Thyroglobulin
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30016345 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 7
Homology
BLAST of Thyroglobulin vs. Ensembl Human
Match: TG (thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]) HSP 1 Score: 57.7658 bits (138), Expect = 5.185e-9 Identity = 35/111 (31.53%), Postives = 49/111 (44.14%), Query Frame = 2 Query: 251 KARKGGLLGAP-------IPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFS--------------CTTNGSYSSVQCNG 520 +AR L+G+ +P C S G FLPVQC S+CYCVD EG I + I + C + FL + + + C+T+G + VQCNG Sbjct: 666 RARMQSLMGSQPAGSTLFVPACTSEGHFLPVQCFNSECYCVDAEGQAIPGTRSAIGKPKKCPTPCQLQSEQAFLRTVQALLSNSSMLPTLSDTYIPQCSTDGQWRQVQCNG 776 HSP 2 Score: 48.521 bits (114), Expect = 5.851e-6 Identity = 27/99 (27.27%), Postives = 45/99 (45.45%), Query Frame = 2 Query: 284 IPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINE-FANMDCKCAREQNDYFL----TGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAG 565 +P C + G + VQC +C+CV+ G + + DC+ R + + G + +CT+ G + VQC S C+C D G+A+ G Sbjct: 617 VPSCTTEGSYEDVQCFSGECWCVNSWGKELPGSRVRGGQPRCPTDCEKQRARMQSLMGSQPAGSTLFVPACTSEGHFLPVQCFNSECYCVDAEGQAIPG 715
BLAST of Thyroglobulin vs. Ensembl Zebrafish
Match: nid2a (nidogen 2a (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-030827-2]) HSP 1 Score: 51.9878 bits (123), Expect = 1.695e-7 Identity = 38/115 (33.04%), Postives = 54/115 (46.96%), Query Frame = 2 Query: 269 LLGAPIPKCDSNGDFLPVQCTGS--KCYCVD-----REGNNIRNYAAHINEFANMDCKCAREQN-DYFLTG-----LIGKMFS-CTTNGSYSSVQCNGSV--CFCADYNGKAVAG 565 ++GA IP+CD G + P QC GS C+CVD R G + +N + K EQ+ D +G ++G C G Y + QC+GS C+C D G+ AG Sbjct: 54 VVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDNRGQERAGTRTPPGSPRVNCDQPVRPKTQCEQHRDSLQSGNDGVPVVGAFIPQCDEEGQYRTQQCHGSTGHCWCVDNRGQERAG 168 HSP 2 Score: 48.1358 bits (113), Expect = 3.120e-6 Identity = 37/134 (27.61%), Postives = 57/134 (42.54%), Query Frame = 2 Query: 224 NTQCFNKLNKARKG----GLLGAPIPKCDSNGDFLPVQCTGS--KCYCVD-----REGNNIRNYAAHIN--EFANMDCKCAREQN-----DYFLTGLIGKMFSCTTNGSYSSVQCNGSV--CFCADYNGKAVAG 565 TQC + + G ++GA IP+CD G + QC GS C+CVD R G + +N + +C + ++ D + + + C G Y QC+GS C+C D G+ AG Sbjct: 111 KTQCEQHRDSLQSGNDGVPVVGAFIPQCDEEGQYRTQQCHGSTGHCWCVDNRGQERAGTRTPPGSPRVNCDQPVRPKTQCEQHRDSLQSGDGGVPAVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDSRGQERAG 244
BLAST of Thyroglobulin vs. Ensembl Zebrafish
Match: nid2a (nidogen 2a (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-030827-2]) HSP 1 Score: 49.2914 bits (116), Expect = 1.010e-6 Identity = 42/136 (30.88%), Postives = 57/136 (41.91%), Query Frame = 2 Query: 269 LLGAPIPKCDSNGDFLPVQCTGS--KCYCVDREGNN-----------IRNYAAHINEFANMDCKCARE--QNDYFLTGLIGKMFS-CTTNGSYSSVQCNGSV--CFCADYNGKAVA------GKPIVNIGQIQSLR 604 +GA IP+CD G + P+QC GS C+CVD G RN + C+ R+ Q++ ++G C G Y QC+GS C+C D G+ A G P VN Q LR Sbjct: 70 AVGAFIPQCDEEGQYRPLQCHGSTGHCWCVDNRGQERAGTRTPPGSPPRNCDEPVR--PKTHCEQHRDSLQSENGGVPVVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDNRGQERAGTRTPPGSPRVNCDQPVHLR 203
BLAST of Thyroglobulin vs. Ensembl Zebrafish
Match: nid2a (nidogen 2a (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-030827-2]) HSP 1 Score: 49.6766 bits (117), Expect = 1.618e-6 Identity = 38/115 (33.04%), Postives = 53/115 (46.09%), Query Frame = 2 Query: 269 LLGAPIPKCDSNGDFLPVQCTGSK--CYCVD-----REGNNIRNYAAHINEFANMDCKCAREQN-DYFLTG-----LIGKMF-SCTTNGSYSSVQCNGSV--CFCADYNGKAVAG 565 ++GA IP+CD G + P QC GS C+CVD R G + +N + K EQ+ D +G ++G C G Y QC+GS C+C D G+ AG Sbjct: 1083 VVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDSRGQERAGTRTPPGSPRVNCDQPVRSKTHCEQHRDSLQSGDGGVPVVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDNRGQERAG 1197 HSP 2 Score: 49.2914 bits (116), Expect = 2.374e-6 Identity = 38/124 (30.65%), Postives = 57/124 (45.97%), Query Frame = 2 Query: 251 KARKGGL--LGAPIPKCDSNGDFLPVQCTGSK--CYCVD-----REGNNIRNYAAHIN--EFANMDCKCAREQNDYFLTG-----LIGKMF-SCTTNGSYSSVQCNGSV--CFCADYNGKAVAG 565 ++ GG+ +GA IP+CD G + P QC GS C+CVD R G + +N + ++ +C + D +G +G C G Y QC+GS C+C D G+ AG Sbjct: 923 QSENGGVPVVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDNRGQERAGTRTPPGSPRVNCDQPVHLRTRC-EQHRDSLQSGDGGVPAVGAFIPQCDEEGQYRPQQCHGSTGHCWCVDNRGQERAG 1045
BLAST of Thyroglobulin vs. Ensembl Zebrafish
Match: tg (thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1]) HSP 1 Score: 48.9062 bits (115), Expect = 2.990e-6 Identity = 28/95 (29.47%), Postives = 43/95 (45.26%), Query Frame = 2 Query: 284 IPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFS------CTTNGSYSSVQCNGSVCFCADYNG 550 +P+C +G + VQC GS+C+CVD G + + +C +E+ S C T+G+Y + QC G CFC D +G Sbjct: 606 LPQCTEDGLYQDVQCQGSECWCVDSRGLEVPG-SRTTGSRPRCPSQCEKERQMAIAVKASSSAGSEVFIPKCETDGAYVARQCLGKSCFCVDRSG 699
BLAST of Thyroglobulin vs. Ensembl Zebrafish
Match: spock1 (SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]) HSP 1 Score: 48.521 bits (114), Expect = 3.062e-6 Identity = 32/107 (29.91%), Postives = 57/107 (53.27%), Query Frame = 2 Query: 80 IIMNKTILSLITIMNLLL-INKVYGTCQDSSD--CNNDLICIGNECSENPLNTQCFNKLNK----ARKGGLLGAPIPKCDSNGDFLPVQCTGS--KCYCVDREGNNI 373 ++++++ LS I + L + ++ +C D +N+ C C + P C N++NK +R+ LLG +P+C +G F QC GS +C+CVD+ GN + Sbjct: 276 LLLDQSELSAIYLDKYELCMRPLFNSCDSFKDGKLSNNEWCY---CFQKPDGMPCQNEMNKIHSQSRRKTLLGVYVPRCTEDGYFKATQCHGSTGQCWCVDKYGNEL 379
BLAST of Thyroglobulin vs. Ensembl Xenopus
Match: nid2 (nidogen 2 [Source:NCBI gene;Acc:100036716]) HSP 1 Score: 59.3066 bits (142), Expect = 1.312e-9 Identity = 52/188 (27.66%), Postives = 79/188 (42.02%), Query Frame = 2 Query: 164 SSDCNNDLICIGNECSE----NPLNTQCFNKLNKARKGG---LLGAPIPKCDSNGDFLPVQCTGSK--CYCVDREGNNIR-----------NYAAHINEFANMDCKCAREQNDYFLTGLIGKMF-------------SCTTNGSYSSVQCNGSV--CFCADYNGKAVA------GKPIVNIGQIQSLR 604 S CN+ G +C++ PL T C K + G +G +P+CD G+++P+QC GS C+CVD+ G I N E C R+Q L+G++ C G+Y S+QC+GS C+C D G+ +A G+P N G+ + R Sbjct: 901 SCRCNSGYEGDGFQCTQILGPEPLKTPCLEKRQQLHPRGPRPAVGQFVPECDVEGNYVPLQCHGSTGHCWCVDKLGEEITGTRTPPGRPAPNCGETGPEPLKTPCLERRQQ-------LLGQLHPRGPRPAVGQFVPECDAEGNYVSLQCHGSTGHCWCVDKLGEEIAGTRTPPGRPGPNCGETEPTR 1081
BLAST of Thyroglobulin vs. Ensembl Xenopus
Match: amd1 (adenosylmethionine decarboxylase 1 [Source:Xenbase;Acc:XB-GENE-484611]) HSP 1 Score: 58.5362 bits (140), Expect = 2.960e-9 Identity = 34/113 (30.09%), Postives = 53/113 (46.90%), Query Frame = 2 Query: 284 IPKCDSNGDFLPVQCTGSKCYCVDREGNNI---RNYAAHINEFANMDCKCAREQ------NDYFLTGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAGKPIVNIGQIQ 595 IP C +G + +QC+ ++C+CVD +G I R H KC +E+ + G + +C G + +VQC G +CFC D G+ + G V+ G IQ Sbjct: 617 IPACKEDGRYNDIQCSKAECWCVDDQGREIDRTRTQGTH----PRCPTKCEKERYRQTAVRESLPPGAELFIPACDLEGHFLTVQCTGKLCFCVDLEGRIIPGTQKVSGGDIQ 725 HSP 2 Score: 50.8322 bits (120), Expect = 1.136e-6 Identity = 39/113 (34.51%), Postives = 50/113 (44.25%), Query Frame = 2 Query: 284 IPKCDSNGDFLPVQC-TGSKCYCVDREGNNIR-NYAAHINEFANM-DCKCAREQNDYFL----TGLIGKMFSCTTNGSYSSVQCNGSVC--FCADYNGKAVAGKPIVNIGQIQ 595 +P CD NGDF P+QC TG +C+CVD +G I ++ NM DC R Q L TG GK T Q N C + D GK+ PI+ + Q Sbjct: 323 VPSCDDNGDFNPIQCQTGQQCWCVDSKGREIHGTRRLGVSPSCNMDDCPTKRRQALSSLFHGPTGHFGKHSLFVTQEEELGSQINAKFCSSYLTDLFGKSGLLFPIIQKVRFQ 435
BLAST of Thyroglobulin vs. Ensembl Xenopus
Match: nid2 (nidogen 2 [Source:NCBI gene;Acc:100036716]) HSP 1 Score: 56.6102 bits (135), Expect = 1.309e-8 Identity = 48/172 (27.91%), Postives = 75/172 (43.60%), Query Frame = 2 Query: 164 SSDCNNDLICIGNECSE----NPLNTQCFNKLNKARKGG---LLGAPIPKCDSNGDFLPVQCTGSK--CYCVDREGNNIRNY-------AAHINEFANMDCK--CAREQNDYFLTG---LIGKMF-SCTTNGSYSSVQCNGSV--CFCADYNGKAVA------GKPIVNIGQ 589 S CN+ G +C++ PL T C K + G +G +P+CD G+++P+QC GS C+CVD+ G I A + E K C ++ G +G+ C G+Y +QC+GS C+C D G+ + G+P N G+ Sbjct: 901 SCRCNSGYEGDGFQCTQILGPEPLKTPCLEKRQQLHPRGPRPAVGQFVPECDVEGNYVPLQCHGSTGHCWCVDKLGEEITGTRTPPGRPAPNCGERGPEPLKTPCLEKRQQLHPRGPRPAVGQFVPECDVEGNYVPLQCHGSTGHCWCVDKLGEEITGTRTPPGRPAPNCGE 1072
BLAST of Thyroglobulin vs. Ensembl Xenopus
Match: nid2 (nidogen 2 [Source:NCBI gene;Acc:100036716]) HSP 1 Score: 54.299 bits (129), Expect = 6.016e-8 Identity = 45/156 (28.85%), Postives = 71/156 (45.51%), Query Frame = 2 Query: 164 SSDCNNDLICIGNECSENPLNTQCFNKLNKARKGG---LLGAPIPKCDSNGDFLPVQCTGSK--CYCVDREGNNIRNY-------AAHINEFANMDCK---CAREQN---DYFLTGLIGKMF--SCTTNGSYSSVQCNGS--VCFCADYNGKAVAG 565 S CN+ G +C E PL T C K + G +G +P+CD G+++P+QC GS C+CVD+ G I A + E K C R + +++ G+ + C G +S +QC+G+ C+C D G+ + G Sbjct: 872 SCRCNSGYEGDGFQCPE-PLKTPCLEKRQQLHPRGPRPAVGQFVPECDVEGNYVPLQCHGSTGHCWCVDKLGEEITGTRTPPGRPAPNCGERGPEPLKTPLCERWKQSLIEHYGGKPGGEHYVPQCDQYGDFSPLQCHGNSGYCWCVDKEGREIEG 1026
BLAST of Thyroglobulin vs. Ensembl Xenopus
Match: nid2 (nidogen 2 [Source:NCBI gene;Acc:100036716]) HSP 1 Score: 52.7582 bits (125), Expect = 1.986e-7 Identity = 44/160 (27.50%), Postives = 72/160 (45.00%), Query Frame = 2 Query: 164 SSDCNNDLICIGNECSE----NPLNTQCFNKLNKARKGG---LLGAPIPKCDSNGDFLPVQCTGSK--CYCVDREGNNIRNY-------AAHINEFANMDCK---CAREQN---DYFLTGLIGKMF--SCTTNGSYSSVQCNGS--VCFCADYNGKAVAG 565 S CN+ G +C++ PL T C K + G +G +P+CD G+++P+QC GS C+CVD+ G I A + E K C R + +++ G+ + C G +S +QC+G+ C+C D G+ + G Sbjct: 859 SCRCNSGYEGDGFQCTQILGPEPLKTPCLEKRQQLHPRGPRPAVGQFVPECDVEGNYVPLQCHGSTGHCWCVDKLGEEITGTRTPPGRPAPNCGERGPEPLKTPLCERWKQSLIEHYGGKPGGEHYVPQCDQYGDFSPLQCHGNSGYCWCVDKEGREIEG 1018
BLAST of Thyroglobulin vs. Ensembl Mouse
Match: Tg (thyroglobulin [Source:MGI Symbol;Acc:MGI:98733]) HSP 1 Score: 55.8398 bits (133), Expect = 1.790e-8 Identity = 31/94 (32.98%), Postives = 43/94 (45.74%), Query Frame = 2 Query: 284 IPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFS---------------CTTNGSYSSVQCNG 520 +P C G FLPVQC S+CYCVD EG I + + E C + FL G++G + S C+ +G + VQC+G Sbjct: 684 VPTCTREGYFLPVQCFNSECYCVDTEGQVIPGTQSTVGEAKQCPSVCQLQAEQAFL-GVVGVLLSNSSMVPSISNVYIPQCSASGQWRHVQCDG 776
BLAST of Thyroglobulin vs. UniProt/SwissProt
Match: sp|P01267|THYG_BOVIN (Thyroglobulin OS=Bos taurus OX=9913 GN=TG PE=1 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 7.273e-9 Identity = 39/120 (32.50%), Postives = 55/120 (45.83%), Query Frame = 2 Query: 227 TQCFNKLNKARKGGLLGAP-------IPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFS---------------CTTNGSYSSVQCNG 520 T+C + +AR LLG+ +P C S G+FLPVQC S+CYCVD EG I + + E C + FL G + + S C+ +G +S VQC+G Sbjct: 659 TEC--EKQRARMQSLLGSQPAGSSLFVPACTSKGNFLPVQCFNSECYCVDTEGQPIPGTRSALGEPKKCPSPCQLQAERAFL-GTVRTLVSNPSTLPALSSIYIPQCSASGQWSPVQCDG 775 HSP 2 Score: 53.1434 bits (126), Expect = 1.076e-6 Identity = 30/102 (29.41%), Postives = 46/102 (45.10%), Query Frame = 2 Query: 284 IPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGK------MF--SCTTNGSYSSVQCNGSVCFCADYNGKAVAG 565 +P C + G + VQC C+CVD +G R A C E+ + L+G +F +CT+ G++ VQC S C+C D G+ + G Sbjct: 616 VPACTAEGSYEEVQCFAGDCWCVDAQG---RELAGSRVRGGRPRCPTECEKQRARMQSLLGSQPAGSSLFVPACTSKGNFLPVQCFNSECYCVDTEGQPIPG 714
BLAST of Thyroglobulin vs. UniProt/SwissProt
Match: sp|P01266|THYG_HUMAN (Thyroglobulin OS=Homo sapiens OX=9606 GN=TG PE=1 SV=5) HSP 1 Score: 57.7658 bits (138), Expect = 2.490e-8 Identity = 35/111 (31.53%), Postives = 49/111 (44.14%), Query Frame = 2 Query: 251 KARKGGLLGAP-------IPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFS--------------CTTNGSYSSVQCNG 520 +AR L+G+ +P C S G FLPVQC S+CYCVD EG I + I + C + FL + + + C+T+G + VQCNG Sbjct: 666 RARMQSLMGSQPAGSTLFVPACTSEGHFLPVQCFNSECYCVDAEGQAIPGTRSAIGKPKKCPTPCQLQSEQAFLRTVQALLSNSSMLPTLSDTYIPQCSTDGQWRQVQCNG 776
BLAST of Thyroglobulin vs. UniProt/SwissProt
Match: sp|P06882|THYG_RAT (Thyroglobulin OS=Rattus norvegicus OX=10116 GN=Tg PE=1 SV=4) HSP 1 Score: 57.7658 bits (138), Expect = 2.731e-8 Identity = 34/94 (36.17%), Postives = 45/94 (47.87%), Query Frame = 2 Query: 284 IPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFS---------------CTTNGSYSSVQCNG 520 +P C S G FLPVQC S+CYCVD EG I + I E C + FL G++G + S C+T+G + VQC+G Sbjct: 684 VPTCTSEGYFLPVQCFNSECYCVDAEGQVIPGTQSTIGEPKLCPSVCQLQAEQAFL-GVVGVLLSNSSMVPPISSVYIPQCSTSGQWMPVQCDG 776
BLAST of Thyroglobulin vs. UniProt/SwissProt
Match: sp|F1RRV3|THYG_PIG (Thyroglobulin OS=Sus scrofa OX=9823 GN=TG PE=1 SV=5) HSP 1 Score: 56.225 bits (134), Expect = 9.308e-8 Identity = 31/102 (30.39%), Postives = 46/102 (45.10%), Query Frame = 2 Query: 284 IPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGK--------MFSCTTNGSYSSVQCNGSVCFCADYNGKAVAG 565 +P C + G + VQC +C+CVD G R A C A E+ + L+G+ + SCT G + VQC S C+C D +G+ + G Sbjct: 618 VPSCTAEGSYEDVQCFAGECWCVDARG---RELAGSRARGGRPRCPTACEKQRERMQSLLGRQPAGSSVFVPSCTREGHFLPVQCFSSDCYCVDADGQPIPG 716 HSP 2 Score: 50.447 bits (119), Expect = 6.464e-6 Identity = 30/93 (32.26%), Postives = 38/93 (40.86%), Query Frame = 2 Query: 284 IPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFL---TGLIGK-----------MFSCTTNGSYSSVQCNG 520 +P C G FLPVQC S CYCVD +G I E C + FL GLI + C+ +G + VQC+G Sbjct: 685 VPSCTREGHFLPVQCFSSDCYCVDADGQPIPGTRTAPGEPKQCPTPCQLQAEQAFLGTVRGLISNPSEPPVLSSIYIPQCSASGQWRRVQCDG 777
BLAST of Thyroglobulin vs. UniProt/SwissProt
Match: sp|O08710|THYG_MOUSE (Thyroglobulin OS=Mus musculus OX=10090 GN=Tg PE=1 SV=3) HSP 1 Score: 55.8398 bits (133), Expect = 1.252e-7 Identity = 31/94 (32.98%), Postives = 43/94 (45.74%), Query Frame = 2 Query: 284 IPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFS---------------CTTNGSYSSVQCNG 520 +P C G FLPVQC S+CYCVD EG I + + E C + FL G++G + S C+ +G + VQC+G Sbjct: 684 VPTCTREGYFLPVQCFNSECYCVDTEGQVIPGTQSTVGEAKQCPSVCQLQAEQAFL-GVVGVLLSNSSMVPSISNVYIPQCSASGQWRHVQCDG 776
BLAST of Thyroglobulin vs. TrEMBL
Match: A0A194AKI3 (Uncharacterized protein OS=Pinctada fucata OX=50426 PE=4 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.568e-33 Identity = 63/130 (48.46%), Postives = 80/130 (61.54%), Query Frame = 2 Query: 224 NTQCFNKLNKARKG-GLLGAPIPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAGKPIVNIGQIQSLRCN 610 + C L KA+ G LLGAP P CD G + P QC GS+CYCV + G I Y A++ E M C+CAR+Q +Y +GLIGK F CT++GSY + QC G VCFCAD NG + P V+I Q+ L C Sbjct: 108 DAPCAAALLKAQNGPSLLGAPTPSCDGEGYYQPKQCQGSQCYCVSKNGKEISGYTANVWEAQQMTCQCARDQAEYMASGLIGKFFYCTSDGSYQTYQCQGDVCFCADTNGVKMDHSPSVHISQVTKLNCK 237
BLAST of Thyroglobulin vs. TrEMBL
Match: A0A1S3J5E7 (equistatin-like OS=Lingula unguis OX=7574 GN=LOC106170269 PE=4 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.156e-27 Identity = 49/126 (38.89%), Postives = 79/126 (62.70%), Query Frame = 2 Query: 236 FNKLNKARKGG--LLGAPIPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAGKPIVNIGQIQSLRC 607 ++ ++R+ G LLGA P CD++G + QC + C+CV+++G+ + +Y+A E +M C CAR++++Y GLIGKM+ C NG+Y QC GSVC+C D G + P V+I +++L C Sbjct: 7 LARIEESRRQGQPLLGATPPTCDADGTYSAKQCKEASCFCVNKDGDRLGDYSARFWEAKDMTCNCARDEDEYQKKGLIGKMYICKENGNYEKYQCTGSVCYCVDEKGSKLESTPPVSISAVKTLNC 132
BLAST of Thyroglobulin vs. TrEMBL
Match: A0A210PVS8 (Testican-3 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT04456 PE=4 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.685e-26 Identity = 58/114 (50.88%), Postives = 73/114 (64.04%), Query Frame = 2 Query: 266 GLLGAPIPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAGKPIVNIGQIQSLRC 607 GLLGA P CD NG + P QC GS C CV + G +I NY A I + +M+C+CAR+Q +Y TGLIG+ F CT NG+Y + QC GSVC C D G+ V G V+IG + L C Sbjct: 125 GLLGAVEPLCDENGFYQPKQCEGSVCSCVSKTGRDILNYRADIWQSEDMNCQCARDQQEYMDTGLIGRFFYCTPNGNYQNHQCLGSVCHCIDNRGQMV-GTQTVSIGDLAKLSC 237
BLAST of Thyroglobulin vs. TrEMBL
Match: A0A1S3IF36 (uncharacterized protein LOC106163748 OS=Lingula unguis OX=7574 GN=LOC106163748 PE=4 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.477e-26 Identity = 49/126 (38.89%), Postives = 79/126 (62.70%), Query Frame = 2 Query: 236 FNKLNKARKGG--LLGAPIPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAGKPIVNIGQIQSLRC 607 ++ ++R+ G LLGA P CD++G + QC + C+CV+++G+ + +Y+A E +M C CAR++++Y GLIGKM+ C NG+Y QC GSVC+C D G + P V+I +++L C Sbjct: 105 LARIEESRRQGQPLLGATPPTCDADGTYSAKQCIEASCFCVNKDGDRLGDYSARFWEAKDMTCNCARDEDEYQKKGLIGKMYICNENGNYEKYQCTGSVCYCVDEKGSKLESTPPVSISAVKTLNC 230
BLAST of Thyroglobulin vs. TrEMBL
Match: V4AXA0 (Uncharacterized protein OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_238761 PE=4 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.659e-25 Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = 2 Query: 245 LNKARKGG-LLGAPIPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAGKPIVNIGQIQSLRC 607 L++ + GG LLGA PKCDS+G + VQC GS+C+C G N+ Y + MDCKCAR+Q+ Y TGLIGK+F C NG+Y + QC GSVC+C D NGK V +NIG + +L C Sbjct: 112 LDQKQNGGILLGAEEPKCDSDGTYSAVQCIGSQCHCTSAGGKNL-GYPVNRGLTQGMDCKCARDQDTYAKTGLIGKLFYCGPNGNYRNYQCVGSVCWCKDSNGKQVGQS--INIGLLSTLHC 230
BLAST of Thyroglobulin vs. Ensembl Cavefish
Match: tg (thyroglobulin [Source:NCBI gene;Acc:103037495]) HSP 1 Score: 51.9878 bits (123), Expect = 2.233e-7 Identity = 29/97 (29.90%), Postives = 48/97 (49.48%), Query Frame = 2 Query: 284 IPKCDSNGDFLPVQCT-GSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSV--CFCADYNGKAVAG 565 IP+C +G + VQC G +C+CV+ +G I + + C ++ L+G G + C +G Y VQC+G++ C+C D G + G Sbjct: 80 IPQCSEDGRYRYVQCNRGGECWCVNSDGTEIPG-SRQNDTVVTCLTPCQLQRQRLLLSGDAGVVPRCLDSGEYEPVQCDGALGQCWCVDMEGMEIYG 175 HSP 2 Score: 51.9878 bits (123), Expect = 2.538e-7 Identity = 32/114 (28.07%), Postives = 49/114 (42.98%), Query Frame = 2 Query: 284 IPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFS------CTTNGSYSSVQCNGSVCFCADYNGKAVAGKPIVNIGQIQSLRC 607 +P+C +G + VQC GS+C+C D +G + + I +C +E+ S C +G Y S+QC G CFC D G + +G SL+C Sbjct: 626 LPQCTEDGQYQAVQCQGSECWCADSQGQEVMG-SRSIGYRPRCPSRCEKERMMAIAVKASSSAGSEVFIPKCEEDGEYVSLQCLGKSCFCLDQRGVRYS-----TLGSGSSLQC 733
BLAST of Thyroglobulin vs. Ensembl Cavefish
Match: spock1 (SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]) HSP 1 Score: 49.6766 bits (117), Expect = 1.073e-6 Identity = 33/107 (30.84%), Postives = 57/107 (53.27%), Query Frame = 2 Query: 80 IIMNKTILSLITIMNLLL-INKVYGTCQDSSD--CNNDLICIGNECSENPLNTQCFNKLNK----ARKGGLLGAPIPKCDSNGDFLPVQCTGS--KCYCVDREGNNI 373 ++++++ LS I + L + ++ +C D +N+ C C + P C N++N+ R+ L+GA IP+C +G F QC GS +C+CVD+ GN I Sbjct: 177 LLLDQSELSAIYLDKYELCMRPLFNSCDSFKDGKLSNNEWCY---CFQKPEGLPCQNEMNRIHGQGRRKALIGAYIPRCTEDGYFKATQCHGSTGQCWCVDKYGNEI 280
BLAST of Thyroglobulin vs. Ensembl Cavefish
Match: nid2b (nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]) HSP 1 Score: 49.2914 bits (116), Expect = 1.898e-6 Identity = 38/114 (33.33%), Postives = 49/114 (42.98%), Query Frame = 2 Query: 284 IPKCDSNGDFLPVQCTGSK--CYCVD-----REGNNIRNYAAHIN-----EFANMDCKCAREQNDYFLTGLIGK------MFSCTTNGSYSSVQCNG--SVCFCADYNGKAVAG 565 IP+CD G + P+QC GS C+CVD R G AH N + C R + L+ G+ M C G + SVQC G S C+C D G+ V G Sbjct: 721 IPQCDEKGQYKPLQCLGSTGHCWCVDSRGQERVGTRTLPGTAHANCDQPPLVPRAETLCERWRTT-LLSHYGGQPDPQDYMPQCDARGHFLSVQCYGNSSYCWCVDSQGREVMG 833
BLAST of Thyroglobulin vs. Ensembl Cavefish
Match: nid2a (nidogen 2a (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-030827-2]) HSP 1 Score: 48.521 bits (114), Expect = 3.654e-6 Identity = 43/138 (31.16%), Postives = 57/138 (41.30%), Query Frame = 2 Query: 212 ENPLNTQCFNKLNKARKGG-----LLGAPIPKCDSNGDFLPVQCTGSK--CYCVD-----REGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGK------MFSCTTNGSYSSVQCNGSV--CFCADYNGKAVAG 565 E P TQC + ++G L GA +P+CD G + P QC GS C+CVD R+G + N A K EQ+ L G + C G Y QC+GS C+C D G+ G Sbjct: 768 ERP-KTQCEQHRDSLQRGSDDGLTLEGAFVPECDEQGQYRPQQCHGSTGHCWCVDSRGQERQGTRTPPGSPQFNCDAPERPKTQCEQHRDSLQRGDGSPPVGAYVPQCDDQGQYRPQQCHGSTGHCWCVDSRGQERQG 904 HSP 2 Score: 47.7506 bits (112), Expect = 5.306e-6 Identity = 39/137 (28.47%), Postives = 55/137 (40.15%), Query Frame = 2 Query: 203 ECSENPLNTQCFNKLNKARKGG---LLGAPIPKCDSNGDFLPVQCTGSK--CYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGL--------IGKMF-SCTTNGSYSSVQCNGSV--CFCADYNGKAVAG 565 + E P TQC + ++G +GA +P+CD G + P QC GS C+CVD G R +C + Q + L +G C G Y QC+GS C+C D G+ G Sbjct: 842 DAPERP-KTQCEQHRDSLQRGDGSPPVGAYVPQCDDQGQYRPQQCHGSTGHCWCVDSRGQE-RQGTRTPPGSPRFNCDRPKTQCEQHRDSLQRGDGSPPVGAFVPECDEQGQYRPQQCHGSTGHCWCVDIRGQERQG 976
BLAST of Thyroglobulin vs. Ensembl Sea Lamprey
Match: tg (thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1]) HSP 1 Score: 48.9062 bits (115), Expect = 5.754e-7 Identity = 29/108 (26.85%), Postives = 45/108 (41.67%), Query Frame = 2 Query: 254 ARKGGLLGAP--IPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGL--IGKMF--------------SCTTNGSYSSVQCNGS 523 AR+G +G P +P+CD GD+ PVQC+G +C+CV G + + + C L L +G + C G + VQC+G+ Sbjct: 664 ARRGRPVGTPLFVPECDGAGDYRPVQCSGDRCFCVGAGGAEVPGTGRPLGDPVTCPTPCQAAAASELLQQLRHLGPVLRGDAPSSLPPLYVPRCDARGGWRPVQCDGA 771 HSP 2 Score: 47.7506 bits (112), Expect = 1.235e-6 Identity = 31/101 (30.69%), Postives = 40/101 (39.60%), Query Frame = 2 Query: 284 IPKC-DSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFL------TGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAG 565 + +C + G + PVQC G+ C+CVD G I A C E+ L G + C G Y VQC+G CFC G V G Sbjct: 607 VARCGEDGGAYEPVQCHGAACWCVDAHGREIAGTRAVGGAPPRCPSACEGERARALLARRGRPVGTPLFVPECDGAGDYRPVQCSGDRCFCVGAGGAEVPG 707
BLAST of Thyroglobulin vs. Ensembl Nematostella
Match: EDO40370 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S7C1]) HSP 1 Score: 55.0694 bits (131), Expect = 1.815e-9 Identity = 38/123 (30.89%), Postives = 57/123 (46.34%), Query Frame = 2 Query: 284 IPKCDSNGDFLPVQC-TGSK-CYCVDREGNNIRNYAAHI----NEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSV--CFCADYNGKAVAGKPIVNIGQIQSLRCN*DNISA 628 IP C S+G + VQC TG+K C+CVD +G + F C R + + L+ ++ +C +GSYS VQC+ S C+C+ +G G +LRC + SA Sbjct: 23 IPHCKSDGRYEEVQCHTGTKYCWCVDEKGVEVWGTRTRTFIRCAAFVKEPTPCQRAKGEALLSPETKRVPNCRPDGSYSRVQCDKSTGECWCSSEDGSETPGTRTSG-----TLRCPANEFSA 140
BLAST of Thyroglobulin vs. Ensembl Nematostella
Match: EDO40372 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S7C3]) HSP 1 Score: 53.5286 bits (127), Expect = 7.114e-9 Identity = 33/108 (30.56%), Postives = 50/108 (46.30%), Query Frame = 2 Query: 284 IPKCDSNGDFLPVQC--TGSKCYCVDREGNNIRNYAAH-INEFANMDCKCAREQNDYFLTGLIGKMFS------CTTNGSYSSVQCNG--SVCFCADYNGKAVAGKPI 574 +P+CD++G + PVQC T C+CVD++G IR + E+ Y G G + C +GSY SVQC+ C+C D +G + G + Sbjct: 75 VPRCDASGGYEPVQCLSTTGHCWCVDKDGIEIRGTRRRGVRPVCKQGYNTPCERERYRALGWTGLRVTGLWVPDCRPDGSYESVQCHALSGYCWCVDRSGHELFGTRV 182
BLAST of Thyroglobulin vs. Ensembl Nematostella
Match: EDO38469 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SCV6]) HSP 1 Score: 52.7582 bits (125), Expect = 1.362e-8 Identity = 41/136 (30.15%), Postives = 59/136 (43.38%), Query Frame = 2 Query: 224 NTQCFNKLNKARKGGLLGAP---IPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDC------KCAREQNDYFLTGLIGKMF-SCTTNGSYSSVQCNGSVCFC-------ADYNGKAVAGKPIVN 580 T C ++L A + +P +P C S G F VQC GS YC +N + + DC KC R D + IG+ +C +G+Y +QC+GS FC A+ G + GKP+ N Sbjct: 54 KTVCQSQLEAALGPDGIASPGRFVPLCTSEGKFADVQCHGSTGYCWCAHPDNGQEVTG-TRQRGQPDCSDVALSKCQRHYRDNLIYPPIGRFLPTCKPDGNYEKMQCHGSTGFCWCVDADGAELVGSRLRGKPLCN 188
BLAST of Thyroglobulin vs. Ensembl Nematostella
Match: EDO40373 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S7C4]) HSP 1 Score: 51.6026 bits (122), Expect = 2.857e-8 Identity = 35/108 (32.41%), Postives = 55/108 (50.93%), Query Frame = 2 Query: 275 GAPIPKCDSNGDFLPVQCTGSK--CYCVDREGNNIRNYAAHINEFANMDC---KCAREQNDYFLTGLIGK------MFSCTTNGSYSSVQCNGSV--CFCADYNGKAV 559 G+ +PKC S+GD+ VQC GS C+CVD +GN I + +C +E+ + G++G + +CT+ G Y VQC+ S C+C D G+ + Sbjct: 75 GSFVPKCKSSGDYDTVQCHGSTGFCWCVDDDGNEIPATRVRGRPMCGLLAGLSQCQQERQRHM--GVLGIAPPGRFVPACTSTGQYERVQCHSSTGYCWCVDKFGREL 180
BLAST of Thyroglobulin vs. Ensembl Nematostella
Match: EDO47797 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RL43]) HSP 1 Score: 48.9062 bits (115), Expect = 2.997e-7 Identity = 40/142 (28.17%), Postives = 64/142 (45.07%), Query Frame = 2 Query: 203 ECSENPLNTQCFNKLNKARKGGLLGAP-----IPKCDSNGDFLPVQC-TGSK-CYCVDREGNNI---------RNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSV--CFCADYNGKAVAGKPI 574 +C + T C + A GL G P +P+C G + VQC TG+ C+CVD G I R + A +E N + A ++ L+G + C +G ++ +QC+ + C+C D NG +AG + Sbjct: 44 DCKKAAQTTSCQRQRTAAL--GLTGRPNSARYLPQCKPTGRYEEVQCHTGTGLCWCVDERGQEITRTRTWGYPRCHMAPKSECYNRRREAAHARSARRLSGFPFFVSQCQPDGGFTPLQCHSATGFCWCVDGNGNELAGTRV 183 HSP 2 Score: 44.669 bits (104), Expect = 7.664e-6 Identity = 33/109 (30.28%), Postives = 46/109 (42.20%), Query Frame = 2 Query: 284 IPKCDSNGDFLPVQCTG--SKCYCVDREGNNIRNYAAHINEFANMDCK-------CAREQNDYFLTGLIGK------MFSCTTNGSYSSVQCN--GSVCFCADYNGKAV 559 IP C +G F VQC G +C+CVD G I + DCK C R++ GL G+ + C G Y VQC+ +C+C D G+ + Sbjct: 2 IPTCRDDGSFAEVQCHGLTGQCWCVDMNGIEI---PGSVTRGHRPDCKKAAQTTSCQRQRTAAL--GLTGRPNSARYLPQCKPTGRYEEVQCHTGTGLCWCVDERGQEI 105
BLAST of Thyroglobulin vs. Ensembl Medaka
Match: nid2a (nidogen 2 [Source:NCBI gene;Acc:101173773]) HSP 1 Score: 51.2174 bits (121), Expect = 4.907e-7 Identity = 35/116 (30.17%), Postives = 53/116 (45.69%), Query Frame = 2 Query: 272 LGAPIPKCDSNGDFLPVQCTGSK--CYCVDREGNNIRNYAAHINEFANMDCK--------CAREQNDYFLTGLIGKMFS------CTTNGSYSSVQCNGS--VCFCADYNGKAVAG 565 +GA +P+CD NG+++P QC S C+CVD G R+ +MDC C R + + G+ + C +G Y QC+GS C+C D +G+ G Sbjct: 861 VGAYVPQCDQNGEYVPQQCHTSTGYCWCVDGMGQE-RSGTRSAPGSPSMDCSKPGAPKTPCERLRESVLASSAGGRPLAGAYAPQCDEDGHYVPRQCHGSSGYCWCVDSSGQERPG 975 HSP 2 Score: 48.1358 bits (113), Expect = 4.673e-6 Identity = 37/116 (31.90%), Postives = 52/116 (44.83%), Query Frame = 2 Query: 269 LLGAPIPKCDSNGDFLPVQCTGSK--CYCVD-----REGNNIRNYAAHIN----EFANMDCKCAREQ---NDYFLTGLIGKMF-SCTTNGSYSSVQCNGSV--CFCADYNGKAVAG 565 L GA P+CD +G ++P QC GS C+CVD R G A ++ E +C+ RE+ + G+ C G Y S QC+GS C+C D G+ G Sbjct: 937 LAGAYAPQCDEDGHYVPRQCHGSSGYCWCVDSSGQERPGTRTSPGAPSVDCKEPEAPKTECELLRERAMASSPEAVPAAGRFVPQCDAEGRYLSQQCHGSTGHCWCVDSRGQERPG 1052 HSP 3 Score: 47.3654 bits (111), Expect = 7.231e-6 Identity = 35/116 (30.17%), Postives = 52/116 (44.83%), Query Frame = 2 Query: 269 LLGAPIPKCDSNGDFLPVQCTGSK--CYCVD-----REGNNIRNYAAHI--NEFANMDCKCAREQNDYFLT------GLIGKMFSCTTNGSYSSVQCNGSV--CFCADYNGKAVAG 565 LLG +P+CD +G +LP QC S C+CVD R G +A + NE + +C R + + + + C NG Y QC+ S C+C D G+ +G Sbjct: 783 LLGVYVPQCDESGKYLPQQCHDSTGYCWCVDSTGQERTGTRTPPGSALVDCNEQPHYKTRCERHREHVLASEREDRPSVGAYVPQCDQNGEYVPQQCHTSTGYCWCVDGMGQERSG 898
BLAST of Thyroglobulin vs. Ensembl Medaka
Match: nid2a (nidogen 2 [Source:NCBI gene;Acc:101173773]) HSP 1 Score: 50.8322 bits (120), Expect = 6.024e-7 Identity = 35/119 (29.41%), Postives = 53/119 (44.54%), Query Frame = 2 Query: 272 LGAPIPKCDSNGDFLPVQCTGSK--CYCVDREGNNIRNYAAHINEFANMDCK-----------CAREQNDYFLTGLIGKMFS------CTTNGSYSSVQCNGS--VCFCADYNGKAVAG 565 +GA +P+CD NG+++P QC S C+CVD G R+ +MDC C R + + G+ + C +G Y QC+GS C+C D +G+ G Sbjct: 940 VGAYVPQCDQNGEYVPQQCHTSTGYCWCVDGMGQE-RSGTRSAPGSPSMDCSKPDEALQPKTPCERLRESVLASSAGGRPLAGAYAPQCDEDGHYVPRQCHGSSGYCWCVDSSGQERPG 1057 HSP 2 Score: 48.1358 bits (113), Expect = 4.649e-6 Identity = 36/119 (30.25%), Postives = 51/119 (42.86%), Query Frame = 2 Query: 269 LLGAPIPKCDSNGDFLPVQCTGSK--CYCVDREGN------------NIRNYAAHINEFANMDCKCAREQ---NDYFLTGLIGKMF-SCTTNGSYSSVQCNGSV--CFCADYNGKAVAG 565 L GA P+CD +G ++P QC GS C+CVD G ++ A E +C+ RE+ + G+ C G Y S QC+GS C+C D G+ G Sbjct: 1019 LAGAYAPQCDEDGHYVPRQCHGSSGYCWCVDSSGQERPGTRTSPGAPSVDCSRAEEPEAPKTECELLRERAMASSPEAVPAAGRFVPQCDAEGRYLSQQCHGSTGHCWCVDSRGQERPG 1137
BLAST of Thyroglobulin vs. Planmine SMEST
Match: SMESG000016977.1 (SMESG000016977.1) HSP 1 Score: 351.288 bits (900), Expect = 9.594e-125 Identity = 173/175 (98.86%), Postives = 175/175 (100.00%), Query Frame = 2 Query: 86 MNKTILSLITIMNLLLINKVYGTCQDSSDCNNDLICIGNECSENPLNTQCFNKLNKARKGGLLGAPIPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAGKPIVNIGQIQSLRCN 610 MNKTILSLITIMNLLLINKVYGTCQDSSDCNNDLICIGNECS+NPLNTQCFNKL+KARKGGLLGAPIPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAGKPIVNIGQIQSLRCN Sbjct: 1 MNKTILSLITIMNLLLINKVYGTCQDSSDCNNDLICIGNECSDNPLNTQCFNKLSKARKGGLLGAPIPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAGKPIVNIGQIQSLRCN 175
BLAST of Thyroglobulin vs. Planmine SMEST
Match: SMESG000016977.1 (SMESG000016977.1) HSP 1 Score: 330.102 bits (845), Expect = 1.881e-116 Identity = 162/164 (98.78%), Postives = 164/164 (100.00%), Query Frame = 2 Query: 119 MNLLLINKVYGTCQDSSDCNNDLICIGNECSENPLNTQCFNKLNKARKGGLLGAPIPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAGKPIVNIGQIQSLRCN 610 MNLLLINKVYGTCQDSSDCNNDLICIGNECS+NPLNTQCFNKL+KARKGGLLGAPIPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAGKPIVNIGQIQSLRCN Sbjct: 1 MNLLLINKVYGTCQDSSDCNNDLICIGNECSDNPLNTQCFNKLSKARKGGLLGAPIPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAGKPIVNIGQIQSLRCN 164
BLAST of Thyroglobulin vs. Planmine SMEST
Match: SMESG000016994.1 (SMESG000016994.1) HSP 1 Score: 131.339 bits (329), Expect = 5.172e-38 Identity = 70/176 (39.77%), Postives = 100/176 (56.82%), Query Frame = 2 Query: 98 ILSLITIMNLLLINKVYGTCQDSSD-CNNDLICIGNE-CSENPLNTQCFNKLNKARK---GGLLGAPIPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAGKPIVNIGQIQSLRCN 610 ++SL + + + C + D CN L C NE C E+ CF K R+ ++G +P C+ NGD+ PVQC GS C+CVD+ G I +++ I + N CKCA+++++Y LIG+ F C G+Y QC+GSVCFCAD NGK +G P VNIGQ+ L+C Sbjct: 6 VISLFASCVFCEVLEEFQLCLNEEDKCNYGLFC--NEICEEDEEAPDCFKKHLDVRRKLANKVIGIRLPNCEENGDYKPVQCLGSVCHCVDKHGERIEGFSSPIYKSTNKTCKCAKDRDEYQKLRLIGRYFGCDNQGNYKRTQCHGSVCFCADENGKKTSGSPTVNIGQLDQLKCE 179
BLAST of Thyroglobulin vs. Planmine SMEST
Match: SMESG000017161.1 (SMESG000017161.1) HSP 1 Score: 121.324 bits (303), Expect = 2.426e-34 Identity = 68/168 (40.48%), Postives = 98/168 (58.33%), Query Frame = 2 Query: 104 SLITIMNLLLINKVYGTCQDSSDCNNDLICIGNECSENPLNTQCFNKLNKARKGGLLGAPIPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAGKPIVNIGQIQSLRC 607 S+I + L LI+ +G C DS C + +C+ CS+NPL T+C+ + +K K L G+ IP C +NG + PVQC + CYC +G I NY +INE N +CKC ++ Y L +G +F+C NGSY +QC GS C+C D GK + G V+I + L+C Sbjct: 3 SVIGCVFLALIHAAFG-CNDSKGCTDLEVCVSGNCSKNPLTTKCYQEYDKVMKNLLFGSFIPCCKTNGIYCPVQCPTNICYCSSPDGKKISNY-FNINE--NSNCKCGLDKYLYSLNMAVGIIFNCNENGSYRPIQCLGSSCYCVDAQGKKIPGTISVHIEKANELKC 166
BLAST of Thyroglobulin vs. Planmine SMEST
Match: SMESG000016992.1 (SMESG000016992.1) HSP 1 Score: 117.087 bits (292), Expect = 1.887e-32 Identity = 60/149 (40.27%), Postives = 85/149 (57.05%), Query Frame = 2 Query: 173 CNNDLICIGNECSENPLNTQCFNK---LNKARKGGLLGAPIPKCDSNGDFLPVQCTGSKCYCVDREGNNIRNYAAHINEFANMDCKCAREQNDYFLTGLIGKMFSCTTNGSYSSVQCNGSVCFCADYNGKAVAGKPIVNIGQIQSLRCN 610 CN L C C E+ CF + + + K +LGA P C+ NGD+ +QC GS CYC D+ G I + I+ AN +CKCA+E+++Y LIG+ F C+ G+Y QC+GSVC+CAD +GK V G V+I L+C+ Sbjct: 32 CNYGLSC-DKVCKEDTEAPDCFKQHLAVRRRWKEHILGARAPSCEENGDYKALQCVGSVCYCSDKNGVEISGFITPIHLSANKNCKCAKERDEYHKKHLIGRFFRCSELGNYEKAQCHGSVCYCADEDGKKVEGSQTVHIVDFDKLKCD 179 The following BLAST results are available for this feature:
BLAST of Thyroglobulin vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 1
BLAST of Thyroglobulin vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Thyroglobulin vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of Thyroglobulin vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Thyroglobulin vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Thyroglobulin vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 1
BLAST of Thyroglobulin vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Thyroglobulin vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Thyroglobulin vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 4
BLAST of Thyroglobulin vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Thyroglobulin vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Thyroglobulin vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Thyroglobulin vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 2
BLAST of Thyroglobulin vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30016345 ID=SMED30016345|Name=Thyroglobulin|organism=Schmidtea mediterranea sexual|type=transcript|length=729bpback to top protein sequence of SMED30016345-orf-1 >SMED30016345-orf-1 ID=SMED30016345-orf-1|Name=SMED30016345-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=176bp MNKTILSLITIMNLLLINKVYGTCQDSSDCNNDLICIGNECSENPLNTQCback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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