLSRNTVAERVTD 200

HSP 2 Score: 65.855 bits (159), Expect = 5.323e-51
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 3 
Query:  633 LLLRECDKDFNIYEELLELVLIHGTTTAENIFNCVYELLQK*NLP 767
            + LR CDK+FNI+EELLEL+ + GTTT E+IF CV+ LLQK NLP
Sbjct:  237 VFLRSCDKNFNIFEELLELIPMPGTTTGEDIFTCVFGLLQKYNLP 281
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. TrEMBL
Match: A0A087U850 (General transcription factor II-I repeat domain-containing protein 2 (Fragment) OS=Stegodyphus mimosarum OX=407821 GN=X975_09267 PE=4 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.730e-51
Identity = 89/162 (54.94%), Postives = 106/162 (65.43%), Query Frame = 1 
Query:   70 MPLSTPNGSNTKRKIADEHRNFQENWELEYFCSEVNDKIICLICNSAI-VHQSYLMLXXXXXXXXXXXXXTKD**DSKLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPD-----KEMSLYRNIAVERVTD 537
            M +S P+GS  KRKIADEHR FQ  WELEYFC E+ DKIICLICN+ I V + Y +      + +          + KL+E KLG+KKQQSM +KV +ESEA VH SY LS+LI KHSKPFT GDFIK C+  A EIV P      + +SL RN   ERVTD
Sbjct:    1 MSISKPSGSKIKRKIADEHRIFQVKWELEYFCCEIKDKIICLICNNTINVPKLYNIKRHYEQHKSKYNNYEGLMREEKLKELKLGVKKQQSMFSKVLQESEAAVHASYVLSELIAKHSKPFTDGDFIKECLMKAGEIVCPGNVKAFQSISLSRNTVAERVTD 162

HSP 2 Score: 66.6254 bits (161), Expect = 6.730e-51
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 3 
Query:  633 LLLRECDKDFNIYEELLELVLIHGTTTAENIFNCVYELLQK*NLP 767
            + LR CDK+FNI+EELLEL+ + GTTT E+IF CV+ LLQK NLP
Sbjct:  199 VFLRSCDKNFNIFEELLELIPMPGTTTGEDIFTCVFGLLQKYNLP 243
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Cavefish
Match: ENSAMXT00000030525.1 (pep primary_assembly:Astyanax_mexicanus-2.0:1:12992682:12994541:1 gene:ENSAMXG00000035573.1 transcript:ENSAMXT00000030525.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 102.834 bits (255), Expect = 6.951e-27
Identity = 63/168 (37.50%), Postives = 90/168 (53.57%), Query Frame = 1 
Query:   67 SMPLSTPNGSNTKRKIADEHRNFQENWELEYFCSEVNDKIICLICNSAI-VHQSY-LMLXXXXXXXXXXXXXTKD**DSKLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPDKE-----MSLYRNIAVERVTDK*SD 549
            +M  S P     KRKI DEHR FQE WE+++F  E      CLIC   + VH+ Y L  +    +         D   +++   K  L +QQ    K ++E++A V  SY +S++I K  KPFT+G+F+K CI  AA IV P+K+     +SL  N   ER++D  SD
Sbjct:   52 NMSFSKPA---VKRKICDEHRQFQEKWEVQFFFVEHRGIPTCLICTEKVAVHKEYNLKRHYTTRHAEEYAKYQGDERANRVANLKTCLLRQQDFFKKATKENDAAVEASYVVSEMIAKAGKPFTEGEFVKKCILQAASIVCPEKKGQFSNISLSANTVAERISDLSSD 216

HSP 2 Score: 36.5798 bits (83), Expect = 6.951e-27
Identity = 16/45 (35.56%), Postives = 29/45 (64.44%), Query Frame = 3 
Query:  633 LLLRECDKDFNIYEELLELVLIHGTTTAENIFNCVYELLQK*NLP 767
            + +R  D +F + EELL ++ +HG TTA+ IF+ + + ++   LP
Sbjct:  249 IYVRGVDDNFEVTEELLTVIPMHGQTTAQEIFHQLCDAIENAGLP 293
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Cavefish
Match: ENSAMXT00000035253.1 (general transcription factor II-I repeat domain-containing protein 2B-like [Source:NCBI gene;Acc:111191579])

HSP 1 Score: 66.6254 bits (161), Expect = 2.659e-16
Identity = 45/150 (30.00%), Postives = 74/150 (49.33%), Query Frame = 1 
Query:  103 KRKIADEHRNFQENWELEYFCSEVNDKIICLICNSAI--VHQSYLMLXXXXXXXXXXXXXTKD**DSKLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPD-----KEMSLYRNIAVERV 531
            KRK+  + R FQ+ WE EY      ++ +CL+C  A+  + +  L  +    +       +        +E K  LK QQ++ TK + ++ A V  S+ +++ I + SK F+ G F+K C+    E V PD     K +SL RN   +RV
Sbjct:    4 KRKVDADGRLFQQRWEGEYMFVLQGERPVCLLCCEAVSVIKEYNLRRHFDTKHGAKYGKASLQEKQQIAQELKDKLKSQQNLFTKATAKNSAAVKASFIVAEEIARASKYFSGGAFLKQCMLKVCEQVCPDQIQTFKNVSLSRNTIADRV 153

HSP 2 Score: 36.965 bits (84), Expect = 2.659e-16
Identity = 14/41 (34.15%), Postives = 27/41 (65.85%), Query Frame = 3 
Query:  633 LLLRECDKDFNIYEELLELVLIHGTTTAENIFNCVYELLQK 755
            + +R    D ++ E+LL++  +HGTTT ++IF+ V + + K
Sbjct:  192 IFIRGVKSDLSVTEDLLDVAAMHGTTTGQDIFDAVEKSVSK 232
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Cavefish
Match: ENSAMXT00000052542.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000549.1:35642:40620:1 gene:ENSAMXG00000033785.1 transcript:ENSAMXT00000052542.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 70.4774 bits (171), Expect = 1.751e-13
Identity = 42/149 (28.19%), Postives = 75/149 (50.34%), Query Frame = 1 
Query:   94 SNTKRKIADEHRNFQENWELEYFCSEVNDKII-CLICNSAI-VHQSYLMLXXXXXXXXXXXXXTKD**DSKLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPDKEMSLYRNIAVERVT 534
            ++ KRK+  EHR F   W  +YF  E +  +  CL+C   + V + Y +     +       +  +    K+   K  L  QQ +  K  +ESEA    SY ++ L+ K ++PF  G+F+K C+  A +++ P+ +   ++NI++ R T
Sbjct:    3 TSKKRKVDLEHRKFNPEWTSKYFFYETSSAVFSCLVCLECVAVAKEYNLRRHYETKHPKLADLQGEDRKQKIEALKKQLVSQQGVFEKRRKESEACTIASYRIANLVAKSARPFIDGEFVKDCMLEACDVICPEAK-DAFKNISLSRTT 150
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Cavefish
Match: ENSAMXT00000038753.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000657.1:4925:12560:-1 gene:ENSAMXG00000034887.1 transcript:ENSAMXT00000038753.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 69.3218 bits (168), Expect = 5.101e-13
Identity = 46/152 (30.26%), Postives = 77/152 (50.66%), Query Frame = 1 
Query:  103 KRKIADEHRNFQENWELEYFCSEVNDKIICLICNSAI--VHQSYLMLXXXXXXXXXXXXXTKD**DSKLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPD-----KEMSLYRNIAVERVTD 537
            KRK+  + R FQ+ WE EY      ++ +CL+C  A+  + +  L  +    +       +        +E K  LK QQ++ TK + ++ A V  S+ +++ I + SK F++G F+K C+    E V PD     K +SL RN  V+RV +
Sbjct:    4 KRKVDADGRLFQQRWEGEYMFVLQGERPVCLLCCEAVSVIKEYNLRRHFDTKHGAKYGKASLQEKQQIAQELKDKLKSQQNLFTKATAKNSASVKASFIVAEEIARASKSFSEGAFLKQCMLKVCEQVCPDQIQTFKNVSLSRNTIVDRVKE 155
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Cavefish
Match: ENSAMXT00000048309.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000491.1:94927:99076:1 gene:ENSAMXG00000033081.1 transcript:ENSAMXT00000048309.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 45.8246 bits (107), Expect = 7.194e-10
Identity = 37/156 (23.72%), Postives = 66/156 (42.31%), Query Frame = 1 
Query:  109 KIADEHRNFQENWELEYFCSEVNDKIICLICNSAI-------VHQSYLMLXXXXXXXXXXXXXTKD**DSKLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAE------IVYPDKEMSLYRNIAVERVTD 537
            K+  E+R FQ  WE EY  +E   K +CL+C   +       + + Y  L+ +     +          + + + K  + KQQ   TK +   E+ +  SY ++  + +  KP + G+ +K C    A+      I    + +SL R     R+ D
Sbjct:   36 KLDRENRIFQTKWEEEYLFTEFKGKPMCLVCLETLSALKDYNLSRHYSTLHKVKYEKYTGAARA-----AVVADLKSKVGKQQHFFTKATTSQESAITASYDVALELARAKKPLSDGEVVKRCAVKMAKAFGDNNIAKNFETVSLSRRTVTRRIFD 186

HSP 2 Score: 36.1946 bits (82), Expect = 7.194e-10
Identity = 18/67 (26.87%), Postives = 34/67 (50.75%), Query Frame = 3 
Query:  543 IRLKQIHFVSKHSPLPVTRVRTLGAYPSSLLLLRECDKDFNIYEELLELVLIHGTTTAENIFNCVYE 743
            +++KQ+    ++  L +     +      L+  R  D  F+++ ELL+L  +H TT   +IFN  Y+
Sbjct:  193 VKMKQVMQDCQYFSLALDESTDVTDVSQLLVFARTIDNAFDVHRELLKLASLHDTTKGSDIFNRRYQ 259
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Medaka
Match: ENSORLT00000033014.1 (general transcription factor II-I repeat domain-containing protein 2 [Source:NCBI gene;Acc:101164918])

HSP 1 Score: 79.7221 bits (195), Expect = 2.147e-22
Identity = 48/151 (31.79%), Postives = 76/151 (50.33%), Query Frame = 1 
Query:  103 KRKIADEHRNFQENWELEYFCSEVNDKIICLICNSAI-VHQSYLMLXXXXXXXXXXXXXTKD**DSKLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPDKE-----MSLYRNIAVERVTD 537
            KRK+  E R FQ+ W+L YF +++ +  +CLIC   + V + + +     +   S   +T      KL + +  L  QQS+    S   +     SY ++ LI KH KPFT G+FIK C+    E + P+K+     + L  N  V+R+ D
Sbjct:    7 KRKVDYEGRRFQDRWKLAYFFTDIQNNCVCLICQDTVAVFKEFNIRRHYQTKHASYDNLTGVQRREKLEQLESALTTQQSICAIKSEPDDNTTQASYEVATLIAKHCKPFTDGEFIKDCLMKIVETICPEKKHEFANVCLDHNTVVQRIED 157

HSP 2 Score: 36.965 bits (84), Expect = 2.147e-22
Identity = 19/46 (41.30%), Postives = 27/46 (58.70%), Query Frame = 3 
Query:  630 LLLLRECDKDFNIYEELLELVLIHGTTTAENIFNCVYELLQK*NLP 767
            L+ LR  D+D N+ EELLEL  + G TT  ++F  +   +   NLP
Sbjct:  193 LIFLRGVDRDMNVSEELLELQGLTGQTTGTDLFVSLCSAVDDMNLP 238

HSP 3 Score: 27.7202 bits (60), Expect = 2.147e-22
Identity = 14/38 (36.84%), Postives = 21/38 (55.26%), Query Frame = 2 
Query:  536 ISDQIKANSFCFEAFSIACD*STNIGSISQFTAFITRV 649
            I  Q++     FE FS+ACD ST+  + +Q   F+  V
Sbjct:  162 IKRQLEVKGAKFEFFSLACDESTDASNTAQLLIFLRGV 199
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Medaka
Match: ENSORLT00000028655.1 (pep primary_assembly:ASM223467v1:8:18412528:18414615:1 gene:ENSORLG00000023148.1 transcript:ENSORLT00000028655.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 74.3294 bits (181), Expect = 8.006e-17
Identity = 45/139 (32.37%), Postives = 69/139 (49.64%), Query Frame = 1 
Query:  145 WELEYFCSEVNDKIICLICNSAIVHQSYLMLXXXXXXXXXXXXXTKD**DS-----KLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPDKE-----MSLYRNIAVERV 531
            WE EY  +EV+ K +CL+C   +       L              K+  D+     K+ E K GLK QQ++ T    +S A V  S+ +++ + K ++PFT+G+FIK C+    + V PDK      +SL RN   ER+
Sbjct:   24 WEAEYMFTEVHGKPVCLLCGERLSVMKEYNLRRHHETSKKHTDKDKNM-DTEQRLQKVEELKRGLKSQQALFTIAKSQSGAAVKASFIVAEEVEKSARPFTEGEFIKNCMLKVCDAVCPDKRQLFSNVSLSRNTVAERI 161

HSP 2 Score: 31.187 bits (69), Expect = 8.006e-17
Identity = 13/32 (40.62%), Postives = 21/32 (65.62%), Query Frame = 3 
Query:  633 LLLRECDKDFNIYEELLELVLIHGTTTAENIF 728
            + +R  D   +I EELL L  +HGTTT ++++
Sbjct:  200 IFIRGVDSSLSITEELLALRPLHGTTTGQDLY 231
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Medaka
Match: ENSORLT00000038238.1 (pep primary_assembly:ASM223467v1:3:5078314:5081250:-1 gene:ENSORLG00000025675.1 transcript:ENSORLT00000038238.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 55.4546 bits (132), Expect = 7.874e-12
Identity = 42/153 (27.45%), Postives = 71/153 (46.41%), Query Frame = 1 
Query:  103 KRKIADEHRNFQENWELEYFCSEVNDKIICLICNSA---IVHQSYLMLXXXXXXXXXXXXXTKD**DSKLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPD-----KEMSLYRNIAVERVTD 537
            + K+    R FQE W+ +Y      ++ +CL+C  A   +V +  L  ++   +       +        +E K  L+ QQS  TK + + EA V  S+ +++ I   SK F++G F+  C+    E V PD     K +SL +N    RV +
Sbjct:    8 REKVDANGRLFQERWDGKYLFVLEGERPVCLLCYEAVSLVVKEYNLRSHLDTKHGAKYAKASLQEKKQIAQELKGKLQSQQSFFTKSTVKEEASVKASFIMAEHIAHASKSFSEGAFLGQCMLKVYEQVCPDQLQTFKNVSLSQNTIAGRVKE 160

HSP 2 Score: 33.113 bits (74), Expect = 7.874e-12
Identity = 15/36 (41.67%), Postives = 24/36 (66.67%), Query Frame = 3 
Query:  630 LLLLRECDKDFNIYEELLELVLIHGTTTAENIFNCV 737
            LL+  +   D +I E+LL++  IHGTTT ++I + V
Sbjct:  173 LLMKAQTTLDLSITEKLLDVAAIHGTTTGQDIVDAV 208
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Medaka
Match: ENSORLT00000027093.1 (general transcription factor II-I repeat domain-containing protein 2B-like [Source:NCBI gene;Acc:111947639])

HSP 1 Score: 62.003 bits (149), Expect = 1.157e-11
Identity = 39/129 (30.23%), Postives = 70/129 (54.26%), Query Frame = 1 
Query:  154 EYFCSEVNDKIICLICNSAI-VHQSYLMLXXXXXXXXXXXXXTKD**DSKLREFKLG-LKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPDKEMSLYRNIAVERVT 534
            +YF +EV  + +CLIC + + V + Y +     +          D   +K  E  L  L+ QQ ++TK+     A V TS+ +S  I ++SKPF+ G+F+K C+ ++  ++ P+ + S + NI++ R T
Sbjct:    8 KYFFTEVKGEAVCLICGAKVAVFKDYNLNRHYTTKHEEKYRNLSDEERAKESEALLQKLQTQQGLLTKLHAPRNAAVRTSFVISHKIARNSKPFSDGEFVKECLLDSVALICPETK-SAFENISLSRRT 135

HSP 2 Score: 26.1794 bits (56), Expect = 1.157e-11
Identity = 13/40 (32.50%), Postives = 22/40 (55.00%), Query Frame = 2 
Query:  545 QIKANSFCFEAFSIACD*STNIGSISQFTAFITRVRQRFQ 664
            Q+K+ +  F+ FS+A D S +I   +Q   F+  +   FQ
Sbjct:  150 QLKSRAADFDCFSLALDESCDIRDTAQLLIFLRGITAEFQ 189
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Medaka
Match: ENSORLT00000038351.1 (pep primary_assembly:ASM223467v1:3:5078117:5081344:-1 gene:ENSORLG00000025675.1 transcript:ENSORLT00000038351.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 53.9138 bits (128), Expect = 2.037e-11
Identity = 42/151 (27.81%), Postives = 70/151 (46.36%), Query Frame = 1 
Query:  109 KIADEHRNFQENWELEYFCSEVNDKIICLICNSA---IVHQSYLMLXXXXXXXXXXXXXTKD**DSKLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPD-----KEMSLYRNIAVERVTD 537
            K+    R FQE W+ +Y      ++ +CL+C  A   +V +  L  ++   +       +        +E K  L+ QQS  TK + + EA V  S+ +++ I   SK F++G F+  C+    E V PD     K +SL +N    RV +
Sbjct:    4 KVDANGRLFQERWDGKYLFVLEGERPVCLLCYEAVSLVVKEYNLRSHLDTKHGAKYAKASLQEKKQIAQELKGKLQSQQSFFTKSTVKEEASVKASFIMAEHIAHASKSFSEGAFLGQCMLKVYEQVCPDQLQTFKNVSLSQNTIAGRVKE 154

HSP 2 Score: 33.113 bits (74), Expect = 2.037e-11
Identity = 15/36 (41.67%), Postives = 24/36 (66.67%), Query Frame = 3 
Query:  630 LLLLRECDKDFNIYEELLELVLIHGTTTAENIFNCV 737
            LL+  +   D +I E+LL++  IHGTTT ++I + V
Sbjct:  167 LLMKAQTTLDLSITEKLLDVAAIHGTTTGQDIVDAV 202
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Planmine SMEST
Match: SMESG000037770.1 (SMESG000037770.1)

HSP 1 Score: 63.929 bits (154), Expect = 4.165e-13
Identity = 42/150 (28.00%), Postives = 77/150 (51.33%), Query Frame = 1 
Query:  112 IADEHRNFQENWELEYFCSEVNDKIICLICNSAI-VHQSYLMLXXXXXXXXXXXXXTKD**DSKLR----EFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPD-----KEMSLYRNIAVERV 531
            I +E R F ++W  +YF  ++    +CLIC  ++ V + Y +     +   +  I   +   ++LR    +    LK++Q++  K S   EA    S  ++  I KH+KPF++G+F+K C+   A+I+ P+     + +SL R   V R+
Sbjct:  529 IEEECRTFNKDWTSKYFFVDIKTNAVCLICRESVAVFKEYNLKRHFQTKHGNFGINLNE---TELRRKADDLVRSLKQEQTIFLKPSSIQEAATKASLVIAHKIVKHNKPFSEGEFVKDCVLEIADIICPENKKKFENISLSRRTVVRRI 675

HSP 2 Score: 28.4906 bits (62), Expect = 4.165e-13
Identity = 16/42 (38.10%), Postives = 23/42 (54.76%), Query Frame = 2 
Query:  536 ISDQIKANSFCFEAFSIACD*STNIGSISQFTAFITRVRQRF 661
            +SDQ+      F+ FSIA D ST+I   +Q   FI  +  +F
Sbjct:  682 LSDQLLNKIKTFQWFSIALDESTDIQDTAQLLIFIRGIDDKF 723
[Close]
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Planmine SMEST
Match: SMESG000045419.1 (SMESG000045419.1)

HSP 1 Score: 50.447 bits (119), Expect = 6.723e-7
Identity = 42/149 (28.19%), Postives = 69/149 (46.31%), Query Frame = 1 
Query:   94 SNTKRKIADEHRNFQENWELEYFCSEVNDKIICLICNS--AIVHQSYLMLXXXXXXXXXXXXXTKD**DSKLREFKLGLKKQQSMITKVSRESEAVVHTSYFLSQLITKHSKPFTKGDFIKGCIRNAAEIVYPDKEMSLYRNIAVERVT 534
            S+ KRKIADE R F E W  +YF +E   K +CLI N   A++ +  +  +    +      +T +   +K R  K  L  QQS+  K                       +PFT  +F+K C+   AE + P+ + +L+++I++   T
Sbjct:    2 SSRKRKIADEGRVFNEEWNSKYFFTENGGKPLCLIFNKSVAVMKEYNVKRHYEKEHERQYKDLTGEIRKNKFRTLKASLTAQQSIFMK-----------------------RPFTDLEFVKRCLVAVAEKLCPETK-TLFQDISLSART 126
The following BLAST results are available for this feature:
BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
AL928808.17.821e-1431.48pep chromosome:GRCz11:20:17257101:17259573:-1 gene... [more]
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BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3
Match NameE-valueIdentityDescription
spag13.370e-1030.53sperm associated antigen 1 [Source:Xenbase;Acc:XB-... [more]
ENSXETT00000016563.13.370e-1030.53pep primary_assembly:Xenopus_tropicalis_v9.1:4:373... [more]
ENSXETT00000028445.17.841e-827.61general transcription factor II-I repeat domain-co... [more]
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BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A087T5N23.046e-5155.21General transcription factor II-I repeat domain-co... [more]
A0A087TLA54.515e-5155.21General transcription factor II-I repeat domain-co... [more]
A0A087THJ54.642e-5155.21General transcription factor II-I repeat domain-co... [more]
A0A087TNT95.323e-5155.21General transcription factor II-I repeat domain-co... [more]
A0A087U8506.730e-5154.94General transcription factor II-I repeat domain-co... [more]
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BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSAMXT00000030525.16.951e-2737.50pep primary_assembly:Astyanax_mexicanus-2.0:1:1299... [more]
ENSAMXT00000035253.12.659e-1630.00general transcription factor II-I repeat domain-co... [more]
ENSAMXT00000052542.11.751e-1328.19pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ENSAMXT00000038753.15.101e-1330.26pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ENSAMXT00000048309.17.194e-1023.72pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
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BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSORLT00000033014.12.147e-2231.79general transcription factor II-I repeat domain-co... [more]
ENSORLT00000028655.18.006e-1732.37pep primary_assembly:ASM223467v1:8:18412528:184146... [more]
ENSORLT00000038238.17.874e-1227.45pep primary_assembly:ASM223467v1:3:5078314:5081250... [more]
ENSORLT00000027093.11.157e-1130.23general transcription factor II-I repeat domain-co... [more]
ENSORLT00000038351.12.037e-1127.81pep primary_assembly:ASM223467v1:3:5078117:5081344... [more]
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BLAST of General transcription factor II-I repeat domain-containing protein 2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000037770.14.165e-1328.00SMESG000037770.1[more]
SMESG000045419.16.723e-728.19SMESG000045419.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30016423 ID=SMED30016423|Name=General transcription factor II-I repeat domain-containing protein 2|organism=Schmidtea mediterranea sexual|type=transcript|length=796bp
TTTTTTATTAAAATCTTTAATTATTTTAAATTAGTGTTTTTAAATTTATT
TCAAGTCTTTTTATTCAGTATGCCTTTATCGACGCCAAATGGCAGTAATA
CTAAACGAAAAATTGCTGACGAACATCGAAATTTTCAAGAAAACTGGGAA
TTAGAGTATTTTTGCTCTGAAGTAAATGATAAAATCATCTGCTTGATATG
TAATAGTGCTATAGTGCACCAAAGCTATTTAATGTTAAACGTCATTATGA
GCAACATAAATTCAAGTATAATAATTACGAAGGATTAATGAGACTCAAAG
TTAAGAGAGTTTAAGCTGGGACTGAAAAAACAACAGTCTATGATTACTAA
AGTGTCAAGAGAAAGTGAAGCAGTGGTGCATACAAGCTACTTTTTGTCGC
AGTTGATAACCAAGCACTCGAAACCTTTTACCAAAGGCGATTTCATCAAA
GGCTGTATAAGGAATGCTGCAGAAATTGTTTATCCAGATAAAGAAATGTC
TTTGTATCGAAATATCGCTGTGGAAAGAGTTACTGATAAGTGATCAGATT
AAAGCAAATTCATTTTGTTTCGAAGCATTCTCCATTGCCTGTGACTAGAG
TACGAACATTGGGAGCATATCCCAGTTCACTGCTTTTATTACGAGAGTGC
GACAAAGATTTCAACATCTACGAAGAATTATTGGAACTAGTGCTGATACA
TGGCACCACTACAGCAGAAAATATATTTAATTGTGTTTATGAACTTCTTC
AAAAATAAAATTTACCTCAGTCTAAAAAAAAAAAAAAAAAATGCGA
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000136whole organism
PLANA:0003304testis primordium
Vocabulary: molecular function
TermDefinition
GO:0003676nucleic acid binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.564