SMED30016314

Overview
NameSMED30016314
Smed IDSMED30016314
Length (bp)2110
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30016314 (SMED30016314) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30016314 (SMED30016314) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30016314 (SMED30016314) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30016314 (SMED30016314) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30016314

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
cephalic gangliaSMED30016314SMESG000011577.1 dd_Smed_v4_7855_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30016314SMESG000011577.1 dd_Smed_v4_7855_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30016314SMESG000011577.1 Contig39343newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30016314SMESG000011577.1 Contig39343uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
dorsal-ventral muscle cellSMED30016314SMESG000011577.1 dd_Smed_v4_7855_0_1dd_Smed_v4PMID:30471994
Scimone et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Category 2 cellSMED30016314SMESG000011577.1 dd_Smed_v4_7855_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of SMED30016314 vs. Ensembl Celegans
Match: K09F5.6 (pep chromosome:WBcel235:X:7719272:7725583:1 gene:WBGene00044698.1 transcript:K09F5.6.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:K09F5.6)

HSP 1 Score: 67.3958 bits (163), Expect = 2.893e-11
Identity = 95/453 (20.97%), Postives = 185/453 (40.84%), Query Frame = 2 
Query:   98 LSRTWLFIWLIGISTYLSVKSVKRYLKIKTWQFETAEKREFSNGILTMYLTXXXXXXXXXLCCVF-------CILVKTGNYANDSAKFGVKSLDFKTLRIKLHREEMDSQFIQANRKRRSQFWIRMKHHFPAFYCCFYFVMS----------FSFISVLPYVESEEI---RMDLEHQRNIWF-TNL---DVMFNTYPMNDDPSRIAPISP----------------EFFNICISLIVHAFSYGSVFWKFNRYFSFIFTVFVFINGLLFILDFGLLEMLIKI------SKNADSLKSLLKNSEQLEFQ-WTPLISLLSIMSYLFML-VSQLSLFEYGYNRVKDALI---KRPSNDMNDNCPTYINGSNVS-TKVQYAWKQLCIESWGQIMKLFVIGIIATIFSILVKLPYLYKSMKILYTNRNSDIVLTNVVVSILYLVSTVILWTYLILKSNW 1300
            LS  W  I    + +YL     +RY      ++ T     +  G L  Y T         LCC+        C + K+GN A D+ +   +  + + L +  ++    S  +   +      W     H P      + +++          FS +    +V S +     +D  +QR+    TNL   +     + +  D     P+SP                E  N+ I+L+  A +Y +VFW+ ++ FS IF++ + I     I  +    +L +I      S  A  L   L   + L F  + P + L S +  L M  ++ ++++ YGYN++   ++    R +   +     Y +    S T+V     +LC +  G +  +  I ++  +   +   P +Y ++ ILY +    ++LT +++ ++Y+ S +++W  + LK +W
Sbjct:   12 LSSIWYTILTTLLQSYLLYLGFERYRLYNEIKWPTGG---YPYGYLMAYATIY-------LCCIIATFLFFTCGVFKSGNIAGDNERLADR--EERVLEVSRNQNGEKSGCVHGAKV----LW----QHLPPLPQQLHVIIAVAQLIAQQLMFSQLFRHGFVNSGDFLNTELDFLYQRSRQLATNLPIGETRLQGFRITADELAGLPVSPNLLPVLMHMKLFGIPLEMVNLFIALVAFAIAYPAVFWRVSKPFSVIFSLHLVIYAAQVIWGYLSFSILFRIQETNIHSVRAVGLGQYLGPIKPLGFHIYHPYVILGSFVVRLVMTTLAPMAMYSYGYNKLYANVLNVQHRNAARTSQGQAEYGDYRRRSYTRVD--GNKLCCD--GYLPHMDAIALLVIVAGAIG--PTIY-ALLILYQHEQKALILTCIIIDVVYMFSWILMWLGMTLKRDW 437
[Close]
BLAST of SMED30016314 vs. TrEMBL
Match: A0A267GLJ3 (Uncharacterized protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig030458g2 PE=4 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.182e-20
Identity = 103/417 (24.70%), Postives = 176/417 (42.21%), Query Frame = 2 
Query:   95 KLSRTWLFIWLIGISTYLSVKSVKRYLKIKTWQFETAEKREFSNGILTMYLTXXXXXXXXXLCCVFCILVKTGNYANDSAKFGVKSLDFKTLRIKLHREEMDSQFIQANRKRRSQFWIRMKHHFPAFYCCFYFVMSFSFISVLPYVESEEIRMDLEHQRNIWFTNLDVMFNTYPMNDDPSRIAPISPEFFNICISLIVHAFSYGSVFWKFNRYFSFIFTVFVFINGLLFILDFGLLEMLIKISKNADSLKSLLKNSEQLEFQWTPLISLLSIMSYLFMLVSQLSLFEYGYNRVKDALIK---------------RPSNDMNDNCPTYINGSNVSTKVQYAWKQLCIESWGQIMKLFVIGIIATIFSILVKLPYLYKSMKILYTNRNSDIVLTNVVVSILYLVSTVILWTYLILKSNW 1300
            K+ R W  I ++ ++ +L   + +RY   +      A + ++    +  YL  +I+ +      ++  L KT NYA D  + G    D   LR+ +  E       QA          R++ HF  + C  + + +F  +  +P +E+ EI         IW TNLD +++        S    + PE FN+ ++L +    Y S FW  NR F+F+F+V + + GL  +L +    +L K S + D +        Q+      +I+L SI   L +LV+ ++ FE+GY ++   L K               R  +  ND  P ++N         YA                + GI+  + ++L K P L+  +  LY       +L  VV   +YL   V +W  L  K+NW
Sbjct:   43 KMWRIWYAILVLALNAFLLYSAFQRYASFRA----KALREQWDMSPMNFYLAMMILTVFLLPFFLYAALAKTANYAEDGVQIG---RDRDCLRVAI-AETSSGAGAQATV---GTCMSRLRRHFMPYTCLLHVLTAFCLLIPMPVLEAAEIHHAKRPSDEIWRTNLDFIYHP-----KASATNSVCPEVFNLMLALAILLVRYPSTFWFSNRAFAFMFSVILCVCGLHIVLSYEATSVLFKASMSNDVVT-------QVNLLPPAIIALHSIGD-LLLLVANIAFFEFGYAQMLSNLRKYRNYLQLEASSSVSDRSISSCNDETPCWLN---------YA--------------PHLAGILLMVVAVLCKAPVLWDWVG-LYRVHQQPAMLAAVVSGGIYLSLWVSVWFLLGFKANW 411
[Close]
BLAST of SMED30016314 vs. TrEMBL
Match: A0A267E669 (Uncharacterized protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig030458g3 PE=4 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 8.834e-20
Identity = 102/417 (24.46%), Postives = 175/417 (41.97%), Query Frame = 2 
Query:   95 KLSRTWLFIWLIGISTYLSVKSVKRYLKIKTWQFETAEKREFSNGILTMYLTXXXXXXXXXLCCVFCILVKTGNYANDSAKFGVKSLDFKTLRIKLHREEMDSQFIQANRKRRSQFWIRMKHHFPAFYCCFYFVMSFSFISVLPYVESEEIRMDLEHQRNIWFTNLDVMFNTYPMNDDPSRIAPISPEFFNICISLIVHAFSYGSVFWKFNRYFSFIFTVFVFINGLLFILDFGLLEMLIKISKNADSLKSLLKNSEQLEFQWTPLISLLSIMSYLFMLVSQLSLFEYGYNRVKDALIK---------------RPSNDMNDNCPTYINGSNVSTKVQYAWKQLCIESWGQIMKLFVIGIIATIFSILVKLPYLYKSMKILYTNRNSDIVLTNVVVSILYLVSTVILWTYLILKSNW 1300
            K+ R W  I ++ ++ +L   + +RY   +      A + ++    +  YL  +I+ +      ++  L KT NYA D  + G    D   LR+ +  E       QA          R++ HF  + C  + + +F  +  +P +E+ EI         IW TNLD +++        S    + PE FN+ ++L +    Y S FW  NR F+F+F+V + + GL  +L +    +L K S +   +        Q+      +I+L SI   L +LV+ ++ FE+GY ++   L K               R  +  ND  P ++N         YA                + GI+  + ++L K P L+  +  LY       +L  VV   +YL   V +W  L  K+NW
Sbjct:   43 KMWRIWYAILVLALNAFLLYSAFQRYASFRA----KALREQWDMSPMNFYLAMMILTVFLLPFFLYAALAKTANYAEDGVQIG---RDRDCLRVAI-AETSSGAGAQATV---GTCMSRLRRHFMPYTCLLHVLTAFCLLIPMPVLEAAEIHHAKRPSDEIWRTNLDFIYHP-----KASATNSVCPEVFNLMLALAILLVRYPSTFWFSNRAFAFMFSVILCVCGLHIVLSYEATSVLFKASMSNGVVT-------QVNLLPPAIIALHSIGD-LLLLVANIAFFEFGYAQMLSNLRKYRNYLQLEASSSVSDRSISSCNDETPCWLN---------YA--------------PHLAGILLMVVAVLCKAPVLWDWVG-LYRVHQQPAMLAAVVSGGIYLSLWVSVWFLLGFKANW 411
[Close]
BLAST of SMED30016314 vs. TrEMBL
Match: A0A267H7U1 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig030458g1 PE=4 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 9.065e-20
Identity = 103/417 (24.70%), Postives = 175/417 (41.97%), Query Frame = 2 
Query:   95 KLSRTWLFIWLIGISTYLSVKSVKRYLKIKTWQFETAEKREFSNGILTMYLTXXXXXXXXXLCCVFCILVKTGNYANDSAKFGVKSLDFKTLRIKLHREEMDSQFIQANRKRRSQFWIRMKHHFPAFYCCFYFVMSFSFISVLPYVESEEIRMDLEHQRNIWFTNLDVMFNTYPMNDDPSRIAPISPEFFNICISLIVHAFSYGSVFWKFNRYFSFIFTVFVFINGLLFILDFGLLEMLIKISKNADSLKSLLKNSEQLEFQWTPLISLLSIMSYLFMLVSQLSLFEYGYNRVKDALIK---------------RPSNDMNDNCPTYINGSNVSTKVQYAWKQLCIESWGQIMKLFVIGIIATIFSILVKLPYLYKSMKILYTNRNSDIVLTNVVVSILYLVSTVILWTYLILKSNW 1300
            K+ R W  I ++ ++ +L   + +RY   +      A + ++    +  YL  +II +      ++  L KT NYA D  + G    D   LR+ +  E       QA          R++ HF  + C  + + +F  +  +P +E+ EI         IW TNLD +++        S    + PE FN+ ++L +    Y S FW  NR F+F+F+V + + GL  +L +    +L K S +   +        Q+      +I+L SI   L +LV+ ++ FE+GY ++   L K               R  +  ND  P ++N         YA                + GI+  + ++L K P L+  +  LY       +L  VV   +YL   V +W  L  K+NW
Sbjct:   10 KMWRIWYAILVLALNAFLLYSAFQRYASFRA----KALREQWDMSPMNFYLAMMIITVFLLPFFLYAALAKTANYAEDGVQIG---RDRDCLRVAI-AETSSGAGAQATV---GTCMSRLRRHFMPYTCLLHVLTAFCLLIPMPVLEAAEIHHAKRPSDEIWRTNLDFIYHP-----KASATNSVCPEVFNLMLALAILLVRYPSTFWFSNRAFAFMFSVILCVCGLHIVLSYEATSVLFKASMSNGVVT-------QVNLLPPAIIALHSIGD-LLLLVANIAFFEFGYAQMLSNLRKYRNYLQLEASSSVSDRSISSCNDETPCWLN---------YA--------------PHLAGILLMVVAVLCKAPVLWDWVG-LYRVHQQPAMLAAVVSGGIYLSLWVSVWFLLGFKANW 378
[Close]
BLAST of SMED30016314 vs. TrEMBL
Match: A0A1I8HYR5 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.218e-18
Identity = 98/417 (23.50%), Postives = 172/417 (41.25%), Query Frame = 2 
Query:   95 KLSRTWLFIWLIGISTYLSVKSVKRYLKIKTWQFETAEKREFSNGILTMYLTXXXXXXXXXLCCVFCILVKTGNYANDSAKFGVKSLDFKTLRIKLHREEMDSQFIQANRKRRSQFWIRMKHHFPAFYCCFYFVMSFSFISVLPYVESEEIRMDLEHQRNIWFTNLDVMFNTYPMNDDPSRIAPISPEFFNICISLIVHAFSYGSVFWKFNRYFSFIFTVFVFINGLLFILDFGLLEMLIKISKNADSLKSLLKNSEQLEFQWTPLISLLSIMSYLFMLVSQLSLFEYGYNRVKDALIK---------------RPSNDMNDNCPTYINGSNVSTKVQYAWKQLCIESWGQIMKLFVIGIIATIFSILVKLPYLYKSMKILYTNRNSDIVLTNVVVSILYLVSTVILWTYLILKSNW 1300
            K+ R W  I ++ ++ +L   + +RY   +      A + ++    +  YL  +I+ +      ++  L KT NYA D  + G    D   LR+ +      +                ++ HF  + C  + + +F  +  +P +E+ EI         IW TNLD +++        S    + PE FN+ ++L +    Y S FW  NR F+F+F+V + + GL  +L +    +L K S +   +        Q+      +I+L SI   L +LV+ ++ FE+GY ++   L K               R  +  ND  P ++N         YA                + GI+  + ++L K P L+  +  LY       +L  VV   +YL   V +W  L  K+NW
Sbjct:   17 KMWRIWYAILVLALNAFLLYSAFQRYASFRA----KALREQWDMSPMNFYLAMMILTVFLLPFFLYAALAKTANYAEDGVQIG---RDRDCLRVAIAETSSGAA--------------ALRRHFMPYTCLLHVLTAFCLLIPMPVLEAAEIHHAKRPSDEIWRTNLDFIYH-----PKASATNSVCPEVFNLMLALAILLVRYPSTFWFSNRAFAFMFSVILCVCGLHIVLSYEATSVLFKASMSNGVVT-------QVNLLPPAIIALHSIGD-LLLLVANIAFFEFGYAQMLSNLRKYRNYLQLEASSSVSDRSISSCNDETPCWLN---------YA--------------PHLAGILLMVVAVLCKAPVLWDWVG-LYRVHQQPAMLAAVVSGGIYLSLWVSVWFLLGFKANW 375
[Close]
BLAST of SMED30016314 vs. TrEMBL
Match: A0A1I8IPE7 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.264e-17
Identity = 101/419 (24.11%), Postives = 171/419 (40.81%), Query Frame = 2 
Query:   95 KLSRTWLFIWLIGISTYLSVKSVKRYLKIKTWQFETAEKREFSNGILTMYLTXXXXXXXXXLCCVFCILVKTGNYANDSAKFGVKSLDFKTLRIKLHREEMDSQFIQANRKRRSQFWIRMKHHFPAFYCCFYFVMSFSFISVLPYVESEEIRMDLEHQRNIWFTNLDVMFNTYPMNDDPSRIAPISPEFFNICISLIVHAFSYGSVFWKFNRYFSFIFTVFVFINGLLFILDFGLLEMLIKISKNADSLKSLLKNSEQLEFQWTP--LISLLSIMSYLFMLVSQLSLFEYGYNRVKDALIK---------------RPSNDMNDNCPTYINGSNVSTKVQYAWKQLCIESWGQIMKLFVIGIIATIFSILVKLPYLYKSMKILYTNRNSDIVLTNVVVSILYLVSTVILWTYLILKSNW 1300
            K+ R W  I ++ ++ +L   + +RY   +      A + ++    +  YL  +I+ +      ++  L KT NYA D  + G    D   LR+ +  E       QA          R++ HF  + C  + + +F  +  +P +E+ EI         IW TNLD +++        S    + PE FN+ ++L +    Y S FW  NR F+F+F+V + + GL                 +   LK  + N    +    P  +I+L SI   L +LV+ ++ FE+GY ++   L K               R  +  ND  P ++N         YA                + GI+  + ++L K P L+  +  LY       +L  VV   +YL   V +W  L  K+NW
Sbjct:   10 KMWRIWYAILVLALNAFLLYSAFQRYASFRA----KALREQWDMSPMNFYLAMMILTVFLLPFFLYAALAKTANYAEDGVQIG---RDRDCLRVAIA-ETSSGAGAQATVGTCMS---RLRRHFMPYTCLLHVLTAFCLLIPMPVLEAAEIHHAKRPSDEIWRTNLDFIYH-----PKASATNSVCPEVFNLMLALAILLVRYPSTFWFSNRAFAFMFSVILCVCGL-----------------HICCLKPSMSNGVVTQVNLLPPAIIALHSIGD-LLLLVANIAFFEFGYAQMLSNLRKYRNYLQLEASSSVSDRSISSCNDETPCWLN---------YA--------------PHLAGILLMVVAVLCKAPVLWDWVG-LYRVHQQPAMLAAVVSGGIYLSLWVSVWFLLGFKANW 370
[Close]
BLAST of SMED30016314 vs. Planmine SMEST
Match: SMESG000011577.1 (SMESG000011577.1)

HSP 1 Score: 1293.1 bits (3345), Expect = 0.000e+0
Identity = 638/639 (99.84%), Postives = 639/639 (100.00%), Query Frame = 2 
Query:   74 MKLLLCSKLSRTWLFIWLIGISTYLSVKSVKRYLKIKTWQFETAEKREFSNGILTMYLTXXXXXXXXXLCCVFCILVKTGNYANDSAKFGVKSLDFKTLRIKLHREEMDSQFIQANRKRRSQFWIRMKHHFPAFYCCFYFVMSFSFISVLPYVESEEIRMDLEHQRNIWFTNLDVMFNTYPMNDDPSRIAPISPEFFNICISLIVHAFSYGSVFWKFNRYFSFIFTVFVFINGLLFILDFGLLEMLIKISKNADSLKSLLKNSEQLEFQWTPLISLLSIMSYLFMLVSQLSLFEYGYNRVKDALIKRPSNDMNDNCPTYINGSNVSTKVQYAWKQLCIESWGQIMKLFVIGIIATIFSILVKLPYLYKSMKILYTNRNSDIVLTNVVVSILYLVSTVILWTYLILKSNWSIHNYRDPIPAMNGECNMFIPKPSNEIITIPVYASVNRHPPSSPPVDQEPNLPLFCDKMATQWRYSCSPASCAPNDSNSNSDRTVSGKNQDIGNKKNYIYLSRINPGMDSPNFSQGIYSQLVKLTPQLSLTDNMMETDNTAVPIALSNEASDNSSNQTVHIIGPSSTDLSRCTIERASIRNRPEINSEIAPPEYFNIISTNSPLIITRHIYEQTQSSNADAESNNLCTQV 1990
            MKLLLCSKLSRTWLFIWLIGISTYLSVKS+KRYLKIKTWQFETAEKREFSNGILTMYLTSIIIGISSSLCCVFCILVKTGNYANDSAKFGVKSLDFKTLRIKLHREEMDSQFIQANRKRRSQFWIRMKHHFPAFYCCFYFVMSFSFISVLPYVESEEIRMDLEHQRNIWFTNLDVMFNTYPMNDDPSRIAPISPEFFNICISLIVHAFSYGSVFWKFNRYFSFIFTVFVFINGLLFILDFGLLEMLIKISKNADSLKSLLKNSEQLEFQWTPLISLLSIMSYLFMLVSQLSLFEYGYNRVKDALIKRPSNDMNDNCPTYINGSNVSTKVQYAWKQLCIESWGQIMKLFVIGIIATIFSILVKLPYLYKSMKILYTNRNSDIVLTNVVVSILYLVSTVILWTYLILKSNWSIHNYRDPIPAMNGECNMFIPKPSNEIITIPVYASVNRHPPSSPPVDQEPNLPLFCDKMATQWRYSCSPASCAPNDSNSNSDRTVSGKNQDIGNKKNYIYLSRINPGMDSPNFSQGIYSQLVKLTPQLSLTDNMMETDNTAVPIALSNEASDNSSNQTVHIIGPSSTDLSRCTIERASIRNRPEINSEIAPPEYFNIISTNSPLIITRHIYEQTQSSNADAESNNLCTQV
Sbjct:    1 MKLLLCSKLSRTWLFIWLIGISTYLSVKSLKRYLKIKTWQFETAEKREFSNGILTMYLTSIIIGISSSLCCVFCILVKTGNYANDSAKFGVKSLDFKTLRIKLHREEMDSQFIQANRKRRSQFWIRMKHHFPAFYCCFYFVMSFSFISVLPYVESEEIRMDLEHQRNIWFTNLDVMFNTYPMNDDPSRIAPISPEFFNICISLIVHAFSYGSVFWKFNRYFSFIFTVFVFINGLLFILDFGLLEMLIKISKNADSLKSLLKNSEQLEFQWTPLISLLSIMSYLFMLVSQLSLFEYGYNRVKDALIKRPSNDMNDNCPTYINGSNVSTKVQYAWKQLCIESWGQIMKLFVIGIIATIFSILVKLPYLYKSMKILYTNRNSDIVLTNVVVSILYLVSTVILWTYLILKSNWSIHNYRDPIPAMNGECNMFIPKPSNEIITIPVYASVNRHPPSSPPVDQEPNLPLFCDKMATQWRYSCSPASCAPNDSNSNSDRTVSGKNQDIGNKKNYIYLSRINPGMDSPNFSQGIYSQLVKLTPQLSLTDNMMETDNTAVPIALSNEASDNSSNQTVHIIGPSSTDLSRCTIERASIRNRPEINSEIAPPEYFNIISTNSPLIITRHIYEQTQSSNADAESNNLCTQV 639
[Close]
BLAST of SMED30016314 vs. Planmine SMEST
Match: SMESG000008310.1 (SMESG000008310.1)

HSP 1 Score: 129.413 bits (324), Expect = 8.733e-31
Identity = 107/415 (25.78%), Postives = 203/415 (48.92%), Query Frame = 2 
Query:   89 CSKLSRTWLFIWLIGISTYLSVKSVKRYLKIKTWQFETAEKREFSNGILTMYLTXXXXXXXXXLCCVFCILVKTGNYANDSAKFGVKSLDFKTLRIKLHREE---MDSQFIQANRKRRSQFWIRMKHHFPAFYCCFYFVMSFSFISVLPYVESEEIRMDLEHQRNIWFTNLDVMFNTYPMNDDPSRIAP------ISPEFFNICISLIVHAFSYGSVFWKFNRYFSFIFTVFVFINGLLFILDFGLLEMLIKISKNADSLKSLLKNSEQLEFQWTPLIS--LLSIMSYLFMLVSQLSLFEYGYNRVKDALIKRPSNDMNDNCPTYINGSNVSTKVQYAWKQLCIESWGQIMKLFVIGIIATIFSILVKLPYLYKSMKILYTNRNSDIVLTNVVVSILYLVSTVILWTYLILKSNW 1300
            C +L R W FI+L+ +  YL    + RY+K K +  +      +S   + +YL  II G++     ++CIL   GNYA+D+ K G  + +FK     +H+E         +    K ++  W R+K HF  +    +FV +  F+  +P++E+ +I   +     IW ++LD +++    + D            + P++FN+   L+     Y +VFW  ++ FSF F++ + +  L  I+D+    +LI+++ N + +      +E+L   +   IS  LLSI+    +L++   +FE+G+++  D L  R  + M   C    +GSN+S       K L +  +   +  F   I       ++K P  Y S+ ++Y + +  ++L N+++++L++ +  I W    LK NW
Sbjct:    7 CLRLWRIWNFIFLVVLYIYLVYDCIFRYIKFKKYSLDLGFGSNYSAVHMNIYLICIISGLTCFPFSLYCILFFNGNYADDNIKVGKDTDNFK-----IHQENDVTWQPDELTNLEKSKNILWKRLKRHFLPYSFIMHFVSAICFLVPIPFLEAHQIHQKVLKPNEIWHSDLDFLWDIDSWHSDFDNNGRWRTTWLMKPQYFNLIFCLLCLVLKYPNVFWACHKGFSFTFSLLLTLISLHVIIDYSTTCVLIRVASNPEFV------AEKLRITFLSPISLMLLSILGSSVLLLTFWCVFEFGFHQFLDNL-SRYRHLMLIQCDGSHDGSNMSDITCCKRKDLYLRGY---LPHFG-AIFGCAIGFIMKTPLFYASISVIYHHTSDPLMLLNLLLAVLFICAWFIAWFGFTLKPNW 405
[Close]
BLAST of SMED30016314 vs. Planmine SMEST
Match: SMESG000008310.1 (SMESG000008310.1)

HSP 1 Score: 109.383 bits (272), Expect = 1.854e-24
Identity = 88/349 (25.21%), Postives = 171/349 (49.00%), Query Frame = 2 
Query:  287 VFCILVKTGNYANDSAKFGVKSLDFKTLRIKLHREE---MDSQFIQANRKRRSQFWIRMKHHFPAFYCCFYFVMSFSFISVLPYVESEEIRMDLEHQRNIWFTNLDVMFNTYPMNDDPSRIAP------ISPEFFNICISLIVHAFSYGSVFWKFNRYFSFIFTVFVFINGLLFILDFGLLEMLIKISKNADSLKSLLKNSEQLEFQWTPLIS--LLSIMSYLFMLVSQLSLFEYGYNRVKDALIKRPSNDMNDNCPTYINGSNVSTKVQYAWKQLCIESWGQIMKLFVIGIIATIFSILVKLPYLYKSMKILYTNRNSDIVLTNVVVSILYLVSTVILWTYLILKSNW 1300
            ++CIL   GNYA+D+ K G  + +FK     +H+E         +    K ++  W R+K HF  +    +FV +  F+  +P++E+ +I   +     IW ++LD +++    + D            + P++FN+   L+     Y +VFW  ++ FSF F++ + +  L  I+D+    +LI+++ N + +      +E+L   +   IS  LLSI+    +L++   +FE+G+++  D L  R  + M   C    +GSN+S       K L +  +   +  F   I       ++K P  Y S+ ++Y + +  ++L N+++++L++ +  I W    LK NW
Sbjct:   19 LYCILFFNGNYADDNIKVGKDTDNFK-----IHQENDVTWQPDELTNLEKSKNILWKRLKRHFLPYSFIMHFVSAICFLVPIPFLEAHQIHQKVLKPNEIWHSDLDFLWDIDSWHSDFDNNGRWRTTWLMKPQYFNLIFCLLCLVLKYPNVFWACHKGFSFTFSLLLTLISLHVIIDYSTTCVLIRVASNPEFV------AEKLRITFLSPISLMLLSILGSSVLLLTFWCVFEFGFHQFLDNL-SRYRHLMLIQCDGSHDGSNMSDITCCKRKDLYLRGY---LPHFG-AIFGCAIGFIMKTPLFYASISVIYHHTSDPLMLLNLLLAVLFICAWFIAWFGFTLKPNW 351
[Close]
BLAST of SMED30016314 vs. Planmine SMEST
Match: SMESG000051307.1 (SMESG000051307.1)

HSP 1 Score: 105.916 bits (263), Expect = 2.967e-23
Identity = 97/427 (22.72%), Postives = 190/427 (44.50%), Query Frame = 2 
Query:   89 CSKLSRTWLFIWLIGISTYLSVKSVKRYLKIKTWQFETAEKREFSNGILTMYLTXXXXXXXXXLCCVFCILVKTGNYANDSAKFGVKSLDFKTLRIKLHREEMDSQFIQANRKR---RSQFWIRMKHHFPAFYCCFYFVMSFSFISVLPYVESEEIRMDLEHQRNIWFTNLDVMFNTYPMNDDP--------SRIAPISPEFFNICISLIVHAFSYGSVFWKFNRYFSFIFTVFVFINGLLFILDFGLLEMLIKISKNADSLKSLLKNSEQLEFQWTPLISLLSIMSYLFMLVSQLSLFEYGYNRVKDALIKRPSNDMND--NCPTYINGSN--------VSTKVQYAWKQLCIES-WGQIMKLFVIGIIATIFSILVKLPYLYKSMKILYTNRNSDIVLTNVVVSILYLVSTVILWTYLILKSNWS 1303
            C KL   W   +LI I+ YL+  ++  YL  K    +    R +   +  + L  III +      ++  ++  GN+AND   FG     F  +      E   +  +  N++R   + +F   +    P        V ++ ++   P++++ +I   +     IW T+LD++F+  P +  P        S I P++  +FN   SL + +  Y  VFW  ++ F+ + +  +    L  ++++  L M+IKI +N   + S L+    LE     ++  LSI++   +L S  ++F YG  +  D ++ R         N   +I GSN             +  + +  IE  + +     ++ +   +  I++K P ++ S K +Y   +  + L ++++S LY+VS +I+W    L+  W+
Sbjct:    4 CKKLWDIWFLTYLIVINLYLTYNAILNYLNFKVNASDPVYGRNWDTNLTYLILECIIIPLGLLPVIIYTNILPVGNFANDGKSFGKDEEFFHFIL----NENGKADIVMNNKERNCCKQKFLKLIFMELPPISYVLQVVAAYCYLIPKPFMDARQIFHKVLRPNQIWHTDLDIIFD--PDHQHPEFTYYQQWSYIQPMTVAYFNFGFSLFLLSIQYSRVFWNVSKTFTLVLSFLMLTFSLHLLVEYCSLSMMIKIIENPLIVSSSLR----LELSVFTVL-FLSILANFVLLFSFTTVFHYGILQYGDIMLHRHRRYRRQILNSSPHIVGSNQLDMSGPFSPCASENNYSESSIEPIFSKSHYSHILAVCFLVVVIVIKSPVIHSSFKHIYYFTSDSLTLVHMLISCLYVVSWLIVWFAFALRRTWN 419
[Close]
BLAST of SMED30016314 vs. Planmine SMEST
Match: SMESG000077784.1 (SMESG000077784.1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.475e-20
Identity = 139/574 (24.22%), Postives = 244/574 (42.51%), Query Frame = 2 
Query:   89 CSKLSRTWLFIWLIGISTYLSVKSVKRYLKIKTWQFETAEKREFSNGILTMYLTXXXXXXXXXLCCVFCILVKTGNYANDSAKFGVKSLDFKTLRIKLHREEMDSQFIQANRKRRSQFWIRMKHHFPAFYCCFYFVMSFSFISVLPYVESEEIRMDLEHQRNIWFTNLDVM-----FNTYPMN---------DDPSRIAPISPEFFNICISLIVHAFSYGSVFWKFNRYFSFIFTVFVFINGLLFILDFGLLEMLIKISKNADSLKSLLKNSEQLEFQWTPLISLLSIMSYLFMLVSQLSLFEYGYNRVKDALIKRP---SNDMNDNCPTYINGSNVSTKVQYAWKQLCIESWGQIMKLFVIGIIATIFSILVKLPYLYKSMKILYTNRNSDI---VLTNVVVSILYLVSTVILWTYLILKSNWSIH-NYR-DPIPAMNGECNMFIPKP------------SNEIITIPVY-ASVNRHPPSSPPVDQEPNLPLFCDKMATQWRYSCSPASCAPNDSNSNSDRTVSGKNQDIGNKKNYIYLSRINPGMDSPNFSQGIYSQLVKLTPQLSLTDNMM 1705
            C +L + W  I +I +   L   ++  YL  K+  F+      +S   L   L SI++ +S  +  ++  + K G+ AND    G   LD  +++  L  EE+ S       K    F  R+  H   + C  +  ++      +  +++E+I+ +      IW TN+D +     F  +  N         + P++ + I+PEF N+ ISL++      S FW  N+ FS +F++F FI     ++++  L ++IKI  N D    L    E     W  LI ++ ++  L M+   + +FEYGY +    + K     S+D++D+        N     QY W  +            + GI+  +   ++K+P LY  +  L  N    I   +L ++ +S+ Y +S + LW  L +K+ W  H N + +P+P +        P+P            S   I+ P+  +S++    SS  ++Q  N  L    M    R      +   N   S+     + K+ D G+ K      RI   + +   SQ  Y+ L  L P + LT   M
Sbjct:   11 CDRLWKLWYSILIIVMQVLLISLAISNYLTYKSQSFDPRFGNHWSALPLNFQLASIVLSLSLLVWLIYSCMFKVGHIANDGIVLG---LDLDSIKKAL--EEISS------YKGIKLFLTRLITHVLPYNCFIHLSIALLLCLPVALMQAEQIKNEAISPDYIWTTNIDFLISPHSFRIFKANTVICYKLPCEYPTKPSAIAPEFINLIISLLIIVIRLPSPFWYTNKAFSILFSIFAFITVSCILMEYESLILIIKIIHNYD----LDTKIESHLSVW--LILIIFLIKSLLMIFMLIIIFEYGYTQFISNMRKYRQYFSSDISDSVSQQSLNDN-----QYKWYNVSPR---------IFGILILVIVKILKIPILYVQISYLKINGKISIHPLILISICISLFYFLSCLFLWFGLCVKNKWQFHINIQTNPLPQIGVGKLKSSPEPIYGCFYNAASGSSQTSISKPMLRSSIDGSDVSSHKMNQSANYVLMHSGMNPAMRVLPINENLEFNAGESDVSFESNSKSYDSGDNK----YKRIPYAIQNIENSQ--YATLTSLQPGVLLTAKSM 547
The following BLAST results are available for this feature:
BLAST of SMED30016314 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30016314 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
K09F5.62.893e-1120.97pep chromosome:WBcel235:X:7719272:7725583:1 gene:W... [more]
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BLAST of SMED30016314 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30016314 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30016314 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30016314 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30016314 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30016314 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A267GLJ31.182e-2024.70Uncharacterized protein (Fragment) OS=Macrostomum ... [more]
A0A267E6698.834e-2024.46Uncharacterized protein (Fragment) OS=Macrostomum ... [more]
A0A267H7U19.065e-2024.70Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A1I8HYR53.218e-1823.50Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A1I8IPE75.264e-1724.11Uncharacterized protein OS=Macrostomum lignano OX=... [more]
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BLAST of SMED30016314 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30016314 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30016314 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30016314 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30016314 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30016314 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000011577.10.000e+099.84SMESG000011577.1[more]
SMESG000008310.18.733e-3125.78SMESG000008310.1[more]
SMESG000008310.11.854e-2425.21SMESG000008310.1[more]
SMESG000051307.12.967e-2322.72SMESG000051307.1[more]
SMESG000077784.11.475e-2024.22SMESG000077784.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30016314 ID=SMED30016314|Name=SMED30016314|organism=Schmidtea mediterranea sexual|type=transcript|length=2110bp
TTTTCCTTAAATTGTTAATCATTACCAACCAATCAGTTTTCAATTAAATG
AGCCAATCAAATTAATCGACGCAATGAAATTGCTCTTATGTTCTAAGCTT
TCTCGAACGTGGCTTTTTATTTGGCTTATCGGCATCAGTACATATCTGTC
GGTGAAATCCGTGAAGCGATATCTAAAAATCAAAACATGGCAATTCGAAA
CCGCTGAAAAAAGGGAATTCAGCAATGGAATATTGACAATGTATTTGACT
TCGATTATTATTGGAATTTCATCGTCGTTATGCTGTGTGTTTTGCATATT
GGTCAAAACTGGAAATTACGCGAACGACTCAGCGAAATTCGGAGTAAAGT
CTCTCGATTTCAAAACTCTAAGAATCAAGTTGCACAGAGAGGAAATGGAC
AGCCAGTTTATTCAAGCCAATCGCAAAAGGCGTTCTCAATTCTGGATTAG
AATGAAGCATCATTTTCCCGCTTTTTATTGCTGCTTTTATTTTGTCATGA
GTTTTTCTTTTATATCTGTTTTACCATATGTTGAATCGGAAGAAATTAGA
ATGGATTTAGAACATCAAAGAAATATTTGGTTTACAAATCTGGATGTCAT
GTTTAATACTTATCCCATGAACGATGATCCTTCCCGTATTGCTCCCATAA
GTCCTGAATTTTTCAATATTTGCATCAGTTTAATTGTTCATGCTTTTTCT
TATGGAAGTGTTTTTTGGAAATTTAATCGCTATTTTTCATTCATTTTCAC
TGTTTTCGTTTTCATTAATGGATTACTGTTCATTTTGGATTTTGGTCTCC
TTGAAATGCTTATTAAAATATCAAAAAACGCAGACTCGCTAAAGAGTTTA
CTTAAGAACTCAGAACAATTAGAATTCCAATGGACTCCATTAATTAGTCT
TCTATCAATAATGAGTTATTTATTTATGTTAGTCTCTCAATTATCCTTGT
TTGAATATGGTTACAACCGAGTGAAAGATGCTTTGATAAAGAGACCATCA
AATGACATGAATGATAACTGTCCAACTTATATAAATGGTAGCAATGTTTC
AACAAAAGTCCAGTATGCGTGGAAACAATTGTGCATTGAATCATGGGGTC
AGATCATGAAGCTTTTTGTCATTGGAATCATTGCAACGATTTTTAGTATA
CTAGTCAAACTGCCTTACCTCTATAAAAGTATGAAAATCCTTTATACGAA
TAGGAACAGTGATATTGTTCTGACGAATGTGGTGGTGTCGATCTTATATT
TGGTGTCAACTGTCATTTTGTGGACATACCTTATTCTTAAATCAAATTGG
TCAATTCATAATTACCGCGATCCGATTCCAGCGATGAATGGTGAATGCAA
TATGTTTATTCCGAAACCGAGCAATGAAATAATAACTATTCCGGTTTATG
CTTCGGTGAATCGGCATCCTCCATCCTCGCCTCCAGTCGATCAAGAACCA
AATCTTCCGTTATTCTGTGACAAAATGGCAACTCAATGGCGTTATTCTTG
TTCGCCGGCTTCGTGTGCACCAAATGATAGCAACAGCAATAGCGACAGAA
CAGTAAGCGGAAAGAATCAAGATATTGGGAATAAAAAGAATTATATTTAT
TTATCAAGAATCAATCCCGGCATGGATTCACCAAATTTTAGTCAAGGAAT
CTATTCCCAGCTGGTAAAGCTTACCCCACAATTAAGCTTGACGGACAATA
TGATGGAGACCGATAATACAGCCGTCCCAATTGCTTTGTCGAATGAAGCC
TCAGATAATTCCAGTAACCAAACAGTCCATATTATTGGTCCGAGCTCGAC
AGATTTATCGAGGTGTACAATTGAACGAGCAAGCATAAGAAATCGGCCGG
AGATCAATTCAGAAATCGCGCCCCCCGAATATTTCAATATAATATCAACC
AATTCACCATTAATAATAACAAGACATATTTACGAGCAAACGCAGTCCAG
TAACGCAGATGCCGAATCGAATAATCTTTGTACTCAAGTTTGAGATCATA
TAAATCTTCTTAGATTATTTATTTTGACAGCGAATGTTTCATTTTTGTTT
ACATTTTATTAAATCATTGTCAAATTATAGATAGAAATACAAATTACATG
TTAAAAAAAA
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protein sequence of SMED30016314-orf-1

>SMED30016314-orf-1 ID=SMED30016314-orf-1|Name=SMED30016314-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=640bp
MKLLLCSKLSRTWLFIWLIGISTYLSVKSVKRYLKIKTWQFETAEKREFS
NGILTMYLTSIIIGISSSLCCVFCILVKTGNYANDSAKFGVKSLDFKTLR
IKLHREEMDSQFIQANRKRRSQFWIRMKHHFPAFYCCFYFVMSFSFISVL
PYVESEEIRMDLEHQRNIWFTNLDVMFNTYPMNDDPSRIAPISPEFFNIC
ISLIVHAFSYGSVFWKFNRYFSFIFTVFVFINGLLFILDFGLLEMLIKIS
KNADSLKSLLKNSEQLEFQWTPLISLLSIMSYLFMLVSQLSLFEYGYNRV
KDALIKRPSNDMNDNCPTYINGSNVSTKVQYAWKQLCIESWGQIMKLFVI
GIIATIFSILVKLPYLYKSMKILYTNRNSDIVLTNVVVSILYLVSTVILW
TYLILKSNWSIHNYRDPIPAMNGECNMFIPKPSNEIITIPVYASVNRHPP
SSPPVDQEPNLPLFCDKMATQWRYSCSPASCAPNDSNSNSDRTVSGKNQD
IGNKKNYIYLSRINPGMDSPNFSQGIYSQLVKLTPQLSLTDNMMETDNTA
VPIALSNEASDNSSNQTVHIIGPSSTDLSRCTIERASIRNRPEINSEIAP
PEYFNIISTNSPLIITRHIYEQTQSSNADAESNNLCTQV*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000028Category 2 cell
PLANA:0000101muscle cell
PLANA:0002028dorsal-ventral muscle cell
Vocabulary: cellular component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21579FAMILY NOT NAMEDcoord: 8..560
NoneNo IPR availableTMHMMTMhelixcoord: 270..292
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 192..214
NoneNo IPR availableTMHMMTMhelixcoord: 381..403
NoneNo IPR availableTMHMMTMhelixcoord: 221..243
NoneNo IPR availableTMHMMTMhelixcoord: 344..366
NoneNo IPR availableTMHMMTMhelixcoord: 13..30
NoneNo IPR availableTMHMMTMhelixcoord: 131..153