Zinc finger MYM-type protein 1

Overview
NameZinc finger MYM-type protein 1
Smed IDSMED30016372
Length (bp)628
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Zinc finger MYM-type protein 1 (SMED30016372) t-SNE clustered cells

Violin plots show distribution of expression levels for Zinc finger MYM-type protein 1 (SMED30016372) in cells (dots) of each of the 12 neoblast clusters.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30016372

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 4

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X2 cellSMED30016372 SmedASXL_019291SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
nervous systemSMED30016372 dd_Smed_v4_34529_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30016372 dd_Smed_v4_34529_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30016372 dd_Smed_v4_34529_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Zebrafish
Match: CR762475.1 (pep chromosome:GRCz11:4:55494751:55498830:1 gene:ENSDARG00000098243.2 transcript:ENSDART00000172605.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CR762475.1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.199e-17
Identity = 47/128 (36.72%), Postives = 71/128 (55.47%), Query Frame = 3 
Query:   93 LENDKSSKVSYMPLDIENKSKLVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKIDK*KVEVIEVFLGFLPLKRKSR*SK**NS*KA*KD-GLNIIMYRSQRYDNVALMSGVHVGVQAIIKAKNKK 473
            L +++S     M L    +SK+ NEIK A+ F I+ D T D+SH +Q+S VVR+V+     +EV E FL    L+  +            +D GL++   R Q YD  A MSG++ G+Q+ I+A N+K
Sbjct:  374 LLSNRSQNDIIMSLGTFIRSKIQNEIKEAQIFSILLDETTDVSHKEQVSFVVRYVR----DMEVKERFLQVCTLESTTGKELENVVISLLQDNGLDLKNIRGQGYDGAANMSGMYKGLQSRIRAHNEK 497

HSP 2 Score: 34.2686 bits (77), Expect = 1.199e-17
Identity = 14/29 (48.28%), Postives = 21/29 (72.41%), Query Frame = 1 
Query:    1 EREGLTNKGNFLELLKLLSKYDVVLKEHI 87
            E     N+GNF+EL+K L++YD V+K H+
Sbjct:  329 ESSSSANQGNFIELVKTLAQYDSVMKLHL 357

HSP 3 Score: 31.5722 bits (70), Expect = 1.199e-17
Identity = 11/26 (42.31%), Postives = 17/26 (65.38%), Query Frame = 2 
Query:  548 ISFFGTVESIFTFCSASTSRWQMFIK 625
            ++FF  VE ++ FC+ ST R   F+K
Sbjct:  523 VTFFSLVEKLYVFCTGSTKRHTAFLK 548
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Xenopus
Match: ENSXETT00000043220.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:7:36411169:36451375:1 gene:ENSXETG00000018966.1 transcript:ENSXETT00000043220.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 62.003 bits (149), Expect = 1.559e-16
Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 3 
Query:  156 LVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKIDK*KVEVIEVFLGFLP-LKRKSR*SK**NS*KA*KDGL-----NIIMYRSQRYDNVALMSGVHVGVQAIIKAKN 467
            ++NE K AKY+ I  DSTPD+SH DQ++ ++ +VK D       E F+ F+P +  K+      N   A  D L     +I+  R Q YDN + MSG + G+QA IK  N
Sbjct:  238 IINEAKQAKYYSISVDSTPDVSHTDQLAFIICYVKNDGIPK---ERFIKFIPNVGHKAE-----NLFSAVMDTLKEYHIDILDCRGQSYDNASNMSGPYSGLQARIKQVN 339

HSP 2 Score: 31.9574 bits (71), Expect = 1.559e-16
Identity = 12/28 (42.86%), Postives = 20/28 (71.43%), Query Frame = 2 
Query:  545 CISFFGTVESIFTFCSASTSRWQMFIKH 628
             +SFF  ++ ++ F SAS++RW+M I H
Sbjct:  366 AVSFFCILQQLYHFFSASSTRWEMLISH 393

HSP 3 Score: 28.1054 bits (61), Expect = 1.559e-16
Identity = 12/29 (41.38%), Postives = 19/29 (65.52%), Query Frame = 1 
Query:    1 EREGLTNKGNFLELLKLLSKYDVVLKEHI 87
            E+ G    GN+L LL+ ++++D  L EHI
Sbjct:  176 EKFGSLTNGNYLMLLEAIAEHDPFLAEHI 204

HSP 4 Score: 21.557 bits (44), Expect = 1.559e-16
Identity = 8/20 (40.00%), Postives = 12/20 (60.00%), Query Frame = 1 
Query:  454 LKQKTKKEVFVACIDHSINL 513
            +KQ     V++ C  HS+NL
Sbjct:  335 IKQVNPLAVYIPCSAHSLNL 354
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. TrEMBL
Match: A0A212FKU0 (Putative zinc finger MYM domain containing 1 OS=Danaus plexippus plexippus OX=278856 GN=KGM_213716 PE=4 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.257e-31
Identity = 70/116 (60.34%), Postives = 81/116 (69.83%), Query Frame = 3 
Query:  135 DIENKSKLVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKIDK*KVEVIEVFLGFLPLKRK------SR*SK**NS*KA*KDGLNIIMYRSQRYDNVALMSGVHVGVQAIIKAK 464
            D  + S+LVNEIK AKYFGIMFDSTPD SH+DQ+SEV+R+VKI   KVEV EVFLGF PL  K      +   K     K   DGL+I+M RSQ YDN A+MS +H GVQAIIK K
Sbjct:  159 DSRHLSQLVNEIKSAKYFGIMFDSTPDCSHIDQMSEVIRYVKIYNRKVEVKEVFLGFFPLHEKKAADLSAEILK-----KLENDGLDIMMCRSQGYDNAAVMSDIHGGVQAIIKEK 269
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. TrEMBL
Match: A0A0B7BQI5 (DUF4371 domain-containing protein OS=Arion vulgaris OX=1028688 GN=ORF200722 PE=4 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.296e-30
Identity = 68/113 (60.18%), Postives = 80/113 (70.80%), Query Frame = 3 
Query:  147 KSKLVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKIDK*KVEVIEVFLGFLPLKRKSR*SK**NS*KA*K-DGLNIIMYRSQRYDNVALMSGVHVGVQAIIKAKNKKRSF 482
            K  LVN IK A+YFGIMFDSTPDISH DQ+SEV+R+VKI   +VEV EVFLGF  LK K       +  K  + DGL+I+M R+Q YDN   MSG+H GVQAI+K KNKK  F
Sbjct:   97 KEILVNYIKAARYFGIMFDSTPDISHTDQMSEVIRYVKIHNGEVEVREVFLGFFHLKGKKADDLSSDILKNLESDGLDIMMCRAQGYDNAVTMSGIHGGVQAILKRKNKKAIF 209

HSP 2 Score: 63.5438 bits (153), Expect = 3.054e-10
Identity = 69/211 (32.70%), Postives = 106/211 (50.24%), Query Frame = 1 
Query:   19 NKGNFLELLKLLSKYDVVLKEHILIWRMINHQKYHTCR*I*KINLNLSTKLNWQNILVSCLIAHPIFHMLIKYLK-------WFDL*KLI---NEKSKS*KYS-------------LDFYP*K-ERADDLSDEILKKLER-MV*IL*CIVL---NVMIM*LL*AAYM*EYKPLLKQKTKKEVFVACIDHSINLGSQPSFAQIILYIIFWNS 567
            NKGNFLE++++LSKYD VLKEH++  R+    K  T   +      LS +   QN  ++ L  H +  +L+ Y+K        FD    I   ++ S+  +Y              L F+  K ++ADDLS +ILK LE   + I+ C      N + M    +      + +LK+K KK +F  C+DHS+NL  Q SFA+  L + F+ +
Sbjct:   40 NKGNFLEMVEMLSKYDPVLKEHLM--RL----KRTTSVTVKASAYYLSPET--QNEFITVLANH-VKEILVNYIKAARYFGIMFDSTPDISHTDQMSEVIRYVKIHNGEVEVREVFLGFFHLKGKKADDLSSDILKNLESDGLDIMMCRAQGYDNAVTM----SGIHGGVQAILKRKNKKAIFNGCVDHSLNLCGQHSFAENALCVTFFGT 237

HSP 3 Score: 29.261 bits (64), Expect = 3.054e-10
Identity = 10/19 (52.63%), Postives = 17/19 (89.47%), Query Frame = 2 
Query:  545 CISFFGTVESIFTFCSAST 601
            C++FFGT+E +++F +AST
Sbjct:  231 CVTFFGTLERMYSFFAAST 249
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. TrEMBL
Match: A0A1B6DAI5 (Uncharacterized protein OS=Clastoptera arizonana OX=38151 GN=g.510 PE=4 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.314e-28
Identity = 61/145 (42.07%), Postives = 82/145 (56.55%), Query Frame = 3 
Query:  111 SKVSYMPLDIEN----------KSKLVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKIDK*KVEVIEVFLGFLPLKRKSR*SK**NS*KA*K-----------DGLNIIMYRSQRYDNVALMSGVHVGVQAIIKAKNKKRSF 482
            + V+Y+   I+N          K  ++ EI+ AKY+GI+FDSTPDIS  DQ+SEV+R+V I   KV++ E FLGF  L+ K          KA +           DGL+I + RSQ YDN A M+G+H GVQA I+  N K  F
Sbjct:  377 ATVTYLSPQIQNEFILLLGMTVKDVIIKEIREAKYYGILFDSTPDISRKDQMSEVIRYVHIQDGKVQIKESFLGFFVLQGK----------KADEVTEEILTALESDGLDIALCRSQGYDNAATMAGIHSGVQARIQNINPKALF 511

HSP 2 Score: 40.4318 bits (93), Expect = 2.314e-28
Identity = 17/24 (70.83%), Postives = 23/24 (95.83%), Query Frame = 1 
Query:   19 NKGNFLELLKLLSKYDVVLKEHIL 90
            N+GNFLEL++LLS+YD VL+EHI+
Sbjct:  343 NRGNFLELVQLLSQYDPVLREHII 366

HSP 3 Score: 34.2686 bits (77), Expect = 2.314e-28
Identity = 13/26 (50.00%), Postives = 20/26 (76.92%), Query Frame = 2 
Query:  542 SCISFFGTVESIFTFCSASTSRWQMF 619
            S ++FFGT+E+I+   SAST RW++ 
Sbjct:  532 SSLTFFGTLENIYNLFSASTHRWEIL 557
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. TrEMBL
Match: A0A087UAK3 (Zinc finger MYM-type protein 1 (Fragment) OS=Stegodyphus mimosarum OX=407821 GN=X975_19461 PE=4 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.263e-26
Identity = 59/148 (39.86%), Postives = 83/148 (56.08%), Query Frame = 3 
Query:  117 VSYMPLDIEN----------KSKLVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKIDK*KVEVIEVFLGFLPLKRKSR-------*SK**NS*KA*KDGLNIIMYRSQRYDNVALMSGVHVGVQAIIKAKNKKRSF-CCMY*SFN 506
            +SY+   I+N          +  ++++IK AKYF I+FDSTPDISH DQ S+++R+V ID  +V+V+E F+GF+  K K+         +K  N      +GL+I   R Q YDN A+M+G H GVQ  IK  N    F  C   S N
Sbjct:  230 ISYLSPKIQNEFIELLGGAVRKTIMDQIKQAKYFCIIFDSTPDISHKDQNSQIIRYVVIDGSEVKVVESFIGFVETKGKTAGEITDMILTKLDN------NGLDIKNCRGQTYDNAAVMAGKHSGVQTRIKEINPNAEFVACTNHSLN 371

HSP 2 Score: 42.3578 bits (98), Expect = 1.263e-26
Identity = 18/34 (52.94%), Postives = 27/34 (79.41%), Query Frame = 1 
Query:    7 EGLTNKGNFLELLKLLSKYDVVLKEHILIWRMIN 108
            + + N+GNFLEL+ LL+KYD VL+EH++  +M N
Sbjct:  193 DSMENRGNFLELVDLLAKYDPVLREHVVKIKMGN 226

HSP 3 Score: 35.4242 bits (80), Expect = 1.263e-26
Identity = 12/28 (42.86%), Postives = 21/28 (75.00%), Query Frame = 2 
Query:  539 LSCISFFGTVESIFTFCSASTSRWQMFI 622
            ++ I+FFGT+E +F+  S+ST RW + +
Sbjct:  382 INSITFFGTIEQLFSLFSSSTHRWNVLL 409
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. TrEMBL
Match: A0A4C1SXH1 (DUF4371 domain-containing protein OS=Eumeta variegata OX=151549 GN=EVAR_92782_1 PE=4 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.359e-26
Identity = 62/105 (59.05%), Postives = 73/105 (69.52%), Query Frame = 3 
Query:  132 LDIENKSKLVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKIDK*KVEVIEVFLGFLPLKRK------SR*SK**NS*KA*KDGLNIIMYRSQRYDNVALMSG 428
            LD+  + KLVNEIK AKYFGIMFDSTPD+SHVD +SEV+R+VKI+  KVEV EVFLGF PL  K      +   K     K   DGL+I+M RSQ YDN A+MS 
Sbjct:  127 LDMVQRLKLVNEIKSAKYFGIMFDSTPDVSHVDHMSEVIRYVKINNRKVEVKEVFLGFFPLHGKKAADLSAEILK-----KLENDGLDIMMCRSQDYDNAAVMSA 226
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Cavefish
Match: ENSAMXT00000035531.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000029.1:6285841:6288423:1 gene:ENSAMXG00000041958.1 transcript:ENSAMXT00000035531.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 71.2478 bits (173), Expect = 3.438e-20
Identity = 45/108 (41.67%), Postives = 65/108 (60.19%), Query Frame = 3 
Query:  147 KSKLVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKIDK*KVEVIEVFLGFLPLKRKSR*SK**NS*KA*KD-GLNIIMYRSQRYDNVALMSGVHVGVQAIIKAKN 467
            K  +VN+IK +KYF ++ DSTPD++HVDQ + + RFV  D     V+E FL F P++  S  S         ++ GL++   R Q YDN + MSG + GVQA +K +N
Sbjct:  365 KQAIVNKIKESKYFSVIVDSTPDLAHVDQPTFIFRFVNND---AHVVERFLAFEPIENHSGDSLAECVVAMVENLGLDLSNCRGQSYDNASNMSGKYNGVQAHLKQRN 469

HSP 2 Score: 31.5722 bits (70), Expect = 3.438e-20
Identity = 13/26 (50.00%), Postives = 19/26 (73.08%), Query Frame = 1 
Query:   10 GLTNKGNFLELLKLLSKYDVVLKEHI 87
            G  + GNFL +++LLSK+D  L EH+
Sbjct:  309 GSAHNGNFLGIIELLSKFDPFLAEHL 334

HSP 3 Score: 30.0314 bits (66), Expect = 3.438e-20
Identity = 11/25 (44.00%), Postives = 18/25 (72.00%), Query Frame = 2 
Query:  554 FFGTVESIFTFCSASTSRWQMFIKH 628
            FF  V+++FTFC++ST RW+   + 
Sbjct:  499 FFDFVQAMFTFCASSTHRWRKVFRD 523

HSP 4 Score: 22.3274 bits (46), Expect = 3.438e-20
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 1 
Query:  454 LKQKTKKEVFVACIDHSINL 513
            LKQ+     +V C  HS+NL
Sbjct:  465 LKQRNSLICYVPCAAHSLNL 484
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Cavefish
Match: ENSAMXT00000042715.1 (pep primary_assembly:Astyanax_mexicanus-2.0:16:11855083:11857132:-1 gene:ENSAMXG00000035113.1 transcript:ENSAMXT00000042715.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 73.9442 bits (180), Expect = 6.923e-20
Identity = 45/108 (41.67%), Postives = 66/108 (61.11%), Query Frame = 3 
Query:  147 KSKLVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKIDK*KVEVIEVFLGFLPLKRKSR*SK**NS*KA*KD-GLNIIMYRSQRYDNVALMSGVHVGVQAIIKAKN 467
            K  +VNEIK +KYF ++ DSTPD++HVDQ++ + RFV  D     V+E FL F P++  S  S         ++ GL++   R Q YDN + MSG + G+QA +K +N
Sbjct:  206 KQAIVNEIKESKYFSVIVDSTPDLAHVDQLTFIFRFVNNDG---HVVERFLAFEPIENHSGDSLAECVVAMVENLGLDLSNCRGQSYDNASNMSGKYNGIQAHLKQRN 310

HSP 2 Score: 30.0314 bits (66), Expect = 6.923e-20
Identity = 12/26 (46.15%), Postives = 19/26 (73.08%), Query Frame = 1 
Query:   10 GLTNKGNFLELLKLLSKYDVVLKEHI 87
            G  + GNFL +++LL+K+D  L EH+
Sbjct:  150 GSAHNGNFLGIIELLAKFDPFLAEHL 175

HSP 3 Score: 28.8758 bits (63), Expect = 6.923e-20
Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = 2 
Query:  554 FFGTVESIFTFCSASTSRW 610
            FF  V++++TFC++ST RW
Sbjct:  340 FFDFVQAMYTFCASSTHRW 358

HSP 4 Score: 21.557 bits (44), Expect = 6.923e-20
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 1 
Query:  454 LKQKTKKEVFVACIDHSINL 513
            LKQ+     +V C  HS+NL
Sbjct:  306 LKQRNPLICYVPCAAHSLNL 325
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Cavefish
Match: ENSAMXT00000044961.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000032.1:419978:423709:1 gene:ENSAMXG00000036481.1 transcript:ENSAMXT00000044961.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 57.7658 bits (138), Expect = 2.285e-14
Identity = 50/155 (32.26%), Postives = 75/155 (48.39%), Query Frame = 3 
Query:  102 DKSSKVSYMPLDIENK------SKLVNEI----KLAKYFGIMFDSTPDISHVDQISEVVRFVKIDK*KVEVIEVFLGFLPLKRKSR*SK**NS*KA---------*KDGLNIIMYRSQRYDNVALMSGVHVGVQA-IIKAKNKKRSFCCMY*SFN 506
            ++ +KV Y+   I+N+      +K++ EI    + AKY+ ++ D TPDISH +Q+S V+R V  D   V + E F GF+ ++  S         K           K  L+I   R Q YDN + M G   GVQA I++  NK     C   + N
Sbjct:  269 NQEAKVHYLSGTIQNEIIALIGNKVLEEIVRRAQRAKYYSVIMDCTPDISHKEQLSVVLRLVNCDP-SVSIAEHFFGFIDVEDTSG--------KGLTEVLLDHLQKHNLSISDCRGQSYDNGSNMMGQKQGVQARILQLNNKALCIPCSSHTLN 414

HSP 2 Score: 30.0314 bits (66), Expect = 2.285e-14
Identity = 14/33 (42.42%), Postives = 23/33 (69.70%), Query Frame = 1 
Query:   19 NKGNFLELLKLLSKYDVVLKEHILIWRMINHQK 117
            + GNFL  ++L++K+D V+ EHI   R I +Q+
Sbjct:  242 HNGNFLAQVELMAKFDPVMNEHI---RRIQNQE 271

HSP 3 Score: 28.4906 bits (62), Expect = 2.285e-14
Identity = 10/26 (38.46%), Postives = 16/26 (61.54%), Query Frame = 2 
Query:  551 SFFGTVESIFTFCSASTSRWQMFIKH 628
            SFFG ++ ++   S+S  RW +  KH
Sbjct:  429 SFFGVLQRLYNLFSSSVQRWAVLRKH 454
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Cavefish
Match: ENSAMXT00000042930.1 (pep primary_assembly:Astyanax_mexicanus-2.0:12:25471427:25473738:-1 gene:ENSAMXG00000037442.1 transcript:ENSAMXT00000042930.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 59.6918 bits (143), Expect = 4.064e-13
Identity = 45/143 (31.47%), Postives = 77/143 (53.85%), Query Frame = 3 
Query:  102 DKSSKVSYMPLDIENK----------SKLVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKIDK*K------VEVIEVFLGFLPLKRK------SR*SK**NS*KA*KDGLNIIMYRSQRYDNVALMSGVHVGVQAIIKAK 464
            DK S V+Y+   I+N+           ++V+EIK A+++ ++ D+T D+S VDQ+S+V R+V + K +      V++ E FLGF  +  +      ++ ++   S     +GL +   R Q YD  + MSG++ GVQ  I  K
Sbjct:  127 DKKSNVNYLSPSIQNELIALLSQRVHDEIVSEIKEAEFYSVIMDTTQDLSKVDQLSQVFRYVTVRKDEADNAIAVDINESFLGFQNISDQTAQGLETKITELIQS-----NGLLLHKCRGQGYDGASTMSGIYSGVQKRILDK 264

HSP 2 Score: 32.7278 bits (73), Expect = 4.064e-13
Identity = 14/27 (51.85%), Postives = 20/27 (74.07%), Query Frame = 1 
Query:    1 EREGLTNKGNFLELLKLLSKYDVVLKE 81
            E+ G  N GNFL ++ LL++YD VL+E
Sbjct:   98 EKVGELNSGNFLSVIDLLARYDPVLRE 124
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Cavefish
Match: ENSAMXT00000036272.1 (pep primary_assembly:Astyanax_mexicanus-2.0:20:11935414:11938921:1 gene:ENSAMXG00000041670.1 transcript:ENSAMXT00000036272.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 55.4546 bits (132), Expect = 4.380e-13
Identity = 45/152 (29.61%), Postives = 68/152 (44.74%), Query Frame = 3 
Query:  102 DKSSKVSYMPLDIENK----------SKLVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKIDK*KVEVIEVFLGFLPLKRKSR*SK**NS*KA*KDGLNIIMY---------------RSQRYDNVALMSGVHVGVQAIIKAKNKKRSF 482
            D +S+  Y+    +N+            +V +IK AKY+ I+ D TPDISH +Q+S VVR V++   +  + E FLG++ +   +              GLN+                  R Q YDN A M G   GVQA +   N + +F
Sbjct:  295 DDASRTHYLGQQTQNEIIEIICSQTIQTIVAKIKQAKYYAIILDCTPDISHKEQMSLVVRIVELVP-EPHIREYFLGYMNVVETT--------------GLNLSNVVLEKLRALGIPFEDCRGQAYDNGANMKGKRQGVQARLLQLNPRAAF 431

HSP 2 Score: 36.965 bits (84), Expect = 4.380e-13
Identity = 13/27 (48.15%), Postives = 20/27 (74.07%), Query Frame = 2 
Query:  548 ISFFGTVESIFTFCSASTSRWQMFIKH 628
            IS+FG ++ +F F SA+T RW + +KH
Sbjct:  454 ISYFGYLQRLFCFFSAATQRWDILLKH 480
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Medaka
Match: ENSORLT00000028133.1 (zinc finger MYM-type protein 1-like [Source:NCBI gene;Acc:111948955])

HSP 1 Score: 57.3806 bits (137), Expect = 8.823e-14
Identity = 43/114 (37.72%), Postives = 65/114 (57.02%), Query Frame = 3 
Query:  150 SKLVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKIDK*KVEVIEVFLGFLPLKRKS---R*SK**NS*KA*KDGLNIIMYRSQRYDNVALMSGVHVGVQAIIKAKNKKRSF 482
            S +V++IK AKYF I+ D T DISH +Q+S ++R V + + K ++ E F+GFL  +  +     S   N  +  + G++    R Q YDN A M G + GVQA +  KN +  F
Sbjct:  353 SAIVDDIKKAKYFSIILDCTLDISHTEQLSVIIRVVSLME-KPQIREHFMGFLEAEESTGQHLASMILN--RLEELGISFEDCRGQSYDNGANMKGKNKGVQARLLEKNPRALF 463

HSP 2 Score: 28.8758 bits (63), Expect = 8.823e-14
Identity = 9/27 (33.33%), Postives = 17/27 (62.96%), Query Frame = 2 
Query:  539 LSCISFFGTVESIFTFCSASTSRWQMF 619
            +  +S+FG ++ ++T  SAS  RW + 
Sbjct:  483 VDAMSYFGVLQKLYTLFSASAQRWAIL 509

HSP 3 Score: 28.1054 bits (61), Expect = 8.823e-14
Identity = 8/24 (33.33%), Postives = 21/24 (87.50%), Query Frame = 1 
Query:   16 TNKGNFLELLKLLSKYDVVLKEHI 87
            ++ GNFL+ ++L++++D ++K+H+
Sbjct:  298 SSNGNFLKEVELMARFDPIMKDHL 321
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Medaka
Match: ENSORLT00000042294.1 (zinc finger MYM-type protein 1-like [Source:NCBI gene;Acc:110016639])

HSP 1 Score: 57.3806 bits (137), Expect = 8.823e-14
Identity = 43/114 (37.72%), Postives = 65/114 (57.02%), Query Frame = 3 
Query:  150 SKLVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKIDK*KVEVIEVFLGFLPLKRKS---R*SK**NS*KA*KDGLNIIMYRSQRYDNVALMSGVHVGVQAIIKAKNKKRSF 482
            S +V++IK AKYF I+ D T DISH +Q+S ++R V + + K ++ E F+GFL  +  +     S   N  +  + G++    R Q YDN A M G + GVQA +  KN +  F
Sbjct:  353 SAIVDDIKKAKYFSIILDCTLDISHTEQLSVIIRVVSLME-KPQIREHFMGFLEAEESTGQHLASMILN--RLEELGISFEDCRGQSYDNGANMKGKNKGVQARLLEKNPRALF 463

HSP 2 Score: 28.8758 bits (63), Expect = 8.823e-14
Identity = 9/27 (33.33%), Postives = 17/27 (62.96%), Query Frame = 2 
Query:  539 LSCISFFGTVESIFTFCSASTSRWQMF 619
            +  +S+FG ++ ++T  SAS  RW + 
Sbjct:  483 VDAMSYFGVLQKLYTLFSASAQRWAIL 509

HSP 3 Score: 28.1054 bits (61), Expect = 8.823e-14
Identity = 8/24 (33.33%), Postives = 21/24 (87.50%), Query Frame = 1 
Query:   16 TNKGNFLELLKLLSKYDVVLKEHI 87
            ++ GNFL+ ++L++++D ++K+H+
Sbjct:  298 SSNGNFLKEVELMARFDPIMKDHL 321
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Medaka
Match: ENSORLT00000045044.1 (zinc finger MYM-type protein 1-like [Source:NCBI gene;Acc:111948193])

HSP 1 Score: 57.3806 bits (137), Expect = 8.823e-14
Identity = 43/114 (37.72%), Postives = 65/114 (57.02%), Query Frame = 3 
Query:  150 SKLVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKIDK*KVEVIEVFLGFLPLKRKS---R*SK**NS*KA*KDGLNIIMYRSQRYDNVALMSGVHVGVQAIIKAKNKKRSF 482
            S +V++IK AKYF I+ D T DISH +Q+S ++R V + + K ++ E F+GFL  +  +     S   N  +  + G++    R Q YDN A M G + GVQA +  KN +  F
Sbjct:  353 SAIVDDIKKAKYFSIILDCTLDISHTEQLSVIIRVVSLME-KPQIREHFMGFLEAEESTGQHLASMILN--RLEELGISFEDCRGQSYDNGANMKGKNKGVQARLLEKNPRALF 463

HSP 2 Score: 28.8758 bits (63), Expect = 8.823e-14
Identity = 9/27 (33.33%), Postives = 17/27 (62.96%), Query Frame = 2 
Query:  539 LSCISFFGTVESIFTFCSASTSRWQMF 619
            +  +S+FG ++ ++T  SAS  RW + 
Sbjct:  483 VDAMSYFGVLQKLYTLFSASAQRWAIL 509

HSP 3 Score: 28.1054 bits (61), Expect = 8.823e-14
Identity = 8/24 (33.33%), Postives = 21/24 (87.50%), Query Frame = 1 
Query:   16 TNKGNFLELLKLLSKYDVVLKEHI 87
            ++ GNFL+ ++L++++D ++K+H+
Sbjct:  298 SSNGNFLKEVELMARFDPIMKDHL 321
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. Planmine SMEST
Match: SMESG000049700.1 (SMESG000049700.1)

HSP 1 Score: 65.855 bits (159), Expect = 8.639e-18
Identity = 51/148 (34.46%), Postives = 74/148 (50.00%), Query Frame = 3 
Query:   84 YFDLENDKSSKVSYMPLDIEN----------KSKLVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKID--K*KVEVIEVFLGFLPLKRKSR*SK---**NS*KA*KDGLNIIMYRSQRYDNVALMSGVHVGVQAIIKAKNKKRSF 482
            + D        VSY+    +N          ++KL+N+IK  KY+G  FDSTPD +H + +S V R+V +D     V + E FL F+ L  K   +      ++ +A  D L +   RSQ YDN ALMSG   G+Q  I  +N +  F
Sbjct:  213 HLDHARQNPGSVSYLSPQTQNEFMGLLASKVRNKLLNDIKRNKYYGSFFDSTPDQAHREHLSRVKRYVDVDFSNKTVTIKESFLRFIELHAKDAATLEYVIVDTLEA--DNLRLDDCRSQCYDNAALMSGHISGLQQRICNRNPRAIF 358

HSP 2 Score: 31.9574 bits (71), Expect = 8.639e-18
Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = 2 
Query:  545 CISFFGTVESIFTFCSASTSRWQ 613
             ++FFGT+ESI+ + S ST RW 
Sbjct:  380 AVTFFGTIESIYLYFSRSTLRWN 402

HSP 3 Score: 29.261 bits (64), Expect = 8.639e-18
Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = 1 
Query:   16 TNKGNFLELLKLLSKYDVVLKEHI 87
            +N GNFL  LKLL++YD +L  H+
Sbjct:  191 SNVGNFLATLKLLAEYDPLLFNHL 214
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. Planmine SMEST
Match: SMESG000036749.1 (SMESG000036749.1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.187e-16
Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = 3 
Query:  156 LVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKIDK*KVEVIEVFLGFLPLKRKSR*SK**NS*KA*KD---------GLNIIMYRSQRYDNVALMSGVHVGVQAII 455
            ++  IK AKYF ++ D TPD  HV+QI+ V+R+V I   +VEV E F+GF   K+ +         ++  D          LNI   R Q YDN + MSG H G+Q  I
Sbjct:  267 ILTSIKEAKYFSVILDCTPDTGHVEQITMVIRYVHIKNYEVEVRENFIGFYQAKKCTG--------ESFYDFLIQKLNYIELNISDMRGQGYDNGSNMSGKHRGLQKRI 367

HSP 2 Score: 29.6462 bits (65), Expect = 1.187e-16
Identity = 13/30 (43.33%), Postives = 17/30 (56.67%), Query Frame = 2 
Query:  539 LSCISFFGTVESIFTFCSASTSRWQMFIKH 628
             S + FF  V +I  F SAS  RWQ+  K+
Sbjct:  396 FSTVDFFSNVSAISNFFSASPFRWQVLKKN 425

HSP 3 Score: 26.9498 bits (58), Expect = 1.187e-16
Identity = 9/23 (39.13%), Postives = 18/23 (78.26%), Query Frame = 1 
Query:   19 NKGNFLELLKLLSKYDVVLKEHI 87
            N GNFL+ ++++ K+D ++ +HI
Sbjct:  208 NNGNFLKAIEMIGKFDDIMADHI 230
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. Planmine SMEST
Match: SMESG000069312.1 (SMESG000069312.1)

HSP 1 Score: 62.7734 bits (151), Expect = 3.209e-16
Identity = 52/147 (35.37%), Postives = 75/147 (51.02%), Query Frame = 3 
Query:   84 YFDLENDKSSKVSYMPLDIENKS----------KLVNEIKLAKYFGIMFDSTPDISHVDQISEV-VRFVKI--DK*KVEVIEVFLGFLPLKRKSR*S-K**NS*KA*KDGLNIIMYRSQRYDNVALMSGVHVGVQAIIKAKNKKRSF 482
            + D        VSY+    +N+S          KL+N+IK  KY+GI+FDSTPD +H + +S V +R+V +      V + E FLGF+ L  K   + +   +     D L +   RSQ YDN ALMSG   G+Q  I  +N +  F
Sbjct:  322 HIDHARQNPGSVSYLSPQTQNESISLLASKVRNKLLNDIKRNKYYGILFDSTPDQAHRELLSRVSMRYVNVYFSNKTVTIKESFLGFIELHAKDAATLEHVIADTLEADNLRLDDCRSQCYDNAALMSGHISGLQQRICNRNPRAIF 468

HSP 2 Score: 31.5722 bits (70), Expect = 3.209e-16
Identity = 14/24 (58.33%), Postives = 18/24 (75.00%), Query Frame = 1 
Query:   16 TNKGNFLELLKLLSKYDVVLKEHI 87
            +N GNFL  LKLL++YD +L  HI
Sbjct:  300 SNVGNFLATLKLLAEYDPLLSNHI 323

HSP 3 Score: 27.7202 bits (60), Expect = 3.209e-16
Identity = 10/21 (47.62%), Postives = 16/21 (76.19%), Query Frame = 2 
Query:  548 ISFFGTVESIFTFCSASTSRW 610
            ++FF T++SI+ + S ST RW
Sbjct:  491 VTFFRTIKSIYLYFSRSTLRW 511
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. Planmine SMEST
Match: SMESG000047784.1 (SMESG000047784.1)

HSP 1 Score: 72.7886 bits (177), Expect = 5.287e-15
Identity = 50/148 (33.78%), Postives = 81/148 (54.73%), Query Frame = 3 
Query:   78 RTYFDLENDKSSKVSYMPLDIEN----------KSKLVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKID--K*KVEVIEVFLGFLPLKRK-SR*SK**NS*KA*KDGLNIIMYRSQRYDNVALMSGVHVGVQAIIKAKNKKRSF 482
             ++ +L  +    VSY+ L+I+N          ++KL+ +IKL  Y+GI+ DST D+ + +Q+S+V+RFV ID     + + E FLGF+ +  K +   +     K   D +     RSQ YDN A+M+G   G+Q  I A+N +  F
Sbjct:  158 ESHLNLTRESPGSVSYLSLEIQNEFISLLASNVRNKLLKDIKLNNYYGILLDSTRDLGYREQLSKVIRFVNIDFENKTINIKESFLGFIEIHAKDAAILETVIVEKLQSDNIPFDDCRSQCYDNAAVMTGHISGLQQRICARNHQTLF 305
[Close]
BLAST of Zinc finger MYM-type protein 1 vs. Planmine SMEST
Match: SMESG000074559.1 (SMESG000074559.1)

HSP 1 Score: 72.7886 bits (177), Expect = 5.989e-15
Identity = 50/148 (33.78%), Postives = 80/148 (54.05%), Query Frame = 3 
Query:   78 RTYFDLENDKSSKVSYMPLDIEN----------KSKLVNEIKLAKYFGIMFDSTPDISHVDQISEVVRFVKID--K*KVEVIEVFLGFLPLKRKSR*S-K**NS*KA*KDGLNIIMYRSQRYDNVALMSGVHVGVQAIIKAKNKKRSF 482
             ++ +L  +    VSY+ L+IEN          ++KL+ +IKL  Y+GI+ DST D+ + +Q+S+V+RFV ID     + + E FLGF+ +  K   + +     K   D + +    SQ YDN A+M+G   G+Q  I A+N    F
Sbjct:  180 ESHLNLTRESPGSVSYLSLEIENEFISLLASNVRNKLLKDIKLNNYYGILLDSTRDLGYPEQLSKVIRFVNIDFENKTINIKESFLGFIEIHAKDAATLETVIVEKLQSDNIPLDDCTSQCYDNAAVMTGHISGLQQRICARNHHSLF 327
The following BLAST results are available for this feature:
BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
CR762475.11.199e-1736.72pep chromosome:GRCz11:4:55494751:55498830:1 gene:E... [more]
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BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ENSXETT00000043220.11.559e-1639.09pep primary_assembly:Xenopus_tropicalis_v9.1:7:364... [more]
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BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger MYM-type protein 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger MYM-type protein 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A212FKU03.257e-3160.34Putative zinc finger MYM domain containing 1 OS=Da... [more]
A0A0B7BQI53.296e-3060.18DUF4371 domain-containing protein OS=Arion vulgari... [more]
A0A1B6DAI52.314e-2842.07Uncharacterized protein OS=Clastoptera arizonana O... [more]
A0A087UAK31.263e-2639.86Zinc finger MYM-type protein 1 (Fragment) OS=Stego... [more]
A0A4C1SXH18.359e-2659.05DUF4371 domain-containing protein OS=Eumeta varieg... [more]
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BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSAMXT00000035531.13.438e-2041.67pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ENSAMXT00000042715.16.923e-2041.67pep primary_assembly:Astyanax_mexicanus-2.0:16:118... [more]
ENSAMXT00000044961.12.285e-1432.26pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ENSAMXT00000042930.14.064e-1331.47pep primary_assembly:Astyanax_mexicanus-2.0:12:254... [more]
ENSAMXT00000036272.14.380e-1329.61pep primary_assembly:Astyanax_mexicanus-2.0:20:119... [more]
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BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger MYM-type protein 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ENSORLT00000028133.18.823e-1437.72zinc finger MYM-type protein 1-like [Source:NCBI g... [more]
ENSORLT00000042294.18.823e-1437.72zinc finger MYM-type protein 1-like [Source:NCBI g... [more]
ENSORLT00000045044.18.823e-1437.72zinc finger MYM-type protein 1-like [Source:NCBI g... [more]
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BLAST of Zinc finger MYM-type protein 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000049700.18.639e-1834.46SMESG000049700.1[more]
SMESG000036749.11.187e-1638.53SMESG000036749.1[more]
SMESG000069312.13.209e-1635.37SMESG000069312.1[more]
SMESG000047784.15.287e-1533.78SMESG000047784.1[more]
SMESG000074559.15.989e-1533.78SMESG000074559.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30016372 ID=SMED30016372|Name=Zinc finger MYM-type protein 1|organism=Schmidtea mediterranea sexual|type=transcript|length=628bp
GAAAGAGAAGGCCTAACAAATAAAGGCAACTTCTTAGAACTTCTCAAACT
GCTTTCAAAGTACGATGTGGTGCTGAAAGAACATATTTTGATTTGGAGAA
TGATAAATCATCAAAAGTATCATACATGCCGCTAGATATAGAAAATAAAT
CTAAACTTGTCAACGAAATTAAATTGGCAAAATATTTTGGTATCATGTTT
GATAGCACACCCGATATTTCACATGTTGATCAAATATCTGAAGTGGTTCG
ATTTGTGAAAATTGATAAATGAAAAGTCGAAGTCATAGAAGTATTCCTTG
GATTTTTACCCTTAAAAAGAAAGAGCCGATGATCTAAGTGATGAAATTCT
TAAAAAGCTTGAAAGGATGGTTTAAATATTATAATGTATCGTTCTCAACG
TTATGATAATGTAGCTCTTATGAGCGGCGTACATGTAGGAGTACAAGCCA
TTATTAAAGCAAAAAACAAAAAAAGAAGTTTTTGTTGCATGTATTGATCA
TTCAATTAATTTAGGTAGCCAACCCTCATTTGCACAAATTATCTTGTATA
TCATTTTTTGGAACAGTAGAGTCAATTTTTACATTTTGCTCTGCTTCCAC
TAGCCGCTGGCAAATGTTTATAAAACAC
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002111X2 cell
Vocabulary: molecular function
TermDefinition
GO:0003676nucleic acid binding
GO:0046983protein dimerization activity